Result of FASTA (omim) for
pF1KB3465
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3465, 345 aa
1>>>pF1KB3465 345 - 345 aa - 345 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 12.3991+/-0.000437; mu= -15.0253+/- 0.027
mean_var=560.7353+/-124.761, 0's: 0 Z-trim(123.4): 950 B-trim: 0 in 0/55
Lambda= 0.054162
statistics sampled from 41774 (43207) to 41774 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.807), E-opt: 0.2 (0.507), width: 16
Scan time: 9.580
The best scores are: opt bits E(85289)
NP_057615 (OMIM: 609392) Krueppel-like factor 3 [H ( 345) 2404 202.0 1.5e-51
XP_016863768 (OMIM: 609392) PREDICTED: Krueppel-li ( 320) 2232 188.6 1.6e-47
XP_016875874 (OMIM: 607531) PREDICTED: Krueppel-li ( 352) 668 66.4 1.1e-10
XP_011533213 (OMIM: 607531) PREDICTED: Krueppel-li ( 383) 668 66.4 1.1e-10
XP_011533214 (OMIM: 607531) PREDICTED: Krueppel-li ( 383) 668 66.4 1.1e-10
XP_016875873 (OMIM: 607531) PREDICTED: Krueppel-li ( 393) 668 66.4 1.2e-10
XP_011533212 (OMIM: 607531) PREDICTED: Krueppel-li ( 400) 668 66.5 1.2e-10
NP_009180 (OMIM: 607531) Krueppel-like factor 12 [ ( 402) 668 66.5 1.2e-10
XP_011533211 (OMIM: 607531) PREDICTED: Krueppel-li ( 402) 668 66.5 1.2e-10
XP_005266308 (OMIM: 607531) PREDICTED: Krueppel-li ( 402) 668 66.5 1.2e-10
XP_011533209 (OMIM: 607531) PREDICTED: Krueppel-li ( 415) 668 66.5 1.2e-10
NP_001311034 (OMIM: 300286) Krueppel-like factor 8 ( 356) 665 66.2 1.3e-10
NP_001311031 (OMIM: 300286) Krueppel-like factor 8 ( 359) 665 66.2 1.3e-10
XP_005262036 (OMIM: 300286) PREDICTED: Krueppel-li ( 359) 665 66.2 1.3e-10
NP_009181 (OMIM: 300286) Krueppel-like factor 8 is ( 359) 665 66.2 1.3e-10
XP_005262034 (OMIM: 300286) PREDICTED: Krueppel-li ( 359) 665 66.2 1.3e-10
NP_001311033 (OMIM: 300286) Krueppel-like factor 8 ( 364) 665 66.2 1.3e-10
XP_016884739 (OMIM: 300286) PREDICTED: Krueppel-li ( 354) 655 65.4 2.2e-10
XP_011529061 (OMIM: 300286) PREDICTED: Krueppel-li ( 354) 655 65.4 2.2e-10
NP_001273747 (OMIM: 602903) Krueppel-like factor 5 ( 366) 624 63.0 1.2e-09
NP_001721 (OMIM: 602903) Krueppel-like factor 5 is ( 457) 624 63.1 1.4e-09
NP_001291 (OMIM: 176807,602053,613659) Krueppel-li ( 283) 576 59.1 1.3e-08
NP_004226 (OMIM: 602253) Krueppel-like factor 4 is ( 479) 582 59.8 1.4e-08
NP_001257872 (OMIM: 604865) Krueppel-like factor 7 ( 269) 558 57.7 3.4e-08
NP_001257873 (OMIM: 604865) Krueppel-like factor 7 ( 274) 558 57.7 3.5e-08
XP_016860650 (OMIM: 604865) PREDICTED: Krueppel-li ( 302) 558 57.7 3.7e-08
NP_003700 (OMIM: 604865) Krueppel-like factor 7 is ( 302) 558 57.7 3.7e-08
XP_011510376 (OMIM: 604865) PREDICTED: Krueppel-li ( 270) 546 56.7 6.6e-08
XP_011510375 (OMIM: 604865) PREDICTED: Krueppel-li ( 272) 546 56.7 6.7e-08
XP_016860651 (OMIM: 604865) PREDICTED: Krueppel-li ( 275) 546 56.7 6.7e-08
XP_011510374 (OMIM: 604865) PREDICTED: Krueppel-li ( 303) 546 56.8 7.2e-08
