Result of FASTA (omim) for
pF1KB3441
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3441, 340 aa
1>>>pF1KB3441 340 - 340 aa - 340 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.7154+/-0.000569; mu= 9.0991+/- 0.034
mean_var=151.1202+/-31.058, 0's: 0 Z-trim(110.8): 484 B-trim: 279 in 2/48
Lambda= 0.104331
statistics sampled from 18597 (19217) to 18597 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.576), E-opt: 0.2 (0.225), width: 16
Scan time: 7.470
The best scores are: opt bits E(85289)
XP_016856550 (OMIM: 139380,613065,616973) PREDICTE ( 340) 2322 362.0 1e-99
XP_016856548 (OMIM: 139380,613065,616973) PREDICTE ( 340) 2322 362.0 1e-99
NP_002065 (OMIM: 139380,613065,616973) guanine nuc ( 340) 2322 362.0 1e-99
NP_001269468 (OMIM: 139380,613065,616973) guanine ( 340) 2322 362.0 1e-99
XP_016856549 (OMIM: 139380,613065,616973) PREDICTE ( 340) 2322 362.0 1e-99
NP_005264 (OMIM: 139390) guanine nucleotide-bindin ( 340) 2155 336.9 3.8e-92
XP_006713784 (OMIM: 610863,615185) PREDICTED: guan ( 340) 2152 336.5 5.1e-92
XP_005247749 (OMIM: 610863,615185) PREDICTED: guan ( 340) 2152 336.5 5.1e-92
NP_067642 (OMIM: 610863,615185) guanine nucleotide ( 340) 2152 336.5 5.1e-92
NP_002066 (OMIM: 139130,145500,617024) guanine nuc ( 340) 2027 317.6 2.4e-86
NP_001284500 (OMIM: 139130,145500,617024) guanine ( 339) 2002 313.9 3.2e-85
XP_011519255 (OMIM: 139130,145500,617024) PREDICTE ( 360) 1803 283.9 3.5e-76
NP_001269467 (OMIM: 139380,613065,616973) guanine ( 240) 1664 262.9 5.2e-70
NP_006569 (OMIM: 604447) guanine nucleotide-bindin ( 353) 1271 203.9 4.4e-52
NP_057278 (OMIM: 604447) guanine nucleotide-bindin ( 395) 1271 203.9 4.7e-52
XP_011519464 (OMIM: 604447) PREDICTED: guanine nuc ( 353) 1217 195.7 1.2e-49
XP_011519465 (OMIM: 604447) PREDICTED: guanine nuc ( 301) 1193 192.1 1.3e-48
XP_016877356 (OMIM: 604447) PREDICTED: guanine nuc ( 212) 826 136.7 4.5e-32
NP_060058 (OMIM: 609012) WD repeat-containing prot ( 334) 419 75.6 1.7e-13
XP_005272220 (OMIM: 609012) PREDICTED: WD repeat-c ( 334) 419 75.6 1.7e-13
NP_438172 (OMIM: 609012) WD repeat-containing prot ( 334) 419 75.6 1.7e-13
NP_001231855 (OMIM: 607795,615922) U4/U6 small nuc ( 521) 417 75.5 2.8e-13
NP_004688 (OMIM: 607795,615922) U4/U6 small nuclea ( 522) 417 75.5 2.9e-13
NP_008882 (OMIM: 601787) transcription initiation ( 800) 408 74.3 9.8e-13
NP_001309195 (OMIM: 607795,615922) U4/U6 small nuc ( 279) 385 70.4 5.2e-12
NP_001309196 (OMIM: 607795,615922) U4/U6 small nuc ( 279) 385 70.4 5.2e-12
NP_006089 (OMIM: 176981) receptor of activated pro ( 317) 363 67.1 5.6e-11
NP_001290177 (OMIM: 609540) WD repeat-containing p ( 212) 344 64.1 3.1e-10
NP_079510 (OMIM: 609540) WD repeat-containing prot ( 305) 344 64.3 4e-10
NP_001290176 (OMIM: 609540) WD repeat-containing p ( 305) 344 64.3 4e-10
XP_011520396 (OMIM: 609540) PREDICTED: WD repeat-c ( 305) 344 64.3 4e-10
NP_001186706 (OMIM: 614784,615973) POC1 centriolar ( 436) 343 64.3 5.7e-10
NP_758440 (OMIM: 614784,615973) POC1 centriolar pr ( 478) 343 64.3 6e-10
NP_005877 (OMIM: 602703,616212) katanin p80 WD40 r ( 655) 335 63.2 1.7e-09
XP_016878353 (OMIM: 602703,616212) PREDICTED: kata ( 655) 335 63.2 1.7e-09
XP_016878352 (OMIM: 602703,616212) PREDICTED: kata ( 655) 335 63.2 1.7e-09
XP_006721186 (OMIM: 602703,616212) PREDICTED: kata ( 658) 335 63.2 1.7e-09
XP_016878350 (OMIM: 602703,616212) PREDICTED: kata ( 672) 335 63.3 1.8e-09
XP_016878351 (OMIM: 602703,616212) PREDICTED: kata ( 672) 335 63.3 1.8e-09
XP_005255829 (OMIM: 602703,616212) PREDICTED: kata ( 672) 335 63.3 1.8e-09
XP_016878349 (OMIM: 602703,616212) PREDICTED: kata ( 675) 335 63.3 1.8e-09
XP_006721184 (OMIM: 602703,616212) PREDICTED: kata ( 675) 335 63.3 1.8e-09
XP_006721185 (OMIM: 602703,616212) PREDICTED: kata ( 675) 335 63.3 1.8e-09
XP_011521112 (OMIM: 602703,616212) PREDICTED: kata ( 675) 335 63.3 1.8e-09
NP_004805 (OMIM: 607797) U5 small nuclear ribonucl ( 357) 329 62.1 2.1e-09
