Result of FASTA (omim) for
pF1KB3100
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3100, 856 aa
1>>>pF1KB3100 856 - 856 aa - 856 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 14.2789+/-0.000488; mu= -16.4963+/- 0.031
mean_var=760.6304+/-158.069, 0's: 0 Z-trim(124.3): 54 B-trim: 0 in 0/61
Lambda= 0.046504
statistics sampled from 45673 (45738) to 45673 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.793), E-opt: 0.2 (0.536), width: 16
Scan time: 15.880
The best scores are: opt bits E(85289)
NP_008971 (OMIM: 605800) heterogeneous nuclear rib ( 856) 6054 422.0 5.7e-117
XP_005258516 (OMIM: 605800) PREDICTED: heterogeneo ( 866) 5462 382.3 5.2e-105
NP_001287945 (OMIM: 605800) heterogeneous nuclear ( 767) 5376 376.5 2.6e-103
NP_001308137 (OMIM: 605800) heterogeneous nuclear ( 756) 5371 376.1 3.3e-103
NP_653333 (OMIM: 605800) heterogeneous nuclear rib ( 756) 5371 376.1 3.3e-103
NP_001308140 (OMIM: 605800) heterogeneous nuclear ( 756) 5371 376.1 3.3e-103
XP_011524694 (OMIM: 605800) PREDICTED: heterogeneo ( 792) 5310 372.1 5.7e-102
XP_005258518 (OMIM: 605800) PREDICTED: heterogeneo ( 777) 4784 336.8 2.4e-91
XP_011524697 (OMIM: 605800) PREDICTED: heterogeneo ( 766) 4779 336.4 3e-91
XP_005258520 (OMIM: 605800) PREDICTED: heterogeneo ( 766) 4779 336.4 3e-91
XP_011524695 (OMIM: 605800) PREDICTED: heterogeneo ( 766) 4779 336.4 3e-91
XP_011524696 (OMIM: 605800) PREDICTED: heterogeneo ( 766) 4779 336.4 3e-91
XP_005258522 (OMIM: 605800) PREDICTED: heterogeneo ( 766) 4779 336.4 3e-91
XP_005258521 (OMIM: 605800) PREDICTED: heterogeneo ( 766) 4779 336.4 3e-91
XP_016856604 (OMIM: 602869) PREDICTED: heterogeneo ( 825) 1991 149.4 6.3e-35
XP_016856605 (OMIM: 602869) PREDICTED: heterogeneo ( 825) 1991 149.4 6.3e-35
NP_114032 (OMIM: 602869) heterogeneous nuclear rib ( 825) 1991 149.4 6.3e-35
XP_016856606 (OMIM: 602869) PREDICTED: heterogeneo ( 806) 1966 147.7 2e-34
NP_004492 (OMIM: 602869) heterogeneous nuclear rib ( 806) 1966 147.7 2e-34
>>NP_008971 (OMIM: 605800) heterogeneous nuclear ribonuc (856 aa)
initn: 6054 init1: 6054 opt: 6054 Z-score: 2221.0 bits: 422.0 E(85289): 5.7e-117
Smith-Waterman score: 6054; 100.0% identity (100.0% similar) in 856 aa overlap (1-856:1-856)
10 20 30 40 50 60
pF1KB3 MDVRRLKVNELREELQRRGLDTRGLKAELAERLQAALEAEEPDDERELDADDEPGRPGHI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 MDVRRLKVNELREELQRRGLDTRGLKAELAERLQAALEAEEPDDERELDADDEPGRPGHI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 NEEVETEGGSELEGTAQPPPPGLQPHAEPGGYSGPDGHYAMDNITRQNQFYDTQVIKQEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 NEEVETEGGSELEGTAQPPPPGLQPHAEPGGYSGPDGHYAMDNITRQNQFYDTQVIKQEN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 ESGYERRPLEMEQQQAYRPEMKTEMKQGAPTSFLPPEASQLKPDRQQFQSRKRPYEENRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 ESGYERRPLEMEQQQAYRPEMKTEMKQGAPTSFLPPEASQLKPDRQQFQSRKRPYEENRG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 RGYFEHREDRRGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFKVARDRSSGYPLTIEGFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 RGYFEHREDRRGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFKVARDRSSGYPLTIEGFA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 YLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGEEPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 YLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGEEPF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 SYGYGGTGKKSTNSRFENYGDKFAENDVIGCFADFECGNDVELSFTKNGKWMGIAFRIQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 SYGYGGTGKKSTNSRFENYGDKFAENDVIGCFADFECGNDVELSFTKNGKWMGIAFRIQK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 EALGGQALYPHVLVKNCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPKSKAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 EALGGQALYPHVLVKNCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPKSKAE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB3 CEILMMVGLPAAGKTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 CEILMMVGLPAAGKTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB3 IQQATQCLNRLIQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 IQQATQCLNRLIQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKD
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB3 RTIKRTDEEGKDVPDHAVLEMKANFTLPDVGDFLDEVLFIELQREEADKLVRQYNEEGRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 RTIKRTDEEGKDVPDHAVLEMKANFTLPDVGDFLDEVLFIELQREEADKLVRQYNEEGRK
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB3 AGPPPEKRFDNRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 AGPPPEKRFDNRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFN
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB3 RSGGGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPPSYSPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 RSGGGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPPSYSPA
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB3 RNPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 RNPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPP
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB3 PPAYNYGSYGGYNPAPYTPPPPPTAQTYPQPSYNQYQQYAQQWNQYYQNQGQWPPYYGNY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 PPAYNYGSYGGYNPAPYTPPPPPTAQTYPQPSYNQYQQYAQQWNQYYQNQGQWPPYYGNY
790 800 810 820 830 840
850
pF1KB3 DYGSYSGNTQGGTSTQ
::::::::::::::::
NP_008 DYGSYSGNTQGGTSTQ
850
>>XP_005258516 (OMIM: 605800) PREDICTED: heterogeneous n (866 aa)
initn: 5578 init1: 5285 opt: 5462 Z-score: 2006.3 bits: 382.3 E(85289): 5.2e-105
Smith-Waterman score: 6024; 98.8% identity (98.8% similar) in 866 aa overlap (1-856:1-866)
10 20 30 40 50 60
pF1KB3 MDVRRLKVNELREELQRRGLDTRGLKAELAERLQAALEAEEPDDERELDADDEPGRPGHI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MDVRRLKVNELREELQRRGLDTRGLKAELAERLQAALEAEEPDDERELDADDEPGRPGHI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 NEEVETEGGSELEGTAQPPPPGLQPHAEPGGYSGPDGHYAMDNITRQNQFYDTQVIKQEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NEEVETEGGSELEGTAQPPPPGLQPHAEPGGYSGPDGHYAMDNITRQNQFYDTQVIKQEN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 ESGYERRPLEMEQQQAYRPEMKTEMKQGAPTSFLPPEASQLKPDRQQFQSRKRPYEENRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ESGYERRPLEMEQQQAYRPEMKTEMKQGAPTSFLPPEASQLKPDRQQFQSRKRPYEENRG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 RGYFEHREDRRGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFKVARDRSSGYPLTIEGFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RGYFEHREDRRGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFKVARDRSSGYPLTIEGFA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 YLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGEEPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGEEPF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 SYGYGGTGKKSTNSRFENYGDKFAENDVIGCFADFECGNDVELSFTKNGKWMGIAFRIQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SYGYGGTGKKSTNSRFENYGDKFAENDVIGCFADFECGNDVELSFTKNGKWMGIAFRIQK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 EALGGQALYPHVLVKNCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPKSKAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EALGGQALYPHVLVKNCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPKSKAE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB3 CEILMMVGLPAAGKTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CEILMMVGLPAAGKTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB3 IQQATQCLNRLIQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IQQATQCLNRLIQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKD
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB3 RTIKRTDEEGKDVPDHAVLEMKANFTLPDVGDFLDEVLFIELQREEADKLVRQYNEEGRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RTIKRTDEEGKDVPDHAVLEMKANFTLPDVGDFLDEVLFIELQREEADKLVRQYNEEGRK
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB3 AGPPPEKRFDNRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AGPPPEKRFDNRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFN
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB3 RSGGGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPPSYSPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RSGGGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPPSYSPA
670 680 690 700 710 720
730 740 750 760 770
pF1KB3 RNPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQ----------PSYSQPPYNQGGYSQG
:::::::::::::::::::::::::::::::::: ::::::::::::::::
