Result of FASTA (ccds) for
pF1KB3248
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3248, 210 aa
1>>>pF1KB3248 210 - 210 aa - 210 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0117+/-0.000736; mu= 15.3028+/- 0.044
mean_var=63.2122+/-12.347, 0's: 0 Z-trim(108.5): 39 B-trim: 13 in 1/50
Lambda= 0.161315
statistics sampled from 10189 (10226) to 10189 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.71), E-opt: 0.2 (0.314), width: 16
Scan time: 1.980
The best scores are: opt bits E(32554)
CCDS47629.1 HGF gene_id:3082|Hs108|chr7 ( 210) 1475 351.4 2.4e-97
CCDS47627.1 HGF gene_id:3082|Hs108|chr7 ( 290) 1461 348.2 2.9e-96
CCDS5597.1 HGF gene_id:3082|Hs108|chr7 ( 728) 1461 348.5 6.2e-96
CCDS47628.1 HGF gene_id:3082|Hs108|chr7 ( 285) 1408 335.9 1.5e-92
CCDS47626.1 HGF gene_id:3082|Hs108|chr7 ( 723) 1408 336.2 3.2e-92
CCDS5279.1 PLG gene_id:5340|Hs108|chr6 ( 810) 450 113.2 4.5e-25
CCDS43523.1 LPA gene_id:4018|Hs108|chr6 (2040) 335 86.7 1.1e-16
CCDS31476.1 F2 gene_id:2147|Hs108|chr11 ( 622) 325 84.1 2.1e-16
CCDS6691.1 ROR2 gene_id:4920|Hs108|chr9 ( 943) 310 80.7 3.3e-15
CCDS33757.2 MST1 gene_id:4485|Hs108|chr3 ( 725) 303 79.0 8.2e-15
CCDS41344.1 ROR1 gene_id:4919|Hs108|chr1 ( 393) 294 76.7 2.1e-14
CCDS626.1 ROR1 gene_id:4919|Hs108|chr1 ( 937) 293 76.7 5.1e-14
CCDS55074.1 PLG gene_id:5340|Hs108|chr6 ( 136) 244 64.8 2.9e-11
>>CCDS47629.1 HGF gene_id:3082|Hs108|chr7 (210 aa)
initn: 1475 init1: 1475 opt: 1475 Z-score: 1861.3 bits: 351.4 E(32554): 2.4e-97
Smith-Waterman score: 1475; 100.0% identity (100.0% similar) in 210 aa overlap (1-210:1-210)
10 20 30 40 50 60
pF1KB3 MWVTKLLPALLLQHVLLHLLLLPIAIPYAEGQRKRRNTIHEFKKSAKTTLIKIDPALKIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MWVTKLLPALLLQHVLLHLLLLPIAIPYAEGQRKRRNTIHEFKKSAKTTLIKIDPALKIK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 TKKVNTADQCANRCTRNKGLPFTCKAFVFDKARKQCLWFPFNSMSSGVKKEFGHEFDLYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 TKKVNTADQCANRCTRNKGLPFTCKAFVFDKARKQCLWFPFNSMSSGVKKEFGHEFDLYE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 NKDYIRNCIIGKGRSYKGTVSITKSGIKCQPWSSMIPHEHSFLPSSYRGKDLQENYCRNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 NKDYIRNCIIGKGRSYKGTVSITKSGIKCQPWSSMIPHEHSFLPSSYRGKDLQENYCRNP
130 140 150 160 170 180
190 200 210
pF1KB3 RGEEGGPWCFTSNPEVRYEVCDIPQCSEGK
::::::::::::::::::::::::::::::
CCDS47 RGEEGGPWCFTSNPEVRYEVCDIPQCSEGK
190 200 210
>>CCDS47627.1 HGF gene_id:3082|Hs108|chr7 (290 aa)
initn: 1461 init1: 1461 opt: 1461 Z-score: 1841.6 bits: 348.2 E(32554): 2.9e-96
Smith-Waterman score: 1461; 100.0% identity (100.0% similar) in 208 aa overlap (1-208:1-208)
10 20 30 40 50 60
pF1KB3 MWVTKLLPALLLQHVLLHLLLLPIAIPYAEGQRKRRNTIHEFKKSAKTTLIKIDPALKIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MWVTKLLPALLLQHVLLHLLLLPIAIPYAEGQRKRRNTIHEFKKSAKTTLIKIDPALKIK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 TKKVNTADQCANRCTRNKGLPFTCKAFVFDKARKQCLWFPFNSMSSGVKKEFGHEFDLYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 TKKVNTADQCANRCTRNKGLPFTCKAFVFDKARKQCLWFPFNSMSSGVKKEFGHEFDLYE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 NKDYIRNCIIGKGRSYKGTVSITKSGIKCQPWSSMIPHEHSFLPSSYRGKDLQENYCRNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 NKDYIRNCIIGKGRSYKGTVSITKSGIKCQPWSSMIPHEHSFLPSSYRGKDLQENYCRNP
130 140 150 160 170 180
190 200 210
pF1KB3 RGEEGGPWCFTSNPEVRYEVCDIPQCSEGK
::::::::::::::::::::::::::::
CCDS47 RGEEGGPWCFTSNPEVRYEVCDIPQCSEVECMTCNGESYRGLMDHTESGKICQRWDHQTP
190 200 210 220 230 240
>--
initn: 287 init1: 186 opt: 286 Z-score: 363.8 bits: 74.8 E(32554): 6.1e-14
Smith-Waterman score: 286; 45.6% identity (70.9% similar) in 79 aa overlap (128-206:211-288)
100 110 120 130 140 150
pF1KB3 WFPFNSMSSGVKKEFGHEFDLYENKDYIRNCIIGKGRSYKGTVSITKSGIKCQPWSSMIP
:. .:.::.: .. :.:: :: :. . :
CCDS47 RGEEGGPWCFTSNPEVRYEVCDIPQCSEVECMTCNGESYRGLMDHTESGKICQRWDHQTP
190 200 210 220 230 240
160 170 180 190 200 210
pF1KB3 HEHSFLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDIPQCSEGK
:.:.::: : : ...:::::: :. :::.: .:..:.: : : :
CCDS47 HRHKFLPERYPDKGFDDNYCRNPDGQPR-PWCYTLDPHTRWEYCAIKTCET
250 260 270 280 290
>>CCDS5597.1 HGF gene_id:3082|Hs108|chr7 (728 aa)
initn: 1461 init1: 1461 opt: 1461 Z-score: 1835.8 bits: 348.5 E(32554): 6.2e-96
Smith-Waterman score: 1461; 100.0% identity (100.0% similar) in 208 aa overlap (1-208:1-208)
