Result of FASTA (omim) for
pF1KB0998
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB0998, 230 aa
1>>>pF1KB0998 230 - 230 aa - 230 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.4269+/-0.00029; mu= 19.8074+/- 0.018
mean_var=61.7207+/-12.362, 0's: 0 Z-trim(117.2): 59 B-trim: 42 in 1/53
Lambda= 0.163252
statistics sampled from 28861 (28926) to 28861 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.704), E-opt: 0.2 (0.339), width: 16
Scan time: 6.850
The best scores are: opt bits E(85289)
NP_065117 (OMIM: 300520) claudin-2 [Homo sapiens] ( 230) 1507 362.7 3e-100
NP_001164566 (OMIM: 300520) claudin-2 [Homo sapien ( 230) 1507 362.7 3e-100
NP_001164563 (OMIM: 300520) claudin-2 [Homo sapien ( 230) 1507 362.7 3e-100
NP_001139551 (OMIM: 605608,614035) claudin-14 [Hom ( 239) 741 182.3 6.3e-46
NP_652763 (OMIM: 605608,614035) claudin-14 [Homo s ( 239) 741 182.3 6.3e-46
NP_001139550 (OMIM: 605608,614035) claudin-14 [Hom ( 239) 741 182.3 6.3e-46
NP_001139549 (OMIM: 605608,614035) claudin-14 [Hom ( 239) 741 182.3 6.3e-46
NP_036262 (OMIM: 605608,614035) claudin-14 [Homo s ( 239) 741 182.3 6.3e-46
NP_001297 (OMIM: 602910) claudin-3 [Homo sapiens] ( 220) 591 146.9 2.5e-35
NP_001296 (OMIM: 602909) claudin-4 [Homo sapiens] ( 209) 578 143.8 2.1e-34
NP_067018 (OMIM: 615798) claudin-6 precursor [Homo ( 220) 576 143.4 2.9e-34
NP_683763 (OMIM: 248190,610036) claudin-19 isoform ( 224) 576 143.4 3e-34
NP_066192 (OMIM: 615799) claudin-9 [Homo sapiens] ( 217) 571 142.2 6.6e-34
NP_001116867 (OMIM: 248190,610036) claudin-19 isof ( 211) 565 140.8 1.7e-33
NP_001298 (OMIM: 609131) claudin-7 isoform 1 precu ( 211) 559 139.4 4.6e-33
NP_001171951 (OMIM: 609131) claudin-7 isoform 1 pr ( 211) 559 139.4 4.6e-33
NP_066924 (OMIM: 603718,607626) claudin-1 [Homo sa ( 211) 529 132.3 6.2e-31
NP_036263 (OMIM: 617005) claudin-17 [Homo sapiens] ( 224) 504 126.4 3.8e-29
NP_955360 (OMIM: 611231) claudin-8 [Homo sapiens] ( 225) 503 126.2 4.5e-29
XP_016884419 (OMIM: 602101) PREDICTED: claudin-5 i ( 303) 498 125.1 1.3e-28
XP_016884418 (OMIM: 602101) PREDICTED: claudin-5 i ( 303) 498 125.1 1.3e-28
NP_001124333 (OMIM: 602101) claudin-5 [Homo sapien ( 303) 498 125.1 1.3e-28
NP_003268 (OMIM: 602101) claudin-5 [Homo sapiens] ( 303) 498 125.1 1.3e-28
NP_001172046 (OMIM: 248190,610036) claudin-19 isof ( 218) 447 113.0 4.1e-25
NP_001172009 (OMIM: 615778) claudin-15 [Homo sapie ( 228) 429 108.8 8e-24
NP_055158 (OMIM: 615778) claudin-15 [Homo sapiens] ( 228) 429 108.8 8e-24