XP_005 RNPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQSFGFFPSTFQPSYSQPPYNQGGYSQG
730 740 750 760 770 780
780 790 800 810 820 830
pF1KB3 YTAPPPPPPPPPAYNYGSYGGYNPAPYTPPPPPTAQTYPQPSYNQYQQYAQQWNQYYQNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YTAPPPPPPPPPAYNYGSYGGYNPAPYTPPPPPTAQTYPQPSYNQYQQYAQQWNQYYQNQ
790 800 810 820 830 840
840 850
pF1KB3 GQWPPYYGNYDYGSYSGNTQGGTSTQ
::::::::::::::::::::::::::
XP_005 GQWPPYYGNYDYGSYSGNTQGGTSTQ
850 860
>>NP_001287945 (OMIM: 605800) heterogeneous nuclear ribo (767 aa)
initn: 5376 init1: 5376 opt: 5376 Z-score: 1975.7 bits: 376.5 E(85289): 2.6e-103
Smith-Waterman score: 5376; 100.0% identity (100.0% similar) in 757 aa overlap (100-856:11-767)
70 80 90 100 110 120
pF1KB3 SELEGTAQPPPPGLQPHAEPGGYSGPDGHYAMDNITRQNQFYDTQVIKQENESGYERRPL
::::::::::::::::::::::::::::::
NP_001 MRSWAFSYLDAMDNITRQNQFYDTQVIKQENESGYERRPL
10 20 30 40
130 140 150 160 170 180
pF1KB3 EMEQQQAYRPEMKTEMKQGAPTSFLPPEASQLKPDRQQFQSRKRPYEENRGRGYFEHRED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EMEQQQAYRPEMKTEMKQGAPTSFLPPEASQLKPDRQQFQSRKRPYEENRGRGYFEHRED
50 60 70 80 90 100
190 200 210 220 230 240
pF1KB3 RRGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RRGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARAS
110 120 130 140 150 160
250 260 270 280 290 300
pF1KB3 YGVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGEEPFSYGYGGTGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YGVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGEEPFSYGYGGTGK
170 180 190 200 210 220
310 320 330 340 350 360
pF1KB3 KSTNSRFENYGDKFAENDVIGCFADFECGNDVELSFTKNGKWMGIAFRIQKEALGGQALY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KSTNSRFENYGDKFAENDVIGCFADFECGNDVELSFTKNGKWMGIAFRIQKEALGGQALY
230 240 250 260 270 280
370 380 390 400 410 420
pF1KB3 PHVLVKNCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPKSKAECEILMMVGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PHVLVKNCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPKSKAECEILMMVGL
290 300 310 320 330 340
430 440 450 460 470 480
pF1KB3 PAAGKTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PAAGKTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLN
350 360 370 380 390 400
490 500 510 520 530 540
pF1KB3 RLIQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RLIQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEE
410 420 430 440 450 460
550 560 570 580 590 600
pF1KB3 GKDVPDHAVLEMKANFTLPDVGDFLDEVLFIELQREEADKLVRQYNEEGRKAGPPPEKRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GKDVPDHAVLEMKANFTLPDVGDFLDEVLFIELQREEADKLVRQYNEEGRKAGPPPEKRF
470 480 490 500 510 520
610 620 630 640 650 660
pF1KB3 DNRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFNRSGGGGYSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DNRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFNRSGGGGYSQ
530 540 550 560 570 580
670 680 690 700 710 720
pF1KB3 NRWGNNNRDNNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NRWGNNNRDNNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTY
590 600 610 620 630 640
730 740 750 760 770 780
pF1KB3 NKNSNIPGSSANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NKNSNIPGSSANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSY
650 660 670 680 690 700
790 800 810 820 830 840
pF1KB3 GGYNPAPYTPPPPPTAQTYPQPSYNQYQQYAQQWNQYYQNQGQWPPYYGNYDYGSYSGNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGYNPAPYTPPPPPTAQTYPQPSYNQYQQYAQQWNQYYQNQGQWPPYYGNYDYGSYSGNT
710 720 730 740 750 760
850
pF1KB3 QGGTSTQ
:::::::
NP_001 QGGTSTQ
>>NP_001308137 (OMIM: 605800) heterogeneous nuclear ribo (756 aa)
initn: 5371 init1: 5371 opt: 5371 Z-score: 1974.0 bits: 376.1 E(85289): 3.3e-103
Smith-Waterman score: 5371; 100.0% identity (100.0% similar) in 756 aa overlap (101-856:1-756)
80 90 100 110 120 130
pF1KB3 ELEGTAQPPPPGLQPHAEPGGYSGPDGHYAMDNITRQNQFYDTQVIKQENESGYERRPLE
::::::::::::::::::::::::::::::
NP_001 MDNITRQNQFYDTQVIKQENESGYERRPLE
10 20 30
140 150 160 170 180 190
pF1KB3 MEQQQAYRPEMKTEMKQGAPTSFLPPEASQLKPDRQQFQSRKRPYEENRGRGYFEHREDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEQQQAYRPEMKTEMKQGAPTSFLPPEASQLKPDRQQFQSRKRPYEENRGRGYFEHREDR
