Result of FASTA (omim) for
pF1KB0987
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB0987, 258 aa
1>>>pF1KB0987 258 - 258 aa - 258 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.4658+/-0.000393; mu= 7.0575+/- 0.025
mean_var=222.2445+/-46.274, 0's: 0 Z-trim(119.6): 127 B-trim: 1581 in 1/54
Lambda= 0.086032
statistics sampled from 33642 (33801) to 33642 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.746), E-opt: 0.2 (0.396), width: 16
Scan time: 6.960
The best scores are: opt bits E(85289)
NP_001273562 (OMIM: 616976) tripartite motif-conta ( 258) 1753 229.7 3.9e-60
XP_011512608 (OMIM: 616976) PREDICTED: tripartite ( 258) 1753 229.7 3.9e-60
XP_011512607 (OMIM: 616976) PREDICTED: tripartite ( 258) 1753 229.7 3.9e-60
XP_011512610 (OMIM: 616976) PREDICTED: tripartite ( 242) 1573 207.4 2e-53
XP_011512611 (OMIM: 616976) PREDICTED: tripartite ( 240) 1521 200.9 1.7e-51
NP_619645 (OMIM: 616976) tripartite motif-containi ( 229) 1033 140.3 2.9e-33
NP_439893 (OMIM: 605701) tripartite motif-containi ( 395) 234 41.4 0.0029
XP_011512527 (OMIM: 605701) PREDICTED: tripartite ( 413) 234 41.5 0.003
NP_001229712 (OMIM: 600830) tripartite motif-conta ( 539) 235 41.7 0.0033
XP_005249432 (OMIM: 600830) PREDICTED: tripartite ( 539) 235 41.7 0.0033
XP_005249431 (OMIM: 600830) PREDICTED: tripartite ( 539) 235 41.7 0.0033
XP_005249434 (OMIM: 600830) PREDICTED: tripartite ( 539) 235 41.7 0.0033
XP_005249435 (OMIM: 600830) PREDICTED: tripartite ( 539) 235 41.7 0.0033
XP_006715243 (OMIM: 600830) PREDICTED: tripartite ( 539) 235 41.7 0.0033
NP_003440 (OMIM: 600830) tripartite motif-containi ( 539) 235 41.7 0.0033
XP_005249433 (OMIM: 600830) PREDICTED: tripartite ( 539) 235 41.7 0.0033
NP_006769 (OMIM: 605701) tripartite motif-containi ( 481) 234 41.5 0.0033
XP_011512524 (OMIM: 605701) PREDICTED: tripartite ( 499) 234 41.6 0.0034
XP_011512523 (OMIM: 605701) PREDICTED: tripartite ( 499) 234 41.6 0.0034
XP_011512525 (OMIM: 605701) PREDICTED: tripartite ( 499) 234 41.6 0.0034
XP_011512567 (OMIM: 609316) PREDICTED: E3 ubiquiti ( 421) 223 40.1 0.0079
NP_008959 (OMIM: 609316) E3 ubiquitin-protein liga ( 425) 223 40.1 0.0079
>>NP_001273562 (OMIM: 616976) tripartite motif-containin (258 aa)
initn: 1753 init1: 1753 opt: 1753 Z-score: 1200.6 bits: 229.7 E(85289): 3.9e-60
Smith-Waterman score: 1753; 100.0% identity (100.0% similar) in 258 aa overlap (1-258:1-258)
10 20 30 40 50 60
pF1KB0 MIPLQKDNQEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRKPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MIPLQKDNQEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRKPC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 SEEVLGTGYICPNHQKRVCRFCEESRLLLCVECLVSPEHMSHHELTIENALSHYKERLNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SEEVLGTGYICPNHQKRVCRFCEESRLLLCVECLVSPEHMSHHELTIENALSHYKERLNR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 RSRKLRKDIAELQRLKAQQEKKLQALQFQVDHGNHRLEAGPESQHQTREQLGALPQQWLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RSRKLRKDIAELQRLKAQQEKKLQALQFQVDHGNHRLEAGPESQHQTREQLGALPQQWLG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 QLEHMPAEAARILDISRAVTQLRSLVIDLERTAKELDTNTLKNAGDLLNRSAPQKLEVIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLEHMPAEAARILDISRAVTQLRSLVIDLERTAKELDTNTLKNAGDLLNRSAPQKLEVIY
190 200 210 220 230 240
250
pF1KB0 PQLEKGVSELLLQPPQKL
::::::::::::::::::
NP_001 PQLEKGVSELLLQPPQKL
250
>>XP_011512608 (OMIM: 616976) PREDICTED: tripartite moti (258 aa)
initn: 1753 init1: 1753 opt: 1753 Z-score: 1200.6 bits: 229.7 E(85289): 3.9e-60
