(Circular) (Six-base) MAPSORT of: pF1KB3283.seq Check: 9376 from: 1 to: 6680 pF1KB3283 6680 bp With 182 enzymes: SgfI * June 20, 2008 10:22 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 598 824 1787 3608 598 Size: 226 963 1821 3670 Fragments arranged by size: 3670 1821 963 226 AccI GT'mk_AC Cuts at: 668 3718 668 Size: 3050 3630 Acc65I G'GTAC_C Cuts at: 1016 3696 1016 Size: 2680 4000 AclI AA'CG_TT Cuts at: 6520 6520 Size: 6680 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 151 687 1264 1537 4505 4937 5684 5952 151 Size: 536 577 273 2968 432 747 268 879 Fragments arranged by size: 2968 879 747 577 536 432 273 268 AflIII A'CryG_T Cuts at: 3272 4032 5136 6113 3272 Size: 760 1104 977 3839 Fragments arranged by size: 3839 1104 977 760 AgeI A'CCGG_T Cuts at: 5068 5068 Size: 6680 AleI CACnn'nnGTG Cuts at: 1044 1044 Size: 6680 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 2152 3175 2152 Size: 1023 5657 AloI GAACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 2516 2548 2516 Size: 32 6648 AlwNI CAG_nnn'CTG Cuts at: 925 1217 1420 1999 2808 3495 3985 5552 925 Size: 292 203 579 809 687 490 1567 2053 Fragments arranged by size: 2053 1567 809 687 579 490 292 203 ApaI G_GGCC'C Cuts at: 313 349 1338 1848 2208 2363 313 Size: 36 989 510 360 155 4630 Fragments arranged by size: 4630 989 510 360 155 36 ApaLI G'TGCA_C Cuts at: 2049 5450 2049 Size: 3401 3279 ApoI r'AATT_y Cuts at: 3684 6033 6289 3684 Size: 2349 256 4075 Fragments arranged by size: 4075 2349 256 AseI AT'TA_AT Cuts at: 20 20 Size: 6680 AsiSI GCG_AT'CGC Cuts at: 104 104 Size: 6680 AvaI C'yCGr_G Cuts at: 203 1357 1488 1545 2195 2209 2571 3700 203 Size: 1154 131 57 650 14 362 1129 3183 Fragments arranged by size: 3183 1154 1129 650 362 131 57 14 BamHI G'GATC_C Cuts at: 735 2735 3705 735 Size: 2000 970 3710 Fragments arranged by size: 3710 2000 970 BanI G'GyrC_C Cuts at: 136 582 812 1016 1046 1159 3188 3340 3355 Size: 446 230 204 30 113 2029 152 15 Cuts at: 3355 3395 3462 3696 4110 4358 4393 136 Size: 40 67 234 414 248 35 2423 Fragments arranged by size: 2423 2029 446 414 248 234 230 204 152 113 67 40 35 30 15 BanII G_rGCy'C Cuts at: 191 313 349 573 767 1338 1848 2208 2363 Size: 122 36 224 194 571 510 360 155 Cuts at: 2363 2660 2815 2908 3065 3094 3236 3477 3694 Size: 297 155 93 157 29 142 241 217 Cuts at: 3694 4724 191 Size: 1030 2147 Fragments arranged by size: 2147 1030 571 510 360 297 241 224 217 194 157 155 155 142 122 93 36 29 BbeI G_GCGC'C Cuts at: 3344 3359 3399 4114 4362 3344 Size: 15 40 715 248 5662 Fragments arranged by size: 5662 715 248 40 15 BbsI GAAGACnn'nnnn_ Cuts at: 160 1255 1703 160 Size: 1095 448 5137 Fragments arranged by size: 5137 1095 448 BcgI CGAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 1749 1783 1749 Size: 34 6646 BciVI GTATCCnnnnn_n' Cuts at: 4578 5339 6680 4578 Size: 761 1341 4578 Fragments arranged by size: 4578 1341 761 BclI T'GATC_A Cuts at: 4200 4200 Size: 6680 BglI GCCn_nnn'nGGC Cuts at: 832 1145 3186 832 Size: 313 2041 4326 Fragments arranged