Result of FASTA (ccds) for
pF1KB3461
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3461, 215 aa
1>>>pF1KB3461 215 - 215 aa - 215 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2328+/-0.000966; mu= 14.0815+/- 0.059
mean_var=76.7608+/-15.421, 0's: 0 Z-trim(105.8): 215 B-trim: 250 in 1/52
Lambda= 0.146388
statistics sampled from 8407 (8648) to 8407 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.648), E-opt: 0.2 (0.266), width: 16
Scan time: 1.730
The best scores are: opt bits E(32554)
CCDS2633.1 RAB5A gene_id:5868|Hs108|chr3 ( 215) 1409 306.9 6.2e-84
CCDS11419.1 RAB5C gene_id:5878|Hs108|chr17 ( 216) 1228 268.7 2e-72
CCDS58551.1 RAB5C gene_id:5878|Hs108|chr17 ( 249) 1228 268.7 2.2e-72
CCDS8900.1 RAB5B gene_id:5869|Hs108|chr12 ( 215) 1178 258.1 3e-69
CCDS77710.1 RAB5A gene_id:5868|Hs108|chr3 ( 201) 967 213.5 7.4e-56
CCDS33497.1 RAB22A gene_id:57403|Hs108|chr20 ( 194) 633 143.0 1.2e-34
CCDS58244.1 RAB5B gene_id:5869|Hs108|chr12 ( 174) 629 142.1 2e-34
CCDS45826.1 RAB31 gene_id:11031|Hs108|chr18 ( 195) 604 136.9 8.6e-33
CCDS2520.1 RAB17 gene_id:64284|Hs108|chr2 ( 212) 563 128.2 3.7e-30
CCDS31613.1 RAB1B gene_id:81876|Hs108|chr11 ( 201) 560 127.6 5.5e-30
CCDS3082.1 RAB6B gene_id:51560|Hs108|chr3 ( 208) 559 127.4 6.6e-30
CCDS46306.1 RAB1A gene_id:5861|Hs108|chr2 ( 205) 549 125.3 2.8e-29
CCDS8223.1 RAB6A gene_id:5870|Hs108|chr11 ( 208) 548 125.1 3.3e-29
CCDS8224.1 RAB6A gene_id:5870|Hs108|chr11 ( 208) 544 124.2 5.9e-29
CCDS9003.1 RAB21 gene_id:23011|Hs108|chr12 ( 225) 514 117.9 5.1e-27
CCDS82514.1 WTH3DI gene_id:150786|Hs108|chr2 ( 254) 508 116.7 1.3e-26
CCDS11703.1 RAB37 gene_id:326624|Hs108|chr17 ( 216) 507 116.4 1.4e-26
CCDS46408.1 RAB6C gene_id:84084|Hs108|chr2 ( 254) 502 115.4 3.2e-26
CCDS12201.1 RAB11B gene_id:9230|Hs108|chr19 ( 218) 498 114.5 5.2e-26
CCDS1058.1 RAB13 gene_id:5872|Hs108|chr1 ( 203) 494 113.6 8.8e-26
CCDS41413.1 RAB25 gene_id:57111|Hs108|chr1 ( 213) 493 113.4 1.1e-25
CCDS8264.1 RAB30 gene_id:27314|Hs108|chr11 ( 203) 491 113.0 1.4e-25
CCDS10183.1 RAB8B gene_id:51762|Hs108|chr15 ( 207) 490 112.8 1.6e-25
CCDS12339.1 RAB8A gene_id:4218|Hs108|chr19 ( 207) 490 112.8 1.6e-25
CCDS10212.1 RAB11A gene_id:8766|Hs108|chr15 ( 216) 487 112.2 2.6e-25
CCDS9570.1 RAB2B gene_id:84932|Hs108|chr14 ( 216) 479 110.5 8.3e-25
CCDS12257.1 RAB3D gene_id:9545|Hs108|chr19 ( 219) 479 110.5 8.3e-25
CCDS34762.2 RAB19 gene_id:401409|Hs108|chr7 ( 217) 478 110.3 9.6e-25
CCDS33030.1 RAB4B gene_id:53916|Hs108|chr19 ( 213) 477 110.1 1.1e-24
CCDS32722.1 RAB37 gene_id:326624|Hs108|chr17 ( 223) 476 109.9 1.3e-24
CCDS82198.1 RAB37 gene_id:326624|Hs108|chr17 ( 196) 475 109.6 1.4e-24
CCDS34300.1 RAB24 gene_id:53917|Hs108|chr5 ( 203) 475 109.6 1.4e-24
CCDS54161.1 RAB37 gene_id:326624|Hs108|chr17 ( 228) 475 109.7 1.5e-24
CCDS33850.1 RAB43 gene_id:339122|Hs108|chr3 ( 212) 474 109.4 1.7e-24
CCDS6175.1 RAB2A gene_id:5862|Hs108|chr8 ( 212) 468 108.2 4.1e-24
CCDS6827.1 RAB14 gene_id:51552|Hs108|chr9 ( 215) 468 108.2 4.1e-24
CCDS31050.1 RAB4A gene_id:5867|Hs108|chr1 ( 218) 466 107.8 5.6e-24
CCDS35322.2 RAB41 gene_id:347517|Hs108|chrX ( 221) 465 107.5 6.5e-24
CCDS1720.1 RAB10 gene_id:10890|Hs108|chr2 ( 200) 463 107.1 8.1e-24