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB3 RGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASY
100 110 120 130 140 150
260 270 280 290 300 310
pF1KB3 GVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGEEPFSYGYGGTGKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGEEPFSYGYGGTGKK
160 170 180 190 200 210
320 330 340 350 360 370
pF1KB3 STNSRFENYGDKFAENDVIGCFADFECGNDVELSFTKNGKWMGIAFRIQKEALGGQALYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 STNSRFENYGDKFAENDVIGCFADFECGNDVELSFTKNGKWMGIAFRIQKEALGGQALYP
220 230 240 250 260 270
380 390 400 410 420 430
pF1KB3 HVLVKNCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPKSKAECEILMMVGLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HVLVKNCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPKSKAECEILMMVGLP
280 290 300 310 320 330
440 450 460 470 480 490
pF1KB3 AAGKTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AAGKTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNR
340 350 360 370 380 390
500 510 520 530 540 550
pF1KB3 LIQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LIQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEG
400 410 420 430 440 450
560 570 580 590 600 610
pF1KB3 KDVPDHAVLEMKANFTLPDVGDFLDEVLFIELQREEADKLVRQYNEEGRKAGPPPEKRFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KDVPDHAVLEMKANFTLPDVGDFLDEVLFIELQREEADKLVRQYNEEGRKAGPPPEKRFD
460 470 480 490 500 510
620 630 640 650 660 670
pF1KB3 NRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFNRSGGGGYSQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFNRSGGGGYSQN
520 530 540 550 560 570
680 690 700 710 720 730
pF1KB3 RWGNNNRDNNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTYN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RWGNNNRDNNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTYN
580 590 600 610 620 630
740 750 760 770 780 790
pF1KB3 KNSNIPGSSANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KNSNIPGSSANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSYG
640 650 660 670 680 690
800 810 820 830 840 850
pF1KB3 GYNPAPYTPPPPPTAQTYPQPSYNQYQQYAQQWNQYYQNQGQWPPYYGNYDYGSYSGNTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GYNPAPYTPPPPPTAQTYPQPSYNQYQQYAQQWNQYYQNQGQWPPYYGNYDYGSYSGNTQ
700 710 720 730 740 750
pF1KB3 GGTSTQ
::::::
NP_001 GGTSTQ
>>NP_653333 (OMIM: 605800) heterogeneous nuclear ribonuc (756 aa)
initn: 5371 init1: 5371 opt: 5371 Z-score: 1974.0 bits: 376.1 E(85289): 3.3e-103
Smith-Waterman score: 5371; 100.0% identity (100.0% similar) in 756 aa overlap (101-856:1-756)
80 90 100 110 120 130
pF1KB3 ELEGTAQPPPPGLQPHAEPGGYSGPDGHYAMDNITRQNQFYDTQVIKQENESGYERRPLE
::::::::::::::::::::::::::::::
NP_653 MDNITRQNQFYDTQVIKQENESGYERRPLE
10 20 30
140 150 160 170 180 190
pF1KB3 MEQQQAYRPEMKTEMKQGAPTSFLPPEASQLKPDRQQFQSRKRPYEENRGRGYFEHREDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_653 MEQQQAYRPEMKTEMKQGAPTSFLPPEASQLKPDRQQFQSRKRPYEENRGRGYFEHREDR
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB3 RGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_653 RGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASY
100 110 120 130 140 150
260 270 280 290 300 310
pF1KB3 GVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGEEPFSYGYGGTGKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_653 GVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGEEPFSYGYGGTGKK
160 170 180 190 200 210
320 330 340 350 360 370
pF1KB3 STNSRFENYGDKFAENDVIGCFADFECGNDVELSFTKNGKWMGIAFRIQKEALGGQALYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_653 STNSRFENYGDKFAENDVIGCFADFECGNDVELSFTKNGKWMGIAFRIQKEALGGQALYP
220 230 240 250 260 270
380 390 400 410 420 430
pF1KB3 HVLVKNCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPKSKAECEILMMVGLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_653 HVLVKNCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPKSKAECEILMMVGLP
280 290 300 310 320 330
440 450 460 470 480 490
pF1KB3 AAGKTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_653 AAGKTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNR
340 350 360 370 380 390
500 510 520 530 540 550
pF1KB3 LIQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_653 LIQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEG
400 410 420 430 440 450