XP_006712878 (OMIM: 604865) PREDICTED: Krueppel-li ( 303) 546 56.8 7.2e-08
XP_005246983 (OMIM: 604865) PREDICTED: Krueppel-li ( 303) 546 56.8 7.2e-08
NP_001300981 (OMIM: 602253) Krueppel-like factor 4 ( 513) 543 56.8 1.2e-07
NP_057354 (OMIM: 602016) Krueppel-like factor 2 [H ( 355) 529 55.5 2e-07
XP_011525944 (OMIM: 111150,600599,613566,613673) P ( 324) 505 53.6 6.9e-07
NP_006554 (OMIM: 111150,600599,613566,613673) Krue ( 362) 505 53.7 7.4e-07
XP_005247457 (OMIM: 606465) PREDICTED: Krueppel-li ( 416) 473 51.2 4.6e-06
NP_054798 (OMIM: 606465) Krueppel-like factor 15 [ ( 416) 473 51.2 4.6e-06
XP_011511045 (OMIM: 606465) PREDICTED: Krueppel-li ( 435) 473 51.3 4.8e-06
XP_011539002 (OMIM: 609602) PREDICTED: Krueppel-li ( 352) 466 50.6 6e-06
NP_775755 (OMIM: 609602) Krueppel-like factor 17 [ ( 389) 466 50.7 6.4e-06
NP_057079 (OMIM: 605328,612001) Krueppel-like fact ( 288) 457 49.8 8.6e-06
NP_001027453 (OMIM: 601878) Krueppel-like factor 1 ( 469) 460 50.3 1e-05
NP_005646 (OMIM: 601878) Krueppel-like factor 10 i ( 480) 460 50.3 1e-05
NP_001197 (OMIM: 602902) Krueppel-like factor 9 [H ( 244) 440 48.4 1.9e-05
NP_001171187 (OMIM: 603301,610508) Krueppel-like f ( 495) 448 49.4 2e-05
NP_001171189 (OMIM: 603301,610508) Krueppel-like f ( 495) 448 49.4 2e-05
NP_003588 (OMIM: 603301,610508) Krueppel-like fact ( 512) 448 49.4 2.1e-05
NP_000369 (OMIM: 106210,136680,156240,194070,19407 ( 497) 437 48.5 3.7e-05
>>NP_057615 (OMIM: 609392) Krueppel-like factor 3 [Homo (345 aa)
initn: 2404 init1: 2404 opt: 2404 Z-score: 1046.3 bits: 202.0 E(85289): 1.5e-51
Smith-Waterman score: 2404; 100.0% identity (100.0% similar) in 345 aa overlap (1-345:1-345)
10 20 30 40 50 60
pF1KB3 MLMFDPVPVKQEAMDPVSVSYPSNYMESMKPNKYGVIYSTPLPEKFFQTPEGLSHGIQME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MLMFDPVPVKQEAMDPVSVSYPSNYMESMKPNKYGVIYSTPLPEKFFQTPEGLSHGIQME
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 PVDLTVNKRSSPPSAGNSPSSLKFPSSHRRASPGLSMPSSSPPIKKYSPPSPGVQPFGVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 PVDLTVNKRSSPPSAGNSPSSLKFPSSHRRASPGLSMPSSSPPIKKYSPPSPGVQPFGVP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 LSMPPVMAAALSRHGIRSPGILPVIQPVVVQPVPFMYTSHLQQPLMVSLSEEMENSSSSM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 LSMPPVMAAALSRHGIRSPGILPVIQPVVVQPVPFMYTSHLQQPLMVSLSEEMENSSSSM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 QVPVIESYEKPISQKKIKIEPGIEPQRTDYYPEEMSPPLMNSVSPPQALLQENHPSVIVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 QVPVIESYEKPISQKKIKIEPGIEPQRTDYYPEEMSPPLMNSVSPPQALLQENHPSVIVQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 PGKRPLPVESPDTQRKRRIHRCDYDGCNKVYTKSSHLKAHRRTHTGEKPYKCTWEGCTWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 PGKRPLPVESPDTQRKRRIHRCDYDGCNKVYTKSSHLKAHRRTHTGEKPYKCTWEGCTWK
250 260 270 280 290 300