NP_387449 (OMIM: 605651) F-box/WD repeat-containin ( 508) 330 62.4 2.4e-09
XP_016864770 (OMIM: 605651) PREDICTED: F-box/WD re ( 510) 330 62.4 2.5e-09
XP_016864769 (OMIM: 605651) PREDICTED: F-box/WD re ( 510) 330 62.4 2.5e-09
XP_005265915 (OMIM: 605651) PREDICTED: F-box/WD re ( 510) 330 62.4 2.5e-09
XP_005265914 (OMIM: 605651) PREDICTED: F-box/WD re ( 515) 330 62.4 2.5e-09
>>XP_016856550 (OMIM: 139380,613065,616973) PREDICTED: g (340 aa)
initn: 2322 init1: 2322 opt: 2322 Z-score: 1911.2 bits: 362.0 E(85289): 1e-99
Smith-Waterman score: 2322; 100.0% identity (100.0% similar) in 340 aa overlap (1-340:1-340)
10 20 30 40 50 60
pF1KB3 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
250 260 270 280 290 300
310 320 330 340
pF1KB3 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
::::::::::::::::::::::::::::::::::::::::
XP_016 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
310 320 330 340
>>XP_016856548 (OMIM: 139380,613065,616973) PREDICTED: g (340 aa)
initn: 2322 init1: 2322 opt: 2322 Z-score: 1911.2 bits: 362.0 E(85289): 1e-99
Smith-Waterman score: 2322; 100.0% identity (100.0% similar) in 340 aa overlap (1-340:1-340)
10 20 30 40 50 60
pF1KB3 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
250 260 270 280 290 300
310 320 330 340
pF1KB3 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
::::::::::::::::::::::::::::::::::::::::
XP_016 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
310 320 330 340
>>NP_002065 (OMIM: 139380,613065,616973) guanine nucleot (340 aa)
initn: 2322 init1: 2322 opt: 2322 Z-score: 1911.2 bits: 362.0 E(85289): 1e-99
Smith-Waterman score: 2322; 100.0% identity (100.0% similar) in 340 aa overlap (1-340:1-340)
10 20 30 40 50 60
pF1KB3 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
250 260 270 280 290 300
310 320 330 340
pF1KB3 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
::::::::::::::::::::::::::::::::::::::::
NP_002 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
310 320 330 340
>>NP_001269468 (OMIM: 139380,613065,616973) guanine nucl (340 aa)
initn: 2322 init1: 2322 opt: 2322 Z-score: 1911.2 bits: 362.0 E(85289): 1e-99
Smith-Waterman score: 2322; 100.0% identity (100.0% similar) in 340 aa overlap (1-340:1-340)
10 20 30 40 50 60
pF1KB3 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
250 260 270 280 290 300
310 320 330 340
pF1KB3 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
::::::::::::::::::::::::::::::::::::::::
NP_001 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
310 320 330 340
>>XP_016856549 (OMIM: 139380,613065,616973) PREDICTED: g (340 aa)
initn: 2322 init1: 2322 opt: 2322 Z-score: 1911.2 bits: 362.0 E(85289): 1e-99
Smith-Waterman score: 2322; 100.0% identity (100.0% similar) in 340 aa overlap (1-340:1-340)
10 20 30 40 50 60
pF1KB3 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
250 260 270 280 290 300
310 320 330 340
pF1KB3 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
::::::::::::::::::::::::::::::::::::::::
XP_016 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
310 320 330 340
>>NP_005264 (OMIM: 139390) guanine nucleotide-binding pr (340 aa)
initn: 2155 init1: 2155 opt: 2155 Z-score: 1775.4 bits: 336.9 E(85289): 3.8e-92
Smith-Waterman score: 2155; 90.3% identity (97.1% similar) in 340 aa overlap (1-340:1-340)
10 20 30 40 50 60
pF1KB3 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
::::.:::::::::.::::::::::.:.::.::: ..:::::::::::::::::::::::
NP_005 MSELEQLRQEAEQLRNQIRDARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::
NP_005 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
::::.:::::::::::::: :::::::::::::::::.:::::::::::::::::::. :
NP_005 CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIETGQQTVGF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
.::.::::::::::: : ::::::::: ::::::..:::::: ::::::::. ::::: :
NP_005 AGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
:.:::::::::::::::::::. :::::::::::::.::.:::::::::::::::.:::.