560 570 580 590 600 610
pF1KB3 KDVPDHAVLEMKANFTLPDVGDFLDEVLFIELQREEADKLVRQYNEEGRKAGPPPEKRFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_653 KDVPDHAVLEMKANFTLPDVGDFLDEVLFIELQREEADKLVRQYNEEGRKAGPPPEKRFD
460 470 480 490 500 510
620 630 640 650 660 670
pF1KB3 NRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFNRSGGGGYSQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_653 NRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFNRSGGGGYSQN
520 530 540 550 560 570
680 690 700 710 720 730
pF1KB3 RWGNNNRDNNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTYN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_653 RWGNNNRDNNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTYN
580 590 600 610 620 630
740 750 760 770 780 790
pF1KB3 KNSNIPGSSANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_653 KNSNIPGSSANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSYG
640 650 660 670 680 690
800 810 820 830 840 850
pF1KB3 GYNPAPYTPPPPPTAQTYPQPSYNQYQQYAQQWNQYYQNQGQWPPYYGNYDYGSYSGNTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_653 GYNPAPYTPPPPPTAQTYPQPSYNQYQQYAQQWNQYYQNQGQWPPYYGNYDYGSYSGNTQ
700 710 720 730 740 750
pF1KB3 GGTSTQ
::::::
NP_653 GGTSTQ
>>NP_001308140 (OMIM: 605800) heterogeneous nuclear ribo (756 aa)
initn: 5371 init1: 5371 opt: 5371 Z-score: 1974.0 bits: 376.1 E(85289): 3.3e-103
Smith-Waterman score: 5371; 100.0% identity (100.0% similar) in 756 aa overlap (101-856:1-756)
80 90 100 110 120 130
pF1KB3 ELEGTAQPPPPGLQPHAEPGGYSGPDGHYAMDNITRQNQFYDTQVIKQENESGYERRPLE
::::::::::::::::::::::::::::::
NP_001 MDNITRQNQFYDTQVIKQENESGYERRPLE
10 20 30
140 150 160 170 180 190
pF1KB3 MEQQQAYRPEMKTEMKQGAPTSFLPPEASQLKPDRQQFQSRKRPYEENRGRGYFEHREDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEQQQAYRPEMKTEMKQGAPTSFLPPEASQLKPDRQQFQSRKRPYEENRGRGYFEHREDR
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB3 RGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASY
100 110 120 130 140 150
260 270 280 290 300 310
pF1KB3 GVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGEEPFSYGYGGTGKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGEEPFSYGYGGTGKK
160 170 180 190 200 210
320 330 340 350 360 370
pF1KB3 STNSRFENYGDKFAENDVIGCFADFECGNDVELSFTKNGKWMGIAFRIQKEALGGQALYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 STNSRFENYGDKFAENDVIGCFADFECGNDVELSFTKNGKWMGIAFRIQKEALGGQALYP
220 230 240 250 260 270
380 390 400 410 420 430
pF1KB3 HVLVKNCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPKSKAECEILMMVGLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HVLVKNCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPKSKAECEILMMVGLP
280 290 300 310 320 330
440 450 460 470 480 490
pF1KB3 AAGKTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AAGKTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNR
340 350 360 370 380 390
500 510 520 530 540 550
pF1KB3 LIQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LIQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEG
400 410 420 430 440 450
560 570 580 590 600 610
pF1KB3 KDVPDHAVLEMKANFTLPDVGDFLDEVLFIELQREEADKLVRQYNEEGRKAGPPPEKRFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KDVPDHAVLEMKANFTLPDVGDFLDEVLFIELQREEADKLVRQYNEEGRKAGPPPEKRFD
460 470 480 490 500 510
620 630 640 650 660 670
pF1KB3 NRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFNRSGGGGYSQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFNRSGGGGYSQN
520 530 540 550 560 570
680 690 700 710 720 730
pF1KB3 RWGNNNRDNNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTYN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RWGNNNRDNNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTYN
580 590 600 610 620 630
740 750 760 770 780 790
pF1KB3 KNSNIPGSSANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KNSNIPGSSANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSYG
640 650 660 670 680 690
800 810 820 830 840 850
pF1KB3 GYNPAPYTPPPPPTAQTYPQPSYNQYQQYAQQWNQYYQNQGQWPPYYGNYDYGSYSGNTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GYNPAPYTPPPPPTAQTYPQPSYNQYQQYAQQWNQYYQNQGQWPPYYGNYDYGSYSGNTQ
700 710 720 730 740 750
pF1KB3 GGTSTQ
::::::
NP_001 GGTSTQ
>>XP_011524694 (OMIM: 605800) PREDICTED: heterogeneous n (792 aa)