by size: 4326 2041 313 BglII A'GATC_T Cuts at: 4195 6232 4195 Size: 2037 4643 BlpI GC'TnA_GC Cuts at: 1756 2125 2809 3557 3792 1756 Size: 369 684 748 235 4644 Fragments arranged by size: 4644 748 684 369 235 Bme1580I G_kGCm'C Cuts at: 139 313 349 454 587 695 815 932 1051 Size: 174 36 105 133 108 120 117 119 Cuts at: 1051 1338 1611 1637 1848 2053 2069 2174 2208 Size: 287 273 26 211 205 16 105 34 Cuts at: 2208 2363 2787 3198 3285 3328 4305 4398 5454 Size: 155 424 411 87 43 977 93 1056 Cuts at: 5454 139 Size: 1365 Fragments arranged by size: 1365 1056 977 424 411 287 273 211 205 174 155 133 120 119 117 108 105 105 93 87 43 36 34 26 16 BmrI ACTGGGnnnn_n' Cuts at: 2009 2088 2465 3630 3892 3973 4308 6452 2009 Size: 79 377 1165 262 81 335 2144 2237 Fragments arranged by size: 2237 2144 1165 377 335 262 81 79 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 1685 2886 5047 1685 Size: 1201 2161 3318 Fragments arranged by size: 3318 2161 1201 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 568 583 1171 1522 1640 1698 2088 2591 2724 Size: 15 588 351 118 58 390 503 133 Cuts at: 2724 3079 3298 3367 3421 568 Size: 355 219 69 54 3827 Fragments arranged by size: 3827 588 503 390 355 351 219 133 118 69 58 54 15 Bpu10I CC'TnA_GC Cuts at: 268 479 708 1058 2879 268 Size: 211 229 350 1821 4069 Fragments arranged by size: 4069 1821 350 229 211 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 484 3856 4735 5227 5525 484 Size: 3372 879 492 298 1639 Fragments arranged by size: 3372 1639 879 492 298 BsaI GGTCTCn'nnnn_ Cuts at: 544 2305 2323 3245 3532 6384 544 Size: 1761 18 922 287 2852 840 Fragments arranged by size: 2852 1761 922 840 287 18 BsaAI yAC'GTr Cuts at: 3273 4033 3273 Size: 760 5920 BsaBI GATnn'nnATC Cuts at: 6 4194 6231 6 Size: 4188 2037 455 Fragments arranged by size: 4188 2037 455 BsaHI Gr'CG_yC Cuts at: 263 3290 3341 3356 3396 4111 4359 5061 6557 Size: 3027 51 15 40 715 248 702 1496 Cuts at: 6557 263 Size: 386 Fragments arranged by size: 3027 1496 715 702 386 248 51 40 15 BsaWI w'CCGG_w Cuts at: 1401 2985 3869 4390 5068 5342 5489 5900 1401 Size: 1584 884 521 678 274 147 411 2181 Fragments arranged by size: 2181 1584 884 678 521 411 274 147 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 2783 2813 3440 3470 3514 3544 2783 Size: 30 627 30 44 30 5919 Fragments arranged by size: 5919 627 44 30 30 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 1324 1643 2059 2323 3421 1324 Size: 319 416 264 1098 4583 Fragments arranged by size: 4583 1098 416 319 264 BseYI C'CCAG_C Cuts at: 121 378 991 1023 1073 1180 1225 1435 1847 Size: 257 613 32 50 107 45 210 412 Cuts at: 1847 2334 2660 2828 2833 3065 3293 3577 4105 Size: 487 326 168 5 232 228 284 528 Cuts at: 4105 4863 5440 5936 121 Size: 758 577 496 865 Fragments arranged by size: 865 758 613 577 528 496 487 412 326 284 257 232 228 210 168 107 50 45 32 5 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 199 835 2821 2905 3508 199 Size: 636 1986 84 603 3371 Fragments arranged by size: 3371 1986 636 