Result of FASTA (omim) for
pF1KB3092
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3092, 716 aa
1>>>pF1KB3092 716 - 716 aa - 716 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.1853+/-0.000466; mu= 15.6209+/- 0.029
mean_var=86.1107+/-16.691, 0's: 0 Z-trim(110.7): 191 B-trim: 43 in 1/53
Lambda= 0.138212
statistics sampled from 18911 (19106) to 18911 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.57), E-opt: 0.2 (0.224), width: 16
Scan time: 10.760
The best scores are: opt bits E(85289)
NP_055078 (OMIM: 607472) ATP-dependent zinc metall ( 716) 4629 933.7 0
NP_647473 (OMIM: 607472) ATP-dependent zinc metall ( 773) 4285 865.2 0
NP_001240795 (OMIM: 607472) ATP-dependent zinc met ( 683) 3669 742.3 1.4e-213
XP_011517602 (OMIM: 607472) PREDICTED: ATP-depende ( 740) 3669 742.3 1.6e-213
NP_006787 (OMIM: 604581,610246,614487) AFG3-like p ( 797) 1143 238.7 6.9e-62
NP_003110 (OMIM: 602783,607259) paraplegin isoform ( 795) 1015 213.1 3.3e-54
XP_006721327 (OMIM: 602783,607259) PREDICTED: para ( 809) 1015 213.2 3.4e-54
XP_011523903 (OMIM: 604581,610246,614487) PREDICTE ( 730) 928 195.8 5.2e-49
XP_016879087 (OMIM: 602783,607259) PREDICTED: para ( 561) 755 161.2 1e-38
XP_016879086 (OMIM: 602783,607259) PREDICTED: para ( 618) 755 161.3 1.1e-38
NP_001186092 (OMIM: 601681) 26S protease regulator ( 398) 619 134.0 1.1e-30
NP_002796 (OMIM: 601681) 26S protease regulatory s ( 406) 619 134.0 1.1e-30
NP_002794 (OMIM: 154365) 26S protease regulatory s ( 433) 588 127.9 8.5e-29
NP_009057 (OMIM: 167320,601023,613954,616687) tran ( 806) 584 127.2 2.5e-28
XP_016876961 (OMIM: 602708) PREDICTED: 26S proteas ( 288) 564 123.0 1.6e-27
NP_002797 (OMIM: 602708) 26S protease regulatory s ( 403) 564 123.1 2.2e-27
NP_001317141 (OMIM: 602706) 26S protease regulator ( 367) 551 120.5 1.2e-26
XP_016876959 (OMIM: 602706) PREDICTED: 26S proteas ( 367) 551 120.5 1.2e-26
NP_002793 (OMIM: 602706) 26S protease regulatory s ( 440) 551 120.5 1.4e-26
NP_002795 (OMIM: 186852) 26S protease regulatory s ( 439) 543 118.9 4.3e-26
XP_016863318 (OMIM: 613940,616577) PREDICTED: sper ( 765) 538 118.0 1.4e-25
XP_011529980 (OMIM: 613940,616577) PREDICTED: sper ( 916) 538 118.1 1.6e-25
XP_016863314 (OMIM: 613940,616577) PREDICTED: sper ( 917) 538 118.1 1.6e-25
XP_016873515 (OMIM: 186852) PREDICTED: 26S proteas ( 461) 533 116.9 1.8e-25
XP_016856875 (OMIM: 602426) PREDICTED: nuclear val ( 738) 528 116.0 5.3e-25
NP_996671 (OMIM: 602426) nuclear valosin-containin ( 750) 528 116.0 5.4e-25
NP_001230076 (OMIM: 602426) nuclear valosin-contai ( 765) 528 116.0 5.5e-25
XP_016856872 (OMIM: 602426) PREDICTED: nuclear val ( 812) 528 116.0 5.8e-25
NP_002524 (OMIM: 602426) nuclear valosin-containin ( 856) 528 116.1 6.1e-25
NP_694546 (OMIM: 602707) 26S protease regulatory s ( 387) 523 114.9 6.1e-25
XP_016856868 (OMIM: 602426) PREDICTED: nuclear val ( 890) 528 116.1 6.3e-25
NP_006494 (OMIM: 602707) 26S protease regulatory s ( 418) 523 114.9 6.5e-25
XP_016863317 (OMIM: 613940,616577) PREDICTED: sper ( 819) 526 115.6 7.7e-25
NP_001332785 (OMIM: 613940,616577) spermatogenesis ( 892) 526 115.7 8.3e-25
NP_660208 (OMIM: 613940,616577) spermatogenesis-as ( 893) 526 115.7 8.3e-25
NP_955399 (OMIM: 602783,607259) paraplegin isoform ( 489) 522 114.7 8.6e-25
XP_016879088 (OMIM: 602783,607259) PREDICTED: para ( 489) 522 114.7 8.6e-25
XP_016863315 (OMIM: 613940,616577) PREDICTED: sper ( 859) 522 114.9 1.4e-24
XP_005256378 (OMIM: 602783,607259) PREDICTED: para ( 463) 516 113.5 1.9e-24
NP_001230075 (OMIM: 602426) nuclear valosin-contai ( 667) 517 113.8 2.2e-24