Smith-Waterman score: 1753; 100.0% identity (100.0% similar) in 258 aa overlap (1-258:1-258)
10 20 30 40 50 60
pF1KB0 MIPLQKDNQEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRKPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MIPLQKDNQEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRKPC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 SEEVLGTGYICPNHQKRVCRFCEESRLLLCVECLVSPEHMSHHELTIENALSHYKERLNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SEEVLGTGYICPNHQKRVCRFCEESRLLLCVECLVSPEHMSHHELTIENALSHYKERLNR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 RSRKLRKDIAELQRLKAQQEKKLQALQFQVDHGNHRLEAGPESQHQTREQLGALPQQWLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RSRKLRKDIAELQRLKAQQEKKLQALQFQVDHGNHRLEAGPESQHQTREQLGALPQQWLG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 QLEHMPAEAARILDISRAVTQLRSLVIDLERTAKELDTNTLKNAGDLLNRSAPQKLEVIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QLEHMPAEAARILDISRAVTQLRSLVIDLERTAKELDTNTLKNAGDLLNRSAPQKLEVIY
190 200 210 220 230 240
250
pF1KB0 PQLEKGVSELLLQPPQKL
::::::::::::::::::
XP_011 PQLEKGVSELLLQPPQKL
250
>>XP_011512607 (OMIM: 616976) PREDICTED: tripartite moti (258 aa)
initn: 1753 init1: 1753 opt: 1753 Z-score: 1200.6 bits: 229.7 E(85289): 3.9e-60
Smith-Waterman score: 1753; 100.0% identity (100.0% similar) in 258 aa overlap (1-258:1-258)
10 20 30 40 50 60
pF1KB0 MIPLQKDNQEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRKPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MIPLQKDNQEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRKPC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 SEEVLGTGYICPNHQKRVCRFCEESRLLLCVECLVSPEHMSHHELTIENALSHYKERLNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SEEVLGTGYICPNHQKRVCRFCEESRLLLCVECLVSPEHMSHHELTIENALSHYKERLNR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 RSRKLRKDIAELQRLKAQQEKKLQALQFQVDHGNHRLEAGPESQHQTREQLGALPQQWLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RSRKLRKDIAELQRLKAQQEKKLQALQFQVDHGNHRLEAGPESQHQTREQLGALPQQWLG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 QLEHMPAEAARILDISRAVTQLRSLVIDLERTAKELDTNTLKNAGDLLNRSAPQKLEVIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QLEHMPAEAARILDISRAVTQLRSLVIDLERTAKELDTNTLKNAGDLLNRSAPQKLEVIY
190 200 210 220 230 240
250
pF1KB0 PQLEKGVSELLLQPPQKL
::::::::::::::::::
XP_011 PQLEKGVSELLLQPPQKL
250
>>XP_011512610 (OMIM: 616976) PREDICTED: tripartite moti (242 aa)
initn: 1573 init1: 1573 opt: 1573 Z-score: 1080.1 bits: 207.4 E(85289): 2e-53
Smith-Waterman score: 1573; 100.0% identity (100.0% similar) in 230 aa overlap (1-230:1-230)
10 20 30 40 50 60
pF1KB0 MIPLQKDNQEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRKPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MIPLQKDNQEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRKPC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 SEEVLGTGYICPNHQKRVCRFCEESRLLLCVECLVSPEHMSHHELTIENALSHYKERLNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SEEVLGTGYICPNHQKRVCRFCEESRLLLCVECLVSPEHMSHHELTIENALSHYKERLNR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 RSRKLRKDIAELQRLKAQQEKKLQALQFQVDHGNHRLEAGPESQHQTREQLGALPQQWLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RSRKLRKDIAELQRLKAQQEKKLQALQFQVDHGNHRLEAGPESQHQTREQLGALPQQWLG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 QLEHMPAEAARILDISRAVTQLRSLVIDLERTAKELDTNTLKNAGDLLNRSAPQKLEVIY
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QLEHMPAEAARILDISRAVTQLRSLVIDLERTAKELDTNTLKNAGDLLNRYELSLLLSHM