603 84 BsiEI CG_ry'CG Cuts at: 104 3332 4222 4268 5476 104 Size: 3228 890 46 1208 1308 Fragments arranged by size: 3228 1308 1208 890 46 BsiHKAI G_wGCw'C Cuts at: 274 573 2053 2131 2702 3505 3694 4472 4662 Size: 299 1480 78 571 803 189 778 190 Cuts at: 4662 5454 274 Size: 792 1500 Fragments arranged by size: 1500 1480 803 792 778 571 299 190 189 78 BsmI GAATG_Cn' Cuts at: 433 743 1892 433 Size: 310 1149 5221 Fragments arranged by size: 5221 1149 310 Bsp1286I G_dGCh'C Cuts at: 139 191 274 313 349 454 573 587 695 Size: 52 83 39 36 105 119 14 108 Cuts at: 695 767 815 932 1051 1338 1611 1637 1848 Size: 72 48 117 119 287 273 26 211 Cuts at: 1848 2053 2069 2131 2174 2208 2363 2660 2702 Size: 205 16 62 43 34 155 297 42 Cuts at: 2702 2787 2815 2908 3065 3094 3198 3236 3285 Size: 85 28 93 157 29 104 38 49 Cuts at: 3285 3328 3477 3505 3694 4305 4398 4472 4662 Size: 43 149 28 189 611 93 74 190 Cuts at: 4662 4724 5454 139 Size: 62 730 1365 Fragments arranged by size: 1365 730 611 297 287 273 211 205 190 189 157 155 149 119 119 117 108 105 104 93 93 85 83 74 72 62 62 52 49 48 43 43 42 39 38 36 34 29 28 28 26 16 14 BspEI T'CCGG_A Cuts at: 2985 5900 2985 Size: 2915 3765 BspHI T'CATG_A Cuts at: 5856 5856 Size: 6680 BspMI ACCTGCnnnn'nnnn_ Cuts at: 598 824 1787 3608 3730 3944 4246 4627 598 Size: 226 963 1821 122 214 302 381 2651 Fragments arranged by size: 2651 1821 963 381 302 226 214 122 BsrBI CCG'CTC Cuts at: 50 903 1827 4972 5026 6510 6675 50 Size: 853 924 3145 54 1484 165 55 Fragments arranged by size: 3145 1484 924 853 165 55 54 BsrDI GCAATG_nn' Cuts at: 1379 2141 2280 2746 4592 1379 Size: 762 139 466 1846 3467 Fragments arranged by size: 3467 1846 762 466 139 BsrFI r'CCGG_y Cuts at: 881 1317 1751 1964 4678 4859 5068 881 Size: 436 434 213 2714 181 209 2493 Fragments arranged by size: 2714 2493 436 434 213 209 181 BssSI C'ACGA_G Cuts at: 4951 5309 4951 Size: 358 6322 BstAPI GCAn_nnn'nTGC Cuts at: 1452 1913 4057 1452 Size: 461 2144 4075 Fragments arranged by size: 4075 2144 461 BstBI TT'CG_AA Cuts at: 5041 5041 Size: 6680 BstXI CCAn_nnnn'nTGG Cuts at: 284 561 641 862 1618 2496 2841 2955 284 Size: 277 80 221 756 878 345 114 4009 Fragments arranged by size: 4009 878 756 345 277 221 114 80 BstYI r'GATC_y Cuts at: 1 557 735 1116 2531 2735 3705 4172 4195 Size: 556 178 381 1415 204 970 467 23 Cuts at: 4195 4530 4776 5788 5874 5886 6232 1 Size: 335 246 1012 86 12 346 449 Fragments arranged by size: 1415 1012 970 556 467 449 381 346 335 246 204 178 86 23 12 BstZ17I GTA'TAC Cuts at: 669 669 Size: 6680 Bsu36I CC'TnA_GG Cuts at: 1301 1301 Size: 6680 BtgI C'CryG_G Cuts at: 107 219 1920 2039 2402 3003 3650 107 Size: 112 1701 119 363 601 647 3137 Fragments arranged by size: 3137 1701 647 601 363 119 112 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 1016 1959 4630 4811 4974 1016 Size: 943 2671 181 163 2722 Fragments arranged by size: 2722 2671 943 181 163 BtsI GCAGTG_nn' Cuts at: 531 847 1418 2129 2172 3175 3644 3923 531 Size: 316 571 711 43 1003 469 279 3288 Fragments