XP_011542501 (OMIM: 602426) PREDICTED: nuclear val ( 765) 517 113.8 2.5e-24
XP_011542502 (OMIM: 602426) PREDICTED: nuclear val ( 765) 517 113.8 2.5e-24
XP_011542500 (OMIM: 602426) PREDICTED: nuclear val ( 777) 517 113.8 2.5e-24
XP_016856871 (OMIM: 602426) PREDICTED: nuclear val ( 839) 517 113.9 2.7e-24
XP_016856870 (OMIM: 602426) PREDICTED: nuclear val ( 839) 517 113.9 2.7e-24
XP_011542498 (OMIM: 602426) PREDICTED: nuclear val ( 883) 517 113.9 2.8e-24
XP_016856869 (OMIM: 602426) PREDICTED: nuclear val ( 889) 517 113.9 2.9e-24
XP_016856867 (OMIM: 602426) PREDICTED: nuclear val ( 917) 517 113.9 2.9e-24
XP_005266861 (OMIM: 606696) PREDICTED: katanin p60 ( 491) 508 112.0 6e-24
NP_008975 (OMIM: 606696) katanin p60 ATPase-contai ( 491) 508 112.0 6e-24
>>NP_055078 (OMIM: 607472) ATP-dependent zinc metallopro (716 aa)
initn: 4629 init1: 4629 opt: 4629 Z-score: 4989.4 bits: 933.7 E(85289): 0
Smith-Waterman score: 4629; 100.0% identity (100.0% similar) in 716 aa overlap (1-716:1-716)
10 20 30 40 50 60
pF1KB3 MFSLSSTVQPQVTVPLSHLINAFHTPKNTSVSLSGVSVSQNQHRDVVPEHEAPSSEPSLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MFSLSSTVQPQVTVPLSHLINAFHTPKNTSVSLSGVSVSQNQHRDVVPEHEAPSSEPSLN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 LRDLGLSELKIGQIDQLVENLLPGFCKGKNISSHWHTSHVSAQSFFENKYGNLDIFSTLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 LRDLGLSELKIGQIDQLVENLLPGFCKGKNISSHWHTSHVSAQSFFENKYGNLDIFSTLR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 SSCLYRHHSRALQSICSDLQYWPVFIQSRGFKTLKSRTRRLQSTSERLAETQNIAPSFVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 SSCLYRHHSRALQSICSDLQYWPVFIQSRGFKTLKSRTRRLQSTSERLAETQNIAPSFVK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 GFLLRDRGSDVESLDKLMKTKNIPEAHQDAFKTGFAEGFLKAQALTQKTNDSLRRTRLIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 GFLLRDRGSDVESLDKLMKTKNIPEAHQDAFKTGFAEGFLKAQALTQKTNDSLRRTRLIL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 FVLLLFGIYGLLKNPFLSVRFRTTTGLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 FVLLLFGIYGLLKNPFLSVRFRTTTGLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 LKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 LKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 SRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 SRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGVI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB3 IIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDQSVDPEIIARG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 IIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDQSVDPEIIARG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB3 TVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEIDNKNKTITA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 TVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEIDNKNKTITA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB3 YHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDRWNETRAQLLAQMDVSMGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 YHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDRWNETRAQLLAQMDVSMGG
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB3 RVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTYSDTGKLSPETQSAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 RVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTYSDTGKLSPETQSAI
610 620 630 640 650 660
670 680 690 700 710
pF1KB3 EQEIRILLRDSYERAKHILKTHAKEHKNLAEALLTYETLDAKEIQIVLEGKKLEVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 EQEIRILLRDSYERAKHILKTHAKEHKNLAEALLTYETLDAKEIQIVLEGKKLEVR