CCDS7155.1 RAB18 gene_id:22931|Hs108|chr10 ( 206) 462 106.9 9.6e-24
CCDS10460.1 RAB26 gene_id:25837|Hs108|chr16 ( 256) 462 107.0 1.1e-23
CCDS41846.1 RAB35 gene_id:11021|Hs108|chr12 ( 201) 444 103.1 1.3e-22
CCDS12372.1 RAB3A gene_id:5864|Hs108|chr19 ( 220) 441 102.5 2.2e-22
CCDS3976.1 RAB3C gene_id:115827|Hs108|chr5 ( 227) 440 102.3 2.6e-22
CCDS58155.1 RAB6A gene_id:5870|Hs108|chr11 ( 175) 436 101.3 3.8e-22
CCDS76806.1 RAB26 gene_id:25837|Hs108|chr16 ( 190) 433 100.7 6.3e-22
CCDS58373.1 RAB11A gene_id:8766|Hs108|chr15 ( 155) 431 100.2 7.2e-22
CCDS3052.1 RAB7A gene_id:7879|Hs108|chr3 ( 207) 426 99.3 1.9e-21
CCDS76691.1 RAB15 gene_id:376267|Hs108|chr14 ( 212) 426 99.3 1.9e-21
CCDS560.1 RAB3B gene_id:5865|Hs108|chr1 ( 219) 421 98.3 4.1e-21
>>CCDS2633.1 RAB5A gene_id:5868|Hs108|chr3 (215 aa)
initn: 1409 init1: 1409 opt: 1409 Z-score: 1620.4 bits: 306.9 E(32554): 6.2e-84
Smith-Waterman score: 1409; 100.0% identity (100.0% similar) in 215 aa overlap (1-215:1-215)
10 20 30 40 50 60
pF1KB3 MASRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS26 MASRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS26 TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 QASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS26 QASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKK
130 140 150 160 170 180
190 200 210
pF1KB3 LPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN
:::::::::::::::::::::::::::::::::::
CCDS26 LPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN
190 200 210
>>CCDS11419.1 RAB5C gene_id:5878|Hs108|chr17 (216 aa)
initn: 1221 init1: 1221 opt: 1228 Z-score: 1413.8 bits: 268.7 E(32554): 2e-72
Smith-Waterman score: 1228; 87.0% identity (94.9% similar) in 216 aa overlap (1-215:1-216)
10 20 30 40 50
pF1KB3 MASRG-ATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLT
::.:: :.::::: .:::::::::::::::::::::::::::::::::.:::::::::::
CCDS11 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB3 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQ
::::::::::::::::::::::::::::::::::::::::::::: ..::::::::::::
CCDS11 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB3 RQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAK
:::::::::::.:::::::.::::.:::::.::::::::::::::::.::::::::::::
CCDS11 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
130 140 150 160 170 180
180 190 200 210
pF1KB3 KLPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN
::::::::: . .:.::::: : . .:.:::::
CCDS11 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN
190 200 210
>>CCDS58551.1 RAB5C gene_id:5878|Hs108|chr17 (249 aa)
initn: 1221 init1: 1221 opt: 1228 Z-score: 1412.9 bits: 268.7 E(32554): 2.2e-72
Smith-Waterman score: 1228; 87.0% identity (94.9% similar) in 216 aa overlap (1-215:34-249)
10 20
pF1KB3 MASRG-ATRPNGPNTGNKICQFKLVLLGES
::.:: :.::::: .:::::::::::::::
CCDS58 SWRSPSPLSASLHSTSPHPHALWTTTAGRAMAGRGGAARPNGPAAGNKICQFKLVLLGES
10 20 30 40 50 60
30 40 50 60 70 80
pF1KB3 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY
::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::
CCDS58 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY
70 80 90 100 110 120
90 100 110 120 130 140
pF1KB3 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQ
::::::::::::::: ..:::::::::::::::::::::::.:::::::.::::.:::::
CCDS58 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQ
130 140 150 160 170 180
150 160 170 180 190 200
pF1KB3 SYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPTQPTR
.::::::::::::::::.::::::::::::::::::::: . .:.::::: : . .:
CCDS58 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNRGVDLQENNPASR
190 200 210 220 230 240
210
pF1KB3 NQCCSN
.:::::
CCDS58 SQCCSN
>>CCDS8900.1 RAB5B gene_id:5869|Hs108|chr12 (215 aa)
initn: 1178 init1: 1178 opt: 1178 Z-score: 1356.7 bits: 258.1 E(32554): 3e-69
Smith-Waterman score: 1178; 81.9% identity (95.8% similar) in 215 aa overlap (1-215:1-215)
10 20 30 40 50 60
pF1KB3 MASRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ
:.::...:::: ..:::::::::::::::::::::::::::::::.::::::::::::
CCDS89 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR
.:::::::::::::::::::::::::::::::::::::::::::.:.:::::.:::::::
CCDS89 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 QASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKK
::::.:::::.:::::::::: :...:::.::::::::::::::::.::::..:.:::::
CCDS89 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
130 140 150 160 170 180
190 200 210
pF1KB3 LPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN
:::.:::: :. ..:.::::: : .: ...:::::
CCDS89 LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
190 200 210
>>CCDS77710.1 RAB5A gene_id:5868|Hs108|chr3 (201 aa)
initn: 967 init1: 967 opt: 967 Z-score: 1116.3 bits: 213.5 E(32554): 7.4e-56
Smith-Waterman score: 1282; 93.5% identity (93.5% similar) in 215 aa overlap (1-215:1-201)
10 20 30 40 50 60
pF1KB3 MASRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 MASRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIG------
10 20 30 40 50
70 80 90 100 110 120
pF1KB3 TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR
::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 --------VKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR
60 70 80 90 100
130 140 150 160 170 180
pF1KB3 QASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 QASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKK
110 120 130 140 150 160
190 200 210
pF1KB3 LPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN
:::::::::::::::::::::::::::::::::::
CCDS77 LPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN
170 180 190 200
>>CCDS33497.1 RAB22A gene_id:57403|Hs108|chr20 (194 aa)
initn: 595 init1: 595 opt: 633 Z-score: 735.3 bits: 143.0 E(32554): 1.2e-34
Smith-Waterman score: 633; 49.2% identity (79.5% similar) in 195 aa overlap (20-213:5-194)
10 20 30 40 50 60
pF1KB3 MASRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ
..:. :::...:::::.: :::. .: . ::::.:.:.
CCDS33 MALRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTK
10 20 30 40
70 80 90 100 110 120
pF1KB3 TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR
:: .. :: :::::::::...::::::::. :::.:::::.::.:. :::::::..
CCDS33 TVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQ
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB3 QASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKK
.. ::::.:..::: :: . : : ..:..:::. .:.:::::...:.::.:. :...