310 320 330 340
pF1KB3 FARSDELTRHFRKHTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV
:::::::::::::::::::::::::::::::::::::::::::::
NP_057 FARSDELTRHFRKHTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV
310 320 330 340
>>XP_016863768 (OMIM: 609392) PREDICTED: Krueppel-like f (320 aa)
initn: 2232 init1: 2232 opt: 2232 Z-score: 974.0 bits: 188.6 E(85289): 1.6e-47
Smith-Waterman score: 2232; 100.0% identity (100.0% similar) in 320 aa overlap (26-345:1-320)
10 20 30 40 50 60
pF1KB3 MLMFDPVPVKQEAMDPVSVSYPSNYMESMKPNKYGVIYSTPLPEKFFQTPEGLSHGIQME
:::::::::::::::::::::::::::::::::::
XP_016 MESMKPNKYGVIYSTPLPEKFFQTPEGLSHGIQME
10 20 30
70 80 90 100 110 120
pF1KB3 PVDLTVNKRSSPPSAGNSPSSLKFPSSHRRASPGLSMPSSSPPIKKYSPPSPGVQPFGVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PVDLTVNKRSSPPSAGNSPSSLKFPSSHRRASPGLSMPSSSPPIKKYSPPSPGVQPFGVP
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB3 LSMPPVMAAALSRHGIRSPGILPVIQPVVVQPVPFMYTSHLQQPLMVSLSEEMENSSSSM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LSMPPVMAAALSRHGIRSPGILPVIQPVVVQPVPFMYTSHLQQPLMVSLSEEMENSSSSM
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB3 QVPVIESYEKPISQKKIKIEPGIEPQRTDYYPEEMSPPLMNSVSPPQALLQENHPSVIVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QVPVIESYEKPISQKKIKIEPGIEPQRTDYYPEEMSPPLMNSVSPPQALLQENHPSVIVQ
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB3 PGKRPLPVESPDTQRKRRIHRCDYDGCNKVYTKSSHLKAHRRTHTGEKPYKCTWEGCTWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PGKRPLPVESPDTQRKRRIHRCDYDGCNKVYTKSSHLKAHRRTHTGEKPYKCTWEGCTWK
220 230 240 250 260 270
310 320 330 340
pF1KB3 FARSDELTRHFRKHTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV
:::::::::::::::::::::::::::::::::::::::::::::
XP_016 FARSDELTRHFRKHTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV
280 290 300 310 320
>>XP_016875874 (OMIM: 607531) PREDICTED: Krueppel-like f (352 aa)
initn: 786 init1: 645 opt: 668 Z-score: 313.0 bits: 66.4 E(85289): 1.1e-10
Smith-Waterman score: 776; 43.8% identity (65.5% similar) in 336 aa overlap (58-345:28-352)
30 40 50 60 70 80
pF1KB3 SMKPNKYGVIYSTPLPEKFFQTPEGLSHGIQMEPVDLTVNK-RSSPPSAGNSPSSL----
: :::::..:: :.:: ....:: :.
XP_016 MEAVPLLLNNVKGEPPEDSLSVDHFQTQTEPVDLSINKARTSPTAVSSSPVSMTASA
10 20 30 40 50
90 100 110 120 130 140
pF1KB3 KFPSSHRRASPGLSMPSSSPP-IKKYSPPSPGVQPFGVPLSMPPVMAAALSRHGIRSPGI
. ::: .: . : .::: : . : : . .. :. :..:.: :. . .
XP_016 SSPSSTSTSSSSSSRLASSPTVITSVSSASSS----STVLTPGPLVASA---SGVGGQQF
60 70 80 90 100 110
150 160 170 180 190
pF1KB3 LPVIQPVV-VQPVPFMYT--SHLQQ--------PLMVSLSEEMENSSSSMQVPVIESYEK
: .:.:: .:. .. . ::... :.. . . : .... ::..:. .
XP_016 LHIIHPVPPSSPMNLQSNKLSHVHRIPVVVQSVPVVYTAVRSPGNVNNTIVVPLLEDGR-
120 130 140 150 160
200 210 220 230 240
pF1KB3 PISQKKIKIEP-GIEPQ--RTDYYPEEMSPPLMNSVSPP--QAL-----LQENHPSVIVQ
.. : ...: :. :. ..: ... ..::. :: .:: ::: . .