670 680 690 700 710
>>NP_647473 (OMIM: 607472) ATP-dependent zinc metallopro (773 aa)
initn: 4282 init1: 4282 opt: 4285 Z-score: 4618.2 bits: 865.2 E(85289): 0
Smith-Waterman score: 4346; 92.4% identity (92.4% similar) in 748 aa overlap (26-716:26-773)
10 20 30 40 50
pF1KB3 MFSLSSTVQPQVTVPLSHLINAFHTPKNTSVSLSGVSVSQNQHRDVVPEHEAPSSE----
:::::::::::::::::::::::::::::::
NP_647 MFSLSSTVQPQVTVPLSHLINAFHTPKNTSVSLSGVSVSQNQHRDVVPEHEAPSSECMFS
10 20 30 40 50 60
60
pF1KB3 -----------------------------------------------------PSLNLRD
:::::::
NP_647 DFLTKLNIVSIGKGKIFEGYRSMFMEPAKRMKKSLDTTDNWHIRPEPFSLSIPPSLNLRD
70 80 90 100 110 120
70 80 90 100 110 120
pF1KB3 LGLSELKIGQIDQLVENLLPGFCKGKNISSHWHTSHVSAQSFFENKYGNLDIFSTLRSSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_647 LGLSELKIGQIDQLVENLLPGFCKGKNISSHWHTSHVSAQSFFENKYGNLDIFSTLRSSC
130 140 150 160 170 180
130 140 150 160 170 180
pF1KB3 LYRHHSRALQSICSDLQYWPVFIQSRGFKTLKSRTRRLQSTSERLAETQNIAPSFVKGFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_647 LYRHHSRALQSICSDLQYWPVFIQSRGFKTLKSRTRRLQSTSERLAETQNIAPSFVKGFL
190 200 210 220 230 240
190 200 210 220 230 240
pF1KB3 LRDRGSDVESLDKLMKTKNIPEAHQDAFKTGFAEGFLKAQALTQKTNDSLRRTRLILFVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_647 LRDRGSDVESLDKLMKTKNIPEAHQDAFKTGFAEGFLKAQALTQKTNDSLRRTRLILFVL
250 260 270 280 290 300
250 260 270 280 290 300
pF1KB3 LLFGIYGLLKNPFLSVRFRTTTGLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_647 LLFGIYGLLKNPFLSVRFRTTTGLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKN
310 320 330 340 350 360
310 320 330 340 350 360
pF1KB3 PQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_647 PQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRI
370 380 390 400 410 420
370 380 390 400 410 420
pF1KB3 RNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGVIIIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_647 RNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGVIIIG
430 440 450 460 470 480
430 440 450 460 470 480
pF1KB3 ATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDQSVDPEIIARGTVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_647 ATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDQSVDPEIIARGTVG
490 500 510 520 530 540
490 500 510 520 530 540
pF1KB3 FSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_647 FSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHE
550 560 570 580 590 600
550 560 570 580 590 600
pF1KB3 SGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDRWNETRAQLLAQMDVSMGGRVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_647 SGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDRWNETRAQLLAQMDVSMGGRVA
610 620 630 640 650 660
610 620 630 640 650 660
pF1KB3 EELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTYSDTGKLSPETQSAIEQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_647 EELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTYSDTGKLSPETQSAIEQE
670 680 690 700 710 720
670 680 690 700 710
pF1KB3 IRILLRDSYERAKHILKTHAKEHKNLAEALLTYETLDAKEIQIVLEGKKLEVR
:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_647 IRILLRDSYERAKHILKTHAKEHKNLAEALLTYETLDAKEIQIVLEGKKLEVR
730 740 750 760 770
>>NP_001240795 (OMIM: 607472) ATP-dependent zinc metallo (683 aa)
initn: 4379 init1: 3668 opt: 3669 Z-score: 3955.2 bits: 742.3 E(85289): 1.4e-213
Smith-Waterman score: 4317; 95.4% identity (95.4% similar) in 716 aa overlap (1-716:1-683)
10 20 30 40 50 60
