FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB1292, 652 aa
  1>>>pF1KB1292 652 - 652 aa - 652 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.9245+/-0.00107; mu= 16.8635+/- 0.064
 mean_var=82.6423+/-16.547, 0's: 0 Z-trim(104.8): 15  B-trim: 181 in 2/46
 Lambda= 0.141082
 statistics sampled from 8100 (8105) to 8100 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.607), E-opt: 0.2 (0.249), width:  16
 Scan time:  2.810

The best scores are:                                      opt bits E(32554)
CCDS6132.1 SLC20A2 gene_id:6575|Hs108|chr8         ( 652) 4273 880.0       0
CCDS2099.1 SLC20A1 gene_id:6574|Hs108|chr2         ( 679) 1240 262.7 1.2e-69


>>CCDS6132.1 SLC20A2 gene_id:6575|Hs108|chr8              (652 aa)
 initn: 4273 init1: 4273 opt: 4273  Z-score: 4700.4  bits: 880.0 E(32554):    0
Smith-Waterman score: 4273; 99.8% identity (100.0% similar) in 652 aa overlap (1-652:1-652)

               10        20        30        40        50        60
pF1KB1 MAMDEYLWMVILGFIIAFILAFSVGANDVANSFGTAVGSGVVTLRQACILASIFETTGSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 MAMDEYLWMVILGFIIAFILAFSVGANDVANSFGTAVGSGVVTLRQACILASIFETTGSV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB1 LLGAKVGETIRKGIIDVNLYNETVETLMAGEVSAMVGSAVWQLIASFLRLPISGTHCIVG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 LLGAKVGETIRKGIIDVNLYNETVETLMAGEVSAMVGSAVWQLIASFLRLPISGTHCIVG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB1 STIGFSLVAIGTKGVQWMELVKIVASWFISPLLSGFMSGLLFVLIRIFILKKEDPVPNGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 STIGFSLVAIGTKGVQWMELVKIVASWFISPLLSGFMSGLLFVLIRIFILKKEDPVPNGL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB1 RALPVFYAATIAINVFSIMYTGAPVLGLVLPMWAIALISFGVALLFAFFVWLFVCPWMRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 RALPVFYAATIAINVFSIMYTGAPVLGLVLPMWAIALISFGVALLFAFFVWLFVCPWMRR
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB1 KITGKLQKEGALSRVSDESLSKVQEAESPVFKELPGAKANDDSTIPLTGAAGETLGTSEG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 KITGKLQKEGALSRVSDESLSKVQEAESPVFKELPGAKANDDSTIPLTGAAGETLGTSEG
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB1 TSASSHPRAAYGRALSMTHGSVKSPISNGTFGFDGHTRSDGHVYHTVHKDSGLYKDLLHK
       :::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 TSAGSHPRAAYGRALSMTHGSVKSPISNGTFGFDGHTRSDGHVYHTVHKDSGLYKDLLHK
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB1 IHIDRGPEEKPAQESNYRLLRRNNSYTCYTAAICGLPVHATFRAADSSAPEDSEKLVGDT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 IHIDRGPEEKPAQESNYRLLRRNNSYTCYTAAICGLPVHATFRAADSSAPEDSEKLVGDT
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB1 VSYSKKRLRYDSYSSYCNAVAEAEIEAEEGGVEMKLASELADPDQPREDPAEEEKEEKDA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 VSYSKKRLRYDSYSSYCNAVAEAEIEAEEGGVEMKLASELADPDQPREDPAEEEKEEKDA
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB1 PEVHLLFHFLQVLTACFGSFAHGGNDVSNAIGPLVALWLIYKQGGVTQEAATPVWLLFYG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 PEVHLLFHFLQVLTACFGSFAHGGNDVSNAIGPLVALWLIYKQGGVTQEAATPVWLLFYG
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB1 GVGICTGLWVWGRRVIQTMGKDLTPITPSSGFTIELASAFTVVIASNIGLPVSTTHCKVG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 GVGICTGLWVWGRRVIQTMGKDLTPITPSSGFTIELASAFTVVIASNIGLPVSTTHCKVG
              550       560       570       580       590       600

              610       620       630       640       650  
pF1KB1 SVVAVGWIRSRKAVDWRLFRNIFVAWFVTVPVAGLFSAAVMALLMYGILPYV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 SVVAVGWIRSRKAVDWRLFRNIFVAWFVTVPVAGLFSAAVMALLMYGILPYV
              610       620       630       640       650  

>>CCDS2099.1 SLC20A1 gene_id:6574|Hs108|chr2              (679 aa)
 initn: 2430 init1: 1096 opt: 1240  Z-score: 1363.8  bits: 262.7 E(32554): 1.2e-69
Smith-Waterman score: 2523; 60.7% identity (80.1% similar) in 672 aa overlap (5-649:20-677)

                              10        20        30        40     
pF1KB1                MAMDEYLWMVILGFIIAFILAFSVGANDVANSFGTAVGSGVVTLR
                          .::::.::::::::.:::::::::::::::::::::::::.
CCDS20 MATLITSTTAATAASGPLVDYLWMLILGFIIAFVLAFSVGANDVANSFGTAVGSGVVTLK
               10        20        30        40        50        60