XP_016 --GHGKAQMDPRGLSPRQSKSDSDDDDLPNVTLDSVNETGSTALSIARAVQEVHPSPVSR
170 180 190 200 210 220
250 260 270
pF1KB3 P-GKR-----------PLPVES---------PDTQRKRRIHRCDYDGCNKVYTKSSHLKA
:.: :. .:: ::. :::::::::..::::::::::::::
XP_016 VRGNRMNNQKFPCSISPFSIESTRRQRRSESPDS-RKRRIHRCDFEGCNKVYTKSSHLKA
230 240 250 260 270 280
280 290 300 310 320 330
pF1KB3 HRRTHTGEKPYKCTWEGCTWKFARSDELTRHFRKHTGIKPFQCPDCDRSFSRSDHLALHR
:::::::::::::::::::::::::::::::.:::::.:::.: ::::::::::::::::
XP_016 HRRTHTGEKPYKCTWEGCTWKFARSDELTRHYRKHTGVKPFKCADCDRSFSRSDHLALHR
290 300 310 320 330 340
340
pF1KB3 KRHMLV
.:::::
XP_016 RRHMLV
350
>>XP_011533213 (OMIM: 607531) PREDICTED: Krueppel-like f (383 aa)
initn: 786 init1: 645 opt: 668 Z-score: 312.6 bits: 66.4 E(85289): 1.1e-10
Smith-Waterman score: 779; 40.8% identity (63.6% similar) in 385 aa overlap (9-345:17-383)
10 20 30 40 50
pF1KB3 MLMFDPVPVKQEAMDPVSVSYPSNYMESMKPNKYGVIYSTPLPEKFFQTPEG
...: .: .::. ::.. : . . . : :: ... .
XP_011 MLMLDGMPAVRVKTELLESEQGSPNVHNYPD--MEAV-PLLLNNVKGEP-PEDSLSVDH-
10 20 30 40 50
60 70 80 90 100
pF1KB3 LSHGIQMEPVDLTVNK-RSSPPSAGNSPSSL----KFPSSHRRASPGLSMPSSSPP-IKK
: :::::..:: :.:: ....:: :. . ::: .: . : .::: : .
XP_011 --FQTQTEPVDLSINKARTSPTAVSSSPVSMTASASSPSSTSTSSSSSSRLASSPTVITS
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB3 YSPPSPGVQPFGVPLSMPPVMAAALSRHGIRSPGILPVIQPVV-VQPVPFMYT--SHLQQ
: : . .. :. :..:.: :. . .: .:.:: .:. .. . ::...
XP_011 VSSASSS----STVLTPGPLVASA---SGVGGQQFLHIIHPVPPSSPMNLQSNKLSHVHR
120 130 140 150 160
170 180 190 200 210
pF1KB3 --------PLMVSLSEEMENSSSSMQVPVIESYEKPISQKKIKIEP-GIEPQ--RTDYYP
:.. . . : .... ::..:. . .. : ...: :. :. ..:
XP_011 IPVVVQSVPVVYTAVRSPGNVNNTIVVPLLEDGR---GHGKAQMDPRGLSPRQSKSDSDD
170 180 190 200 210 220
220 230 240 250
pF1KB3 EEMSPPLMNSVSPP--QAL-----LQENHPSVIVQP-GKR-----------PLPVES---
... ..::. :: .:: ::: . . :.: :. .::
XP_011 DDLPNVTLDSVNETGSTALSIARAVQEVHPSPVSRVRGNRMNNQKFPCSISPFSIESTRR
230 240 250 260 270 280
260 270 280 290 300
pF1KB3 ------PDTQRKRRIHRCDYDGCNKVYTKSSHLKAHRRTHTGEKPYKCTWEGCTWKFARS
::. :::::::::..:::::::::::::::::::::::::::::::::::::::
XP_011 QRRSESPDS-RKRRIHRCDFEGCNKVYTKSSHLKAHRRTHTGEKPYKCTWEGCTWKFARS
290 300 310 320 330 340
310 320 330 340
pF1KB3 DELTRHFRKHTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV
::::::.:::::.:::.: ::::::::::::::::.:::::
XP_011 DELTRHYRKHTGVKPFKCADCDRSFSRSDHLALHRRRHMLV
350 360 370 380
>>XP_011533214 (OMIM: 607531) PREDICTED: Krueppel-like f (383 aa)
initn: 786 init1: 645 opt: 668 Z-score: 312.6 bits: 66.4 E(85289): 1.1e-10
Smith-Waterman score: 779; 40.8% identity (63.6% similar) in 385 aa overlap (9-345:17-383)
10 20 30 40 50
pF1KB3 MLMFDPVPVKQEAMDPVSVSYPSNYMESMKPNKYGVIYSTPLPEKFFQTPEG
...: .: .::. ::.. : . . . : :: ... .
XP_011 MLMLDGMPAVRVKTELLESEQGSPNVHNYPD--MEAV-PLLLNNVKGEP-PEDSLSVDH-
10 20 30 40 50
60 70 80 90 100
pF1KB3 LSHGIQMEPVDLTVNK-RSSPPSAGNSPSSL----KFPSSHRRASPGLSMPSSSPP-IKK
: :::::..:: :.:: ....:: :. . ::: .: . : .::: : .