pF1KB3 MFSLSSTVQPQVTVPLSHLINAFHTPKNTSVSLSGVSVSQNQHRDVVPEHEAPSSEPSLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MFSLSSTVQPQVTVPLSHLINAFHTPKNTSVSLSGVSVSQNQHRDVVPEHEAPSSEPSLN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 LRDLGLSELKIGQIDQLVENLLPGFCKGKNISSHWHTSHVSAQSFFENKYGNLDIFSTLR
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LRDLGLSELKIGQIDQLVENLLPGFCKGKNISSHWHTSHVSAQSFFENKY----------
70 80 90 100 110
130 140 150 160 170 180
pF1KB3 SSCLYRHHSRALQSICSDLQYWPVFIQSRGFKTLKSRTRRLQSTSERLAETQNIAPSFVK
:::::::::::::::::::::::::::::::::::::
NP_001 -----------------------VFIQSRGFKTLKSRTRRLQSTSERLAETQNIAPSFVK
120 130 140
190 200 210 220 230 240
pF1KB3 GFLLRDRGSDVESLDKLMKTKNIPEAHQDAFKTGFAEGFLKAQALTQKTNDSLRRTRLIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GFLLRDRGSDVESLDKLMKTKNIPEAHQDAFKTGFAEGFLKAQALTQKTNDSLRRTRLIL
150 160 170 180 190 200
250 260 270 280 290 300
pF1KB3 FVLLLFGIYGLLKNPFLSVRFRTTTGLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FVLLLFGIYGLLKNPFLSVRFRTTTGLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEF
210 220 230 240 250 260
310 320 330 340 350 360
pF1KB3 LKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGA
270 280 290 300 310 320
370 380 390 400 410 420
pF1KB3 SRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGVI
330 340 350 360 370 380
430 440 450 460 470 480
pF1KB3 IIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDQSVDPEIIARG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDQSVDPEIIARG
390 400 410 420 430 440
490 500 510 520 530 540
pF1KB3 TVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEIDNKNKTITA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEIDNKNKTITA
450 460 470 480 490 500
550 560 570 580 590 600
pF1KB3 YHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDRWNETRAQLLAQMDVSMGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDRWNETRAQLLAQMDVSMGG
510 520 530 540 550 560
610 620 630 640 650 660
pF1KB3 RVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTYSDTGKLSPETQSAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTYSDTGKLSPETQSAI
570 580 590 600 610 620
670 680 690 700 710
pF1KB3 EQEIRILLRDSYERAKHILKTHAKEHKNLAEALLTYETLDAKEIQIVLEGKKLEVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EQEIRILLRDSYERAKHILKTHAKEHKNLAEALLTYETLDAKEIQIVLEGKKLEVR
630 640 650 660 670 680
>>XP_011517602 (OMIM: 607472) PREDICTED: ATP-dependent z (740 aa)
initn: 4032 init1: 3668 opt: 3669 Z-score: 3954.6 bits: 742.3 E(85289): 1.6e-213
Smith-Waterman score: 4193; 88.4% identity (88.4% similar) in 773 aa overlap (1-716:1-740)
10 20 30 40 50
pF1KB3 MFSLSSTVQPQVTVPLSHLINAFHTPKNTSVSLSGVSVSQNQHRDVVPEHEAPSSE----
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MFSLSSTVQPQVTVPLSHLINAFHTPKNTSVSLSGVSVSQNQHRDVVPEHEAPSSECMFS
10 20 30 40 50 60
60
pF1KB3 -----------------------------------------------------PSLNLRD
:::::::
XP_011 DFLTKLNIVSIGKGKIFEGYRSMFMEPAKRMKKSLDTTDNWHIRPEPFSLSIPPSLNLRD
70 80 90 100 110 120
70 80 90 100 110 120
pF1KB3 LGLSELKIGQIDQLVENLLPGFCKGKNISSHWHTSHVSAQSFFENKYGNLDIFSTLRSSC
:::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LGLSELKIGQIDQLVENLLPGFCKGKNISSHWHTSHVSAQSFFENKY-------------
130 140 150 160
130 140 150 160 170 180
pF1KB3 LYRHHSRALQSICSDLQYWPVFIQSRGFKTLKSRTRRLQSTSERLAETQNIAPSFVKGFL
::::::::::::::::::::::::::::::::::::::::
XP_011 --------------------VFIQSRGFKTLKSRTRRLQSTSERLAETQNIAPSFVKGFL
170 180 190 200
190 200 210 220 230 240
pF1KB3 LRDRGSDVESLDKLMKTKNIPEAHQDAFKTGFAEGFLKAQALTQKTNDSLRRTRLILFVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRDRGSDVESLDKLMKTKNIPEAHQDAFKTGFAEGFLKAQALTQKTNDSLRRTRLILFVL
210 220 230 240 250 260
250 260 270 280 290 300
