Result of FASTA (ccds) for
pF1KB3480
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3480, 316 aa
1>>>pF1KB3480 316 - 316 aa - 316 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7860+/-0.000854; mu= 14.1100+/- 0.051
mean_var=107.0699+/-21.959, 0's: 0 Z-trim(108.8): 76 B-trim: 2 in 1/51
Lambda= 0.123948
statistics sampled from 10357 (10434) to 10357 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.693), E-opt: 0.2 (0.321), width: 16
Scan time: 2.290
The best scores are: opt bits E(32554)
CCDS30922.1 FCGR2A gene_id:2212|Hs108|chr1 ( 316) 2117 389.2 2.3e-108
CCDS44264.1 FCGR2A gene_id:2212|Hs108|chr1 ( 317) 2105 387.0 1e-107
CCDS30925.1 FCGR2B gene_id:2213|Hs108|chr1 ( 291) 1361 253.9 1.1e-67
CCDS30924.1 FCGR2B gene_id:2213|Hs108|chr1 ( 310) 1336 249.5 2.5e-66
CCDS53414.1 FCGR2B gene_id:2213|Hs108|chr1 ( 303) 1329 248.2 5.8e-66
CCDS58040.1 FCGR3B gene_id:2215|Hs108|chr1 ( 269) 633 123.7 1.6e-28
CCDS41433.1 FCGR3B gene_id:2215|Hs108|chr1 ( 233) 626 122.4 3.4e-28
CCDS1232.1 FCGR3A gene_id:2214|Hs108|chr1 ( 290) 617 120.9 1.2e-27
CCDS44266.1 FCGR3A gene_id:2214|Hs108|chr1 ( 254) 610 119.6 2.6e-27
CCDS72961.1 FCGR3B gene_id:2215|Hs108|chr1 ( 216) 595 116.8 1.5e-26
CCDS933.1 FCGR1A gene_id:2209|Hs108|chr1 ( 374) 565 111.7 9.1e-25
CCDS72845.1 FCGR1B gene_id:2210|Hs108|chr1 ( 280) 558 110.3 1.8e-24
CCDS72844.1 FCGR1B gene_id:2210|Hs108|chr1 ( 224) 548 108.5 5.2e-24
CCDS1184.1 FCER1A gene_id:2205|Hs108|chr1 ( 257) 456 92.1 5.1e-19
CCDS72963.1 FCRLB gene_id:127943|Hs108|chr1 ( 318) 425 86.6 2.8e-17
CCDS72962.1 FCRLB gene_id:127943|Hs108|chr1 ( 275) 421 85.8 4.1e-17
CCDS30927.1 FCRLB gene_id:127943|Hs108|chr1 ( 426) 421 86.0 5.6e-17
CCDS72965.1 FCRLB gene_id:127943|Hs108|chr1 ( 311) 407 83.4 2.5e-16
CCDS72964.1 FCRLB gene_id:127943|Hs108|chr1 ( 268) 403 82.6 3.8e-16
CCDS1165.1 FCRL5 gene_id:83416|Hs108|chr1 ( 977) 349 73.5 7.7e-13
CCDS72960.1 FCGR3B gene_id:2215|Hs108|chr1 ( 130) 324 68.2 4e-12
CCDS1167.1 FCRL3 gene_id:115352|Hs108|chr1 ( 734) 319 68.0 2.6e-11
CCDS81385.1 FCRL3 gene_id:115352|Hs108|chr1 ( 742) 319 68.0 2.6e-11
CCDS1166.1 FCRL4 gene_id:83417|Hs108|chr1 ( 515) 309 66.1 6.9e-11
>>CCDS30922.1 FCGR2A gene_id:2212|Hs108|chr1 (316 aa)
initn: 2117 init1: 2117 opt: 2117 Z-score: 2059.0 bits: 389.2 E(32554): 2.3e-108
Smith-Waterman score: 2117; 99.7% identity (100.0% similar) in 316 aa overlap (1-316:1-316)
10 20 30 40 50 60
pF1KB3 MTMETQMSQNVCPRNLWLLQPLTVLLLLASADSQAAPPKAVLKLEPPWINVLQEDSVTLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MTMETQMSQNVCPRNLWLLQPLTVLLLLASADSQAAPPKAVLKLEPPWINVLQEDSVTLT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 CQGARSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSLSDPVHLTVLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 CQGARSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSLSDPVHLTVLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 EWLVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSRLDPTFSIPQANHSH
:::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::
