Result of FASTA (omim) for
pF1KB0953
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB0953, 184 aa
1>>>pF1KB0953 184 - 184 aa - 184 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1172+/-0.000405; mu= 13.9411+/- 0.026
mean_var=77.4901+/-16.591, 0's: 0 Z-trim(114.2): 226 B-trim: 2123 in 3/47
Lambda= 0.145697
statistics sampled from 23548 (23938) to 23548 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.662), E-opt: 0.2 (0.281), width: 16
Scan time: 5.830
The best scores are: opt bits E(85289)
NP_001658 (OMIM: 601175) ADP-ribosylation factor-l ( 184) 1218 265.2 4.3e-71
NP_001186674 (OMIM: 601175) ADP-ribosylation facto ( 157) 748 166.3 2.1e-41
NP_004302 (OMIM: 604695) ADP-ribosylation factor-l ( 182) 663 148.5 5.5e-36
XP_016871749 (OMIM: 604695) PREDICTED: ADP-ribosyl ( 182) 663 148.5 5.5e-36
XP_005268913 (OMIM: 103190) PREDICTED: ADP-ribosyl ( 181) 561 127.1 1.6e-29
NP_001650 (OMIM: 103190) ADP-ribosylation factor 3 ( 181) 561 127.1 1.6e-29
NP_001019397 (OMIM: 103180) ADP-ribosylation facto ( 181) 553 125.4 5e-29
NP_001649 (OMIM: 103180) ADP-ribosylation factor 1 ( 181) 553 125.4 5e-29
NP_001019399 (OMIM: 103180) ADP-ribosylation facto ( 181) 553 125.4 5e-29
NP_001019398 (OMIM: 103180) ADP-ribosylation facto ( 181) 553 125.4 5e-29
NP_001651 (OMIM: 601177) ADP-ribosylation factor 4 ( 180) 547 124.1 1.2e-28
NP_001653 (OMIM: 103188) ADP-ribosylation factor 5 ( 180) 547 124.1 1.2e-28
NP_001654 (OMIM: 600464) ADP-ribosylation factor 6 ( 175) 528 120.1 1.9e-27
NP_001168 (OMIM: 603425) ADP-ribosylation factor-l ( 181) 498 113.8 1.5e-25
XP_005248554 (OMIM: 601747) PREDICTED: E3 ubiquiti ( 398) 495 113.5 4.2e-25
NP_001647 (OMIM: 601747) E3 ubiquitin-protein liga ( 574) 495 113.6 5.6e-25
NP_848930 (OMIM: 608909) ADP-ribosylation factor-l ( 179) 489 111.9 5.6e-25
NP_036229 (OMIM: 608960) ADP-ribosylation factor-l ( 179) 484 110.9 1.2e-24
NP_079323 (OMIM: 614439) ADP-ribosylation factor-l ( 192) 476 109.2 3.9e-24
XP_005266310 (OMIM: 609351) PREDICTED: ADP-ribosyl ( 196) 452 104.2 1.3e-22
NP_612459 (OMIM: 609351) ADP-ribosylation factor-l ( 196) 452 104.2 1.3e-22
XP_016864933 (OMIM: 601747) PREDICTED: E3 ubiquiti ( 569) 449 104.0 4.5e-22
NP_150230 (OMIM: 601747) E3 ubiquitin-protein liga ( 569) 449 104.0 4.5e-22
XP_006719454 (OMIM: 103190) PREDICTED: ADP-ribosyl ( 137) 421 97.6 9.2e-21
XP_016856722 (OMIM: 103180) PREDICTED: ADP-ribosyl ( 212) 417 96.9 2.3e-20
NP_150231 (OMIM: 601747) E3 ubiquitin-protein liga ( 546) 418 97.4 4e-20
XP_005252458 (OMIM: 608909) PREDICTED: ADP-ribosyl ( 142) 409 95.0 5.4e-20
NP_878899 (OMIM: 608922,612291) ADP-ribosylation f ( 428) 414 96.5 6e-20
NP_001167621 (OMIM: 608922,612291) ADP-ribosylatio ( 428) 414 96.5 6e-20
NP_115522 (OMIM: 209900,268000,600151,608845,61357 ( 186) 404 94.1 1.4e-19
NP_001265222 (OMIM: 209900,268000,600151,608845,61 ( 186) 404 94.1 1.4e-19
NP_816931 (OMIM: 209900,268000,600151,608845,61357 ( 186) 404 94.1 1.4e-19
XP_016862800 (OMIM: 209900,268000,600151,608845,61 ( 186) 404 94.1 1.4e-19
NP_001032251 (OMIM: 608960) ADP-ribosylation facto ( 142) 398 92.7 2.7e-19
NP_817114 (OMIM: 608960) ADP-ribosylation factor-l ( 142) 398 92.7 2.7e-19
NP_001310442 (OMIM: 209900,268000,600151,608845,61 ( 193) 391 91.4 9.4e-19
NP_001652 (OMIM: 600732) ADP-ribosylation factor-l ( 201) 391 91.4 9.7e-19