pF1KB3 LLFGIYGLLKNPFLSVRFRTTTGLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LLFGIYGLLKNPFLSVRFRTTTGLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKN
270 280 290 300 310 320
310 320 330 340 350 360
pF1KB3 PQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRI
330 340 350 360 370 380
370 380 390 400 410 420
pF1KB3 RNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGVIIIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGVIIIG
390 400 410 420 430 440
430 440 450 460 470 480
pF1KB3 ATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDQSVDPEIIARGTVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDQSVDPEIIARGTVG
450 460 470 480 490 500
490 500 510 520 530 540
pF1KB3 FSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHE
510 520 530 540 550 560
550 560 570 580 590 600
pF1KB3 SGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDRWNETRAQLLAQMDVSMGGRVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDRWNETRAQLLAQMDVSMGGRVA
570 580 590 600 610 620
610 620 630 640 650 660
pF1KB3 EELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTYSDTGKLSPETQSAIEQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTYSDTGKLSPETQSAIEQE
630 640 650 660 670 680
670 680 690 700 710
pF1KB3 IRILLRDSYERAKHILKTHAKEHKNLAEALLTYETLDAKEIQIVLEGKKLEVR
:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IRILLRDSYERAKHILKTHAKEHKNLAEALLTYETLDAKEIQIVLEGKKLEVR
690 700 710 720 730 740
>>NP_006787 (OMIM: 604581,610246,614487) AFG3-like prote (797 aa)
initn: 1138 init1: 495 opt: 1143 Z-score: 1232.0 bits: 238.7 E(85289): 6.9e-62
Smith-Waterman score: 1199; 43.7% identity (74.4% similar) in 449 aa overlap (278-712:304-748)
250 260 270 280 290 300
pF1KB3 IYGLLKNPFLSVRFRTTTGLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKF
.: :. : : :::: :..: :.:::::...
NP_006 GPAGIGRTGRGMGGLFSVGETTAKVLKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQY
280 290 300 310 320 330
310 320 330 340 350 360
pF1KB3 TILGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLF
::.:.::: .:.:::::::::::.:.::::.::: .::::: ::::::: .:.:.::
NP_006 QDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLF
340 350 360 370 380 390
370 380 390 400 410 420
pF1KB3 REAKANAPCVIFIDELDSVGGKRIESPMHPYSRQ--TINQLLAEMDGFKPNEGVIIIGAT
:. ::::..::::.:.:: :: .. . :.: :.::::.:::::. . .:.:...:
NP_006 ALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGT
400 410 420 430 440 450
430 440 450 460 470 480
pF1KB3 NFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDQSVDPEIIARG----T
: :. :: ::.:::::: :. . ::.:::. :.: .: .:.:.... . .:: :
NP_006 NRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLT
460 470 480 490 500 510
490 500 510 520 530 540
pF1KB3 VGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAY
:::::.. :. :.::: :: .. ...:..: . .... : :... .. ..: .::
NP_006 PGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAY
520 530 540 550 560 570
550 560 570 580 590 600
pF1KB3 HESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDRWNETRAQLLAQMDVSMGGR
::.:::. ..: . : :. :..:.::: ::... ::. ... :. ::: .: ...:::
NP_006 HEAGHAVAGWYLEHADPLLKVSIIPRGKGLGYAQYLPK-EQYLYTKEQLLDRMCMTLGGR
580 590 600 610 620 630
610 620 630 640 650
pF1KB3 VAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTYS--DTGKL------S
:.::..:: .:::::..:. ..:. : ....:::.::.: .... : . :
NP_006 VSEEIFFG--RITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKPYS
640 650 660 670 680 690
660 670 680 690 700 710
pF1KB3 PETQSAIEQEIRILLRDSYERAKHILKTHAKEHKNLAEALLTYETLDAKEIQIVLEGKKL
: :..:.:::. :.:.:. .: . . ...: :: :.:: ... . : : .