CCDS30 EWLVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSHLDPTFSIPQANHSH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 SGDYHCTGNIGYTLFSSKPVTITVQVPSMGSSSPMGIIVAVVIATAVAAIVAAVVALIYC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 SGDYHCTGNIGYTLFSSKPVTITVQVPSMGSSSPMGIIVAVVIATAVAAIVAAVVALIYC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 RKKRISANSTDPVKAAQFEPPGRQMIAIRKRQLEETNNDYETADGGYMTLNPRAPTDDDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 RKKRISANSTDPVKAAQFEPPGRQMIAIRKRQLEETNNDYETADGGYMTLNPRAPTDDDK
250 260 270 280 290 300
310
pF1KB3 NIYLTLPPNDHVNSNN
::::::::::::::::
CCDS30 NIYLTLPPNDHVNSNN
310
>>CCDS44264.1 FCGR2A gene_id:2212|Hs108|chr1 (317 aa)
initn: 1908 init1: 1908 opt: 2105 Z-score: 2047.3 bits: 387.0 E(32554): 1e-107
Smith-Waterman score: 2105; 99.4% identity (99.7% similar) in 317 aa overlap (1-316:1-317)
10 20 30 40 50
pF1KB3 MTMETQMSQNVCPRNLWLLQPLTVLLLLASADSQAA-PPKAVLKLEPPWINVLQEDSVTL
:::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
CCDS44 MTMETQMSQNVCPRNLWLLQPLTVLLLLASADSQAAAPPKAVLKLEPPWINVLQEDSVTL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB3 TCQGARSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSLSDPVHLTVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 TCQGARSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSLSDPVHLTVL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB3 SEWLVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSRLDPTFSIPQANHS
::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::
CCDS44 SEWLVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSHLDPTFSIPQANHS
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB3 HSGDYHCTGNIGYTLFSSKPVTITVQVPSMGSSSPMGIIVAVVIATAVAAIVAAVVALIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 HSGDYHCTGNIGYTLFSSKPVTITVQVPSMGSSSPMGIIVAVVIATAVAAIVAAVVALIY
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB3 CRKKRISANSTDPVKAAQFEPPGRQMIAIRKRQLEETNNDYETADGGYMTLNPRAPTDDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 CRKKRISANSTDPVKAAQFEPPGRQMIAIRKRQLEETNNDYETADGGYMTLNPRAPTDDD
250 260 270 280 290 300
300 310
pF1KB3 KNIYLTLPPNDHVNSNN
:::::::::::::::::
CCDS44 KNIYLTLPPNDHVNSNN
310
>>CCDS30925.1 FCGR2B gene_id:2213|Hs108|chr1 (291 aa)
initn: 1399 init1: 1159 opt: 1361 Z-score: 1328.8 bits: 253.9 E(32554): 1.1e-67
Smith-Waterman score: 1361; 81.3% identity (89.9% similar) in 257 aa overlap (1-255:10-262)
10 20 30 40
pF1KB3 MTMETQMSQNVCPRNLW--LLQPLTVLLLLASADSQAAPPKAVLKLEPPWI
.. :.. .. :. : .: .::.: : . :::::::::::: ::
CCDS30 MGILSFLPVLATESDWADCKSPQP-WGHMLLWTAVLFLAPVAGTPAAPPKAVLKLEPQWI
10 20 30 40 50
50 60 70 80 90 100
pF1KB3 NVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTS
::::::::::::.:..::::::::::::::::::::::::::::::::::::::::::::
CCDS30 NVLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTS
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB3 LSDPVHLTVLSEWLVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSRLDP
:::::::::::::::::::::::::::::.::::::::::::::::::::::.:::: ::
CCDS30 LSDPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDP
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB3 TFSIPQANHSHSGDYHCTGNIGYTLFSSKPVTITVQVPSMGSSSPMGIIVAVVIATAVAA
.::::::::::::::::::::::::.::::::::::.:: ::::::::::: . ::::
CCDS30 NFSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAPS---SSPMGIIVAVVTGIAVAA
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB3 IVAAVVALIYCRKKRISANSTDPVKAAQFEPPGRQMIAIRKRQLEETNNDYETADGGYMT
