FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB0950, 407 aa
  1>>>pF1KB0950 407 - 407 aa - 407 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.4046+/-0.000791; mu= 8.6532+/- 0.047
 mean_var=158.6809+/-31.857, 0's: 0 Z-trim(114.1): 8  B-trim: 70 in 1/51
 Lambda= 0.101815
 statistics sampled from 14674 (14678) to 14674 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.786), E-opt: 0.2 (0.451), width:  16
 Scan time:  3.430

The best scores are:                                      opt bits E(32554)
CCDS12567.1 EGLN2 gene_id:112398|Hs108|chr19       ( 407) 2845 429.4 2.9e-120
CCDS1595.1 EGLN1 gene_id:54583|Hs108|chr1          ( 426) 1147 180.0 3.7e-45
CCDS9646.1 EGLN3 gene_id:112399|Hs108|chr14        ( 239) 1002 158.5 6.1e-39
CCDS76671.1 EGLN3 gene_id:112399|Hs108|chr14       ( 145)  662 108.4 4.5e-24


>>CCDS12567.1 EGLN2 gene_id:112398|Hs108|chr19            (407 aa)
 initn: 2845 init1: 2845 opt: 2845  Z-score: 2272.5  bits: 429.4 E(32554): 2.9e-120
Smith-Waterman score: 2845; 100.0% identity (100.0% similar) in 407 aa overlap (1-407:1-407)

               10        20        30        40        50        60
pF1KB0 MDSPCQPQPLSQALPQLPGSSSEPLEPEPGRARMGVESYLPCPLLPSYHCPGVPSEASAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MDSPCQPQPLSQALPQLPGSSSEPLEPEPGRARMGVESYLPCPLLPSYHCPGVPSEASAG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 SGTPRATATSTTASPLRDGFGGQDGGELRPLQSEGAAALVTKGCQRLAAQGARPEAPKRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 SGTPRATATSTTASPLRDGFGGQDGGELRPLQSEGAAALVTKGCQRLAAQGARPEAPKRK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB0 WAEDGGDAPSPSKRPWARQENQEAEREGGMSCSCSSGSGEASAGLMEEALPSAPERLALD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 WAEDGGDAPSPSKRPWARQENQEAEREGGMSCSCSSGSGEASAGLMEEALPSAPERLALD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB0 YIVPCMRYYGICVKDSFLGAALGGRVLAEVEALKRGGRLRDGQLVSQRAIPPRSIRGDQI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 YIVPCMRYYGICVKDSFLGAALGGRVLAEVEALKRGGRLRDGQLVSQRAIPPRSIRGDQI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB0 AWVEGHEPGCRSIGALMAHVDAVIRHCAGRLGSYVINGRTKAMVACYPGNGLGYVRHVDN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 AWVEGHEPGCRSIGALMAHVDAVIRHCAGRLGSYVINGRTKAMVACYPGNGLGYVRHVDN
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB0 PHGDGRCITCIYYLNQNWDVKVHGGLLQIFPEGRPVVANIEPLFDRLLIFWSDRRNPHEV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 PHGDGRCITCIYYLNQNWDVKVHGGLLQIFPEGRPVVANIEPLFDRLLIFWSDRRNPHEV
              310       320       330       340       350       360

              370       380       390       400       
pF1KB0 KPAYATRYAITVWYFDAKERAAAKDKYQLASGQKGVQVPVSQPPTPT
       :::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 KPAYATRYAITVWYFDAKERAAAKDKYQLASGQKGVQVPVSQPPTPT
              370       380       390       400       

>>CCDS1595.1 EGLN1 gene_id:54583|Hs108|chr1               (426 aa)
 initn: 1109 init1: 1079 opt: 1147  Z-score: 924.3  bits: 180.0 E(32554): 3.7e-45
Smith-Waterman score: 1158; 50.7% identity (70.4% similar) in 371 aa overlap (35-403:60-417)

           10        20        30        40        50        60    
pF1KB0 CQPQPLSQALPQLPGSSSEPLEPEPGRARMGVESYLPCPLLPSYHCPGVPSEASAGSGTP
                                     : :. :   . :  :   .:    :.   :
CCDS15 LLRCSRCRSSFYCCKEHQRQDWKKHKLVCQGSEGALGHGVGPHQHSGPAP---PAAVPPP
      30        40        50        60        70           80      

           70         80         90       100       110       120  
pF1KB0 RATATSTT-ASPLRDGFGGQDG-GELRPLQSEGAAALVTKGCQRLAAQGARPEAPKRKWA
       :: :     :.  ::. .:. . :...       :: ..  :.  :: :..  :   . :
CCDS15 RAGAREPRKAAARRDNASGDAAKGKVKAKPPADPAAAASP-CR--AAAGGQGSAVAAE-A
         90       100       110       120          130       140   

            130       140       150       160       170       180  
pF1KB0 EDGGDAPSPSKRPWARQENQEAEREGGMSCSCSSGSGEASAGLMEEALPSAPERLALDYI
       : : . : :..    ... .     .  . . : :.:    : . . ::.   .:::.::
CCDS15 EPGKEEP-PARSSLFQEKANLYPPSNTPGDALSPGGGLRPNG-QTKPLPAL--KLALEYI
             150       160       170       180        190          