NP_001171952 (OMIM: 609131) claudin-7 isoform 2 pr ( 145) 392 99.9 2.4e-21
NP_001002026 (OMIM: 609210) claudin-18 isoform 2 [ ( 261) 293 76.8 3.9e-14
NP_057453 (OMIM: 609210) claudin-18 isoform 1 prec ( 261) 287 75.4 1e-13
NP_005593 (OMIM: 601326) claudin-11 isoform 1 [Hom ( 207) 261 69.2 6.1e-12
NP_919260 (OMIM: 609203) claudin-23 [Homo sapiens] ( 292) 236 63.4 4.6e-10
NP_006571 (OMIM: 248250,603959) claudin-16 [Homo s ( 305) 210 57.3 3.3e-08
NP_005771 (OMIM: 606710) lipoma HMGIC fusion partn ( 200) 157 44.7 0.00014
XP_011533163 (OMIM: 606710) PREDICTED: lipoma HMGI ( 200) 157 44.7 0.00014
NP_036261 (OMIM: 611232) claudin-12 [Homo sapiens] ( 244) 143 41.5 0.0016
NP_001172002 (OMIM: 611232) claudin-12 [Homo sapie ( 244) 143 41.5 0.0016
NP_001172001 (OMIM: 611232) claudin-12 [Homo sapie ( 244) 143 41.5 0.0016
>>NP_065117 (OMIM: 300520) claudin-2 [Homo sapiens] (230 aa)
initn: 1507 init1: 1507 opt: 1507 Z-score: 1920.8 bits: 362.7 E(85289): 3e-100
Smith-Waterman score: 1507; 100.0% identity (100.0% similar) in 230 aa overlap (1-230:1-230)
10 20 30 40 50 60
pF1KB0 MASLGLQLVGYILGLLGLLGTLVAMLLPSWKTSSYVGASIVTAVGFSKGLWMECATHSTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 MASLGLQLVGYILGLLGLLGTLVAMLLPSWKTSSYVGASIVTAVGFSKGLWMECATHSTG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 ITQCDIYSTLLGLPADIQAAQAMMVTSSAISSLACIISVVGMRCTVFCQESRAKDRVAVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 ITQCDIYSTLLGLPADIQAAQAMMVTSSAISSLACIISVVGMRCTVFCQESRAKDRVAVA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 GGVFFILGGLLGFIPVAWNLHGILRDFYSPLVPDSMKFEIGEALYLGIISSLFSLIAGII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 GGVFFILGGLLGFIPVAWNLHGILRDFYSPLVPDSMKFEIGEALYLGIISSLFSLIAGII
130 140 150 160 170 180
190 200 210 220 230
pF1KB0 LCFSCSSQRNRSNYYDAYQAQPLATRSSPRPGQPPKVKSEFNSYSLTGYV
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 LCFSCSSQRNRSNYYDAYQAQPLATRSSPRPGQPPKVKSEFNSYSLTGYV
190 200 210 220 230
>>NP_001164566 (OMIM: 300520) claudin-2 [Homo sapiens] (230 aa)
initn: 1507 init1: 1507 opt: 1507 Z-score: 1920.8 bits: 362.7 E(85289): 3e-100
Smith-Waterman score: 1507; 100.0% identity (100.0% similar) in 230 aa overlap (1-230:1-230)
10 20 30 40 50 60
pF1KB0 MASLGLQLVGYILGLLGLLGTLVAMLLPSWKTSSYVGASIVTAVGFSKGLWMECATHSTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MASLGLQLVGYILGLLGLLGTLVAMLLPSWKTSSYVGASIVTAVGFSKGLWMECATHSTG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 ITQCDIYSTLLGLPADIQAAQAMMVTSSAISSLACIISVVGMRCTVFCQESRAKDRVAVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ITQCDIYSTLLGLPADIQAAQAMMVTSSAISSLACIISVVGMRCTVFCQESRAKDRVAVA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 GGVFFILGGLLGFIPVAWNLHGILRDFYSPLVPDSMKFEIGEALYLGIISSLFSLIAGII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGVFFILGGLLGFIPVAWNLHGILRDFYSPLVPDSMKFEIGEALYLGIISSLFSLIAGII