190 200 210 220 230 240
250
pF1KB0 PQLEKGVSELLLQPPQKL
XP_011 CI
>>XP_011512611 (OMIM: 616976) PREDICTED: tripartite moti (240 aa)
initn: 1521 init1: 1521 opt: 1521 Z-score: 1045.3 bits: 200.9 E(85289): 1.7e-51
Smith-Waterman score: 1521; 100.0% identity (100.0% similar) in 222 aa overlap (1-222:1-222)
10 20 30 40 50 60
pF1KB0 MIPLQKDNQEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRKPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MIPLQKDNQEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRKPC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 SEEVLGTGYICPNHQKRVCRFCEESRLLLCVECLVSPEHMSHHELTIENALSHYKERLNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SEEVLGTGYICPNHQKRVCRFCEESRLLLCVECLVSPEHMSHHELTIENALSHYKERLNR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 RSRKLRKDIAELQRLKAQQEKKLQALQFQVDHGNHRLEAGPESQHQTREQLGALPQQWLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RSRKLRKDIAELQRLKAQQEKKLQALQFQVDHGNHRLEAGPESQHQTREQLGALPQQWLG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 QLEHMPAEAARILDISRAVTQLRSLVIDLERTAKELDTNTLKNAGDLLNRSAPQKLEVIY
::::::::::::::::::::::::::::::::::::::::::
XP_011 QLEHMPAEAARILDISRAVTQLRSLVIDLERTAKELDTNTLKECSTEIRGYLSPVGERSQ
190 200 210 220 230 240
250
pF1KB0 PQLEKGVSELLLQPPQKL
>>NP_619645 (OMIM: 616976) tripartite motif-containing p (229 aa)
initn: 1031 init1: 1031 opt: 1033 Z-score: 718.2 bits: 140.3 E(85289): 2.9e-33
Smith-Waterman score: 1481; 88.8% identity (88.8% similar) in 258 aa overlap (1-258:1-229)
10 20 30 40 50 60
pF1KB0 MIPLQKDNQEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRKPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 MIPLQKDNQEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRKPC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 SEEVLGTGYICPNHQKRVCRFCEESRLLLCVECLVSPEHMSHHELTIENALSHYKERLNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 SEEVLGTGYICPNHQKRVCRFCEESRLLLCVECLVSPEHMSHHELTIENALSHYKERLNR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 RSRKLRKDIAELQRLKAQQEKKLQALQFQVDHGNHRLEAGPESQHQTREQLGALPQQWLG
::::::::::::::::::::::::::: ::::
NP_619 RSRKLRKDIAELQRLKAQQEKKLQALQ-----------------------------QWLG
130 140 150
190 200 210 220 230 240
pF1KB0 QLEHMPAEAARILDISRAVTQLRSLVIDLERTAKELDTNTLKNAGDLLNRSAPQKLEVIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 QLEHMPAEAARILDISRAVTQLRSLVIDLERTAKELDTNTLKNAGDLLNRSAPQKLEVIY
160 170 180 190 200 210
250
pF1KB0 PQLEKGVSELLLQPPQKL
::::::::::::::::::
NP_619 PQLEKGVSELLLQPPQKL
220
>>NP_439893 (OMIM: 605701) tripartite motif-containing p (395 aa)
initn: 386 init1: 205 opt: 234 Z-score: 179.5 bits: 41.4 E(85289): 0.0029
Smith-Waterman score: 356; 27.2% identity (55.5% similar) in 283 aa overlap (10-258:12-288)
10 20 30 40 50
pF1KB0 MIPLQKDNQEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASAS--GVFCCPLC
.: ::::: .:.: :. .::: :::.:::.. : . . ::::
NP_439 MASAASVTSLADEVNCPICQGTLREPVTIDCGHNFCRACLTRYCEIPGPDLEESPTCPLC
10 20 30 40 50 60
60 70 80 90
pF1KB0 RKPCS--------------EEV--------LGTGY--ICPNHQKRVCRFCEESRLLLCVE
..: :.. :: : .: .: ... :::.... :::
NP_439 KEPFRPGSFRPNWQLANVVENIERLQLVSTLGLGEEDVCQEHGEKIYFFCEDDEMQLCVV
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB0 CLVSPEHMSHHELTIENALSHYKERLNRRSRKLRKDIAELQRLKAQQEKKLQALQFQVDH
: . :: .: .:.: . :.:.... . :::. :.:.......:..:.: ::
NP_439 CREAGEHATHTMRFLEDAAAPYREQIHKCLKCLRKEREEIQEIQSRENKRMQVLLTQV--
130 140 150 160 170
160 170 180 190 200
pF1KB0 GNHRLEAGPESQHQTREQLGALPQQWLGQLEHMPAEAARILD-----ISRAVTQLRSLVI
...: .. : : :. : . :.::: . .. : : .. . .. .:.