10 20 30 40 50 60
pF1KB3 MWVTKLLPALLLQHVLLHLLLLPIAIPYAEGQRKRRNTIHEFKKSAKTTLIKIDPALKIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MWVTKLLPALLLQHVLLHLLLLPIAIPYAEGQRKRRNTIHEFKKSAKTTLIKIDPALKIK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 TKKVNTADQCANRCTRNKGLPFTCKAFVFDKARKQCLWFPFNSMSSGVKKEFGHEFDLYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 TKKVNTADQCANRCTRNKGLPFTCKAFVFDKARKQCLWFPFNSMSSGVKKEFGHEFDLYE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 NKDYIRNCIIGKGRSYKGTVSITKSGIKCQPWSSMIPHEHSFLPSSYRGKDLQENYCRNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 NKDYIRNCIIGKGRSYKGTVSITKSGIKCQPWSSMIPHEHSFLPSSYRGKDLQENYCRNP
130 140 150 160 170 180
190 200 210
pF1KB3 RGEEGGPWCFTSNPEVRYEVCDIPQCSEGK
::::::::::::::::::::::::::::
CCDS55 RGEEGGPWCFTSNPEVRYEVCDIPQCSEVECMTCNGESYRGLMDHTESGKICQRWDHQTP
190 200 210 220 230 240
>--
initn: 491 init1: 245 opt: 334 Z-score: 418.3 bits: 86.2 E(32554): 5.6e-17
Smith-Waterman score: 334; 51.2% identity (77.9% similar) in 86 aa overlap (128-210:305-389)
100 110 120 130 140 150
pF1KB3 WFPFNSMSSGVKKEFGHEFDLYENKDYIRNCIIGKGRSYKGTVSITKSGIKCQPWSSMIP
:: :.:..:.:::. .:: :: :.:. :
CCDS55 DPHTRWEYCAIKTCADNTMNDTDVPLETTECIQGQGEGYRGTVNTIWNGIPCQRWDSQYP
280 290 300 310 320 330
160 170 180 190 200 210
pF1KB3 HEHSFLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCD-IPQC--SEGK
:::.. : ... :::.::::::: : :. :::::..:..: :. ::.: :.:.
CCDS55 HEHDMTPENFKCKDLRENYCRNPDGSES-PWCFTTDPNIRVGYCSQIPNCDMSHGQDCYR
340 350 360 370 380 390
CCDS55 GNGKNYMGNLSQTRSGLTCSMWDKNMEDLHRHIFWEPDASKLNENYCRNPDDDAHGPWCY
400 410 420 430 440 450
>--
initn: 290 init1: 186 opt: 289 Z-score: 361.7 bits: 75.7 E(32554): 7.9e-14
Smith-Waterman score: 289; 44.4% identity (71.6% similar) in 81 aa overlap (128-208:211-290)
100 110 120 130 140 150
pF1KB3 WFPFNSMSSGVKKEFGHEFDLYENKDYIRNCIIGKGRSYKGTVSITKSGIKCQPWSSMIP
:. .:.::.: .. :.:: :: :. . :
CCDS55 RGEEGGPWCFTSNPEVRYEVCDIPQCSEVECMTCNGESYRGLMDHTESGKICQRWDHQTP
190 200 210 220 230 240
160 170 180 190 200 210
pF1KB3 HEHSFLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDIPQCSEGK
:.:.::: : : ...:::::: :. :::.: .:..:.: : : :..
CCDS55 HRHKFLPERYPDKGFDDNYCRNPDGQPR-PWCYTLDPHTRWEYCAIKTCADNTMNDTDVP
250 260 270 280 290
CCDS55 LETTECIQGQGEGYRGTVNTIWNGIPCQRWDSQYPHEHDMTPENFKCKDLRENYCRNPDG
300 310 320 330 340 350
>>CCDS47628.1 HGF gene_id:3082|Hs108|chr7 (285 aa)
initn: 1360 init1: 1105 opt: 1408 Z-score: 1775.1 bits: 335.9 E(32554): 1.5e-92
Smith-Waterman score: 1408; 97.6% identity (97.6% similar) in 208 aa overlap (1-208:1-203)
10 20 30 40 50 60
pF1KB3 MWVTKLLPALLLQHVLLHLLLLPIAIPYAEGQRKRRNTIHEFKKSAKTTLIKIDPALKIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MWVTKLLPALLLQHVLLHLLLLPIAIPYAEGQRKRRNTIHEFKKSAKTTLIKIDPALKIK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 TKKVNTADQCANRCTRNKGLPFTCKAFVFDKARKQCLWFPFNSMSSGVKKEFGHEFDLYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 TKKVNTADQCANRCTRNKGLPFTCKAFVFDKARKQCLWFPFNSMSSGVKKEFGHEFDLYE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 NKDYIRNCIIGKGRSYKGTVSITKSGIKCQPWSSMIPHEHSFLPSSYRGKDLQENYCRNP
::::::::::::::::::::::::::::::::::::::::: ::::::::::::::
CCDS47 NKDYIRNCIIGKGRSYKGTVSITKSGIKCQPWSSMIPHEHS-----YRGKDLQENYCRNP
130 140 150 160 170
190 200 210
pF1KB3 RGEEGGPWCFTSNPEVRYEVCDIPQCSEGK
::::::::::::::::::::::::::::
CCDS47 RGEEGGPWCFTSNPEVRYEVCDIPQCSEVECMTCNGESYRGLMDHTESGKICQRWDHQTP
180 190 200 210 220 230
>--
initn: 287 init1: 186 opt: 286 Z-score: 363.9 bits: 74.8 E(32554): 6e-14
Smith-Waterman score: 286; 45.6% identity (70.9% similar) in 79 aa overlap (128-206:206-283)
100 110 120 130 140 150
pF1KB3 WFPFNSMSSGVKKEFGHEFDLYENKDYIRNCIIGKGRSYKGTVSITKSGIKCQPWSSMIP
:. .:.::.: .. :.:: :: :. . :
CCDS47 RGEEGGPWCFTSNPEVRYEVCDIPQCSEVECMTCNGESYRGLMDHTESGKICQRWDHQTP
180 190 200 210 220 230
160 170 180 190 200 210
pF1KB3 HEHSFLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDIPQCSEGK
:.:.::: : : ...:::::: :. :::.: .:..:.: : : :
CCDS47 HRHKFLPERYPDKGFDDNYCRNPDGQPR-PWCYTLDPHTRWEYCAIKTCET
240 250 260 270 280
>>CCDS47626.1 HGF gene_id:3082|Hs108|chr7 (723 aa)
initn: 1568 init1: 1105 opt: 1408 Z-score: 1769.2 bits: 336.2 E(32554): 3.2e-92
Smith-Waterman score: 1408; 97.6% identity (97.6% similar) in 208 aa overlap (1-208:1-203)
10 20 30 40 50 60