initn: 5262 init1: 5262 opt: 5310 Z-score: 1951.6 bits: 372.1 E(85289): 5.7e-102
Smith-Waterman score: 5413; 92.5% identity (92.5% similar) in 856 aa overlap (1-856:1-792)
10 20 30 40 50 60
pF1KB3 MDVRRLKVNELREELQRRGLDTRGLKAELAERLQAALEAEEPDDERELDADDEPGRPGHI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MDVRRLKVNELREELQRRGLDTRGLKAELAERLQAALEAEEPDDERELDADDEPGRPGHI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 NEEVETEGGSELEGTAQPPPPGLQPHAEPGGYSGPDGHYAMDNITRQNQFYDTQVIKQEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NEEVETEGGSELEGTAQPPPPGLQPHAEPGGYSGPDGHYAMDNITRQNQFYDTQVIKQEN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 ESGYERRPLEMEQQQAYRPEMKTEMKQGAPTSFLPPEASQLKPDRQQFQSRKRPYEENRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ESGYERRPLEMEQQQAYRPEMKTEMKQGAPTSFLPPEASQLKPDRQQFQSRKRPYEENRG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 RGYFEHREDRRGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFKVARDRSSGYPLTIEGFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RGYFEHREDRRGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFKVARDRSSGYPLTIEGFA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 YLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGEEPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGEEPF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 SYGYGGTGKKSTNSRFENYGDKFAENDVIGCFADFECGNDVELSFTKNGKWMGIAFRIQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SYGYGGTGKKSTNSRFENYGDKFAENDVIGCFADFECGNDVELSFTKNGKWMGIAFRIQK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 EALGGQALYPHVLVKNCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPKSKAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EALGGQALYPHVLVKNCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPKSKAE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB3 CEILMMVGLPAAGKTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CEILMMVGLPAAGKTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB3 IQQATQCLNRLIQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IQQATQCLNRLIQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKD
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB3 RTIKRTDEEGKDVPDHAVLEMKANFTLPDVGDFLDEVLFIELQREEADKLVRQYNEEGRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RTIKRTDEEGKDVPDHAVLEMKANFTLPDVGDFLDEVLFIELQREEADKLVRQYNEEGRK
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB3 AGPPPEKRFDNRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AGPPPEKRFDNRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFN
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB3 RSGGGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPPSYSPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RSGGGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPPSYSPA
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB3 RNPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPP
::::::::::::::::::::::::::::::::::
XP_011 RNPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQ--------------------------
730 740 750
790 800 810 820 830 840
pF1KB3 PPAYNYGSYGGYNPAPYTPPPPPTAQTYPQPSYNQYQQYAQQWNQYYQNQGQWPPYYGNY
::::::::::::::::::::::
XP_011 --------------------------------------YAQQWNQYYQNQGQWPPYYGNY
760 770
850
pF1KB3 DYGSYSGNTQGGTSTQ
::::::::::::::::
XP_011 DYGSYSGNTQGGTSTQ
780 790
>>XP_005258518 (OMIM: 605800) PREDICTED: heterogeneous n (777 aa)
initn: 4900 init1: 4607 opt: 4784 Z-score: 1761.0 bits: 336.8 E(85289): 2.4e-91
Smith-Waterman score: 5346; 98.7% identity (98.7% similar) in 767 aa overlap (100-856:11-777)
70 80 90 100 110 120
pF1KB3 SELEGTAQPPPPGLQPHAEPGGYSGPDGHYAMDNITRQNQFYDTQVIKQENESGYERRPL
::::::::::::::::::::::::::::::
XP_005 MRSWAFSYLDAMDNITRQNQFYDTQVIKQENESGYERRPL
10 20 30 40
130 140 150 160 170 180
pF1KB3 EMEQQQAYRPEMKTEMKQGAPTSFLPPEASQLKPDRQQFQSRKRPYEENRGRGYFEHRED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EMEQQQAYRPEMKTEMKQGAPTSFLPPEASQLKPDRQQFQSRKRPYEENRGRGYFEHRED
50 60 70 80 90 100
190 200 210 220 230 240
pF1KB3 RRGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RRGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARAS
110 120 130 140 150 160
250 260 270 280 290 300
