(Circular) (Six-base) MAPSORT of: pF1KB0945.seq Check: 6076 from: 1 to: 3623 pF1KB0945 3623 bp With 182 enzymes: SgfI * October 7, 2009 14:15 .. AccI GT'mk_AC Cuts at: 317 506 661 317 Size: 189 155 3279 Fragments arranged by size: 3279 189 155 Acc65I G'GTAC_C Cuts at: 639 639 Size: 3623 AclI AA'CG_TT Cuts at: 3463 3463 Size: 3623 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 1448 1880 2627 2895 1448 Size: 432 747 268 2176 Fragments arranged by size: 2176 747 432 268 AflIII A'CryG_T Cuts at: 975 2079 3056 975 Size: 1104 977 1542 Fragments arranged by size: 1542 1104 977 AgeI A'CCGG_T Cuts at: 2011 2011 Size: 3623 AlwNI CAG_nnn'CTG Cuts at: 928 2495 928 Size: 1567 2056 ApaLI G'TGCA_C Cuts at: 2393 2393 Size: 3623 ApoI r'AATT_y Cuts at: 328 562 627 2976 3232 328 Size: 234 65 2349 256 719 Fragments arranged by size: 2349 719 256 234 65 AseI AT'TA_AT Cuts at: 20 20 Size: 3623 AsiSI GCG_AT'CGC Cuts at: 104 104 Size: 3623 AvaI C'yCGr_G Cuts at: 643 643 Size: 3623 BamHI G'GATC_C Cuts at: 648 648 Size: 3623 BanI G'GyrC_C Cuts at: 639 1053 1301 1336 639 Size: 414 248 35 2926 Fragments arranged by size: 2926 414 248 35 BanII G_rGCy'C Cuts at: 637 1667 637 Size: 1030 2593 BbeI G_GCGC'C Cuts at: 1057 1305 1057 Size: 248 3375 BciVI GTATCCnnnnn_n' Cuts at: 1521 2282 3623 1521 Size: 761 1341 1521 Fragments arranged by size: 1521 1341 761 BclI T'GATC_A Cuts at: 1143 1143 Size: 3623 BglII A'GATC_T Cuts at: 1138 3175 1138 Size: 2037 1586 BlpI GC'TnA_GC Cuts at: 735 735 Size: 3623 Bme1580I G_kGCm'C Cuts at: 1248 1341 2397 1248 Size: 93 1056 2474 Fragments arranged by size: 2474 1056 93 BmrI ACTGGGnnnn_n' Cuts at: 835 916 1251 3395 835 Size: 81 335 2144 1063 Fragments arranged by size: 2144 1063 335 81 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 360 1990 360 Size: 1630 1993 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 799 1678 2170 2468 799 Size: 879 492 298 1954 Fragments arranged by size: 1954 879 492 298 BsaI GGTCTCn'nnnn_ Cuts at: 3327 3327 Size: 3623 BsaAI yAC'GTr Cuts at: 976 976 Size: 3623 BsaBI GATnn'nnATC Cuts at: 6 1137 3174 6 Size: 1131 2037 455 Fragments arranged by size: 2037 1131 455 BsaHI Gr'CG_yC Cuts at: 341 1054 1302 2004 3500 341 Size: 713 248 702 1496 464 Fragments arranged by size: 1496 713 702 464 248 BsaWI w'CCGG_w Cuts at: 812 1333 2011 2285 2432 2843 812 Size: 521 678 274 147 411 1592 Fragments arranged by size: 1592 678 521 411 274 147 BseYI C'CCAG_C Cuts at: 1048 1806 2383 2879 1048 Size: 758 577 496 1792 Fragments arranged by size: 1792 758 577 496 BsiEI CG_ry'CG Cuts at: 104 1165 1211 2419 104 Size: 1061 46 1208 1308 Fragments arranged by size: 1308 1208 1061 46 BsiHKAI G_wGCw'C Cuts at: 145 637 1415 1605 2397 145 Size: 492 778 190 792 1371 Fragments arranged by size: 1371 792 778 492 190 BsmBI CGTCTCn'nnnn_ Cuts at: 348 348 Size: 3623 Bsp1286I G_dGCh'C Cuts at: 145 637 1248 1341 1415 1605 1667 2397 145 Size: 492 611 93 74 190 62 730 1371 Fragments arranged by size: 1371 730 611 