          50        60        70        80        90       100     
pF1KB1 QACILASIFETTGSVLLGAKVGETIRKGIIDVNLYNETVETLMAGEVSAMVGSAVWQLIA
       :::::::::::.:::::::::.::::::.:::..:: :   :::: :::: :::::::.:
CCDS20 QACILASIFETVGSVLLGAKVSETIRKGLIDVEMYNSTQGLLMAGSVSAMFGSAVWQLVA
               70        80        90       100       110       120

         110       120       130       140       150       160     
pF1KB1 SFLRLPISGTHCIVGSTIGFSLVAIGTKGVQWMELVKIVASWFISPLLSGFMSGLLFVLI
       :::.:::::::::::.:::::::: : .::.: ::.::: :::.::::::.:::.:: :.
CCDS20 SFLKLPISGTHCIVGATIGFSLVAKGQEGVKWSELIKIVMSWFVSPLLSGIMSGILFFLV
              130       140       150       160       170       180

         170       180       190       200        210       220    
pF1KB1 RIFILKKEDPVPNGLRALPVFYAATIAINVFSIMYTGAPVLGL-VLPMWAIALISFGVAL
       : :::.: ::::::::::::::: :..::.:::::::::.::.  ::.:.  ::: : :.
CCDS20 RAFILHKADPVPNGLRALPVFYACTVGINLFSIMYTGAPLLGFDKLPLWGTILISVGCAV
              190       200       210       220       230       240

          230       240                 250       260         270  
pF1KB1 LFAFFVWLFVCPWMRRKITGK----------LQKEGALSRVSDESLSKVQEAES--PVFK
       . :..::.:::: :.:::  .          ..:...:..  .:.  .: . :.  :: .
CCDS20 FCALIVWFFVCPRMKRKIEREIKCSPSESPLMEKKNSLKEDHEETKLSVGDIENKHPVSE
              250       260       270       280       290       300

            280       290            300        310          320   
pF1KB1 ELPGAKANDDSTIPLTGAAGET-----LGTSEGTSASSH-PRAAYGRALSM---THGSVK
         :       .:.:: ... :      ::  : .    . : .   .  :.   ..:.:.
CCDS20 VGP-------ATVPLQAVVEERTVSFKLGDLEEAPERERLPSVDLKEETSIDSTVNGAVQ
                     310       320       330       340       350   

           330          340        350       360       370         
pF1KB1 SPISNGT-FG--FDGHTRSDGHV-YHTVHKDSGLYKDLLHKIHIDRGPEEKPAQESNYRL
        : .: . :.   ...  :.::  ::::::::::::.::::.:. .  .     .:. . 
CCDS20 LPNGNLVQFSQAVSNQINSSGHYQYHTVHKDSGLYKELLHKLHLAKVGDC--MGDSGDKP
           360       370       380       390       400         410 

     380       390       400       410        420       430        
pF1KB1 LRRNNSYTCYTAAICGLPVHATFRAADSSAP-EDSEKLVGDTVSYSKKRLRYDSYSSYCN
       :::::::: :: ::::.:.  .::: ..    :. :::.  ... ::::.:.:::.::::
CCDS20 LRRNNSYTSYTMAICGMPLD-SFRAKEGEQKGEEMEKLTWPNAD-SKKRIRMDSYTSYCN
             420       430        440       450        460         

      440       450       460       470       480       490        
pF1KB1 AVAEAEIEAEEGGVEMKLASELADPDQPREDPAEEEKEEKDAPEVHLLFHFLQVLTACFG
       ::.. .  .:   ..:.. .:..  :.   . . ::  ..: ::: :::.:::.::::::
CCDS20 AVSDLHSASE---IDMSVKAEMGLGDRKGSNGSLEEWYDQDKPEVSLLFQFLQILTACFG
     470          480       490       500       510       520      

      500       510       520       530       540       550        
pF1KB1 SFAHGGNDVSNAIGPLVALWLIYKQGGVTQEAATPVWLLFYGGVGICTGLWVWGRRVIQT
       :::::::::::::::::::.:.:  : :....:::.:::.:::::::.::::::::::::
CCDS20 SFAHGGNDVSNAIGPLVALYLVYDTGDVSSKVATPIWLLLYGGVGICVGLWVWGRRVIQT
        530       540       550       560       570       580      

      560       570       580       590       600       610        
pF1KB1 MGKDLTPITPSSGFTIELASAFTVVIASNIGLPVSTTHCKVGSVVAVGWIRSRKAVDWRL
       ::::::::::::::.::::::.:::::::::::.:::::::::::.:::.::.:::::::
CCDS20 MGKDLTPITPSSGFSIELASALTVVIASNIGLPISTTHCKVGSVVSVGWLRSKKAVDWRL
        590       600       610       620       630       640      

      620       630       640       650  
pF1KB1 FRNIFVAWFVTVPVAGLFSAAVMALLMYGILPYV
       :::::.:::::::..:..:::.::.. : ::   
CCDS20 FRNIFMAWFVTVPISGVISAAIMAIFRYVILRM 
        650       660       670          




652 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 20:24:06 2016 done: Thu Nov  3 20:24:07 2016
 Total Scan time:  2.810 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]