130 140 150 160 170 180
190 200 210 220 230
pF1KB0 LCFSCSSQRNRSNYYDAYQAQPLATRSSPRPGQPPKVKSEFNSYSLTGYV
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LCFSCSSQRNRSNYYDAYQAQPLATRSSPRPGQPPKVKSEFNSYSLTGYV
190 200 210 220 230
>>NP_001164563 (OMIM: 300520) claudin-2 [Homo sapiens] (230 aa)
initn: 1507 init1: 1507 opt: 1507 Z-score: 1920.8 bits: 362.7 E(85289): 3e-100
Smith-Waterman score: 1507; 100.0% identity (100.0% similar) in 230 aa overlap (1-230:1-230)
10 20 30 40 50 60
pF1KB0 MASLGLQLVGYILGLLGLLGTLVAMLLPSWKTSSYVGASIVTAVGFSKGLWMECATHSTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MASLGLQLVGYILGLLGLLGTLVAMLLPSWKTSSYVGASIVTAVGFSKGLWMECATHSTG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 ITQCDIYSTLLGLPADIQAAQAMMVTSSAISSLACIISVVGMRCTVFCQESRAKDRVAVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ITQCDIYSTLLGLPADIQAAQAMMVTSSAISSLACIISVVGMRCTVFCQESRAKDRVAVA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 GGVFFILGGLLGFIPVAWNLHGILRDFYSPLVPDSMKFEIGEALYLGIISSLFSLIAGII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGVFFILGGLLGFIPVAWNLHGILRDFYSPLVPDSMKFEIGEALYLGIISSLFSLIAGII
130 140 150 160 170 180
190 200 210 220 230
pF1KB0 LCFSCSSQRNRSNYYDAYQAQPLATRSSPRPGQPPKVKSEFNSYSLTGYV
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LCFSCSSQRNRSNYYDAYQAQPLATRSSPRPGQPPKVKSEFNSYSLTGYV
190 200 210 220 230
>>NP_001139551 (OMIM: 605608,614035) claudin-14 [Homo sa (239 aa)
initn: 766 init1: 707 opt: 741 Z-score: 945.6 bits: 182.3 E(85289): 6.3e-46
Smith-Waterman score: 741; 47.8% identity (78.3% similar) in 230 aa overlap (1-227:1-226)
10 20 30 40 50 60
pF1KB0 MASLGLQLVGYILGLLGLLGTLVAMLLPSWKTSSYVGASIVTAVGFSKGLWMECATHSTG
::: ..::.:..:..::..:::.. .:: :. ...::..:.:::.. :::::::. ::::
NP_001 MASTAVQLLGFLLSFLGMVGTLITTILPHWRRTAHVGTNILTAVSYLKGLWMECVWHSTG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 ITQCDIYSTLLGLPADIQAAQAMMVTSSAISSLACIISVVGMRCTVFCQESRAKDRVAVA
: ::.:: .::.:: :.:::.:.:: : .:..:: .:.::.:: . . :: :.
NP_001 IYQCQIYRSLLALPQDLQAARALMVISCLLSGIACACAVIGMKCTRCAKGTPAKTTFAIL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 GGVFFILGGLLGFIPVAWNLHGILRDFYSPLVPDSMKFEIGEALYLGIISSLFSLIAGII
::..:::.::: .. :.:. . ....::.::.:..::::::.:::::.::: .:::.: .