492 190 93 74 62 BspEI T'CCGG_A Cuts at: 2843 2843 Size: 3623 BspHI T'CATG_A Cuts at: 2799 2799 Size: 3623 BspMI ACCTGCnnnn'nnnn_ Cuts at: 673 887 1189 1570 673 Size: 214 302 381 2726 Fragments arranged by size: 2726 381 302 214 BsrBI CCG'CTC Cuts at: 50 1915 1969 3453 3618 50 Size: 1865 54 1484 165 55 Fragments arranged by size: 1865 1484 165 55 54 BsrDI GCAATG_nn' Cuts at: 1535 1535 Size: 3623 BsrFI r'CCGG_y Cuts at: 1621 1802 2011 1621 Size: 181 209 3233 Fragments arranged by size: 3233 209 181 BssSI C'ACGA_G Cuts at: 1894 2252 1894 Size: 358 3265 BstAPI GCAn_nnn'nTGC Cuts at: 1000 1000 Size: 3623 BstBI TT'CG_AA Cuts at: 1984 1984 Size: 3623 BstYI r'GATC_y Cuts at: 1 648 1115 1138 1473 1719 2731 2817 2829 Size: 647 467 23 335 246 1012 86 12 Cuts at: 2829 3175 1 Size: 346 449 Fragments arranged by size: 1012 647 467 449 346 335 246 86 23 12 BtgI C'CryG_G Cuts at: 107 107 Size: 3623 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 1573 1754 1917 1573 Size: 181 163 3279 Fragments arranged by size: 3279 181 163 BtsI GCAGTG_nn' Cuts at: 866 866 Size: 3623 DraI TTT'AAA Cuts at: 324 622 324 Size: 298 3325 DrdI GACnn_nn'nnGTC Cuts at: 1329 2187 1329 Size: 858 2765 EaeI y'GGCC_r Cuts at: 1208 1382 1773 1800 3145 1208 Size: 174 391 27 1345 1686 Fragments arranged by size: 1686 1345 391 174 27 EagI C'GGCC_G Cuts at: 1208 1208 Size: 3623 EarI CTCTTCn'nnn_ Cuts at: 224 448 1646 1856 224 Size: 224 1198 210 1991 Fragments arranged by size: 1991 1198 224 210 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 1831 2141 2287 3433 1831 Size: 310 146 1146 2021 Fragments arranged by size: 2021 1146 310 146 EcoICRI GAG'CTC Cuts at: 635 635 Size: 3623 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 1448 1880 2627 2895 1448 Size: 432 747 268 2176 Fragments arranged by size: 2176 747 432 268 EcoO109I rG'GnC_Cy Cuts at: 762 762 Size: 3623 EcoRI G'AATT_C Cuts at: 328 562 627 328 Size: 234 65 3324 Fragments arranged by size: 3324 234 65 EcoRV GAT'ATC Cuts at: 591 591 Size: 3623 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 146 1642 146 Size: 1496 2127 FspI TGC'GCA Cuts at: 1404 1404 Size: 3623 HaeII r_GCGC'y Cuts at: 1057 1305 2327 3306 1057 Size: 248 1022 979 1374 Fragments arranged by size: 1374 1022 979 248 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 223 255 1465 1495 1497 1527 223 Size: 32 1210 30 2 30 2319 Fragments arranged by size: 2319 1210 32 30 30 2 HincII GTy'rAC Cuts at: 662 662 Size: 3623 HindIII A'AGCT_T Cuts at: 193 193 Size: 3623 KasI G'GCGC_C Cuts at: 1053 1301 1053 Size: 248 3375 KpnI G_GTAC'C Cuts at: 643 643 Size: 3623 MluI A'CGCG_T Cuts at: 3056 3056 Size: 3623 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 2294 2478 2294 Size: 184 3439 MscI TGG'CCA Cuts at: 1384 1384 Size: 3623 MslI CAynn'nnrTG Cuts at: 152 1612 1739 152 Size: 1460 127 2036 Fragments arranged by size: 2036 1460 127 MspA1I CmG'CkG Cuts at: 734 1048 1408 2421 2666 734 Size: 314 360 1013 245 1691 Fragments arranged