XP_011 --FQTQTEPVDLSINKARTSPTAVSSSPVSMTASASSPSSTSTSSSSSSRLASSPTVITS
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB3 YSPPSPGVQPFGVPLSMPPVMAAALSRHGIRSPGILPVIQPVV-VQPVPFMYT--SHLQQ
: : . .. :. :..:.: :. . .: .:.:: .:. .. . ::...
XP_011 VSSASSS----STVLTPGPLVASA---SGVGGQQFLHIIHPVPPSSPMNLQSNKLSHVHR
120 130 140 150 160
170 180 190 200 210
pF1KB3 --------PLMVSLSEEMENSSSSMQVPVIESYEKPISQKKIKIEP-GIEPQ--RTDYYP
:.. . . : .... ::..:. . .. : ...: :. :. ..:
XP_011 IPVVVQSVPVVYTAVRSPGNVNNTIVVPLLEDGR---GHGKAQMDPRGLSPRQSKSDSDD
170 180 190 200 210 220
220 230 240 250
pF1KB3 EEMSPPLMNSVSPP--QAL-----LQENHPSVIVQP-GKR-----------PLPVES---
... ..::. :: .:: ::: . . :.: :. .::
XP_011 DDLPNVTLDSVNETGSTALSIARAVQEVHPSPVSRVRGNRMNNQKFPCSISPFSIESTRR
230 240 250 260 270 280
260 270 280 290 300
pF1KB3 ------PDTQRKRRIHRCDYDGCNKVYTKSSHLKAHRRTHTGEKPYKCTWEGCTWKFARS
::. :::::::::..:::::::::::::::::::::::::::::::::::::::
XP_011 QRRSESPDS-RKRRIHRCDFEGCNKVYTKSSHLKAHRRTHTGEKPYKCTWEGCTWKFARS
290 300 310 320 330 340
310 320 330 340
pF1KB3 DELTRHFRKHTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV
::::::.:::::.:::.: ::::::::::::::::.:::::
XP_011 DELTRHYRKHTGVKPFKCADCDRSFSRSDHLALHRRRHMLV
350 360 370 380
>>XP_016875873 (OMIM: 607531) PREDICTED: Krueppel-like f (393 aa)
initn: 786 init1: 645 opt: 668 Z-score: 312.5 bits: 66.4 E(85289): 1.2e-10
Smith-Waterman score: 779; 40.8% identity (63.6% similar) in 385 aa overlap (9-345:27-393)
10 20 30 40
pF1KB3 MLMFDPVPVKQEAMDPVSVSYPSNYMESMKPNKYGVIYSTPL
...: .: .::. ::.. : . . . :
XP_016 MVNINTFENRMLMLDGMPAVRVKTELLESEQGSPNVHNYPD--MEAV-PLLLNNVKGEP-
10 20 30 40 50
50 60 70 80 90
pF1KB3 PEKFFQTPEGLSHGIQMEPVDLTVNK-RSSPPSAGNSPSSL----KFPSSHRRASPGLSM
:: ... . : :::::..:: :.:: ....:: :. . ::: .: . :
XP_016 PEDSLSVDH---FQTQTEPVDLSINKARTSPTAVSSSPVSMTASASSPSSTSTSSSSSSR
60 70 80 90 100 110
100 110 120 130 140 150
pF1KB3 PSSSPP-IKKYSPPSPGVQPFGVPLSMPPVMAAALSRHGIRSPGILPVIQPVV-VQPVPF
.::: : . : : . .. :. :..:.: :. . .: .:.:: .:. .
XP_016 LASSPTVITSVSSASSS----STVLTPGPLVASA---SGVGGQQFLHIIHPVPPSSPMNL
120 130 140 150 160
160 170 180 190 200
pF1KB3 MYT--SHLQQ--------PLMVSLSEEMENSSSSMQVPVIESYEKPISQKKIKIEP-GIE
. . ::... :.. . . : .... ::..:. . .. : ...: :.