NP_006 EATARLIDDEVRILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDM-VELLGPRP
700 710 720 730 740
pF1KB3 EVR
NP_006 FAEKSTYEEFVEGTGSLDEDTSLPEGLKDWNKEREKEKEEPPGEKVAN
750 760 770 780 790
>>NP_003110 (OMIM: 602783,607259) paraplegin isoform 1 p (795 aa)
initn: 913 init1: 470 opt: 1015 Z-score: 1094.1 bits: 213.1 E(85289): 3.3e-54
Smith-Waterman score: 1076; 38.6% identity (73.5% similar) in 456 aa overlap (269-708:296-747)
240 250 260 270 280 290
pF1KB3 ILFVLLLFGIYGLLKNPFLSVRFRTTTGLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVV
. :: . :.:.:. : :..::: :..: :
NP_003 AILWYVFRLAGMTGREGGFSAFNQLKMARFTIVDGKMGKGVSFKDVAGMHEAKLEVREFV
270 280 290 300 310 320
300 310 320 330 340 350
pF1KB3 EFLKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGV
..::.:..: ::.:.::: ::.:::: ::::::.::: ::.::: .: :: :.. :.
NP_003 DYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGL
330 340 350 360 370 380
360 370 380 390 400 410
pF1KB3 GASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYS----RQTINQLLAEMDGFK
::.:.:.::.::.: :::...:::.:.:: :: . : .: .::.::::.::::.
NP_003 GAARVRSLFKEARARAPCIVYIDEIDAVGKKR-STTMSGFSNTEEEQTLNQLLVEMDGMG
390 400 410 420 430 440
420 430 440 450 460 470
pF1KB3 PNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDQSVD-
.. ::....:: . ::.::.::::.: .: . : .. : ::.. .:...:. ::
NP_003 TTDHVIVLASTNRADILDGALMRPGRLDRHVFIDLPTLQERREIFEQHLKSLKLTQSSTF
450 460 470 480 490 500
480 490 500 510 520 530
pF1KB3 -PEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEID
. .:. : :::::.. :. :.:::.:: .:. : ..:.. ...: : ..: ..
NP_003 YSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTLNFEYAVERVLAGTAKKSKILS
510 520 530 540 550 560
540 550 560 570 580 590
pF1KB3 NKNKTITAYHESGHAIIAYYTKDAMPINKATIMPR-GPTLGHVSLLPENDRWNETRAQLL
.... ..:.::::::..... . . . :..: :: . .:: ...::. :. :. ::.
NP_003 KEEQKVVAFHESGHALVGWMLEHTEAVMKVSITPRTNAALGFAQMLPR-DQHLFTKEQLF
570 580 590 600 610 620
600 610 620 630 640
pF1KB3 AQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTYSDT--
.: ...:::..: : : ...:.::..:. ..:.:: :: .:::. .: ... ..
NP_003 ERMCMALGGRASEALSF--NEVTSGAQDDLRKVTRIAYSMVKQFGMAPGIGPISFPEAQE
630 640 650 660 670 680
650 660 670 680 690 700
pF1KB3 -----GK--LSPETQSAIEQEIRILLRDSYERAKHILKTHAKEHKNLAEALLTYETLDAK
:. .: :. ...: :.:. .:......:. . . . ::.::: :... .
NP_003 GLMGIGRRPFSQGLQQMMDHEARLLVAKAYRHTEKVLQDNLDKLQALANALLEKEVINYE
690 700 710 720 730 740
710
pF1KB3 EIQIVLEGKKLEVR
.:. ..
NP_003 DIEALIGPPPHGPKKMIAPQRWIDAQREKQDLGEEETEETQQPPLGGEEPTWPK
750 760 770 780 790
>>XP_006721327 (OMIM: 602783,607259) PREDICTED: parapleg (809 aa)
initn: 913 init1: 470 opt: 1015 Z-score: 1094.0 bits: 213.2 E(85289): 3.4e-54
Smith-Waterman score: 1038; 39.5% identity (73.8% similar) in 428 aa overlap (269-680:296-719)
240 250 260 270 280 290
pF1KB3 ILFVLLLFGIYGLLKNPFLSVRFRTTTGLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVV
. :: . :.:.:. : :..::: :..: :
XP_006 AILWYVFRLAGMTGREGGFSAFNQLKMARFTIVDGKMGKGVSFKDVAGMHEAKLEVREFV
270 280 290 300 310 320
300 310 320 330 340 350
pF1KB3 EFLKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGV
..::.:..: ::.:.::: ::.:::: ::::::.::: ::.::: .: :: :.. :.
XP_006 DYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGL
330 340 350 360 370 380
360 370 380 390 400 410
pF1KB3 GASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYS----RQTINQLLAEMDGFK
::.:.:.::.::.: :::...:::.:.:: :: . : .: .::.::::.::::.