::::::::::::::::::: :.: .:
CCDS30 IVAAVVALIYCRKKRISANPTNPDEADKVGAENTITYSLLMHPDALEEPDDQNRI
240 250 260 270 280 290
>>CCDS30924.1 FCGR2B gene_id:2213|Hs108|chr1 (310 aa)
initn: 1217 init1: 1159 opt: 1336 Z-score: 1304.3 bits: 249.5 E(32554): 2.5e-66
Smith-Waterman score: 1336; 82.3% identity (90.4% similar) in 249 aa overlap (1-247:10-254)
10 20 30 40
pF1KB3 MTMETQMSQNVCPRNLW--LLQPLTVLLLLASADSQAAPPKAVLKLEPPWI
.. :.. .. :. : .: .::.: : . :::::::::::: ::
CCDS30 MGILSFLPVLATESDWADCKSPQP-WGHMLLWTAVLFLAPVAGTPAAPPKAVLKLEPQWI
10 20 30 40 50
50 60 70 80 90 100
pF1KB3 NVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTS
::::::::::::.:..::::::::::::::::::::::::::::::::::::::::::::
CCDS30 NVLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTS
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB3 LSDPVHLTVLSEWLVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSRLDP
:::::::::::::::::::::::::::::.::::::::::::::::::::::.:::: ::
CCDS30 LSDPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDP
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB3 TFSIPQANHSHSGDYHCTGNIGYTLFSSKPVTITVQVPSMGSSSPMGIIVAVVIATAVAA
.::::::::::::::::::::::::.::::::::::.:: ::::::::::: . ::::
CCDS30 NFSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAPS---SSPMGIIVAVVTGIAVAA
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB3 IVAAVVALIYCRKKRISANSTDPVKAAQFEPPGRQMIAIRKRQLEETNNDYETADGGYMT
::::::::::::::::::
CCDS30 IVAAVVALIYCRKKRISALPGYPECREMGETLPEKPANPTNPDEADKVGAENTITYSLLM
240 250 260 270 280 290
>>CCDS53414.1 FCGR2B gene_id:2213|Hs108|chr1 (303 aa)
initn: 1213 init1: 1155 opt: 1329 Z-score: 1297.7 bits: 248.2 E(32554): 5.8e-66
Smith-Waterman score: 1329; 88.2% identity (93.9% similar) in 228 aa overlap (20-247:23-247)
10 20 30 40 50
pF1KB3 MTMETQMSQNVCPRNLWLLQPLTVLLLLASADSQAAPPKAVLKLEPPWINVLQEDSV
:: .:: ... :::::::::::: ::::::::::
CCDS53 MGILSFLPVLATESDWADCKSPQPWGHMLLWTAVLFLAAPPKAVLKLEPQWINVLQEDSV
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB3 TLTCQGARSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSLSDPVHLT
::::.:..::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 TLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSLSDPVHLT
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB3 VLSEWLVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSRLDPTFSIPQAN
:::::::::::::::::::::.::::::::::::::::::::::.:::: ::.:::::::
CCDS53 VLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPNFSIPQAN
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB3 HSHSGDYHCTGNIGYTLFSSKPVTITVQVPSMGSSSPMGIIVAVVIATAVAAIVAAVVAL
:::::::::::::::::.::::::::::.:: ::::::::::: . ::::::::::::
CCDS53 HSHSGDYHCTGNIGYTLYSSKPVTITVQAPS---SSPMGIIVAVVTGIAVAAIVAAVVAL
190 200 210 220 230
240 250 260 270 280 290
pF1KB3 IYCRKKRISANSTDPVKAAQFEPPGRQMIAIRKRQLEETNNDYETADGGYMTLNPRAPTD
::::::::::
CCDS53 IYCRKKRISALPGYPECREMGETLPEKPANPTNPDEADKVGAENTITYSLLMHPDALEEP
240 250 260 270 280 290
>>CCDS58040.1 FCGR3B gene_id:2215|Hs108|chr1 (269 aa)
initn: 709 init1: 604 opt: 633 Z-score: 625.7 bits: 123.7 E(32554): 1.6e-28
Smith-Waterman score: 633; 44.6% identity (68.3% similar) in 249 aa overlap (6-245:24-269)
10 20 30
pF1KB3 MTMETQMSQNVCPRN---LW-LLQPLTVLLLLASADSQAAP-
..: .:: . .: :: : :.::::.:: ..