NP_439 STKRQQVISEFAH-LRKFLEEQQSILLAQLESQDGDILRQRDEFDLLVAGEICRFSALIE
180 190 200 210 220 230
210 220 230 240 250
pF1KB0 DLERTAKELDTNTLKNAGDLLNRSAPQKLE---VIYPQLEKGVSELLLQPPQKL
.::. .. . : . . : : .: . .. :.: . . .. : : :
NP_439 ELEEKNERPARELLTDIRSTLIRCETRKCRKPVAVSPELGQRIRDF---PQQALPLQREM
240 250 260 270 280 290
NP_439 KMFLEKLCFELDYEPAHISLDPQTSHPKLLLSEDHQRAQFSYKWQNSPDNPQRFDRATCV
300 310 320 330 340 350
>>XP_011512527 (OMIM: 605701) PREDICTED: tripartite moti (413 aa)
initn: 318 init1: 205 opt: 234 Z-score: 179.3 bits: 41.5 E(85289): 0.003
Smith-Waterman score: 310; 26.0% identity (54.9% similar) in 273 aa overlap (20-258:40-306)
10 20 30 40
pF1KB0 MIPLQKDNQEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASAS-
.:.: :. .::: :::.:::.. : . .
XP_011 HSVTQSPTCPQKNISSDSGQLTYHHFPSTGTLREPVTIDCGHNFCRACLTRYCEIPGPDL
10 20 30 40 50 60
50 60 70 80
pF1KB0 -GVFCCPLCRKPCS--------------EEV--------LGTGY--ICPNHQKRVCRFCE
::::..: :.. :: : .: .: ... :::
XP_011 EESPTCPLCKEPFRPGSFRPNWQLANVVENIERLQLVSTLGLGEEDVCQEHGEKIYFFCE
70 80 90 100 110 120
90 100 110 120 130 140
pF1KB0 ESRLLLCVECLVSPEHMSHHELTIENALSHYKERLNRRSRKLRKDIAELQRLKAQQEKKL
.... ::: : . :: .: .:.: . :.:.... . :::. :.:.......:..
XP_011 DDEMQLCVVCREAGEHATHTMRFLEDAAAPYREQIHKCLKCLRKEREEIQEIQSRENKRM
130 140 150 160 170 180
150 160 170 180 190
pF1KB0 QALQFQVDHGNHRLEAGPESQHQTREQLGALPQQWLGQLEHMPAEAARILD-----ISRA
:.: ::. ..: .. : : :. : . :.::: . .. : : ..
XP_011 QVLLTQVS--TKRQQVISEFAH-LRKFLEEQQSILLAQLESQDGDILRQRDEFDLLVAGE
190 200 210 220 230 240
200 210 220 230 240 250
pF1KB0 VTQLRSLVIDLERTAKELDTNTLKNAGDLLNRSAPQKLE---VIYPQLEKGVSELLLQPP
. .. .:. .::. .. . : . . : : .: . .. :.: . . .. :
XP_011 ICRFSALIEELEEKNERPARELLTDIRSTLIRCETRKCRKPVAVSPELGQRIRDF---PQ
250 260 270 280 290 300
pF1KB0 QKL
: :
XP_011 QALPLQREMKMFLEKLCFELDYEPAHISLDPQTSHPKLLLSEDHQRAQFSYKWQNSPDNP
310 320 330 340 350 360
>>NP_001229712 (OMIM: 600830) tripartite motif-containin (539 aa)
initn: 329 init1: 164 opt: 235 Z-score: 178.6 bits: 41.7 E(85289): 0.0033
Smith-Waterman score: 320; 28.5% identity (54.7% similar) in 274 aa overlap (3-241:6-274)
10 20 30 40 50
pF1KB0 MIPLQKDNQEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCR
:: .. .:: .: :: . :.. :. .:::.::: : :. :. :.: : :::.