NP_001 GGTLFILAGLLCMVAVSWTTNDVVQNFYNPLLPSGMKFEIGQALYLGFISSSLSLIGGTL
130 140 150 160 170 180
190 200 210 220 230
pF1KB0 LCFSCSSQRNRSNYYDAYQAQPLATRSSPR--PG-QPPKVKSEFNSYSLTGYV
::.::... : ::: : :: .. :. ::: . .. . :.:
NP_001 LCLSCQDEAP----YRPYQAPPRATTTTANTAPAYQPPAAYKDNRAPSVTSATHSGYRLN
190 200 210 220 230
NP_001 DYV
>>NP_652763 (OMIM: 605608,614035) claudin-14 [Homo sapie (239 aa)
initn: 766 init1: 707 opt: 741 Z-score: 945.6 bits: 182.3 E(85289): 6.3e-46
Smith-Waterman score: 741; 47.8% identity (78.3% similar) in 230 aa overlap (1-227:1-226)
10 20 30 40 50 60
pF1KB0 MASLGLQLVGYILGLLGLLGTLVAMLLPSWKTSSYVGASIVTAVGFSKGLWMECATHSTG
::: ..::.:..:..::..:::.. .:: :. ...::..:.:::.. :::::::. ::::
NP_652 MASTAVQLLGFLLSFLGMVGTLITTILPHWRRTAHVGTNILTAVSYLKGLWMECVWHSTG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 ITQCDIYSTLLGLPADIQAAQAMMVTSSAISSLACIISVVGMRCTVFCQESRAKDRVAVA
: ::.:: .::.:: :.:::.:.:: : .:..:: .:.::.:: . . :: :.
NP_652 IYQCQIYRSLLALPQDLQAARALMVISCLLSGIACACAVIGMKCTRCAKGTPAKTTFAIL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 GGVFFILGGLLGFIPVAWNLHGILRDFYSPLVPDSMKFEIGEALYLGIISSLFSLIAGII
::..:::.::: .. :.:. . ....::.::.:..::::::.:::::.::: .:::.: .
NP_652 GGTLFILAGLLCMVAVSWTTNDVVQNFYNPLLPSGMKFEIGQALYLGFISSSLSLIGGTL
130 140 150 160 170 180
190 200 210 220 230
pF1KB0 LCFSCSSQRNRSNYYDAYQAQPLATRSSPR--PG-QPPKVKSEFNSYSLTGYV
::.::... : ::: : :: .. :. ::: . .. . :.:
NP_652 LCLSCQDEAP----YRPYQAPPRATTTTANTAPAYQPPAAYKDNRAPSVTSATHSGYRLN
190 200 210 220 230
NP_652 DYV
>>NP_001139550 (OMIM: 605608,614035) claudin-14 [Homo sa (239 aa)
initn: 766 init1: 707 opt: 741 Z-score: 945.6 bits: 182.3 E(85289): 6.3e-46
Smith-Waterman score: 741; 47.8% identity (78.3% similar) in 230 aa overlap (1-227:1-226)
10 20 30 40 50 60
pF1KB0 MASLGLQLVGYILGLLGLLGTLVAMLLPSWKTSSYVGASIVTAVGFSKGLWMECATHSTG
::: ..::.:..:..::..:::.. .:: :. ...::..:.:::.. :::::::. ::::
NP_001 MASTAVQLLGFLLSFLGMVGTLITTILPHWRRTAHVGTNILTAVSYLKGLWMECVWHSTG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 ITQCDIYSTLLGLPADIQAAQAMMVTSSAISSLACIISVVGMRCTVFCQESRAKDRVAVA
: ::.:: .::.:: :.:::.:.:: : .:..:: .:.::.:: . . :: :.
NP_001 IYQCQIYRSLLALPQDLQAARALMVISCLLSGIACACAVIGMKCTRCAKGTPAKTTFAIL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 GGVFFILGGLLGFIPVAWNLHGILRDFYSPLVPDSMKFEIGEALYLGIISSLFSLIAGII
::..:::.::: .. :.:. . ....::.::.:..::::::.:::::.::: .:::.: .