CCDS58 MGGGTGERLFTPSCLVGLVPLGLRISLVTCPLQCGIMWQLLLP-TALLLLVSAGMRTEDL
10 20 30 40 50
40 50 60 70 80 90
pF1KB3 PKAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQPSYRFKANNND
::::. ::: : .::..::::: :::: :::..: ::::: ::: .... . :. ::
CCDS58 PKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNENLISSQASSYFIDAATVND
60 70 80 90 100 110
100 110 120 130 140 150
pF1KB3 SGEYTCQTGQTSLSDPVHLTVLSEWLVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQ
:::: :::. ..:::::.: : ::.::.:. :.: . : :::::::. : :::..:
CCDS58 SGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQ
120 130 140 150 160 170
160 170 180 190 200 210
pF1KB3 NGKSQKFSRLDPTFSIPQANHSHSGDYHCTGNIGYTLFSSKPVTITVQ----VPSMGSSS
:::..:. . . : ::.:. . ::.: : : .: ::. :.::. : ...: :
CCDS58 NGKDRKYFHHNSDFHIPKATLKDSGSYFCRGLVGSKNVSSETVNITITQGLAVSTISSFS
180 190 200 210 220 230
220 230 240 250 260 270
pF1KB3 PMGIIVAVVIATAVAAIVAAVVALIYCRKKRISANSTDPVKAAQFEPPGRQMIAIRKRQL
: : :. .. .. . :. ..: . : :
CCDS58 PPGYQVSFCLVMVL--LFAVDTGLYFSVKTNI
240 250 260
280 290 300 310
pF1KB3 EETNNDYETADGGYMTLNPRAPTDDDKNIYLTLPPNDHVNSNN
>>CCDS41433.1 FCGR3B gene_id:2215|Hs108|chr1 (233 aa)
initn: 709 init1: 604 opt: 626 Z-score: 619.7 bits: 122.4 E(32554): 3.4e-28
Smith-Waterman score: 626; 45.8% identity (69.1% similar) in 236 aa overlap (16-245:1-233)
10 20 30 40 50
pF1KB3 MTMETQMSQNVCPRNLW-LLQPLTVLLLLASADSQAAP-PKAVLKLEPPWINVLQEDSVT
.: :: : :.::::.:: .. ::::. ::: : .::..::::
CCDS41 MWQLLLP-TALLLLVSAGMRTEDLPKAVVFLEPQWYSVLEKDSVT
10 20 30 40
60 70 80 90 100 110
pF1KB3 LTCQGARSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSLSDPVHLTV
: :::: :::..: ::::: ::: .... . :. :::::: :::. ..:::::.: :
CCDS41 LKCQGAYSPEDNSTQWFHNENLISSQASSYFIDAATVNDSGEYRCQTNLSTLSDPVQLEV
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB3 LSEWLVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSRLDPTFSIPQANH
::.::.:. :.: . : :::::::. : :::..::::..:. . . : ::.:.
CCDS41 HIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYFHHNSDFHIPKATL
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB3 SHSGDYHCTGNIGYTLFSSKPVTITVQ----VPSMGSSSPMGIIVAVVIATAVAAIVAAV
. ::.: : : .: ::. :.::. : ...: :: : :. .. .. . :.
CCDS41 KDSGSYFCRGLVGSKNVSSETVNITITQGLAVSTISSFSPPGYQVSFCLVMVL--LFAVD
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB3 VALIYCRKKRISANSTDPVKAAQFEPPGRQMIAIRKRQLEETNNDYETADGGYMTLNPRA
..: . : :
CCDS41 TGLYFSVKTNI
230
>>CCDS1232.1 FCGR3A gene_id:2214|Hs108|chr1 (290 aa)
initn: 691 init1: 586 opt: 617 Z-score: 609.8 bits: 120.9 E(32554): 1.2e-27
Smith-Waterman score: 617; 42.7% identity (67.5% similar) in 255 aa overlap (6-251:24-275)
10 20 30
pF1KB3 MTMETQMSQNVCPRN---LW-LLQPLTVLLLLASADSQAAP-
..: .:: . .: :: : :.::::.:: ..