XP_016 QSNKLSHVHRIPVVVQSVPVVYTAVRSPGNVNNTIVVPLLEDGR---GHGKAQMDPRGLS
170 180 190 200 210 220
210 220 230 240
pF1KB3 PQ--RTDYYPEEMSPPLMNSVSPP--QAL-----LQENHPSVIVQP-GKR----------
:. ..: ... ..::. :: .:: ::: . . :.:
XP_016 PRQSKSDSDDDDLPNVTLDSVNETGSTALSIARAVQEVHPSPVSRVRGNRMNNQKFPCSI
230 240 250 260 270 280
250 260 270 280 290
pF1KB3 -PLPVES---------PDTQRKRRIHRCDYDGCNKVYTKSSHLKAHRRTHTGEKPYKCTW
:. .:: ::. :::::::::..:::::::::::::::::::::::::::::
XP_016 SPFSIESTRRQRRSESPDS-RKRRIHRCDFEGCNKVYTKSSHLKAHRRTHTGEKPYKCTW
290 300 310 320 330 340
300 310 320 330 340
pF1KB3 EGCTWKFARSDELTRHFRKHTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV
::::::::::::::::.:::::.:::.: ::::::::::::::::.:::::
XP_016 EGCTWKFARSDELTRHYRKHTGVKPFKCADCDRSFSRSDHLALHRRRHMLV
350 360 370 380 390
>>XP_011533212 (OMIM: 607531) PREDICTED: Krueppel-like f (400 aa)
initn: 786 init1: 645 opt: 668 Z-score: 312.4 bits: 66.5 E(85289): 1.2e-10
Smith-Waterman score: 779; 40.8% identity (63.6% similar) in 385 aa overlap (9-345:34-400)
10 20 30
pF1KB3 MLMFDPVPVKQEAMDPVSVSYPSNYMESMKPNKYGVIY
...: .: .::. ::.. : . .
XP_011 VQACGTNINTFENRMLMLDGMPAVRVKTELLESEQGSPNVHNYPD--MEAV-PLLLNNVK
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB3 STPLPEKFFQTPEGLSHGIQMEPVDLTVNK-RSSPPSAGNSPSSL----KFPSSHRRASP
. : :: ... . : :::::..:: :.:: ....:: :. . ::: .:
XP_011 GEP-PEDSLSVDH---FQTQTEPVDLSINKARTSPTAVSSSPVSMTASASSPSSTSTSSS
70 80 90 100 110
100 110 120 130 140 150
pF1KB3 GLSMPSSSPP-IKKYSPPSPGVQPFGVPLSMPPVMAAALSRHGIRSPGILPVIQPVV-VQ
. : .::: : . : : . .. :. :..:.: :. . .: .:.:: .
XP_011 SSSRLASSPTVITSVSSASSS----STVLTPGPLVASA---SGVGGQQFLHIIHPVPPSS
120 130 140 150 160
160 170 180 190 200
pF1KB3 PVPFMYT--SHLQQ--------PLMVSLSEEMENSSSSMQVPVIESYEKPISQKKIKIEP
:. .. . ::... :.. . . : .... ::..:. . .. : ...:
XP_011 PMNLQSNKLSHVHRIPVVVQSVPVVYTAVRSPGNVNNTIVVPLLEDGR---GHGKAQMDP
170 180 190 200 210 220
210 220 230 240
pF1KB3 -GIEPQ--RTDYYPEEMSPPLMNSVSPP--QAL-----LQENHPSVIVQP-GKR------
:. :. ..: ... ..::. :: .:: ::: . . :.:
XP_011 RGLSPRQSKSDSDDDDLPNVTLDSVNETGSTALSIARAVQEVHPSPVSRVRGNRMNNQKF
230 240 250 260 270 280
250 260 270 280 290
pF1KB3 -----PLPVES---------PDTQRKRRIHRCDYDGCNKVYTKSSHLKAHRRTHTGEKPY
:. .:: ::. :::::::::..:::::::::::::::::::::::::
XP_011 PCSISPFSIESTRRQRRSESPDS-RKRRIHRCDFEGCNKVYTKSSHLKAHRRTHTGEKPY
290 300 310 320 330 340
300 310 320 330 340
pF1KB3 KCTWEGCTWKFARSDELTRHFRKHTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV
::::::::::::::::::::.:::::.:::.: ::::::::::::::::.:::::
XP_011 KCTWEGCTWKFARSDELTRHYRKHTGVKPFKCADCDRSFSRSDHLALHRRRHMLV
350 360 370 380 390 400
>>NP_009180 (OMIM: 607531) Krueppel-like factor 12 [Homo (402 aa)
initn: 786 init1: 645 opt: 668 Z-score: 312.3 bits: 66.5 E(85289): 1.2e-10
Smith-Waterman score: 779; 40.8% identity (63.6% similar) in 385 aa overlap (9-345:36-402)
10 20 30
pF1KB3 MLMFDPVPVKQEAMDPVSVSYPSNYMESMKPNKYGVIY
...: .: .::. ::.. : . .