NP_001 GGTLFILAGLLCMVAVSWTTNDVVQNFYNPLLPSGMKFEIGQALYLGFISSSLSLIGGTL
130 140 150 160 170 180
190 200 210 220 230
pF1KB0 LCFSCSSQRNRSNYYDAYQAQPLATRSSPR--PG-QPPKVKSEFNSYSLTGYV
::.::... : ::: : :: .. :. ::: . .. . :.:
NP_001 LCLSCQDEAP----YRPYQAPPRATTTTANTAPAYQPPAAYKDNRAPSVTSATHSGYRLN
190 200 210 220 230
NP_001 DYV
>>NP_001139549 (OMIM: 605608,614035) claudin-14 [Homo sa (239 aa)
initn: 766 init1: 707 opt: 741 Z-score: 945.6 bits: 182.3 E(85289): 6.3e-46
Smith-Waterman score: 741; 47.8% identity (78.3% similar) in 230 aa overlap (1-227:1-226)
10 20 30 40 50 60
pF1KB0 MASLGLQLVGYILGLLGLLGTLVAMLLPSWKTSSYVGASIVTAVGFSKGLWMECATHSTG
::: ..::.:..:..::..:::.. .:: :. ...::..:.:::.. :::::::. ::::
NP_001 MASTAVQLLGFLLSFLGMVGTLITTILPHWRRTAHVGTNILTAVSYLKGLWMECVWHSTG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 ITQCDIYSTLLGLPADIQAAQAMMVTSSAISSLACIISVVGMRCTVFCQESRAKDRVAVA
: ::.:: .::.:: :.:::.:.:: : .:..:: .:.::.:: . . :: :.
NP_001 IYQCQIYRSLLALPQDLQAARALMVISCLLSGIACACAVIGMKCTRCAKGTPAKTTFAIL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 GGVFFILGGLLGFIPVAWNLHGILRDFYSPLVPDSMKFEIGEALYLGIISSLFSLIAGII
::..:::.::: .. :.:. . ....::.::.:..::::::.:::::.::: .:::.: .
NP_001 GGTLFILAGLLCMVAVSWTTNDVVQNFYNPLLPSGMKFEIGQALYLGFISSSLSLIGGTL
130 140 150 160 170 180
190 200 210 220 230
pF1KB0 LCFSCSSQRNRSNYYDAYQAQPLATRSSPR--PG-QPPKVKSEFNSYSLTGYV
::.::... : ::: : :: .. :. ::: . .. . :.:
NP_001 LCLSCQDEAP----YRPYQAPPRATTTTANTAPAYQPPAAYKDNRAPSVTSATHSGYRLN
190 200 210 220 230
NP_001 DYV
>>NP_036262 (OMIM: 605608,614035) claudin-14 [Homo sapie (239 aa)
initn: 766 init1: 707 opt: 741 Z-score: 945.6 bits: 182.3 E(85289): 6.3e-46
Smith-Waterman score: 741; 47.8% identity (78.3% similar) in 230 aa overlap (1-227:1-226)
10 20 30 40 50 60
pF1KB0 MASLGLQLVGYILGLLGLLGTLVAMLLPSWKTSSYVGASIVTAVGFSKGLWMECATHSTG
::: ..::.:..:..::..:::.. .:: :. ...::..:.:::.. :::::::. ::::
NP_036 MASTAVQLLGFLLSFLGMVGTLITTILPHWRRTAHVGTNILTAVSYLKGLWMECVWHSTG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 ITQCDIYSTLLGLPADIQAAQAMMVTSSAISSLACIISVVGMRCTVFCQESRAKDRVAVA
: ::.:: .::.:: :.:::.:.:: : .:..:: .:.::.:: . . :: :.
NP_036 IYQCQIYRSLLALPQDLQAARALMVISCLLSGIACACAVIGMKCTRCAKGTPAKTTFAIL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 GGVFFILGGLLGFIPVAWNLHGILRDFYSPLVPDSMKFEIGEALYLGIISSLFSLIAGII
::..:::.::: .. :.:. . ....::.::.:..::::::.:::::.::: .:::.: .