XP_011523084 (OMIM: 600732) PREDICTED: ADP-ribosyl ( 201) 391 91.4 9.7e-19
NP_005728 (OMIM: 604787) ADP-ribosylation factor-l ( 192) 387 90.5 1.7e-18
NP_001287997 (OMIM: 603425) ADP-ribosylation facto ( 135) 385 90.0 1.7e-18
NP_001269360 (OMIM: 604787) ADP-ribosylation facto ( 201) 387 90.6 1.7e-18
XP_011510837 (OMIM: 608922,612291) PREDICTED: ADP- ( 403) 386 90.6 3.4e-18
XP_011526785 (OMIM: 604699) PREDICTED: ADP-ribosyl ( 201) 381 89.3 4.2e-18
XP_016883065 (OMIM: 604699) PREDICTED: ADP-ribosyl ( 201) 381 89.3 4.2e-18
NP_001254477 (OMIM: 604699) ADP-ribosylation facto ( 201) 381 89.3 4.2e-18
XP_011526784 (OMIM: 604699) PREDICTED: ADP-ribosyl ( 201) 381 89.3 4.2e-18
NP_003215 (OMIM: 604699) ADP-ribosylation factor-r ( 201) 381 89.3 4.2e-18
NP_001254476 (OMIM: 604699) ADP-ribosylation facto ( 201) 381 89.3 4.2e-18
NP_620150 (OMIM: 616597) ADP-ribosylation factor-l ( 186) 367 86.3 3e-17
NP_060654 (OMIM: 616596) ADP-ribosylation factor-l ( 186) 365 85.9 4e-17
>>NP_001658 (OMIM: 601175) ADP-ribosylation factor-like (184 aa)
initn: 1218 init1: 1218 opt: 1218 Z-score: 1397.4 bits: 265.2 E(85289): 4.3e-71
Smith-Waterman score: 1218; 100.0% identity (100.0% similar) in 184 aa overlap (1-184:1-184)
10 20 30 40 50 60
pF1KB0 MGLLTILKKMKQKERELRLLMLGLDNAGKTTILKKFNGEDIDTISPTLGFNIKTLEHRGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGLLTILKKMKQKERELRLLMLGLDNAGKTTILKKFNGEDIDTISPTLGFNIKTLEHRGF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 KLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 LIFANKQDLPGALSSNAIREVLELDSIRSHHWCIQGCSAVTGENLLPGIDWLLDDISSRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LIFANKQDLPGALSSNAIREVLELDSIRSHHWCIQGCSAVTGENLLPGIDWLLDDISSRI
130 140 150 160 170 180
pF1KB0 FTAD
::::
NP_001 FTAD
>>NP_001186674 (OMIM: 601175) ADP-ribosylation factor-li (157 aa)
initn: 766 init1: 748 opt: 748 Z-score: 864.4 bits: 166.3 E(85289): 2.1e-41
Smith-Waterman score: 990; 85.3% identity (85.3% similar) in 184 aa overlap (1-184:1-157)
10 20 30 40 50 60
pF1KB0 MGLLTILKKMKQKERELRLLMLGLDNAGKTTILKKFNGEDIDTISPTLGFNIKTLEHRGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGLLTILKKMKQKERELRLLMLGLDNAGKTTILKKFNGEDIDTISPTLGFNIKTLEHRGF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 KLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATL
:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEE-------
70 80 90 100 110
130 140 150 160 170 180
pF1KB0 LIFANKQDLPGALSSNAIREVLELDSIRSHHWCIQGCSAVTGENLLPGIDWLLDDISSRI
::::::::::::::::::::::::::::::::::::::::
NP_001 --------------------VLELDSIRSHHWCIQGCSAVTGENLLPGIDWLLDDISSRI
120 130 140 150
pF1KB0 FTAD
::::
NP_001 FTAD
>>NP_004302 (OMIM: 604695) ADP-ribosylation factor-like (182 aa)
initn: 635 init1: 594 opt: 663 Z-score: 767.0 bits: 148.5 E(85289): 5.5e-36
Smith-Waterman score: 663; 53.3% identity (83.9% similar) in 180 aa overlap (1-179:1-180)
10 20 30 40 50
pF1KB0 MGLLTILKKMKQK-ERELRLLMLGLDNAGKTTILKKFNGEDIDTISPTLGFNIKTLEHRG
::::.::.:.:. ..:.:.:.::::::::::.::.. .:::. :.:: :::::... .:
NP_004 MGLLSILRKLKSAPDQEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQG
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB0 FKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGAT
::::.::.:::...: ::.::::.:: ::.:.:::::.:... .:: :: ::.:. .