by size: 1691 1013 360 314 245 NaeI GCC'GGC Cuts at: 1804 1804 Size: 3623 NarI GG'CG_CC Cuts at: 1054 1302 1054 Size: 248 3375 NcoI C'CATG_G Cuts at: 107 107 Size: 3623 NgoMIV G'CCGG_C Cuts at: 1802 1802 Size: 3623 NspI r_CATG'y Cuts at: 676 1176 2083 676 Size: 500 907 2216 Fragments arranged by size: 2216 907 500 PciI A'CATG_T Cuts at: 2079 2079 Size: 3623 PmeI GTTT'AAAC Cuts at: 622 622 Size: 3623 PpiI GAACnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 2762 2794 2762 Size: 32 3591 PstI C_TGCA'G Cuts at: 670 1355 670 Size: 685 2938 PvuI CG_AT'CG Cuts at: 104 104 Size: 3623 PvuII CAG'CTG Cuts at: 1048 1408 1048 Size: 360 3263 RsrII CG'GwC_CG Cuts at: 1818 1818 Size: 3623 SacI G_AGCT'C Cuts at: 637 637 Size: 3623 SalI G'TCGA_C Cuts at: 660 660 Size: 3623 SapI GCTCTTCn'nnn_ Cuts at: 1646 1856 1646 Size: 210 3413 SbfI CC_TGCA'GG Cuts at: 670 670 Size: 3623 ScaI AGT'ACT Cuts at: 3140 3140 Size: 3623 SfcI C'TryA_G Cuts at: 33 666 1351 2344 2535 33 Size: 633 685 993 191 1121 Fragments arranged by size: 1121 993 685 633 191 SfoI GGC'GCC Cuts at: 1055 1303 1055 Size: 248 3375 SgfI GCG_AT'CGC Cuts at: 104 104 Size: 3623 SmaI CCC'GGG Cuts at: 645 645 Size: 3623 SmlI C'TyrA_G Cuts at: 778 1693 2185 2447 778 Size: 915 492 262 1954 Fragments arranged by size: 1954 915 492 262 SpeI A'CTAG_T Cuts at: 67 67 Size: 3623 SphI G_CATG'C Cuts at: 676 1176 676 Size: 500 3123 StyI C'CwwG_G Cuts at: 107 757 1111 107 Size: 650 354 2619 Fragments arranged by size: 2619 650 354 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 1206 1339 1798 2007 1206 Size: 133 459 209 2822 Fragments arranged by size: 2822 459 209 133 TatI w'GTAC_w Cuts at: 270 3138 270 Size: 2868 755 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 3140 3172 3140 Size: 32 3591 Tth111I GACn'n_nGTC Cuts at: 1420 1420 Size: 3623 XbaI T'CTAG_A Cuts at: 654 654 Size: 3623 XcmI CCAnnnn_n'nnnnTGG Cuts at: 1118 1118 Size: 3623 XmaI C'CCGG_G Cuts at: 643 643 Size: 3623 Enzymes that do cut: AccI Acc65I AclI AcuI AflIII AgeI AlwNI ApaLI ApoI AseI AsiSI AvaI BamHI BanI BanII BbeI BciVI BclI BglII BlpI Bme1580I BmrI BplI BpuEI BsaI BsaAI BsaBI BsaHI BsaWI BseYI BsiEI BsiHKAI BsmBI Bsp1286I BspEI BspHI BspMI BsrBI BsrDI BsrFI BssSI BstAPI BstBI BstYI BtgI BtgZI BtsI DraI DrdI EaeI EagI EarI EciI EcoICRI Eco57MI EcoO109I EcoRI EcoRV FalI FspI HaeII Hin4I HincII HindIII KasI KpnI MluI MmeI MscI MslI MspA1I NaeI NarI NcoI NgoMIV NspI PciI PmeI PpiI PstI PvuI PvuII RsrII SacI SalI SapI SbfI ScaI SfcI SfoI SgfI SmaI SmlI SpeI SphI StyI TaqII TatI TstI Tth111I XbaI XcmI XmaI Enzymes that do not cut: AarI AatII AfeI AflII AhdI AleI AlfI AloI ApaI AscI AvrII BaeI BbsI BbvCI BcgI BfrBI BglI BmgBI BmtI BpmI Bpu10I BsaXI BseRI BsgI BsiWI BsmI BsrGI BssHII BstEII BstXI BstZ17I Bsu36I ClaI CspCI DraIII EcoNI FseI FspAI HpaI MfeI NdeI NheI NotI NruI NsiI PacI PasI PflMI PfoI PmlI PpuMI PshAI PsiI PspOMI PspXI PsrI SacII SanDI SexAI SfiI SgrAI SnaBI SrfI SspI StuI SwaI XhoI XmnI ZraI