CCDS12 MGGGAGERLFTSSCLVGLVPLGLRISLVTCPLQCGIMWQLLLP-TALLLLVSAGMRTEDL
10 20 30 40 50
40 50 60 70 80 90
pF1KB3 PKAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQPSYRFKANNND
::::. ::: : ::..::::: :::: :::..: ::::: .:: .... . :. .:
CCDS12 PKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVDD
60 70 80 90 100 110
100 110 120 130 140 150
pF1KB3 SGEYTCQTGQTSLSDPVHLTVLSEWLVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQ
:::: :::. ..:::::.: : ::.::.:. :.: . : :::::::. : :::..:
CCDS12 SGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQ
120 130 140 150 160 170
160 170 180 190 200 210
pF1KB3 NGKSQKFSRLDPTFSIPQANHSHSGDYHCTGNIGYTLFSSKPVTITVQ----VPSMGSSS
:::..:. . . : ::.:. . ::.: : : .: ::. :.::. : ...:
CCDS12 NGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKNVSSETVNITITQGLAVSTISSFF
180 190 200 210 220 230
220 230 240 250 260 270
pF1KB3 PMGIIVAVVIATAVAAIVAAVVALIYCRKKRISANSTDPVKAAQFEPPGRQMIAIRKRQL
: : :. .. .. . :. ..: . : : ... :
CCDS12 PPGYQVSFCLVMVL--LFAVDTGLYFSVKTNIRSSTRDWKDHKFKWRKDPQDK
240 250 260 270 280 290
280 290 300 310
pF1KB3 EETNNDYETADGGYMTLNPRAPTDDDKNIYLTLPPNDHVNSNN
>>CCDS44266.1 FCGR3A gene_id:2214|Hs108|chr1 (254 aa)
initn: 691 init1: 586 opt: 610 Z-score: 603.8 bits: 119.6 E(32554): 2.6e-27
Smith-Waterman score: 610; 43.8% identity (68.2% similar) in 242 aa overlap (16-251:1-239)
10 20 30 40 50
pF1KB3 MTMETQMSQNVCPRNLW-LLQPLTVLLLLASADSQAAP-PKAVLKLEPPWINVLQEDSVT
.: :: : :.::::.:: .. ::::. ::: : ::..::::
CCDS44 MWQLLLP-TALLLLVSAGMRTEDLPKAVVFLEPQWYRVLEKDSVT
10 20 30 40
60 70 80 90 100 110
pF1KB3 LTCQGARSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSLSDPVHLTV
: :::: :::..: ::::: .:: .... . :. .::::: :::. ..:::::.: :
CCDS44 LKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEV
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB3 LSEWLVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSRLDPTFSIPQANH
::.::.:. :.: . : :::::::. : :::..::::..:. . . : ::.:.
CCDS44 HIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATL
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB3 SHSGDYHCTGNIGYTLFSSKPVTITVQ----VPSMGSSSPMGIIVAVVIATAVAAIVAAV
. ::.: : : .: ::. :.::. : ...: : : :. .. .. . :.
CCDS44 KDSGSYFCRGLFGSKNVSSETVNITITQGLAVSTISSFFPPGYQVSFCLVMVL--LFAVD
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB3 VALIYCRKKRISANSTDPVKAAQFEPPGRQMIAIRKRQLEETNNDYETADGGYMTLNPRA
..: . : : ... :
CCDS44 TGLYFSVKTNIRSSTRDWKDHKFKWRKDPQDK
230 240 250
>>CCDS72961.1 FCGR3B gene_id:2215|Hs108|chr1 (216 aa)
initn: 665 init1: 581 opt: 595 Z-score: 590.2 bits: 116.8 E(32554): 1.5e-26
Smith-Waterman score: 595; 45.8% identity (69.3% similar) in 212 aa overlap (38-245:7-216)
10 20 30 40 50 60
pF1KB3 SQNVCPRNLWLLQPLTVLLLLASADSQAAPPKAVLKLEPPWINVLQEDSVTLTCQGARSP
::::. ::: : .::..::::: :::: ::
CCDS72 MRTEDLPKAVVFLEPQWYSVLEKDSVTLKCQGAYSP
10 20 30
70 80 90 100 110 120
pF1KB3 ESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSLSDPVHLTVLSEWLVLQT
:..: ::::: ::: .... . :. :::::: :::. ..:::::.: : ::.::.
CCDS72 EDNSTQWFHNENLISSQASSYFIDAATVNDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQA
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB3 PHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSRLDPTFSIPQANHSHSGDYHCT
:. :.: . : :::::::. : :::..::::..:. . . : ::.:. . ::.: :
CCDS72 PRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYFHHNSDFHIPKATLKDSGSYFCR
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB3 GNIGYTLFSSKPVTITVQ----VPSMGSSSPMGIIVAVVIATAVAAIVAAVVALIYCRKK
: .: ::. :.::. : ...: :: : :. .. .. . :. ..: . :
CCDS72 GLVGSKNVSSETVNITITQGLAVSTISSFSPPGYQVSFCLVMVL--LFAVDTGLYFSVKT
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB3 RISANSTDPVKAAQFEPPGRQMIAIRKRQLEETNNDYETADGGYMTLNPRAPTDDDKNIY
:
CCDS72 NI
316 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 05:09:27 2016 done: Sat Nov 5 05:09:28 2016
Total Scan time: 2.290 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]