NP_004 FKLNVWDIGGQRKIRPYWKNYFENTDILIYVIDSADRKRFEETGQELAELLEEEKLSCVP
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB0 LLIFANKQDLPGALSSNAIREVLELDSIRSHHWCIQGCSAVTGENLLPGIDWLLDDISSR
.::::::::: : .. : : :.: .::.. : ::.:::.:::.. :..:. .....
NP_004 VLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAK
130 140 150 160 170 180
180
pF1KB0 IFTAD
NP_004 KK
>>XP_016871749 (OMIM: 604695) PREDICTED: ADP-ribosylatio (182 aa)
initn: 635 init1: 594 opt: 663 Z-score: 767.0 bits: 148.5 E(85289): 5.5e-36
Smith-Waterman score: 663; 53.3% identity (83.9% similar) in 180 aa overlap (1-179:1-180)
10 20 30 40 50
pF1KB0 MGLLTILKKMKQK-ERELRLLMLGLDNAGKTTILKKFNGEDIDTISPTLGFNIKTLEHRG
::::.::.:.:. ..:.:.:.::::::::::.::.. .:::. :.:: :::::... .:
XP_016 MGLLSILRKLKSAPDQEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQG
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB0 FKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGAT
::::.::.:::...: ::.::::.:: ::.:.:::::.:... .:: :: ::.:. .
XP_016 FKLNVWDIGGQRKIRPYWKNYFENTDILIYVIDSADRKRFEETGQELAELLEEEKLSCVP
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB0 LLIFANKQDLPGALSSNAIREVLELDSIRSHHWCIQGCSAVTGENLLPGIDWLLDDISSR
.::::::::: : .. : : :.: .::.. : ::.:::.:::.. :..:. .....
XP_016 VLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAK
130 140 150 160 170 180
180
pF1KB0 IFTAD
XP_016 KK
>>XP_005268913 (OMIM: 103190) PREDICTED: ADP-ribosylatio (181 aa)
initn: 533 init1: 533 opt: 561 Z-score: 651.1 bits: 127.1 E(85289): 1.6e-29
Smith-Waterman score: 561; 47.4% identity (82.9% similar) in 175 aa overlap (6-179:8-180)
10 20 30 40 50
pF1KB0 MGLLTILKKMKQKERELRLLMLGLDNAGKTTILKKFN-GEDIDTISPTLGFNIKTLEH
.::.. : .:.:.::.::: ::::::: :.. :: . :: ::.:::..:.:.
XP_005 MGNIFGNLLKSLIGK-KEMRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNVETVEY
10 20 30 40 50
60 70 80 90 100 110
pF1KB0 RGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAG
.......:::::: ..: ::.::..:.:::.:::: ::.:... ..::. .:.:..:
XP_005 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRD
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB0 ATLLIFANKQDLPGALSSNAIREVLELDSIRSHHWCIQGCSAVTGENLLPGIDWLLDDIS
:.::.::::::::.:... : . : : :.: ..: ::. :..:..: :.::: ....
XP_005 AVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLK
120 130 140 150 160 170
180
pF1KB0 SRIFTAD
..
XP_005 NKK
180
>>NP_001650 (OMIM: 103190) ADP-ribosylation factor 3 [Ho (181 aa)
initn: 533 init1: 533 opt: 561 Z-score: 651.1 bits: 127.1 E(85289): 1.6e-29
Smith-Waterman score: 561; 47.4% identity (82.9% similar) in 175 aa overlap (6-179:8-180)
10 20 30 40 50
pF1KB0 MGLLTILKKMKQKERELRLLMLGLDNAGKTTILKKFN-GEDIDTISPTLGFNIKTLEH
.::.. : .:.:.::.::: ::::::: :.. :: . :: ::.:::..:.:.
NP_001 MGNIFGNLLKSLIGK-KEMRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNVETVEY
10 20 30 40 50
60 70 80 90 100 110
pF1KB0 RGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAG
.......:::::: ..: ::.::..:.:::.:::: ::.:... ..::. .:.:..:
NP_001 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRD
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB0 ATLLIFANKQDLPGALSSNAIREVLELDSIRSHHWCIQGCSAVTGENLLPGIDWLLDDIS
:.::.::::::::.:... : . : : :.: ..: ::. :..:..: :.::: ....
NP_001 AVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLK
120 130 140 150 160 170
180
pF1KB0 SRIFTAD
..