arranged by size: 3288 1003 711 571 469 316 279 43 ClaI AT'CG_AT Cuts at: 1465 1465 Size: 6680 DraI TTT'AAA Cuts at: 3679 3679 Size: 6680 DraIII CAC_nnn'GTG Cuts at: 3266 3486 3266 Size: 220 6460 DrdI GACnn_nn'nnGTC Cuts at: 4386 5244 4386 Size: 858 5822 EaeI y'GGCC_r Cuts at: 492 879 1396 1524 2352 3137 3329 3647 4265 Size: 387 517 128 828 785 192 318 618 Cuts at: 4265 4439 4830 4857 6202 492 Size: 174 391 27 1345 970 Fragments arranged by size: 1345 970 828 785 618 517 391 387 318 192 174 128 27 EagI C'GGCC_G Cuts at: 3329 4265 3329 Size: 936 5744 EarI CTCTTCn'nnn_ Cuts at: 910 1933 2695 4703 4913 910 Size: 1023 762 2008 210 2677 Fragments arranged by size: 2677 2008 1023 762 210 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 3292 4888 5198 5344 6490 3292 Size: 1596 310 146 1146 3482 Fragments arranged by size: 3482 1596 1146 310 146 EcoICRI GAG'CTC Cuts at: 571 3692 571 Size: 3121 3559 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 151 568 583 687 1171 1264 1522 1537 1640 Size: 417 15 104 484 93 258 15 103 Cuts at: 1640 1698 2088 2591 2724 3079 3298 3367 3421 Size: 58 390 503 133 355 219 69 54 Cuts at: 3421 4505 4937 5684 5952 151 Size: 1084 432 747 268 879 Fragments arranged by size: 1084 879 747 503 484 432 417 390 355 268 258 219 133 104 103 93 69 58 54 15 15 EcoNI CCTnn'n_nnAGG Cuts at: 255 1412 1673 2630 2692 3403 3436 255 Size: 1157 261 957 62 711 33 3499 Fragments arranged by size: 3499 1157 957 711 261 62 33 EcoO109I rG'GnC_Cy Cuts at: 309 310 345 346 1146 1214 1335 1513 1542 Size: 1 35 1 800 68 121 178 29 Cuts at: 1542 1833 2205 2359 2360 2586 3441 3492 3574 Size: 291 372 154 1 226 855 51 82 Cuts at: 3574 3819 309 Size: 245 3170 Fragments arranged by size: 3170 855 800 372 291 245 226 178 154 121 82 68 51 35 29 1 1 1 EcoRI G'AATT_C Cuts at: 3684 3684 Size: 6680 EcoRV GAT'ATC Cuts at: 2163 2163 Size: 6680 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 783 3226 4699 783 Size: 2443 1473 2764 Fragments arranged by size: 2764 2443 1473 FspI TGC'GCA Cuts at: 2581 4461 2581 Size: 1880 4800 HaeII r_GCGC'y Cuts at: 2809 3344 3359 3399 4114 4362 5384 6363 2809 Size: 535 15 40 715 248 1022 979 3126 Fragments arranged by size: 3126 1022 979 715 535 248 40 15 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 1471 1503 2760 2792 2890 2922 4522 4552 4554 Size: 32 1257 32 98 32 1600 30 2 Cuts at: 4554 4584 1471 Size: 30 3567 Fragments arranged by size: 3567 1600 1257 98 32 32 32 30 30 2 HincII GTy'rAC Cuts at: 372 3719 372 Size: 3347 3333 KasI G'GCGC_C Cuts at: 3340 3355 3395 4110 4358 3340 Size: 15 40 715 248 5662 Fragments arranged by size: 5662 715 248 40 15 KpnI G_GTAC'C Cuts at: 1020 3700 1020 Size: 2680 4000 MluI A'CGCG_T Cuts at: 6113 6113 Size: 6680 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 5351 5535 5351 Size: 184 6496 MscI TGG'CCA Cuts at: 494 1526 4441 494 Size: 1032 2915 2733 Fragments arranged by size: 2915 2733 1032 MslI CAynn'nnrTG Cuts at: 488 635 1044 2134 3157 4669 4796 488 Size: 147 409 1090 1023 1512 