pF1KB3 MWVTKLLPALLLQHVLLHLLLLPIAIPYAEGQRKRRNTIHEFKKSAKTTLIKIDPALKIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MWVTKLLPALLLQHVLLHLLLLPIAIPYAEGQRKRRNTIHEFKKSAKTTLIKIDPALKIK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 TKKVNTADQCANRCTRNKGLPFTCKAFVFDKARKQCLWFPFNSMSSGVKKEFGHEFDLYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 TKKVNTADQCANRCTRNKGLPFTCKAFVFDKARKQCLWFPFNSMSSGVKKEFGHEFDLYE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 NKDYIRNCIIGKGRSYKGTVSITKSGIKCQPWSSMIPHEHSFLPSSYRGKDLQENYCRNP
::::::::::::::::::::::::::::::::::::::::: ::::::::::::::
CCDS47 NKDYIRNCIIGKGRSYKGTVSITKSGIKCQPWSSMIPHEHS-----YRGKDLQENYCRNP
130 140 150 160 170
190 200 210
pF1KB3 RGEEGGPWCFTSNPEVRYEVCDIPQCSEGK
::::::::::::::::::::::::::::
CCDS47 RGEEGGPWCFTSNPEVRYEVCDIPQCSEVECMTCNGESYRGLMDHTESGKICQRWDHQTP
180 190 200 210 220 230
>--
initn: 491 init1: 245 opt: 334 Z-score: 418.4 bits: 86.2 E(32554): 5.5e-17
Smith-Waterman score: 334; 51.2% identity (77.9% similar) in 86 aa overlap (128-210:300-384)
100 110 120 130 140 150
pF1KB3 WFPFNSMSSGVKKEFGHEFDLYENKDYIRNCIIGKGRSYKGTVSITKSGIKCQPWSSMIP
:: :.:..:.:::. .:: :: :.:. :
CCDS47 DPHTRWEYCAIKTCADNTMNDTDVPLETTECIQGQGEGYRGTVNTIWNGIPCQRWDSQYP
270 280 290 300 310 320
160 170 180 190 200 210
pF1KB3 HEHSFLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCD-IPQC--SEGK
:::.. : ... :::.::::::: : :. :::::..:..: :. ::.: :.:.
CCDS47 HEHDMTPENFKCKDLRENYCRNPDGSES-PWCFTTDPNIRVGYCSQIPNCDMSHGQDCYR
330 340 350 360 370 380
CCDS47 GNGKNYMGNLSQTRSGLTCSMWDKNMEDLHRHIFWEPDASKLNENYCRNPDDDAHGPWCY
390 400 410 420 430 440
>--
initn: 290 init1: 186 opt: 289 Z-score: 361.8 bits: 75.7 E(32554): 7.9e-14
Smith-Waterman score: 289; 44.4% identity (71.6% similar) in 81 aa overlap (128-208:206-285)
100 110 120 130 140 150
pF1KB3 WFPFNSMSSGVKKEFGHEFDLYENKDYIRNCIIGKGRSYKGTVSITKSGIKCQPWSSMIP
:. .:.::.: .. :.:: :: :. . :
CCDS47 RGEEGGPWCFTSNPEVRYEVCDIPQCSEVECMTCNGESYRGLMDHTESGKICQRWDHQTP
180 190 200 210 220 230
160 170 180 190 200 210
pF1KB3 HEHSFLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDIPQCSEGK
:.:.::: : : ...:::::: :. :::.: .:..:.: : : :..
CCDS47 HRHKFLPERYPDKGFDDNYCRNPDGQPR-PWCYTLDPHTRWEYCAIKTCADNTMNDTDVP
240 250 260 270 280 290
CCDS47 LETTECIQGQGEGYRGTVNTIWNGIPCQRWDSQYPHEHDMTPENFKCKDLRENYCRNPDG
300 310 320 330 340 350
>>CCDS5279.1 PLG gene_id:5340|Hs108|chr6 (810 aa)
initn: 773 init1: 306 opt: 450 Z-score: 563.6 bits: 113.2 E(32554): 4.5e-25
Smith-Waterman score: 450; 41.1% identity (70.2% similar) in 151 aa overlap (61-208:37-183)
40 50 60 70 80
pF1KB3 GQRKRRNTIHEFKKSAKTTLIKIDPALKIKTKK---VNTADQCANRCTRNKGLPFTCKAF
::: ... ..:: .: ... :::.::
CCDS52 VLLLLLFLKSGQGEPLDDYVNTQGASLFSVTKKQLGAGSIEECAAKCEEDE--EFTCRAF
10 20 30 40 50 60
90 100 110 120 130 140
pF1KB3 VFDKARKQCLWFPFNSMSSGVKKEFGHEFDLYENKDYIRNCIIGKGRSYKGTVSITKSGI
. . ..::. . : :: . . .. :.:.: :. .: :.:..:.::.: ::.::
CCDS52 QYHSKEQQCVIMAENRKSSIIIRM--RDVVLFEKKVYLSECKTGNGKNYRGTMSKTKNGI
70 80 90 100 110 120
150 160 170 180 190 200
pF1KB3 KCQPWSSMIPHEHSFLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDIPQCS
:: ::: ::. : :... .. :.::::::: .. ::::.:..:: ::. ::: .:
CCDS52 TCQKWSSTSPHRPRFSPATHPSEGLEENYCRNPDNDPQGPWCYTTDPEKRYDYCDILECE
130 140 150 160 170 180
210
pF1KB3 EGK
:
CCDS52 EECMHCSGENYDGKISKTMSGLECQAWDSQSPHAHGYIPSKFPNKNLKKNYCRNPDRELR
190 200 210 220 230 240
>--
initn: 534 init1: 199 opt: 337 Z-score: 421.4 bits: 86.9 E(32554): 3.7e-17
Smith-Waterman score: 337; 50.6% identity (73.5% similar) in 83 aa overlap (125-207:374-455)
100 110 120 130 140 150
pF1KB3 QCLWFPFNSMSSGVKKEFGHEFDLYENKDYIRNCIIGKGRSYKGTVSITKSGIKCQPWSS
...: : :.::.:: : : .: ::: :::
CCDS52 WEYCKIPSCDSSPVSTEQLAPTAPPELTPVVQDCYHGDGQSYRGTSSTTTTGKKCQSWSS
350 360 370 380 390 400
160 170 180 190 200 210
pF1KB3 MIPHEHSFLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDIPQCSEGK
: ::.:. : .: . : :::::: ...: :::::..: ::.: :.. .::
CCDS52 MTPHRHQKTPENYPNAGLTMNYCRNPDADKG-PWCFTTDPSVRWEYCNLKKCSGTEASVV
410 420 430 440 450 460
CCDS52 APPPVVLLPDVETPSEEDCMFGNGKGYRGKRATTVTGTPCQDWAAQEPHRHSIFTPETNP
470 480 490 500 510 520
>--
initn: 252 init1: 198 opt: 330 Z-score: 412.6 bits: 85.3 E(32554): 1.2e-16
Smith-Waterman score: 330; 46.3% identity (74.4% similar) in 82 aa overlap (127-207:480-561)
100 110 120 130 140 150
pF1KB3 LWFPFNSMSSGVKKEFGHEFDLYENKDYIRNCIIGKGRSYKGTVSITKSGIKCQPWSSMI
.:..:.:..:.: . : .: :: :...