NP_001 NKK
180
>>NP_001019397 (OMIM: 103180) ADP-ribosylation factor 1 (181 aa)
initn: 529 init1: 529 opt: 553 Z-score: 642.1 bits: 125.4 E(85289): 5e-29
Smith-Waterman score: 553; 47.9% identity (83.2% similar) in 167 aa overlap (14-179:15-180)
10 20 30 40 50
pF1KB0 MGLLTILKKMKQKERELRLLMLGLDNAGKTTILKKFN-GEDIDTISPTLGFNIKTLEHR
..:.:.::.::: ::::::: :.. :: . :: ::.:::..:.:..
NP_001 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNVETVEYK
10 20 30 40 50
60 70 80 90 100 110
pF1KB0 GFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGA
......:::::: ..: ::.::..:.:::.:::: ::.:... ..::. .:.:..: :
NP_001 NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB0 TLLIFANKQDLPGALSSNAIREVLELDSIRSHHWCIQGCSAVTGENLLPGIDWLLDDISS
.::.::::::::.:... : . : : :.: ..: ::. :..:..: :.::: ... .
NP_001 VLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRN
120 130 140 150 160 170
180
pF1KB0 RIFTAD
.
NP_001 QK
180
>>NP_001649 (OMIM: 103180) ADP-ribosylation factor 1 [Ho (181 aa)
initn: 529 init1: 529 opt: 553 Z-score: 642.1 bits: 125.4 E(85289): 5e-29
Smith-Waterman score: 553; 47.9% identity (83.2% similar) in 167 aa overlap (14-179:15-180)
10 20 30 40 50
pF1KB0 MGLLTILKKMKQKERELRLLMLGLDNAGKTTILKKFN-GEDIDTISPTLGFNIKTLEHR
..:.:.::.::: ::::::: :.. :: . :: ::.:::..:.:..
NP_001 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNVETVEYK
10 20 30 40 50
60 70 80 90 100 110
pF1KB0 GFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGA
......:::::: ..: ::.::..:.:::.:::: ::.:... ..::. .:.:..: :
NP_001 NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB0 TLLIFANKQDLPGALSSNAIREVLELDSIRSHHWCIQGCSAVTGENLLPGIDWLLDDISS
.::.::::::::.:... : . : : :.: ..: ::. :..:..: :.::: ... .
NP_001 VLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRN
120 130 140 150 160 170
180
pF1KB0 RIFTAD
.
NP_001 QK
180
>>NP_001019399 (OMIM: 103180) ADP-ribosylation factor 1 (181 aa)
initn: 529 init1: 529 opt: 553 Z-score: 642.1 bits: 125.4 E(85289): 5e-29
Smith-Waterman score: 553; 47.9% identity (83.2% similar) in 167 aa overlap (14-179:15-180)
10 20 30 40 50
pF1KB0 MGLLTILKKMKQKERELRLLMLGLDNAGKTTILKKFN-GEDIDTISPTLGFNIKTLEHR
..:.:.::.::: ::::::: :.. :: . :: ::.:::..:.:..
NP_001 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNVETVEYK
10 20 30 40 50
60 70 80 90 100 110
pF1KB0 GFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGA
......:::::: ..: ::.::..:.:::.:::: ::.:... ..::. .:.:..: :
NP_001 NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB0 TLLIFANKQDLPGALSSNAIREVLELDSIRSHHWCIQGCSAVTGENLLPGIDWLLDDISS
.::.::::::::.:... : . : : :.: ..: ::. :..:..: :.::: ... .
NP_001 VLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRN
120 130 140 150 160 170
180
pF1KB0 RIFTAD
.
NP_001 QK
180
>>NP_001019398 (OMIM: 103180) ADP-ribosylation factor 1 (181 aa)
initn: 529 init1: 529 opt: 553 Z-score: 642.1 bits: 125.4 E(85289): 5e-29
Smith-Waterman score: 553; 47.9% identity (83.2% similar) in 167 aa overlap (14-179:15-180)
10 20 30 40 50
pF1KB0 MGLLTILKKMKQKERELRLLMLGLDNAGKTTILKKFN-GEDIDTISPTLGFNIKTLEHR
..:.:.::.::: ::::::: :.. :: . :: ::.:::..:.:..
NP_001 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNVETVEYK
10 20 30 40 50
60 70 80 90 100 110
pF1KB0 GFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGA
......:::::: ..: ::.::..:.:::.:::: ::.:... ..::. .:.:..: :
NP_001 NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB0 TLLIFANKQDLPGALSSNAIREVLELDSIRSHHWCIQGCSAVTGENLLPGIDWLLDDISS
.::.::::::::.:... : . : : :.: ..: ::. :..:..: :.::: ... .
NP_001 VLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRN
120 130 140 150 160 170
180
pF1KB0 RIFTAD
.
NP_001 QK
180
184 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 17:27:19 2016 done: Sat Nov 5 17:27:20 2016
Total Scan time: 5.830 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]