NP_001 MATSAPL-RSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTD-VRPISGSRPVC-PLCK
10 20 30 40 50
60 70 80
pF1KB0 KPCSEEVL------------------GTGY-------------ICPNHQKRVCRFCEESR
:: ..: . : .: :.... .::..
NP_001 KPFKKENIRPVWQLASLVENIERLKVDKGRQPGEVTREQQDAKLCERHREKLHYYCEDDG
60 70 80 90 100 110
90 100 110 120 130 140
pF1KB0 LLLCVECLVSPEHMSHHELTIENALSHYKERLNRRSRKLRKDIAELQRLKAQQEKKLQAL
:::: : : :: : . .:.: . ..:.. . ::.: ..: ..:. : . :
NP_001 KLLCVMCRESREHRPHTAVLMEKAAQPHREKILNHLSTLRRDRDKIQGFQAKGEADILAA
120 130 140 150 160 170
150 160 170 180 190 200
pF1KB0 QFQVDHGNHRLEAGPESQHQ-TREQLGALPQQWLGQLEHMPAEAARILDISRAVTQLRSL
... . . : :. :: ::. : .: :..::. .:. . . ::.: .: :
NP_001 LKKLQDQRQYIVAEFEQGHQFLREREEHLLEQ-LAKLEQELTEGREKFK-SRGVGELARL
180 190 200 210 220 230
210 220 230 240 250
pF1KB0 VI---DLERTAKELDTNTLKNAGDLLNRSAPQKLEVIYPQLEKGVSELLLQPPQKL
.. .:: :.. .. .... :.::: .:. : :
NP_001 ALVISELEGKAQQPAAELMQDTRDFLNRYPRKKFWVGKPIARVVKKKTGEFSDKLLSLQR
240 250 260 270 280 290
NP_001 GLREFQGKLLRDLEYKTVSVTLDPQSASGYLQLSEDWKCVTYTSLYKSAYLHPQQFDCEP
300 310 320 330 340 350
>>XP_005249432 (OMIM: 600830) PREDICTED: tripartite moti (539 aa)
initn: 329 init1: 164 opt: 235 Z-score: 178.6 bits: 41.7 E(85289): 0.0033
Smith-Waterman score: 320; 28.5% identity (54.7% similar) in 274 aa overlap (3-241:6-274)
10 20 30 40 50
pF1KB0 MIPLQKDNQEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCR
:: .. .:: .: :: . :.. :. .:::.::: : :. :. :.: : :::.
XP_005 MATSAPL-RSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTD-VRPISGSRPVC-PLCK
10 20 30 40 50
60 70 80
pF1KB0 KPCSEEVL------------------GTGY-------------ICPNHQKRVCRFCEESR
:: ..: . : .: :.... .::..
XP_005 KPFKKENIRPVWQLASLVENIERLKVDKGRQPGEVTREQQDAKLCERHREKLHYYCEDDG
60 70 80 90 100 110
90 100 110 120 130 140
pF1KB0 LLLCVECLVSPEHMSHHELTIENALSHYKERLNRRSRKLRKDIAELQRLKAQQEKKLQAL
:::: : : :: : . .:.: . ..:.. . ::.: ..: ..:. : . :
XP_005 KLLCVMCRESREHRPHTAVLMEKAAQPHREKILNHLSTLRRDRDKIQGFQAKGEADILAA
120 130 140 150 160 170
150 160 170 180 190 200
pF1KB0 QFQVDHGNHRLEAGPESQHQ-TREQLGALPQQWLGQLEHMPAEAARILDISRAVTQLRSL
... . . : :. :: ::. : .: :..::. .:. . . ::.: .: :
XP_005 LKKLQDQRQYIVAEFEQGHQFLREREEHLLEQ-LAKLEQELTEGREKFK-SRGVGELARL
180 190 200 210 220 230
210 220 230 240 250
pF1KB0 VI---DLERTAKELDTNTLKNAGDLLNRSAPQKLEVIYPQLEKGVSELLLQPPQKL
.. .:: :.. .. .... :.::: .:. : :
XP_005 ALVISELEGKAQQPAAELMQDTRDFLNRYPRKKFWVGKPIARVVKKKTGEFSDKLLSLQR
240 250 260 270 280 290
XP_005 GLREFQGKLLRDLEYKTVSVTLDPQSASGYLQLSEDWKCVTYTSLYKSAYLHPQQFDCEP
300 310 320 330 340 350
258 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 17:41:41 2016 done: Sat Nov 5 17:41:43 2016
Total Scan time: 6.960 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]