CCDS52 NLKKCSGTEASVVAPPPVVLLPDVETPSEEDCMFGNGKGYRGKRATTVTGTPCQDWAAQE
450 460 470 480 490 500
160 170 180 190 200 210
pF1KB3 PHEHS-FLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDIPQCSEGK
::.:: : : . :..:::::: :. :::::.:.::. :. ::.:::.
CCDS52 PHRHSIFTPETNPRAGLEKNYCRNPDGDVGGPWCYTTNPRKLYDYCDVPQCAAPSFDCGK
510 520 530 540 550 560
CCDS52 PQVEPKKCPGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKSPR
570 580 590 600 610 620
>--
initn: 716 init1: 203 opt: 327 Z-score: 408.9 bits: 84.6 E(32554): 1.9e-16
Smith-Waterman score: 327; 48.8% identity (81.2% similar) in 80 aa overlap (128-207:185-263)
100 110 120 130 140 150
pF1KB3 WFPFNSMSSGVKKEFGHEFDLYENKDYIRNCIIGKGRSYKGTVSITKSGIKCQPWSSMIP
:. .:..: : .: : ::..:: :.:. :
CCDS52 PDNDPQGPWCYTTDPEKRYDYCDILECEEECMHCSGENYDGKISKTMSGLECQAWDSQSP
160 170 180 190 200 210
160 170 180 190 200 210
pF1KB3 HEHSFLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDIPQCSEGK
: :...::.. .:.:..:::::: .: :::::..:. :.:.::::.:.
CCDS52 HAHGYIPSKFPNKNLKKNYCRNP-DRELRPWCFTTDPNKRWELCDIPRCTTPPPSSGPTY
220 230 240 250 260 270
CCDS52 QCLKGTGENYRGNVAVTVSGHTCQHWSAQTPHTHNRTPENFPCKNLDENYCRNPDGKRAP
280 290 300 310 320 330
>--
initn: 276 init1: 158 opt: 316 Z-score: 395.0 bits: 82.0 E(32554): 1.1e-15
Smith-Waterman score: 316; 49.4% identity (75.9% similar) in 79 aa overlap (128-206:275-352)
100 110 120 130 140 150
pF1KB3 WFPFNSMSSGVKKEFGHEFDLYENKDYIRNCIIGKGRSYKGTVSITKSGIKCQPWSSMIP
:. : :..:.:.:..: :: :: ::.. :
CCDS52 CFTTDPNKRWELCDIPRCTTPPPSSGPTYQCLKGTGENYRGNVAVTVSGHTCQHWSAQTP
250 260 270 280 290 300
160 170 180 190 200 210
pF1KB3 HEHSFLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDIPQCSEGK
: :. : .. :.:.::::::: :... ::: :.: .::.: : ::.:
CCDS52 HTHNRTPENFPCKNLDENYCRNPDGKRA-PWCHTTNSQVRWEYCKIPSCDSSPVSTEQLA
310 320 330 340 350 360
CCDS52 PTAPPELTPVVQDCYHGDGQSYRGTSSTTTTGKKCQSWSSMTPHRHQKTPENYPNAGLTM
370 380 390 400 410 420
>>CCDS43523.1 LPA gene_id:4018|Hs108|chr6 (2040 aa)
initn: 381 init1: 208 opt: 335 Z-score: 413.1 bits: 86.7 E(32554): 1.1e-16
Smith-Waterman score: 335; 50.0% identity (70.0% similar) in 90 aa overlap (120-208:1494-1581)
90 100 110 120 130 140
pF1KB3 DKARKQCLWFPFNSMSSGVKKEFGHEFDLYENKDYIRNCIIGKGRSYKGTVSITKSGIKC
:.. ...: : ::::.: : : .: :
CCDS43 RCPVTESSVLTTPTVAPVPSTEAPSEQAPPEKSPVVQDCYHGDGRSYRGISSTTVTGRTC
1470 1480 1490 1500 1510 1520
150 160 170 180 190 200
pF1KB3 QPWSSMIPHEHSFLPSSYRGKDLQENYCRNP-RGEEGGPWCFTSNPEVRYEVCDIPQCSE
: ::::::: :. : .: . : ::::::: :.. :::.:..: ::.: :.. ::::
CCDS43 QSWSSMIPHWHQRTPENYPNAGLTENYCRNPDSGKQ--PWCYTTDPCVRWEYCNLTQCSE
1530 1540 1550 1560 1570 1580
210
pF1KB3 GK
CCDS43 TESGVLETPTVVPVPSMEAHSEAAPTEQTPVVRQCYHGNGQSYRGTFSTTVTGRTCQSWS
1590 1600 1610 1620 1630 1640
>--
initn: 362 init1: 189 opt: 331 Z-score: 408.1 bits: 85.8 E(32554): 2.1e-16
Smith-Waterman score: 331; 47.2% identity (69.7% similar) in 89 aa overlap (120-208:1608-1695)
90 100 110 120 130 140
pF1KB3 DKARKQCLWFPFNSMSSGVKKEFGHEFDLYENKDYIRNCIIGKGRSYKGTVSITKSGIKC
:. .:.: :.:.::.:: : : .: :
CCDS43 QCSETESGVLETPTVVPVPSMEAHSEAAPTEQTPVVRQCYHGNGQSYRGTFSTTVTGRTC
1580 1590 1600 1610 1620 1630
150 160 170 180 190 200
pF1KB3 QPWSSMIPHEHSFLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDIPQCSEG
: :::: ::.:. : .: . : :::::: .. : ::::: .: .:.: :.. .::.