127 2372 Fragments arranged by size: 2372 1512 1090 1023 409 147 127 MspA1I CmG'CkG Cuts at: 228 429 775 1023 1077 1618 1851 1955 2041 Size: 201 346 248 54 541 233 104 86 Cuts at: 2041 2326 2404 3368 3791 4105 4465 5478 5723 Size: 285 78 964 423 314 360 1013 245 Cuts at: 5723 228 Size: 1185 Fragments arranged by size: 1185 1013 964 541 423 360 346 314 285 248 245 233 201 104 86 78 54 NaeI GCC'GGC Cuts at: 883 1753 4861 883 Size: 870 3108 2702 Fragments arranged by size: 3108 2702 870 NarI GG'CG_CC Cuts at: 3341 3356 3396 4111 4359 3341 Size: 15 40 715 248 5662 Fragments arranged by size: 5662 715 248 40 15 NcoI C'CATG_G Cuts at: 107 219 1920 3003 107 Size: 112 1701 1083 3784 Fragments arranged by size: 3784 1701 1083 112 NgoMIV G'CCGG_C Cuts at: 881 1751 4859 881 Size: 870 3108 2702 Fragments arranged by size: 3108 2702 870 NspI r_CATG'y Cuts at: 324 3166 3733 4233 5140 324 Size: 2842 567 500 907 1864 Fragments arranged by size: 2842 1864 907 567 500 PasI CC'CwG_GG Cuts at: 306 662 1211 1732 2547 2632 306 Size: 356 549 521 815 85 4354 Fragments arranged by size: 4354 815 549 521 356 85 PciI A'CATG_T Cuts at: 5136 5136 Size: 6680 PflMI CCAn_nnn'nTGG Cuts at: 429 1003 2115 429 Size: 574 1112 4994 Fragments arranged by size: 4994 1112 574 PfoI T'CCnGG_A Cuts at: 560 1538 2495 2534 2693 560 Size: 978 957 39 159 4547 Fragments arranged by size: 4547 978 957 159 39 PmeI GTTT'AAAC Cuts at: 3679 3679 Size: 6680 PmlI CAC'GTG Cuts at: 3273 3273 Size: 6680 PpiI GAACnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 1186 1218 5819 5851 1186 Size: 32 4601 32 2015 Fragments arranged by size: 4601 2015 32 32 PpuMI rG'GwC_Cy Cuts at: 1513 1542 3574 1513 Size: 29 2032 4619 Fragments arranged by size: 4619 2032 29 PspOMI G'GGCC_C Cuts at: 309 345 1334 1844 2204 2359 309 Size: 36 989 510 360 155 4630 Fragments arranged by size: 4630 989 510 360 155 36 PsrI GAACnnnnnnTACnnnnnnn_nnnnn' Cuts at: 1000 1032 1000 Size: 32 6648 PstI C_TGCA'G Cuts at: 821 1425 1688 1909 1960 2654 3471 3727 4412 Size: 604 263 221 51 694 817 256 685 Cuts at: 4412 821 Size: 3089 Fragments arranged by size: 3089 817 694 685 604 263 256 221 51 PvuI CG_AT'CG Cuts at: 104 104 Size: 6680 PvuII CAG'CTG Cuts at: 775 1023 1618 3368 4105 4465 775 Size: 248 595 1750 737 360 2990 Fragments arranged by size: 2990 1750 737 595 360 248 RsrII CG'GwC_CG Cuts at: 4875 4875 Size: 6680 SacI G_AGCT'C Cuts at: 573 3694 573 Size: 3121 3559 SacII CC_GC'GG Cuts at: 2042 2405 2042 Size: 363 6317 SalI G'TCGA_C Cuts at: 3717 3717 Size: 6680 SanDI GG'GwC_CC Cuts at: 3574 3574 Size: 6680 SapI GCTCTTCn'nnn_ Cuts at: 910 4703 4913 910 Size: 3793 210 2677 Fragments arranged by size: 3793 2677 210 SbfI CC_TGCA'GG Cuts at: 3471 3727 3471 Size: 256 6424 ScaI AGT'ACT Cuts at: 2992 6197 2992 Size: 3205 3475 SexAI A'CCwGG_T Cuts at: 2141 3143 3482 2141 Size: 1002 339 5339 Fragments arranged by size: 5339 1002 339 SfcI C'TryA_G Cuts at: 33 817 1421 1684 1905 1956 2650 3467 3723 Size: 784 604 263 221 51 694 817 256 Cuts at: 3723 4408 