XP_006 GAARVRSLFKEARARAPCIVYIDEIDAVGKKR-STTMSGFSNTEEEQTLNQLLVEMDGMG
390 400 410 420 430 440
420 430 440 450 460 470
pF1KB3 PNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDQSVD-
.. ::....:: . ::.::.::::.: .: . : .. : ::.. .:...:. ::
XP_006 TTDHVIVLASTNRADILDGALMRPGRLDRHVFIDLPTLQERREIFEQHLKSLKLTQSSTF
450 460 470 480 490 500
480 490 500 510 520 530
pF1KB3 -PEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEID
. .:. : :::::.. :. :.:::.:: .:. : ..:.. ...: : ..: ..
XP_006 YSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTLNFEYAVERVLAGTAKKSKILS
510 520 530 540 550 560
540 550 560 570 580 590
pF1KB3 NKNKTITAYHESGHAIIAYYTKDAMPINKATIMPR-GPTLGHVSLLPENDRWNETRAQLL
.... ..:.::::::..... . . . :..: :: . .:: ...::. :. :. ::.
XP_006 KEEQKVVAFHESGHALVGWMLEHTEAVMKVSITPRTNAALGFAQMLPR-DQHLFTKEQLF
570 580 590 600 610 620
600 610 620 630 640
pF1KB3 AQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTYSDT--
.: ...:::..: : : ...:.::..:. ..:.:: :: .:::. .: ... ..
XP_006 ERMCMALGGRASEALSF--NEVTSGAQDDLRKVTRIAYSMVKQFGMAPGIGPISFPEAQE
630 640 650 660 670 680
650 660 670 680 690 700
pF1KB3 -----GK--LSPETQSAIEQEIRILLRDSYERAKHILKTHAKEHKNLAEALLTYETLDAK
:. .: :. ...: :.:. .:......:.
XP_006 GLMGIGRRPFSQGLQQMMDHEARLLVAKAYRHTEKVLQDNLDKLQARALCVTWGSCLGPL
690 700 710 720 730 740
710
pF1KB3 EIQIVLEGKKLEVR
XP_006 DCRPQPAAAASGQVWAVPSPAEAGLPVDPCSSRLTKQLCRARAHHSGSHNGSKAAAGKRP
750 760 770 780 790 800
>>XP_011523903 (OMIM: 604581,610246,614487) PREDICTED: A (730 aa)
initn: 955 init1: 496 opt: 928 Z-score: 1000.9 bits: 195.8 E(85289): 5.2e-49
Smith-Waterman score: 928; 47.1% identity (76.3% similar) in 308 aa overlap (278-578:304-611)
250 260 270 280 290 300
pF1KB3 IYGLLKNPFLSVRFRTTTGLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKF
.: :. : : :::: :..: :.:::::...
XP_011 GPAGIGRTGRGMGGLFSVGETTAKVLKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQY
280 290 300 310 320 330
310 320 330 340 350 360
pF1KB3 TILGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLF
::.:.::: .:.:::::::::::.:.::::.::: .::::: ::::::: .:.:.::
XP_011 QDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLF
340 350 360 370 380 390
370 380 390 400 410 420
pF1KB3 REAKANAPCVIFIDELDSVGGKRIESPMHPYSRQ--TINQLLAEMDGFKPNEGVIIIGAT
:. ::::..::::.:.:: :: .. . :.: :.::::.:::::. . .:.:...:
XP_011 ALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGT
400 410 420 430 440 450
430 440 450 460 470 480
pF1KB3 NFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDQSVDPEIIARG----T
: :. :: ::.:::::: :. . ::.:::. :.: .: .:.:.... . .:: :
XP_011 NRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLT
460 470 480 490 500 510
490 500 510 520 530 540
pF1KB3 VGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAY
:::::.. :. :.::: :: .. ...:..: . .... : :... .. ..: .::
XP_011 PGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAY
520 530 540 550 560 570
550 560 570 580 590 600
pF1KB3 HESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSL-LPENDRWNETRAQLLAQMDVSMGG
::.:::. ..: . : :. : . . . .:..:. ::
XP_011 HEAGHAVAGWYLEHADPLLKIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARLIDDE
580 590 600 610 620 630
610 620 630 640 650 660
pF1KB3 RVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTYSDTGKLSPETQSAI
XP_011 VRILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDMVELLGPRPFAEKSTYEEFV
640 650 660 670 680 690
>>XP_016879087 (OMIM: 602783,607259) PREDICTED: parapleg (561 aa)
initn: 742 init1: 470 opt: 755 Z-score: 816.3 bits: 161.2 E(85289): 1e-38
Smith-Waterman score: 755; 46.3% identity (76.1% similar) in 259 aa overlap (269-521:296-553)
240 250 260 270 280 290
pF1KB3 ILFVLLLFGIYGLLKNPFLSVRFRTTTGLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVV
. :: . :.:.:. : :..::: :..: :
XP_016 AILWYVFRLAGMTGREGGFSAFNQLKMARFTIVDGKMGKGVSFKDVAGMHEAKLEVREFV
270 280 290 300 310 320
300 310 320 330 340 350
pF1KB3 EFLKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGV
..::.:..: ::.:.::: ::.:::: ::::::.::: ::.::: .: :: :.. :.