NP_009 KRKTIKNINTFENRMLMLDGMPAVRVKTELLESEQGSPNVHNYPD--MEAV-PLLLNNVK
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB3 STPLPEKFFQTPEGLSHGIQMEPVDLTVNK-RSSPPSAGNSPSSL----KFPSSHRRASP
. : :: ... . : :::::..:: :.:: ....:: :. . ::: .:
NP_009 GEP-PEDSLSVDH---FQTQTEPVDLSINKARTSPTAVSSSPVSMTASASSPSSTSTSSS
70 80 90 100 110
100 110 120 130 140 150
pF1KB3 GLSMPSSSPP-IKKYSPPSPGVQPFGVPLSMPPVMAAALSRHGIRSPGILPVIQPVV-VQ
. : .::: : . : : . .. :. :..:.: :. . .: .:.:: .
NP_009 SSSRLASSPTVITSVSSASSS----STVLTPGPLVASA---SGVGGQQFLHIIHPVPPSS
120 130 140 150 160 170
160 170 180 190 200
pF1KB3 PVPFMYT--SHLQQ--------PLMVSLSEEMENSSSSMQVPVIESYEKPISQKKIKIEP
:. .. . ::... :.. . . : .... ::..:. . .. : ...:
NP_009 PMNLQSNKLSHVHRIPVVVQSVPVVYTAVRSPGNVNNTIVVPLLEDGR---GHGKAQMDP
180 190 200 210 220
210 220 230 240
pF1KB3 -GIEPQ--RTDYYPEEMSPPLMNSVSPP--QAL-----LQENHPSVIVQP-GKR------
:. :. ..: ... ..::. :: .:: ::: . . :.:
NP_009 RGLSPRQSKSDSDDDDLPNVTLDSVNETGSTALSIARAVQEVHPSPVSRVRGNRMNNQKF
230 240 250 260 270 280
250 260 270 280 290
pF1KB3 -----PLPVES---------PDTQRKRRIHRCDYDGCNKVYTKSSHLKAHRRTHTGEKPY
:. .:: ::. :::::::::..:::::::::::::::::::::::::
NP_009 PCSISPFSIESTRRQRRSESPDS-RKRRIHRCDFEGCNKVYTKSSHLKAHRRTHTGEKPY
290 300 310 320 330 340
300 310 320 330 340
pF1KB3 KCTWEGCTWKFARSDELTRHFRKHTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV
::::::::::::::::::::.:::::.:::.: ::::::::::::::::.:::::
NP_009 KCTWEGCTWKFARSDELTRHYRKHTGVKPFKCADCDRSFSRSDHLALHRRRHMLV
350 360 370 380 390 400
>>XP_011533211 (OMIM: 607531) PREDICTED: Krueppel-like f (402 aa)
initn: 786 init1: 645 opt: 668 Z-score: 312.3 bits: 66.5 E(85289): 1.2e-10
Smith-Waterman score: 779; 40.8% identity (63.6% similar) in 385 aa overlap (9-345:36-402)
10 20 30
pF1KB3 MLMFDPVPVKQEAMDPVSVSYPSNYMESMKPNKYGVIY
...: .: .::. ::.. : . .
XP_011 KRKTIKNINTFENRMLMLDGMPAVRVKTELLESEQGSPNVHNYPD--MEAV-PLLLNNVK
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB3 STPLPEKFFQTPEGLSHGIQMEPVDLTVNK-RSSPPSAGNSPSSL----KFPSSHRRASP
. : :: ... . : :::::..:: :.:: ....:: :. . ::: .:
XP_011 GEP-PEDSLSVDH---FQTQTEPVDLSINKARTSPTAVSSSPVSMTASASSPSSTSTSSS
70 80 90 100 110
100 110 120 130 140 150
pF1KB3 GLSMPSSSPP-IKKYSPPSPGVQPFGVPLSMPPVMAAALSRHGIRSPGILPVIQPVV-VQ
. : .::: : . : : . .. :. :..:.: :. . .: .:.:: .