5401 5592 33 Size: 685 993 191 1121 Fragments arranged by size: 1121 993 817 784 694 685 604 263 256 221 191 51 SfoI GGC'GCC Cuts at: 3342 3357 3397 4112 4360 3342 Size: 15 40 715 248 5662 Fragments arranged by size: 5662 715 248 40 15 SgfI GCG_AT'CGC Cuts at: 104 104 Size: 6680 SmaI CCC'GGG Cuts at: 1547 2197 2211 2573 3702 1547 Size: 650 14 362 1129 4525 Fragments arranged by size: 4525 1129 650 362 14 SmlI C'TyrA_G Cuts at: 203 499 3835 4750 5242 5504 203 Size: 296 3336 915 492 262 1379 Fragments arranged by size: 3336 1379 915 492 296 262 SpeI A'CTAG_T Cuts at: 67 67 Size: 6680 SphI G_CATG'C Cuts at: 3166 3733 4233 3166 Size: 567 500 5613 Fragments arranged by size: 5613 567 500 StuI AGG'CCT Cuts at: 962 1201 1766 3218 962 Size: 239 565 1452 4424 Fragments arranged by size: 4424 1452 565 239 StyI C'CwwG_G Cuts at: 107 219 314 767 1011 1042 1860 1920 3003 Size: 112 95 453 244 31 818 60 1083 Cuts at: 3003 3814 4168 107 Size: 811 354 2619 Fragments arranged by size: 2619 1083 818 811 453 354 244 112 95 60 31 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 570 1087 1116 1814 1951 2299 4263 4396 4855 Size: 517 29 698 137 348 1964 133 459 Cuts at: 4855 5064 570 Size: 209 2186 Fragments arranged by size: 2186 1964 698 517 459 348 209 137 133 29 TatI w'GTAC_w Cuts at: 2990 6195 2990 Size: 3205 3475 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 1789 1821 2783 2815 3440 3472 3514 3546 6197 Size: 32 962 32 625 32 42 32 2651 Cuts at: 6197 6229 1789 Size: 32 2240 Fragments arranged by size: 2651 2240 962 625 42 32 32 32 32 32 Tth111I GACn'n_nGTC Cuts at: 3145 4477 3145 Size: 1332 5348 XbaI T'CTAG_A Cuts at: 3711 3711 Size: 6680 XcmI CCAnnnn_n'nnnnTGG Cuts at: 2112 3182 4175 2112 Size: 1070 993 4617 Fragments arranged by size: 4617 1070 993 XhoI C'TCGA_G Cuts at: 203 203 Size: 6680 XmaI C'CCGG_G Cuts at: 1545 2195 2209 2571 3700 1545 Size: 650 14 362 1129 4525 Fragments arranged by size: 4525 1129 650 362 14 XmnI GAAnn'nnTTC Cuts at: 3205 3205 Size: 6680 Enzymes that do cut: AarI AccI Acc65I AclI AcuI AflIII AgeI AleI AlfI AloI AlwNI ApaI ApaLI ApoI AseI AsiSI AvaI BamHI BanI BanII BbeI BbsI BcgI BciVI BclI BglI BglII BlpI Bme1580I BmrI BplI BpmI Bpu10I BpuEI BsaI BsaAI BsaBI BsaHI BsaWI BsaXI BseRI BseYI BsgI BsiEI BsiHKAI BsmI Bsp1286I BspEI BspHI BspMI BsrBI BsrDI BsrFI BssSI BstAPI BstBI BstXI BstYI BstZ17I Bsu36I BtgI BtgZI BtsI ClaI DraI DraIII DrdI EaeI EagI EarI EciI EcoICRI Eco57MI EcoNI EcoO109I EcoRI EcoRV FalI FspI HaeII Hin4I HincII KasI KpnI MluI MmeI MscI MslI MspA1I NaeI NarI NcoI NgoMIV NspI PasI PciI PflMI PfoI PmeI PmlI PpiI PpuMI PspOMI PsrI PstI PvuI PvuII RsrII SacI SacII SalI SanDI SapI SbfI ScaI SexAI SfcI SfoI SgfI SmaI SmlI SpeI SphI StuI StyI TaqII TatI TstI Tth111I XbaI XcmI XhoI XmaI XmnI Enzymes that do not cut: AatII AfeI AflII AhdI AscI AvrII BaeI BbvCI BfrBI BmgBI BmtI BsiWI BsmBI BsrGI BssHII BstEII CspCI FseI FspAI HindIII HpaI MfeI NdeI NheI NotI NruI NsiI PacI PshAI PsiI PspXI SfiI SgrAI SnaBI SrfI SspI SwaI ZraI