XP_016 DYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGL
330 340 350 360 370 380
360 370 380 390 400 410
pF1KB3 GASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYS----RQTINQLLAEMDGFK
::.:.:.::.::.: :::...:::.:.:: :: . : .: .::.::::.::::.
XP_016 GAARVRSLFKEARARAPCIVYIDEIDAVGKKR-STTMSGFSNTEEEQTLNQLLVEMDGMG
390 400 410 420 430 440
420 430 440 450 460 470
pF1KB3 PNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDQSVD-
.. ::....:: . ::.::.::::.: .: . : .. : ::.. .:...:. ::
XP_016 TTDHVIVLASTNRADILDGALMRPGRLDRHVFIDLPTLQERREIFEQHLKSLKLTQSSTF
450 460 470 480 490 500
480 490 500 510 520 530
pF1KB3 -PEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEID
. .:. : :::::.. :. :.:::.:: .:. : ..:.. ...:
XP_016 YSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTLNFEYAVERVLAVWGLRRL
510 520 530 540 550 560
540 550 560 570 580 590
pF1KB3 NKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDRWNETRAQLLA
>>XP_016879086 (OMIM: 602783,607259) PREDICTED: parapleg (618 aa)
initn: 742 init1: 470 opt: 755 Z-score: 815.6 bits: 161.3 E(85289): 1.1e-38
Smith-Waterman score: 755; 46.3% identity (76.1% similar) in 259 aa overlap (269-521:296-553)
240 250 260 270 280 290
pF1KB3 ILFVLLLFGIYGLLKNPFLSVRFRTTTGLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVV
. :: . :.:.:. : :..::: :..: :
XP_016 AILWYVFRLAGMTGREGGFSAFNQLKMARFTIVDGKMGKGVSFKDVAGMHEAKLEVREFV
270 280 290 300 310 320
300 310 320 330 340 350
pF1KB3 EFLKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGV
..::.:..: ::.:.::: ::.:::: ::::::.::: ::.::: .: :: :.. :.
XP_016 DYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGL
330 340 350 360 370 380
360 370 380 390 400 410
pF1KB3 GASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYS----RQTINQLLAEMDGFK
::.:.:.::.::.: :::...:::.:.:: :: . : .: .::.::::.::::.
XP_016 GAARVRSLFKEARARAPCIVYIDEIDAVGKKR-STTMSGFSNTEEEQTLNQLLVEMDGMG
390 400 410 420 430 440
420 430 440 450 460 470
pF1KB3 PNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDQSVD-
.. ::....:: . ::.::.::::.: .: . : .. : ::.. .:...:. ::
XP_016 TTDHVIVLASTNRADILDGALMRPGRLDRHVFIDLPTLQERREIFEQHLKSLKLTQSSTF
450 460 470 480 490 500
480 490 500 510 520 530
pF1KB3 -PEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEID
. .:. : :::::.. :. :.:::.:: .:. : ..:.. ...:
XP_016 YSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTLNFEYAVERVLAAWVWWAQPSP
510 520 530 540 550 560
540 550 560 570 580 590
pF1KB3 NKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDRWNETRAQLLA
XP_016 SLMGAELQPLTVGRRAAAARGCGGTAVLSAQQGLCGEVWICSTTSGETHGPDRQ
570 580 590 600 610
716 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 20:36:48 2016 done: Thu Nov 3 20:36:50 2016
Total Scan time: 10.760 Total Display time: 0.160
Function used was FASTA [36.3.4 Apr, 2011]