CCDS43 QSWSSMTPHRHQRTPENYPNDGLTMNYCRNPDADTG-PWCFTMDPSIRWEYCNLTRCSDT
1640 1650 1660 1670 1680 1690
210
pF1KB3 K
CCDS43 EGTVVAPPTVIQVPSLGPPSEQDCMFGNGKGYRGKKATTVTGTPCQEWAAQEPHRHSTFI
1700 1710 1720 1730 1740 1750
>--
initn: 381 init1: 200 opt: 318 Z-score: 391.7 bits: 82.8 E(32554): 1.7e-15
Smith-Waterman score: 318; 45.1% identity (71.4% similar) in 91 aa overlap (120-210:932-1021)
90 100 110 120 130 140
pF1KB3 DKARKQCLWFPFNSMSSGVKKEFGHEFDLYENKDYIRNCIIGKGRSYKGTVSITKSGIKC
:.. ...: :.:.::.:: :: .: :
CCDS43 QCSDAEGTAVAPPTITPIPSLEAPSEQAPTEQRPGVQECYHGNGQSYQGTYFITVTGRTC
910 920 930 940 950 960
150 160 170 180 190 200
pF1KB3 QPWSSMIPHEHSFLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDIPQCSEG
: :::: :: :: :. : . : .:::::: ..:::.:..: ::.: :.. .::..
CCDS43 QAWSSMTPHSHSRTPAYYPNAGLIKNYCRNP-DPVAAPWCYTTDPSVRWEYCNLTRCSDA
970 980 990 1000 1010 1020
210
pF1KB3 K
.
CCDS43 EWTAFVPPNVILAPSLEAFFEQALTEETPGVQDCYYHYGQSYRGTYSTTVTGRTCQAWSS
1030 1040 1050 1060 1070 1080
>--
initn: 288 init1: 173 opt: 316 Z-score: 389.2 bits: 82.3 E(32554): 2.3e-15
Smith-Waterman score: 316; 43.4% identity (75.9% similar) in 83 aa overlap (126-207:1718-1800)
100 110 120 130 140 150
pF1KB3 CLWFPFNSMSSGVKKEFGHEFDLYENKDYIRNCIIGKGRSYKGTVSITKSGIKCQPWSSM
..:..:.:..:.: . : .: :: :...
CCDS43 CNLTRCSDTEGTVVAPPTVIQVPSLGPPSEQDCMFGNGKGYRGKKATTVTGTPCQEWAAQ
1690 1700 1710 1720 1730 1740
160 170 180 190 200 210
pF1KB3 IPHEHS-FLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDIPQCSEGK
::.:: :.:.. . :..:::::: :. .::::.: ::. .. :::: :.
CCDS43 EPHRHSTFIPGTNKWAGLEKNYCRNPDGDINGPWCYTMNPRKLFDYCDIPLCASSSFDCG
1750 1760 1770 1780 1790 1800
CCDS43 KPQVEPKKCPGSIVGGCVAHPHSWPWQVSLRTRFGKHFCGGTLISPEWVLTAAHCLKKSS
1810 1820 1830 1840 1850 1860
>--
initn: 612 init1: 195 opt: 314 Z-score: 386.7 bits: 81.8 E(32554): 3.2e-15
Smith-Waterman score: 314; 47.2% identity (66.3% similar) in 89 aa overlap (118-206:1044-1131)
90 100 110 120 130 140
pF1KB3 VFDKARKQCLWFPFNSMSSGVKKEFGHEFDLYENKDYIRNCIIGKGRSYKGTVSITKSGI
: :. ...: :.::.:: : : .:
CCDS43 LTRCSDAEWTAFVPPNVILAPSLEAFFEQALTEETPGVQDCYYHYGQSYRGTYSTTVTGR
1020 1030 1040 1050 1060 1070
150 160 170 180 190 200
pF1KB3 KCQPWSSMIPHEHSFLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDIPQCS
:: :::: ::.:: : .: . : .:::::: .: :::.: .: ::.: :.. ::
CCDS43 TCQAWSSMTPHQHSRTPENYPNAGLTRNYCRNPDAEIR-PWCYTMDPSVRWEYCNLTQCL
1080 1090 1100 1110 1120 1130
210
pF1KB3 EGK
CCDS43 VTESSVLATLTVVPDPSTEASSEEAPTEQSPGVQDCYHGDGQSYRGSFSTTVTGRTCQSW
1140 1150 1160 1170 1180 1190
>--
initn: 591 init1: 224 opt: 310 Z-score: 381.7 bits: 80.9 E(32554): 6.1e-15
Smith-Waterman score: 310; 47.1% identity (67.8% similar) in 87 aa overlap (120-206:1380-1465)
90 100 110 120 130 140
pF1KB3 DKARKQCLWFPFNSMSSGVKKEFGHEFDLYENKDYIRNCIIGKGRSYKGTVSITKSGIKC
::. ...: : :.::.::.: : .: :
CCDS43 QCPVMESTLLTTPTVVPVPSTELPSEEAPTENSTGVQDCYRGDGQSYRGTLSTTITGRTC
1350 1360 1370 1380 1390 1400
150 160 170 180 190 200
pF1KB3 QPWSSMIPHEHSFLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDIPQCSEG
: :::: :: : .: : . : .:::::: .: :::.: .: ::.: :.. .:
CCDS43 QSWSSMTPHWHRRIPLYYPNAGLTRNYCRNPDAEIR-PWCYTMDPSVRWEYCNLTRCPVT
1410 1420 1430 1440 1450 1460
210
pF1KB3 K
CCDS43 ESSVLTTPTVAPVPSTEAPSEQAPPEKSPVVQDCYHGDGRSYRGISSTTVTGRTCQSWSS
1470 1480 1490 1500 1510 1520
>--
initn: 296 init1: 198 opt: 306 Z-score: 376.6 bits: 80.0 E(32554): 1.2e-14
Smith-Waterman score: 306; 45.1% identity (68.1% similar) in 91 aa overlap (120-210:818-907)
90 100 110 120 130 140
pF1KB3 DKARKQCLWFPFNSMSSGVKKEFGHEFDLYENKDYIRNCIIGKGRSYKGTVSITKSGIKC
:.. ...: :.:.::.:: : : .: :
CCDS43 QCSDAEGTAVAPPTVTPVPSLEAPSEQAPTEQRPGVQECYHGNGQSYRGTYSTTVTGRTC
790 800 810 820 830 840
150 160 170 180 190 200
pF1KB3 QPWSSMIPHEHSFLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDIPQCSEG
: :::: :: :: : : . : :::::: ..:.:.: .: ::.: :.. :::..
CCDS43 QAWSSMTPHSHSRTPEYYPNAGLIMNYCRNP-DPVAAPYCYTRDPSVRWEYCNLTQCSDA
850 860 870 880 890 900
210
pF1KB3 K
.