NP_036 GGTLFILAGLLCMVAVSWTTNDVVQNFYNPLLPSGMKFEIGQALYLGFISSSLSLIGGTL
130 140 150 160 170 180
190 200 210 220 230
pF1KB0 LCFSCSSQRNRSNYYDAYQAQPLATRSSPR--PG-QPPKVKSEFNSYSLTGYV
::.::... : ::: : :: .. :. ::: . .. . :.:
NP_036 LCLSCQDEAP----YRPYQAPPRATTTTANTAPAYQPPAAYKDNRAPSVTSATHSGYRLN
190 200 210 220 230
NP_036 DYV
>>NP_001297 (OMIM: 602910) claudin-3 [Homo sapiens] (220 aa)
initn: 625 init1: 574 opt: 591 Z-score: 755.1 bits: 146.9 E(85289): 2.5e-35
Smith-Waterman score: 591; 39.0% identity (78.6% similar) in 210 aa overlap (3-212:2-207)
10 20 30 40 50 60
pF1KB0 MASLGLQLVGYILGLLGLLGTLVAMLLPSWKTSSYVGASIVTAVGFSKGLWMECATHSTG
:.::...: :..:: :::.: :: :..:...:..:.:. .. .::::.:...:::
NP_001 MSMGLEITGTALAVLGWLGTIVCCALPMWRVSAFIGSNIITSQNIWEGLWMNCVVQSTG
10 20 30 40 50
70 80 90 100 110 120
pF1KB0 ITQCDIYSTLLGLPADIQAAQAMMVTSSAISSLACIISVVGMRCTVFCQESRAKDRVAVA
:: .:..::.:: :.:::.:..:.. ..... ....:: .:: :.. :: .....
NP_001 QMQCKVYDSLLALPQDLQAARALIVVAILLAAFGLLVALVGAQCTNCVQDDTAKAKITIV
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB0 GGVFFILGGLLGFIPVAWNLHGILRDFYSPLVPDSMKFEIGEALYLGIISSLFSLIAGII
.::.:.:..:: ..::.:. . :.::::.:.::...: :.: .::.: .. ..:..: .
NP_001 AGVLFLLAALLTLVPVSWSANTIIRDFYNPVVPEAQKREMGAGLYVGWAAAALQLLGGAL
120 130 140 150 160 170
190 200 210 220 230
pF1KB0 LCFSCSSQRNRSNYYDAYQAQPLATRSSPRPGQPPKVKSEFNSYSLTGYV
:: :: .... : : .. : ::. ::
NP_001 LCCSCPPREKK---YTATKVVYSAPRSTG-PGASLGTGYDRKDYV
180 190 200 210 220
>>NP_001296 (OMIM: 602909) claudin-4 [Homo sapiens] (209 aa)
initn: 599 init1: 572 opt: 578 Z-score: 738.8 bits: 143.8 E(85289): 2.1e-34
Smith-Waterman score: 578; 39.4% identity (76.4% similar) in 208 aa overlap (1-208:1-203)
10 20 30 40 50 60
pF1KB0 MASLGLQLVGYILGLLGLLGTLVAMLLPSWKTSSYVGASIVTAVGFSKGLWMECATHSTG
:::.:::..: :..:: :.... :: :......:..:::. . .::::.:...:::
NP_001 MASMGLQVMGIALAVLGWLAVMLCCALPMWRVTAFIGSNIVTSQTIWEGLWMNCVVQSTG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 ITQCDIYSTLLGLPADIQAAQAMMVTSSAISSLACIISVVGMRCTVFCQESRAKDRVAVA
:: .:..::.:: :.:::.:... : ...:. ..:::: .:: .. :: .. ..
NP_001 QMQCKVYDSLLALPQDLQAARALVIISIIVAALGVLLSVVGGKCTNCLEDESAKAKTMIV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 GGVFFILGGLLGFIPVAWNLHGILRDFYSPLVPDSMKFEIGEALYLGIISSLFSLIAGII
.:: :.:.::. ..::.:. :.:..:::.::: ...: :.: .::.: .: . :..: .
NP_001 AGVVFLLAGLMVIVPVSWTAHNIIQDFYNPLVASGQKREMGASLYVGWAASGLLLLGGGL
130 140 150 160 170 180
190 200 210 220 230
pF1KB0 LCFSCSSQRNRSNYYDAYQAQPLATRSSPRPGQPPKVKSEFNSYSLTGYV
:: .: . .. :.:. :.::.
NP_001 LCCNCPPRTDKP-----YSAKYSAARSAAASNYV
190 200
230 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 20:25:52 2016 done: Fri Nov 4 20:25:53 2016
Total Scan time: 6.850 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]