pF1KB3 YGVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGEEPFSYGYGGTGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YGVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGEEPFSYGYGGTGK
170 180 190 200 210 220
310 320 330 340 350 360
pF1KB3 KSTNSRFENYGDKFAENDVIGCFADFECGNDVELSFTKNGKWMGIAFRIQKEALGGQALY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KSTNSRFENYGDKFAENDVIGCFADFECGNDVELSFTKNGKWMGIAFRIQKEALGGQALY
230 240 250 260 270 280
370 380 390 400 410 420
pF1KB3 PHVLVKNCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPKSKAECEILMMVGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PHVLVKNCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPKSKAECEILMMVGL
290 300 310 320 330 340
430 440 450 460 470 480
pF1KB3 PAAGKTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PAAGKTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLN
350 360 370 380 390 400
490 500 510 520 530 540
pF1KB3 RLIQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RLIQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEE
410 420 430 440 450 460
550 560 570 580 590 600
pF1KB3 GKDVPDHAVLEMKANFTLPDVGDFLDEVLFIELQREEADKLVRQYNEEGRKAGPPPEKRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GKDVPDHAVLEMKANFTLPDVGDFLDEVLFIELQREEADKLVRQYNEEGRKAGPPPEKRF
470 480 490 500 510 520
610 620 630 640 650 660
pF1KB3 DNRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFNRSGGGGYSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DNRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFNRSGGGGYSQ
530 540 550 560 570 580
670 680 690 700 710 720
pF1KB3 NRWGNNNRDNNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NRWGNNNRDNNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTY
590 600 610 620 630 640
730 740 750 760 770
pF1KB3 NKNSNIPGSSANTSTPTVSSYSPPQ----------PSYSQPPYNQGGYSQGYTAPPPPPP
::::::::::::::::::::::::: :::::::::::::::::::::::::
XP_005 NKNSNIPGSSANTSTPTVSSYSPPQSFGFFPSTFQPSYSQPPYNQGGYSQGYTAPPPPPP
650 660 670 680 690 700
780 790 800 810 820 830
pF1KB3 PPPAYNYGSYGGYNPAPYTPPPPPTAQTYPQPSYNQYQQYAQQWNQYYQNQGQWPPYYGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PPPAYNYGSYGGYNPAPYTPPPPPTAQTYPQPSYNQYQQYAQQWNQYYQNQGQWPPYYGN
710 720 730 740 750 760
840 850
pF1KB3 YDYGSYSGNTQGGTSTQ
:::::::::::::::::
XP_005 YDYGSYSGNTQGGTSTQ
770
>>XP_011524697 (OMIM: 605800) PREDICTED: heterogeneous n (766 aa)
initn: 4895 init1: 4602 opt: 4779 Z-score: 1759.3 bits: 336.4 E(85289): 3e-91
Smith-Waterman score: 5341; 98.7% identity (98.7% similar) in 766 aa overlap (101-856:1-766)
80 90 100 110 120 130
pF1KB3 ELEGTAQPPPPGLQPHAEPGGYSGPDGHYAMDNITRQNQFYDTQVIKQENESGYERRPLE
::::::::::::::::::::::::::::::
XP_011 MDNITRQNQFYDTQVIKQENESGYERRPLE
10 20 30
140 150 160 170 180 190
pF1KB3 MEQQQAYRPEMKTEMKQGAPTSFLPPEASQLKPDRQQFQSRKRPYEENRGRGYFEHREDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MEQQQAYRPEMKTEMKQGAPTSFLPPEASQLKPDRQQFQSRKRPYEENRGRGYFEHREDR
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB3 RGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASY
100 110 120 130 140 150
260 270 280 290 300 310
pF1KB3 GVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGEEPFSYGYGGTGKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGEEPFSYGYGGTGKK
160 170 180 190 200 210
320 330 340 350 360 370
pF1KB3 STNSRFENYGDKFAENDVIGCFADFECGNDVELSFTKNGKWMGIAFRIQKEALGGQALYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 STNSRFENYGDKFAENDVIGCFADFECGNDVELSFTKNGKWMGIAFRIQKEALGGQALYP
220 230 240 250 260 270
380 390 400 410 420 430
pF1KB3 HVLVKNCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPKSKAECEILMMVGLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HVLVKNCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPKSKAECEILMMVGLP
280 290 300 310 320 330
440 450 460 470 480 490
pF1KB3 AAGKTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AAGKTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNR
340 350 360 370 380 390
500 510 520 530 540 550
pF1KB3 LIQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LIQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEG
400 410 420 430 440 450
560 570 580 590 600 610
pF1KB3 KDVPDHAVLEMKANFTLPDVGDFLDEVLFIELQREEADKLVRQYNEEGRKAGPPPEKRFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KDVPDHAVLEMKANFTLPDVGDFLDEVLFIELQREEADKLVRQYNEEGRKAGPPPEKRFD