CCDS43 EGTAVAPPTITPIPSLEAPSEQAPTEQRPGVQECYHGNGQSYQGTYFITVTGRTCQAWSS
910 920 930 940 950 960
>--
initn: 247 init1: 198 opt: 304 Z-score: 374.1 bits: 79.5 E(32554): 1.6e-14
Smith-Waterman score: 304; 45.1% identity (68.1% similar) in 91 aa overlap (120-210:704-793)
90 100 110 120 130 140
pF1KB3 DKARKQCLWFPFNSMSSGVKKEFGHEFDLYENKDYIRNCIIGKGRSYKGTVSITKSGIKC
:.. ...: :.:.::.:: : : .: :
CCDS43 QCSDAEGTAVAPPTVTPVPSLEAPSEQAPTEQRPGVQECYHGNGQSYRGTYSTTVTGRTC
680 690 700 710 720 730
150 160 170 180 190 200
pF1KB3 QPWSSMIPHEHSFLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDIPQCSEG
: :::: :: :: : : . : :::::: ..:.:.: .: ::.: :.. :::..
CCDS43 QAWSSMTPHSHSRTPEYYPNAGLIMNYCRNP-DAVAAPYCYTRDPGVRWEYCNLTQCSDA
740 750 760 770 780 790
210
pF1KB3 K
.
CCDS43 EGTAVAPPTVTPVPSLEAPSEQAPTEQRPGVQECYHGNGQSYRGTYSTTVTGRTCQAWSS
800 810 820 830 840 850
>--
initn: 345 init1: 198 opt: 304 Z-score: 374.1 bits: 79.5 E(32554): 1.6e-14
Smith-Waterman score: 304; 45.1% identity (68.1% similar) in 91 aa overlap (120-210:590-679)
90 100 110 120 130 140
pF1KB3 DKARKQCLWFPFNSMSSGVKKEFGHEFDLYENKDYIRNCIIGKGRSYKGTVSITKSGIKC
:.. ...: :.:.::.:: : : .: :
CCDS43 QCSDAEGTAVAPPTVTPVPSLEAPSEQAPTEQRPGVQECYHGNGQSYRGTYSTTVTGRTC
560 570 580 590 600 610
150 160 170 180 190 200
pF1KB3 QPWSSMIPHEHSFLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDIPQCSEG
: :::: :: :: : : . : :::::: ..:.:.: .: ::.: :.. :::..
CCDS43 QAWSSMTPHSHSRTPEYYPNAGLIMNYCRNP-DAVAAPYCYTRDPGVRWEYCNLTQCSDA
620 630 640 650 660 670
210
pF1KB3 K
.
CCDS43 EGTAVAPPTVTPVPSLEAPSEQAPTEQRPGVQECYHGNGQSYRGTYSTTVTGRTCQAWSS
680 690 700 710 720 730
>--
initn: 394 init1: 198 opt: 304 Z-score: 374.1 bits: 79.5 E(32554): 1.6e-14
Smith-Waterman score: 304; 45.1% identity (68.1% similar) in 91 aa overlap (120-210:476-565)
90 100 110 120 130 140
pF1KB3 DKARKQCLWFPFNSMSSGVKKEFGHEFDLYENKDYIRNCIIGKGRSYKGTVSITKSGIKC
:.. ...: :.:.::.:: : : .: :
CCDS43 QCSDAEGTAVAPPTVTPVPSLEAPSEQAPTEQRPGVQECYHGNGQSYRGTYSTTVTGRTC
450 460 470 480 490 500
150 160 170 180 190 200
pF1KB3 QPWSSMIPHEHSFLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDIPQCSEG
: :::: :: :: : : . : :::::: ..:.:.: .: ::.: :.. :::..
CCDS43 QAWSSMTPHSHSRTPEYYPNAGLIMNYCRNP-DAVAAPYCYTRDPGVRWEYCNLTQCSDA
510 520 530 540 550 560
210
pF1KB3 K
.
CCDS43 EGTAVAPPTVTPVPSLEAPSEQAPTEQRPGVQECYHGNGQSYRGTYSTTVTGRTCQAWSS
570 580 590 600 610 620
>--
initn: 443 init1: 198 opt: 304 Z-score: 374.1 bits: 79.5 E(32554): 1.6e-14
Smith-Waterman score: 304; 45.1% identity (68.1% similar) in 91 aa overlap (120-210:362-451)
90 100 110 120 130 140
pF1KB3 DKARKQCLWFPFNSMSSGVKKEFGHEFDLYENKDYIRNCIIGKGRSYKGTVSITKSGIKC
:.. ...: :.:.::.:: : : .: :
CCDS43 QCSDAEGTAVAPPTVTPVPSLEAPSEQAPTEQRPGVQECYHGNGQSYRGTYSTTVTGRTC
340 350 360 370 380 390
150 160 170 180 190 200
pF1KB3 QPWSSMIPHEHSFLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDIPQCSEG
: :::: :: :: : : . : :::::: ..:.:.: .: ::.: :.. :::..
CCDS43 QAWSSMTPHSHSRTPEYYPNAGLIMNYCRNP-DAVAAPYCYTRDPGVRWEYCNLTQCSDA
400 410 420 430 440 450
210
pF1KB3 K
.
CCDS43 EGTAVAPPTVTPVPSLEAPSEQAPTEQRPGVQECYHGNGQSYRGTYSTTVTGRTCQAWSS
460 470 480 490 500 510
>--
initn: 296 init1: 198 opt: 304 Z-score: 374.1 bits: 79.5 E(32554): 1.6e-14
Smith-Waterman score: 304; 45.1% identity (68.1% similar) in 91 aa overlap (120-210:248-337)
90 100 110 120 130 140
pF1KB3 DKARKQCLWFPFNSMSSGVKKEFGHEFDLYENKDYIRNCIIGKGRSYKGTVSITKSGIKC
:.. ...: :.:.::.:: : : .: :
CCDS43 QCSDAEGTAVAPPTVTPVPSLEAPSEQAPTEQRPGVQECYHGNGQSYRGTYSTTVTGRTC
220 230 240 250 260 270
150 160 170 180 190 200
pF1KB3 QPWSSMIPHEHSFLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDIPQCSEG
: :::: :: :: : : . : :::::: ..:.:.: .: ::.: :.. :::..
CCDS43 QAWSSMTPHSHSRTPEYYPNAGLIMNYCRNP-DAVAAPYCYTRDPGVRWEYCNLTQCSDA
280 290 300 310 320 330
210
pF1KB3 K
.
CCDS43 EGTAVAPPTVTPVPSLEAPSEQAPTEQRPGVQECYHGNGQSYRGTYSTTVTGRTCQAWSS
340 350 360 370 380 390
>--
initn: 310 init1: 198 opt: 304 Z-score: 374.1 bits: 79.5 E(32554): 1.6e-14
Smith-Waterman score: 304; 45.1% identity (68.1% similar) in 91 aa overlap (120-210:134-223)
90 100 110 120 130 140
pF1KB3 DKARKQCLWFPFNSMSSGVKKEFGHEFDLYENKDYIRNCIIGKGRSYKGTVSITKSGIKC
:.. ...: :.:.::.:: : : .: :
CCDS43 QCSDAEGTAVAPPTVTPVPSLEAPSEQAPTEQRPGVQECYHGNGQSYRGTYSTTVTGRTC
110 120 130 140 150 160
150 160 170 180 190 200
pF1KB3 QPWSSMIPHEHSFLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDIPQCSEG
: :::: :: :: : : . : :::::: ..:.:.: .: ::.: :.. :::..