CCDS33 HGPPNIVVAIAGNKCDLIDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRR
110 120 130 140 150 160
190 200 210
pF1KB3 LPKNEPQNPGANSARGRGVDLT-EPTQPTRNQCCSN
.:... . :.. :.: : .:..: :. ::
CCDS33 IPSTDANLPSG----GKGFKLRRQPSEPKRS-CC
170 180 190
>>CCDS58244.1 RAB5B gene_id:5869|Hs108|chr12 (174 aa)
initn: 622 init1: 622 opt: 629 Z-score: 731.4 bits: 142.1 E(32554): 2e-34
Smith-Waterman score: 871; 67.0% identity (77.2% similar) in 215 aa overlap (1-215:1-174)
10 20 30 40 50 60
pF1KB3 MASRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ
:.::...:::: ..:::::::::::::::::::::::::::::::.::::::::::::
CCDS58 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR
.:::::::::::::::::::::::::::::::::::::::::::
CCDS58 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN----------------
70 80 90 100
130 140 150 160 170 180
pF1KB3 QASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKK
::::.::::::::::::::::.::::..:.:::::
CCDS58 -------------------------QEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
110 120 130
190 200 210
pF1KB3 LPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN
:::.:::: :. ..:.::::: : .: ...:::::
CCDS58 LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
140 150 160 170
>>CCDS45826.1 RAB31 gene_id:11031|Hs108|chr18 (195 aa)
initn: 578 init1: 549 opt: 604 Z-score: 702.2 bits: 136.9 E(32554): 8.6e-33
Smith-Waterman score: 604; 45.9% identity (78.1% similar) in 196 aa overlap (18-213:4-195)
10 20 30 40 50 60
pF1KB3 MASRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ
: ..:. :::...:::::.: :::. .: . ::::.:.:.
CCDS45 MMAIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTK
10 20 30 40
70 80 90 100 110 120
pF1KB3 TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR
:: . :: :::::::::.::::::::::. ::..:::::...:: :.:::::..
CCDS45 TVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKE
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB3 QASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKK
.. :::.:..::: ::.. : : ...:. ::.. . . .:::::...:..:.:..:...
CCDS45 HGPENIVMAIAGNKCDLSDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQ
110 120 130 140 150 160
190 200 210
pF1KB3 LPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN
.: .:.. : :.. . . .::. . .::
CCDS45 IPPLDPHENGNNGT----IKVEKPTMQASRRCC
170 180 190
>>CCDS2520.1 RAB17 gene_id:64284|Hs108|chr2 (212 aa)
initn: 499 init1: 272 opt: 563 Z-score: 654.9 bits: 128.2 E(32554): 3.7e-30
Smith-Waterman score: 563; 44.4% identity (79.1% similar) in 196 aa overlap (21-215:20-212)
10 20 30 40 50 60
pF1KB3 MASRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ
::::::: ..::::::.::.::..:. . :.: ::.:.
CCDS25 MAQAHRTPQPRAAPSQPRVFKLVLLGSGSVGKSSLALRYVKNDFKSILP-TVGCAFFTK
10 20 30 40 50
70 80 90 100 110 120
pF1KB3 TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR
.: . :..:.:::::::::.:::. .:.:::.::..::::: ..:: .:..:.:.:..
CCDS25 VVDVGATSLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEE
60 70 80 90 100 110
130 140 150 160 170
pF1KB3 QASPN-IVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAK
. :. ... : :::.::...: : :::.. .::...::::::::: . .:.:.: ..:.
CCDS25 ELHPGEVLVMLVGNKTDLSQEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQ
120 130 140 150 160 170
180 190 200 210
pF1KB3 KLPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN
.: . .. ... :: .. . . .::..
CCDS25 ELLQRSDEE--GQALRGDAAVALNKGPARQAKCCAH
180 190 200 210
>>CCDS31613.1 RAB1B gene_id:81876|Hs108|chr11 (201 aa)
initn: 546 init1: 546 opt: 560 Z-score: 651.8 bits: 127.6 E(32554): 5.5e-30
Smith-Waterman score: 560; 45.9% identity (75.5% similar) in 196 aa overlap (21-213:9-201)
10 20 30 40 50 60
pF1KB3 MASRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ
:::.:.:.:.:::: :.:::. . : ::::. : .
CCDS31 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIR
10 20 30 40
70 80 90 100 110 120
pF1KB3 TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR
:. :: :.:..:::::::::..... :::::.. :::::.:..::.: .:.:..:..:
CCDS31 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDR
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB3 QASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKK
:: :. : :::.::..:..:: :. .::. .. :.:::::.. ::.. ::..: .
CCDS31 YASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAE
110 120 130 140 150 160
190 200 210
pF1KB3 LPKNEPQNPGANSARGRG---VDLTEPTQPTRNQCCSN
. : ..::: :. : .: : :..:. . ::
CCDS31 IKKR--MGPGAASGGERPNLKIDST-PVKPAGGGCC
170 180 190 200
215 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 21:04:44 2016 done: Fri Nov 4 21:04:45 2016
Total Scan time: 1.730 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]