460 470 480 490 500 510
620 630 640 650 660 670
pF1KB3 NRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFNRSGGGGYSQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFNRSGGGGYSQN
520 530 540 550 560 570
680 690 700 710 720 730
pF1KB3 RWGNNNRDNNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTYN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RWGNNNRDNNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTYN
580 590 600 610 620 630
740 750 760 770 780
pF1KB3 KNSNIPGSSANTSTPTVSSYSPPQ----------PSYSQPPYNQGGYSQGYTAPPPPPPP
:::::::::::::::::::::::: ::::::::::::::::::::::::::
XP_011 KNSNIPGSSANTSTPTVSSYSPPQSFGFFPSTFQPSYSQPPYNQGGYSQGYTAPPPPPPP
640 650 660 670 680 690
790 800 810 820 830 840
pF1KB3 PPAYNYGSYGGYNPAPYTPPPPPTAQTYPQPSYNQYQQYAQQWNQYYQNQGQWPPYYGNY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PPAYNYGSYGGYNPAPYTPPPPPTAQTYPQPSYNQYQQYAQQWNQYYQNQGQWPPYYGNY
700 710 720 730 740 750
850
pF1KB3 DYGSYSGNTQGGTSTQ
::::::::::::::::
XP_011 DYGSYSGNTQGGTSTQ
760
>>XP_005258520 (OMIM: 605800) PREDICTED: heterogeneous n (766 aa)
initn: 4895 init1: 4602 opt: 4779 Z-score: 1759.3 bits: 336.4 E(85289): 3e-91
Smith-Waterman score: 5341; 98.7% identity (98.7% similar) in 766 aa overlap (101-856:1-766)
80 90 100 110 120 130
pF1KB3 ELEGTAQPPPPGLQPHAEPGGYSGPDGHYAMDNITRQNQFYDTQVIKQENESGYERRPLE
::::::::::::::::::::::::::::::
XP_005 MDNITRQNQFYDTQVIKQENESGYERRPLE
10 20 30
140 150 160 170 180 190
pF1KB3 MEQQQAYRPEMKTEMKQGAPTSFLPPEASQLKPDRQQFQSRKRPYEENRGRGYFEHREDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MEQQQAYRPEMKTEMKQGAPTSFLPPEASQLKPDRQQFQSRKRPYEENRGRGYFEHREDR
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB3 RGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASY
100 110 120 130 140 150
260 270 280 290 300 310
pF1KB3 GVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGEEPFSYGYGGTGKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGEEPFSYGYGGTGKK
160 170 180 190 200 210
320 330 340 350 360 370
pF1KB3 STNSRFENYGDKFAENDVIGCFADFECGNDVELSFTKNGKWMGIAFRIQKEALGGQALYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 STNSRFENYGDKFAENDVIGCFADFECGNDVELSFTKNGKWMGIAFRIQKEALGGQALYP
220 230 240 250 260 270
380 390 400 410 420 430
pF1KB3 HVLVKNCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPKSKAECEILMMVGLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HVLVKNCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPKSKAECEILMMVGLP
280 290 300 310 320 330
440 450 460 470 480 490
pF1KB3 AAGKTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AAGKTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNR
340 350 360 370 380 390
500 510 520 530 540 550
pF1KB3 LIQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LIQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEG
400 410 420 430 440 450
560 570 580 590 600 610
pF1KB3 KDVPDHAVLEMKANFTLPDVGDFLDEVLFIELQREEADKLVRQYNEEGRKAGPPPEKRFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KDVPDHAVLEMKANFTLPDVGDFLDEVLFIELQREEADKLVRQYNEEGRKAGPPPEKRFD
460 470 480 490 500 510
620 630 640 650 660 670
pF1KB3 NRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFNRSGGGGYSQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFNRSGGGGYSQN
520 530 540 550 560 570
680 690 700 710 720 730
pF1KB3 RWGNNNRDNNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTYN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RWGNNNRDNNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTYN
580 590 600 610 620 630
740 750 760 770 780
pF1KB3 KNSNIPGSSANTSTPTVSSYSPPQ----------PSYSQPPYNQGGYSQGYTAPPPPPPP
:::::::::::::::::::::::: ::::::::::::::::::::::::::
XP_005 KNSNIPGSSANTSTPTVSSYSPPQSFGFFPSTFQPSYSQPPYNQGGYSQGYTAPPPPPPP
640 650 660 670 680 690
790 800 810 820 830 840
pF1KB3 PPAYNYGSYGGYNPAPYTPPPPPTAQTYPQPSYNQYQQYAQQWNQYYQNQGQWPPYYGNY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PPAYNYGSYGGYNPAPYTPPPPPTAQTYPQPSYNQYQQYAQQWNQYYQNQGQWPPYYGNY
700 710 720 730 740 750
850
pF1KB3 DYGSYSGNTQGGTSTQ
::::::::::::::::
XP_005 DYGSYSGNTQGGTSTQ
760
856 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 12:23:06 2016 done: Thu Nov 3 12:23:09 2016
Total Scan time: 15.880 Total Display time: 0.310
Function used was FASTA [36.3.4 Apr, 2011]