CCDS43 QAWSSMTPHSHSRTPEYYPNAGLIMNYCRNP-DAVAAPYCYTRDPGVRWEYCNLTQCSDA
170 180 190 200 210 220
210
pF1KB3 K
.
CCDS43 EGTAVAPPTVTPVPSLEAPSEQAPTEQRPGVQECYHGNGQSYRGTYSTTVTGRTCQAWSS
230 240 250 260 270 280
>--
initn: 431 init1: 167 opt: 296 Z-score: 364.0 bits: 77.6 E(32554): 5.9e-14
Smith-Waterman score: 296; 44.8% identity (67.8% similar) in 87 aa overlap (120-206:1160-1245)
90 100 110 120 130 140
pF1KB3 DKARKQCLWFPFNSMSSGVKKEFGHEFDLYENKDYIRNCIIGKGRSYKGTVSITKSGIKC
:.. ...: : :.::.:. : : .: :
CCDS43 QCLVTESSVLATLTVVPDPSTEASSEEAPTEQSPGVQDCYHGDGQSYRGSFSTTVTGRTC
1130 1140 1150 1160 1170 1180
150 160 170 180 190 200
pF1KB3 QPWSSMIPHEHSFLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDIPQCSEG
: :::: :: :. : . : .:::::: .: . :::.: .:.::.: :.. ::
CCDS43 QSWSSMTPHWHQRTTEYYPNGGLTRNYCRNPDAEIS-PWCYTMDPNVRWEYCNLTQCPVT
1190 1200 1210 1220 1230 1240
210
pF1KB3 K
CCDS43 ESSVLATSTAVSEQAPTEQSPTVQDCYHGDGQSYRGSFSTTVTGRTCQSWSSMTPHWHQR
1250 1260 1270 1280 1290 1300
>--
initn: 267 init1: 188 opt: 295 Z-score: 362.8 bits: 77.4 E(32554): 6.9e-14
Smith-Waterman score: 295; 42.9% identity (68.1% similar) in 91 aa overlap (120-210:20-109)
90 100 110 120 130 140
pF1KB3 DKARKQCLWFPFNSMSSGVKKEFGHEFDLYENKDYIRNCIIGKGRSYKGTVSITKSGIKC
:.. ...: : :.::.:: : : .: :
CCDS43 MEHKEVVLLLLLFLKSAAPEQSHVVQDCYHGDGQSYRGTYSTTVTGRTC
10 20 30 40
150 160 170 180 190 200
pF1KB3 QPWSSMIPHEHSFLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDIPQCSEG
: :::: ::.:. .: . : :::::: ..:.:.: .: ::.: :.. :::..
CCDS43 QAWSSMTPHQHNRTTENYPNAGLIMNYCRNP-DAVAAPYCYTRDPGVRWEYCNLTQCSDA
50 60 70 80 90 100
210
pF1KB3 K
.
CCDS43 EGTAVAPPTVTPVPSLEAPSEQAPTEQRPGVQECYHGNGQSYRGTYSTTVTGRTCQAWSS
110 120 130 140 150 160
>--
initn: 278 init1: 167 opt: 293 Z-score: 360.3 bits: 77.0 E(32554): 9.5e-14
Smith-Waterman score: 293; 44.8% identity (65.5% similar) in 87 aa overlap (120-206:1266-1351)
90 100 110 120 130 140
pF1KB3 DKARKQCLWFPFNSMSSGVKKEFGHEFDLYENKDYIRNCIIGKGRSYKGTVSITKSGIKC
:.. ...: : :.::.:. : : .: :
CCDS43 RWEYCNLTQCPVTESSVLATSTAVSEQAPTEQSPTVQDCYHGDGQSYRGSFSTTVTGRTC
1240 1250 1260 1270 1280 1290
150 160 170 180 190 200
pF1KB3 QPWSSMIPHEHSFLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDIPQCSEG
: :::: :: :. : . : .:::::: .: :::.: .: ::.: :.. ::
CCDS43 QSWSSMTPHWHQRTTEYYPNGGLTRNYCRNPDAEIR-PWCYTMDPSVRWEYCNLTQCPVM
1300 1310 1320 1330 1340 1350
210
pF1KB3 K
CCDS43 ESTLLTTPTVVPVPSTELPSEEAPTENSTGVQDCYRGDGQSYRGTLSTTITGRTCQSWSS
1360 1370 1380 1390 1400 1410
>>CCDS31476.1 F2 gene_id:2147|Hs108|chr11 (622 aa)
initn: 444 init1: 325 opt: 325 Z-score: 408.0 bits: 84.1 E(32554): 2.1e-16
Smith-Waterman score: 325; 47.6% identity (71.4% similar) in 84 aa overlap (127-210:107-190)
100 110 120 130 140 150
pF1KB3 LWFPFNSMSSGVKKEFGHEFDLYENKDYIRNCIIGKGRSYKGTVSITKSGIKCQPWSSMI
:: : : .:.: :.::.:::.:: : :
CCDS31 STATDVFWAKYTACETARTPRDKLAACLEGNCAEGLGTNYRGHVNITRSGIECQLWRSRY
80 90 100 110 120 130
160 170 180 190 200 210
pF1KB3 PHEHSFLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDIPQCSEGK
::. . ... : :::::.:::: . ::::.:..: :: . :.:: :.. .