            190       200       210       220       230       240  
pF1KB0 VPCMRYYGICVKDSFLGAALGGRVLAEVEALKRGGRLRDGQLVSQRAIPPRSIRGDQIAW
       ::::  .:::: :.:::   : ..  ::.::.  :.. :::::::..   ..::::.:.:
CCDS15 VPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITW
      200       210       220       230       240       250        

            250       260       270       280       290       300  
pF1KB0 VEGHEPGCRSIGALMAHVDAVIRHCAGRLGSYVINGRTKAMVACYPGNGLGYVRHVDNPH
       .::.::::..:: ::. .: .:::: :.:::: :::::::::::::::: :::::::::.
CCDS15 IEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPN
      260       270       280       290       300       310        

            310       320       330       340       350       360  
pF1KB0 GDGRCITCIYYLNQNWDVKVHGGLLQIFPEGRPVVANIEPLFDRLLIFWSDRRNPHEVKP
       :::::.:::::::..::.:: ::.:.:::::.   :.::: :::::.:::::::::::.:
CCDS15 GDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQP
      320       330       340       350       360       370        

            370       380       390       400            
pF1KB0 AYATRYAITVWYFDAKERAAAKDKYQLASGQKGVQVPVSQPPTPT     
       ::::::::::::::: ::: :: ::   .:.:::.: ...:         
CCDS15 AYATRYAITVWYFDADERARAKVKYL--TGEKGVRVELNKPSDSVGKDVF
      380       390       400         410       420      

>>CCDS9646.1 EGLN3 gene_id:112399|Hs108|chr14             (239 aa)
 initn: 1025 init1: 820 opt: 1002  Z-score: 812.6  bits: 158.5 E(32554): 6.1e-39
Smith-Waterman score: 1002; 61.9% identity (86.0% similar) in 215 aa overlap (175-388:12-226)

          150       160       170       180       190       200    
pF1KB0 EREGGMSCSCSSGSGEASAGLMEEALPSAPERLALDYIVPCMRYYGICVKDSFLGAALGG
                                     :..::.:::::..  :.:  :.::: ..: 
CCDS96                    MPLGHIMRLDLEKIALEYIVPCLHEVGFCYLDNFLGEVVGD
                                  10        20        30        40 

          210       220        230       240       250       260   
pF1KB0 RVLAEVEALKRGGRLRDGQLVSQRA-IPPRSIRGDQIAWVEGHEPGCRSIGALMAHVDAV
        :: .:. :.  : ::::::.. :: .  : .:::::.:. :.: ::..:. :.. .: .
CCDS96 CVLERVKQLHCTGALRDGQLAGPRAGVSKRHLRGDQITWIGGNEEGCEAISFLLSLIDRL
              50        60        70        80        90       100 

           270       280       290       300       310       320   
pF1KB0 IRHCAGRLGSYVINGRTKAMVACYPGNGLGYVRHVDNPHGDGRCITCIYYLNQNWDVKVH
       . .:..:::.: .. :.::::::::::: :::::::::.:::::::::::::.:::.:.:
CCDS96 VLYCGSRLGKYYVKERSKAMVACYPGNGTGYVRHVDNPNGDGRCITCIYYLNKNWDAKLH
             110       120       130       140       150       160 

           330       340       350       360       370       380   
pF1KB0 GGLLQIFPEGRPVVANIEPLFDRLLIFWSDRRNPHEVKPAYATRYAITVWYFDAKERAAA
       ::.:.:::::.  .:..::.:::::.:::::::::::.:.::::::.:::::::.::: :
CCDS96 GGILRIFPEGKSFIADVEPIFDRLLFFWSDRRNPHEVQPSYATRYAMTVWYFDAEERAEA
             170       180       190       200       210       220 

           390       400       
pF1KB0 KDKYQLASGQKGVQVPVSQPPTPT
       : :..                   
CCDS96 KKKFRNLTRKTESALTED      
             230               

>>CCDS76671.1 EGLN3 gene_id:112399|Hs108|chr14            (145 aa)
 initn: 716 init1: 655 opt: 662  Z-score: 545.6  bits: 108.4 E(32554): 4.5e-24
Smith-Waterman score: 662; 73.9% identity (92.2% similar) in 115 aa overlap (274-388:18-132)

           250       260       270       280       290       300   
pF1KB0 EGHEPGCRSIGALMAHVDAVIRHCAGRLGSYVINGRTKAMVACYPGNGLGYVRHVDNPHG
                                     :..    .:::::::::: :::::::::.:
CCDS76              MPLGHIMRLDLEKIALEYIVPCLHEAMVACYPGNGTGYVRHVDNPNG
                            10        20        30        40       

           310       320       330       340       350       360   
pF1KB0 DGRCITCIYYLNQNWDVKVHGGLLQIFPEGRPVVANIEPLFDRLLIFWSDRRNPHEVKPA
       ::::::::::::.:::.:.:::.:.:::::.  .:..::.:::::.:::::::::::.:.
CCDS76 DGRCITCIYYLNKNWDAKLHGGILRIFPEGKSFIADVEPIFDRLLFFWSDRRNPHEVQPS
        50        60        70        80        90       100       

           370       380       390       400       
pF1KB0 YATRYAITVWYFDAKERAAAKDKYQLASGQKGVQVPVSQPPTPT
       ::::::.:::::::.::: :: :..                   
CCDS76 YATRYAMTVWYFDAEERAEAKKKFRNLTRKTESALTED      
       110       120       130       140           




407 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 17:25:39 2016 done: Sat Nov  5 17:25:39 2016
 Total Scan time:  3.430 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]