XP_011 SSSRLASSPTVITSVSSASSS----STVLTPGPLVASA---SGVGGQQFLHIIHPVPPSS
120 130 140 150 160 170
160 170 180 190 200
pF1KB3 PVPFMYT--SHLQQ--------PLMVSLSEEMENSSSSMQVPVIESYEKPISQKKIKIEP
:. .. . ::... :.. . . : .... ::..:. . .. : ...:
XP_011 PMNLQSNKLSHVHRIPVVVQSVPVVYTAVRSPGNVNNTIVVPLLEDGR---GHGKAQMDP
180 190 200 210 220
210 220 230 240
pF1KB3 -GIEPQ--RTDYYPEEMSPPLMNSVSPP--QAL-----LQENHPSVIVQP-GKR------
:. :. ..: ... ..::. :: .:: ::: . . :.:
XP_011 RGLSPRQSKSDSDDDDLPNVTLDSVNETGSTALSIARAVQEVHPSPVSRVRGNRMNNQKF
230 240 250 260 270 280
250 260 270 280 290
pF1KB3 -----PLPVES---------PDTQRKRRIHRCDYDGCNKVYTKSSHLKAHRRTHTGEKPY
:. .:: ::. :::::::::..:::::::::::::::::::::::::
XP_011 PCSISPFSIESTRRQRRSESPDS-RKRRIHRCDFEGCNKVYTKSSHLKAHRRTHTGEKPY
290 300 310 320 330 340
300 310 320 330 340
pF1KB3 KCTWEGCTWKFARSDELTRHFRKHTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV
::::::::::::::::::::.:::::.:::.: ::::::::::::::::.:::::
XP_011 KCTWEGCTWKFARSDELTRHYRKHTGVKPFKCADCDRSFSRSDHLALHRRRHMLV
350 360 370 380 390 400
>>XP_005266308 (OMIM: 607531) PREDICTED: Krueppel-like f (402 aa)
initn: 786 init1: 645 opt: 668 Z-score: 312.3 bits: 66.5 E(85289): 1.2e-10
Smith-Waterman score: 779; 40.8% identity (63.6% similar) in 385 aa overlap (9-345:36-402)
10 20 30
pF1KB3 MLMFDPVPVKQEAMDPVSVSYPSNYMESMKPNKYGVIY
...: .: .::. ::.. : . .
XP_005 KRKTIKNINTFENRMLMLDGMPAVRVKTELLESEQGSPNVHNYPD--MEAV-PLLLNNVK
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB3 STPLPEKFFQTPEGLSHGIQMEPVDLTVNK-RSSPPSAGNSPSSL----KFPSSHRRASP
. : :: ... . : :::::..:: :.:: ....:: :. . ::: .:
XP_005 GEP-PEDSLSVDH---FQTQTEPVDLSINKARTSPTAVSSSPVSMTASASSPSSTSTSSS
70 80 90 100 110
100 110 120 130 140 150
pF1KB3 GLSMPSSSPP-IKKYSPPSPGVQPFGVPLSMPPVMAAALSRHGIRSPGILPVIQPVV-VQ
. : .::: : . : : . .. :. :..:.: :. . .: .:.:: .
XP_005 SSSRLASSPTVITSVSSASSS----STVLTPGPLVASA---SGVGGQQFLHIIHPVPPSS
120 130 140 150 160 170
160 170 180 190 200
pF1KB3 PVPFMYT--SHLQQ--------PLMVSLSEEMENSSSSMQVPVIESYEKPISQKKIKIEP
:. .. . ::... :.. . . : .... ::..:. . .. : ...:
XP_005 PMNLQSNKLSHVHRIPVVVQSVPVVYTAVRSPGNVNNTIVVPLLEDGR---GHGKAQMDP
180 190 200 210 220
210 220 230 240
pF1KB3 -GIEPQ--RTDYYPEEMSPPLMNSVSPP--QAL-----LQENHPSVIVQP-GKR------
:. :. ..: ... ..::. :: .:: ::: . . :.:
XP_005 RGLSPRQSKSDSDDDDLPNVTLDSVNETGSTALSIARAVQEVHPSPVSRVRGNRMNNQKF
230 240 250 260 270 280
250 260 270 280 290
pF1KB3 -----PLPVES---------PDTQRKRRIHRCDYDGCNKVYTKSSHLKAHRRTHTGEKPY
:. .:: ::. :::::::::..:::::::::::::::::::::::::
XP_005 PCSISPFSIESTRRQRRSESPDS-RKRRIHRCDFEGCNKVYTKSSHLKAHRRTHTGEKPY
290 300 310 320 330 340
300 310 320 330 340
pF1KB3 KCTWEGCTWKFARSDELTRHFRKHTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV
::::::::::::::::::::.:::::.:::.: ::::::::::::::::.:::::
XP_005 KCTWEGCTWKFARSDELTRHYRKHTGVKPFKCADCDRSFSRSDHLALHRRRHMLV
350 360 370 380 390 400
345 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 13:19:21 2016 done: Thu Nov 3 13:19:23 2016
Total Scan time: 9.580 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]