CCDS31 PHKPEINSTTHPGADLQENFCRNPDSSTTGPWCYTTDPTVRRQECSIPVCGQDQVTVAMT
140 150 160 170 180 190
CCDS31 PRSEGSSVNLSPPLEQCVPDRGQQYQGRLAVTTHGLPCLAWASAQAKALSKHQDFNSAVQ
200 210 220 230 240 250
>>CCDS6691.1 ROR2 gene_id:4920|Hs108|chr9 (943 aa)
initn: 310 init1: 310 opt: 310 Z-score: 386.5 bits: 80.7 E(32554): 3.3e-15
Smith-Waterman score: 310; 48.8% identity (72.5% similar) in 80 aa overlap (128-207:316-395)
100 110 120 130 140 150
pF1KB3 WFPFNSMSSGVKKEFGHEFDLYENKDYIRNCIIGKGRSYKGTVSITKSGIKCQPWSSMIP
: :.: .:.::.: :::: .::::. . :
CCDS66 CEALPMPESPDAANCMRIGIPAERLGRYHQCYNGSGMDYRGTASTTKSGHQCQPWALQHP
290 300 310 320 330 340
160 170 180 190 200 210
pF1KB3 HEHSFLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDIPQCSEGK
: : . ... . ::::: :. ::::::.: .::.:.::.:.::
CCDS66 HSHHLSSTDFPELGGGHAYCRNPGGQMEGPWCFTQNKNVRMELCDVPSCSPRDSSKMGIL
350 360 370 380 390 400
CCDS66 YILVPSIAIPLVIACLFFLVCMCRNKQKASASTPQRRQLMASPSQDMEMPLINQHKQAKL
410 420 430 440 450 460
>>CCDS33757.2 MST1 gene_id:4485|Hs108|chr3 (725 aa)
initn: 772 init1: 259 opt: 303 Z-score: 379.4 bits: 79.0 E(32554): 8.2e-15
Smith-Waterman score: 466; 34.4% identity (64.6% similar) in 209 aa overlap (2-208:5-202)
10 20 30 40 50
pF1KB3 MWVTKLLPALLLQHVLLHLLLLP-IAIPYAEGQRKRRNTIHEFKKSAKTTLIK-IDP
::: :: . . : ::: ...: :::. : .. .. . :.. . :
CCDS33 MGLWWVTVQPPARRMGWLPLLLLLTQCLGVP---GQRSPLNDFQVLRGTELQHLLHAVVP
10 20 30 40 50
60 70 80 90 100 110
pF1KB3 ALKIKTKKVNTADQCANRCTRNKGLPFTCKAFVFDKARKQCLWFPFNSMSSGVKKEFGHE
. . : :..::.:: : . :.:: .. . . : .:... : .. . . .
CCDS33 G--PWQEDVADAEECAGRC----GPLMDCRAFHYNVSSHGCQLLPWTQHSPHTRLRRSGR
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB3 FDLYENKDYIRNCIIGKGRSYKGTVSITKSGIKCQPWSSMIPHEHSFLPSSYRGKDLQEN
::...:::.:.::...: .:.::.. : .:. :: :: .:..:.. :. : :.::
CCDS33 CDLFQKKDYVRTCIMNNGVGYRGTMATTVGGLPCQAWSHKFPNDHKYTPTLRNG--LEEN
120 130 140 150 160
180 190 200 210
pF1KB3 YCRNPRGEEGGPWCFTSNPEVRYEVCDIPQCSEGK
.:::: :. :::::.:..: ::.. : : .: :
CCDS33 FCRNPDGDPGGPWCYTTDPAVRFQSCGIKSCREAACVWCNGEEYRGAVDRTESGRECQRW
170 180 190 200 210 220
CCDS33 DLQHPHQHPFEPGKFLDQGLDDNYCRNPDGSERPWCYTTDPQIEREFCDLPRCGSEAQPR
230 240 250 260 270 280
>--
initn: 772 init1: 259 opt: 303 Z-score: 379.4 bits: 79.0 E(32554): 8.2e-15
Smith-Waterman score: 312; 48.2% identity (74.7% similar) in 83 aa overlap (127-208:296-377)
100 110 120 130 140 150
pF1KB3 LWFPFNSMSSGVKKEFGHEFDLYENKDYIRNCIIGKGRSYKGTVSITKSGIKCQPWSSMI
.:. :::..:.::.. : .:. :: :...:
CCDS33 YTTDPQIEREFCDLPRCGSEAQPRQEATTVSCFRGKGEGYRGTANTTTAGVPCQRWDAQI
270 280 290 300 310 320
160 170 180 190 200 210
pF1KB3 PHEHSFLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVC-DIPQCSEGK
::.: : : .: :::.::.:::: : :. ::::: : .: : .: .:..
CCDS33 PHQHRFTPEKYACKDLRENFCRNPDGSEA-PWCFTLRPGMRAAFCYQIRRCTDDVRPQDC
330 340 350 360 370 380
CCDS33 YHGAGEQYRGTVSKTRKGVQCQRWSAETPHKPQFTFTSEPHAQLEENFCRNPDGDSHGPW
390 400 410 420 430 440
>--
initn: 289 init1: 185 opt: 300 Z-score: 375.6 bits: 78.3 E(32554): 1.3e-14
Smith-Waterman score: 300; 44.0% identity (76.2% similar) in 84 aa overlap (128-210:205-287)
100 110 120 130 140 150
pF1KB3 WFPFNSMSSGVKKEFGHEFDLYENKDYIRNCIIGKGRSYKGTVSITKSGIKCQPWSSMIP
:. .:. :.:.:. :.:: .:: :. . :
CCDS33 DGDPGGPWCYTTDPAVRFQSCGIKSCREAACVWCNGEEYRGAVDRTESGRECQRWDLQHP
180 190 200 210 220 230
160 170 180 190 200 210
pF1KB3 HEHSFLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDIPQC-SEGK
:.: : :... . :..:::::: : : :::.:..:... : ::.:.: ::..
CCDS33 HQHPFEPGKFLDQGLDDNYCRNPDGSER-PWCYTTDPQIEREFCDLPRCGSEAQPRQEAT
240 250 260 270 280 290
CCDS33 TVSCFRGKGEGYRGTANTTTAGVPCQRWDAQIPHQHRFTPEKYACKDLRENFCRNPDGSE
300 310 320 330 340 350
>--
initn: 297 init1: 259 opt: 296 Z-score: 370.6 bits: 77.4 E(32554): 2.5e-14
Smith-Waterman score: 296; 40.0% identity (72.9% similar) in 85 aa overlap (126-210:382-466)
100 110 120 130 140 150
pF1KB3 CLWFPFNSMSSGVKKEFGHEFDLYENKDYIRNCIIGKGRSYKGTVSITKSGIKCQPWSSM
..: : :..:.:::: :..:..:: ::.
CCDS33 SEAPWCFTLRPGMRAAFCYQIRRCTDDVRPQDCYHGAGEQYRGTVSKTRKGVQCQRWSAE
360 370 380 390 400 410
160 170 180 190 200 210
pF1KB3 IPHEHSFLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDIPQCSEGK
::. .: .: .:.::.:::: :. ::::.: .:.. .. : . .:.. .
CCDS33 TPHKPQFTFTSEPHAQLEENFCRNPDGDSHGPWCYTMDPRTPFDYCALRRCADDQPPSIL
420 430 440 450 460 470
CCDS33 DPPDQVQFEKCGKRVDRLDQRRSKLRVVGGHPGNSPWTVSLRNRQGQHFCGGSLVKEQWI
480 490 500 510 520 530
210 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 12:39:13 2016 done: Thu Nov 3 12:39:13 2016
Total Scan time: 1.980 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]