NP_005 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM
250 260 270 280 290 300
310 320 330 340
pF1KB3 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
:.::::::::::::::::::::::::::::::::::::::
NP_005 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
310 320 330 340
>>XP_006713784 (OMIM: 610863,615185) PREDICTED: guanine (340 aa)
initn: 2152 init1: 2152 opt: 2152 Z-score: 1773.0 bits: 336.5 E(85289): 5.1e-92
Smith-Waterman score: 2152; 90.9% identity (96.8% similar) in 340 aa overlap (1-340:1-340)
10 20 30 40 50 60
pF1KB3 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
::::.:::::::::.:::.:::::: :::: :::.:.: :::::::::::::::::::::
XP_006 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
:::: ::::::::::::::::::::::::.::::::::::::::::::::::::::::::
XP_006 MHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
::::::::::::::::::: ::::::::::::::.::::::::::::::::::.::::::
XP_006 CSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
:::.::::::::.:: : :::::::::.::::.:.:::::.:::: :::::. ::::: :
XP_006 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
:::::::::::::::::::::. :::::::::::::.:::::::::::::::::::::.:
XP_006 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL
250 260 270 280 290 300
310 320 330 340
pF1KB3 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
:.::::::::::::::::::::::::::::::::::.:::
XP_006 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN
310 320 330 340
>>XP_005247749 (OMIM: 610863,615185) PREDICTED: guanine (340 aa)
initn: 2152 init1: 2152 opt: 2152 Z-score: 1773.0 bits: 336.5 E(85289): 5.1e-92
Smith-Waterman score: 2152; 90.9% identity (96.8% similar) in 340 aa overlap (1-340:1-340)
10 20 30 40 50 60
pF1KB3 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
::::.:::::::::.:::.:::::: :::: :::.:.: :::::::::::::::::::::
XP_005 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
:::: ::::::::::::::::::::::::.::::::::::::::::::::::::::::::
XP_005 MHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
::::::::::::::::::: ::::::::::::::.::::::::::::::::::.::::::
XP_005 CSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
:::.::::::::.:: : :::::::::.::::.:.:::::.:::: :::::. ::::: :
XP_005 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
:::::::::::::::::::::. :::::::::::::.:::::::::::::::::::::.:
XP_005 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL
250 260 270 280 290 300
310 320 330 340
pF1KB3 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
:.::::::::::::::::::::::::::::::::::.:::
XP_005 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN
310 320 330 340
>>NP_067642 (OMIM: 610863,615185) guanine nucleotide-bin (340 aa)
initn: 2152 init1: 2152 opt: 2152 Z-score: 1773.0 bits: 336.5 E(85289): 5.1e-92
Smith-Waterman score: 2152; 90.9% identity (96.8% similar) in 340 aa overlap (1-340:1-340)
10 20 30 40 50 60
pF1KB3 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
::::.:::::::::.:::.:::::: :::: :::.:.: :::::::::::::::::::::
NP_067 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
:::: ::::::::::::::::::::::::.::::::::::::::::::::::::::::::
NP_067 MHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
::::::::::::::::::: ::::::::::::::.::::::::::::::::::.::::::
NP_067 CSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
:::.::::::::.:: : :::::::::.::::.:.:::::.:::: :::::. ::::: :
NP_067 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
:::::::::::::::::::::. :::::::::::::.:::::::::::::::::::::.:
NP_067 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL
250 260 270 280 290 300
310 320 330 340
pF1KB3 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
:.::::::::::::::::::::::::::::::::::.:::
NP_067 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN
310 320 330 340
>>NP_002066 (OMIM: 139130,145500,617024) guanine nucleot (340 aa)
initn: 2027 init1: 2027 opt: 2027 Z-score: 1671.3 bits: 317.6 E(85289): 2.4e-86
Smith-Waterman score: 2027; 83.2% identity (96.8% similar) in 340 aa overlap (1-340:1-340)
10 20 30 40 50 60
pF1KB3 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
:.:..::::::::::.:: ::::::::.::........ :::.:::::::::::::::::
NP_002 MGEMEQLRQEAEQLKKQIADARKACADVTLAELVSGLEVVGRVQMRTRRTLRGHLAKIYA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
:::.:::.::::::::::::.:::::::::::::::::::::::::::::.::::::::.
NP_002 MHWATDSKLLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
:::::::.:::::.:::::..::::::::::::::.:::::::::::::::::::: :.:
NP_002 CSIYNLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDTTCALWDIETGQQKTVF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
.::::: :::...:: ::.:::::::::::::::: :::::::::::::::::::::.:
NP_002 VGHTGDCMSLAVSPDFNLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
. ::::::.::::::::::::. .::..::::::::.:: :::::.::::::::::::..
NP_002 ICTGSDDASCRLFDLRADQELICFSHESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSM
250 260 270 280 290 300
310 320 330 340
pF1KB3 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
:..:.:.:.:::::::::::: ::::::::::::::::::
NP_002 KSERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN
310 320 330 340
340 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 02:25:23 2016 done: Fri Nov 4 02:25:24 2016
Total Scan time: 7.470 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]