Result of FASTA (omim) for
pF1KB3487
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3487, 664 aa
1>>>pF1KB3487 664 - 664 aa - 664 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.9696+/-0.000407; mu= 15.4910+/- 0.025
mean_var=70.4437+/-14.281, 0's: 0 Z-trim(111.1): 36 B-trim: 21 in 1/50
Lambda= 0.152810
statistics sampled from 19626 (19650) to 19626 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.598), E-opt: 0.2 (0.23), width: 16
Scan time: 10.840
The best scores are: opt bits E(85289)
NP_004159 (OMIM: 252011,256000,600857,613642,61416 ( 664) 4485 998.5 0
XP_016865174 (OMIM: 252011,256000,600857,613642,61 ( 785) 4315 961.0 0
XP_011512374 (OMIM: 252011,256000,600857,613642,61 ( 680) 4305 958.8 0
NP_001317687 (OMIM: 252011,256000,600857,613642,61 ( 583) 3501 781.5 0
XP_011512375 (OMIM: 252011,256000,600857,613642,61 ( 599) 3501 781.5 0
NP_001281261 (OMIM: 252011,256000,600857,613642,61 ( 616) 3474 775.6 0
>>NP_004159 (OMIM: 252011,256000,600857,613642,614165) s (664 aa)
initn: 4485 init1: 4485 opt: 4485 Z-score: 5340.5 bits: 998.5 E(85289): 0
Smith-Waterman score: 4485; 99.8% identity (100.0% similar) in 664 aa overlap (1-664:1-664)
10 20 30 40 50 60
pF1KB3 MSGVRGLSRLLSARRLALAKAWPTVLQTGTRGFHFTVDGNKRASAKVSDSISAQYPVVDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MSGVRGLSRLLSARRLALAKAWPTVLQTGTRGFHFTVDGNKRASAKVSDSISAQYPVVDH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 WHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 WHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 GKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 GKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 DGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 DGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 YGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 YGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 KDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 KDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB3 VLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 VLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGDK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB3 VPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 VPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKIS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB3 KLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 KLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVR
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB3 IDEYDYSKPIQGQQKKPFEEHWRKHTLSFVDVGTGKVTLEYRPVIDKTLNEADCATVPPA
::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
NP_004 IDEYDYSKPIQGQQKKPFEEHWRKHTLSYVDVGTGKVTLEYRPVIDKTLNEADCATVPPA
610 620 630 640 650 660
pF1KB3 IRSY
::::
NP_004 IRSY
>>XP_016865174 (OMIM: 252011,256000,600857,613642,614165 (785 aa)
initn: 4315 init1: 4315 opt: 4315 Z-score: 5136.7 bits: 961.0 E(85289): 0
Smith-Waterman score: 4315; 99.5% identity (100.0% similar) in 640 aa overlap (1-640:1-640)
10 20 30 40 50 60
pF1KB3 MSGVRGLSRLLSARRLALAKAWPTVLQTGTRGFHFTVDGNKRASAKVSDSISAQYPVVDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSGVRGLSRLLSARRLALAKAWPTVLQTGTRGFHFTVDGNKRASAKVSDSISAQYPVVDH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 WHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 GKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 DGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 YGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 KDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB3 VLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGDK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB3 VPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKIS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB3 KLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVR
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB3 IDEYDYSKPIQGQQKKPFEEHWRKHTLSFVDVGTGKVTLEYRPVIDKTLNEADCATVPPA
::::::::::::::::::::::::::::.::::::::..:
XP_016 IDEYDYSKPIQGQQKKPFEEHWRKHTLSYVDVGTGKVSVELVLTTAQHPHGPAQACGLAL
610 620 630 640 650 660
pF1KB3 IRSY
XP_016 LMVNGEEQARFKSTPDRFEAPLKKALRQQSGFGLETESSSCRWFRGALRKGCSVVCARWT
670 680 690 700 710 720
>>XP_011512374 (OMIM: 252011,256000,600857,613642,614165 (680 aa)
initn: 4305 init1: 4305 opt: 4305 Z-score: 5125.8 bits: 958.8 E(85289): 0
Smith-Waterman score: 4305; 99.7% identity (99.8% similar) in 638 aa overlap (1-638:1-638)
10 20 30 40 50 60
pF1KB3 MSGVRGLSRLLSARRLALAKAWPTVLQTGTRGFHFTVDGNKRASAKVSDSISAQYPVVDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSGVRGLSRLLSARRLALAKAWPTVLQTGTRGFHFTVDGNKRASAKVSDSISAQYPVVDH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 WHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 GKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 DGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 YGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 KDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB3 VLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGDK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB3 VPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKIS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB3 KLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVR
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB3 IDEYDYSKPIQGQQKKPFEEHWRKHTLSFVDVGTGKVTLEYRPVIDKTLNEADCATVPPA
::::::::::::::::::::::::::::.::::::: :
XP_011 IDEYDYSKPIQGQQKKPFEEHWRKHTLSYVDVGTGKCTAREQHITHRKQLCSCDGGLSTR
610 620 630 640 650 660
pF1KB3 IRSY
XP_011 KERTIGARSSLNKSESHYAV
670 680
>>NP_001317687 (OMIM: 252011,256000,600857,613642,614165 (583 aa)
initn: 3501 init1: 3501 opt: 3501 Z-score: 4169.0 bits: 781.5 E(85289): 0
Smith-Waterman score: 3777; 87.7% identity (87.8% similar) in 664 aa overlap (1-664:1-583)
10 20 30 40 50 60
pF1KB3 MSGVRGLSRLLSARRLALAKAWPTVLQTGTRGFHFTVDGNKRASAKVSDSISAQYPVVDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSGVRGLSRLLSARRLALAKAWPTVLQTGTRGFHFTVDGNKRASAKVSDSISAQYPVVDH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 WHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 GKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 DGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 YGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 KDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB3 VLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGDK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB3 VPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKIS
:::::::::::::::::::::::::::::::::::::
NP_001 VPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQK-----------------------
490 500 510
550 560 570 580 590 600
pF1KB3 KLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVR
::
NP_001 ----------------------------------------------------------VR
610 620 630 640 650 660
pF1KB3 IDEYDYSKPIQGQQKKPFEEHWRKHTLSFVDVGTGKVTLEYRPVIDKTLNEADCATVPPA
::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
NP_001 IDEYDYSKPIQGQQKKPFEEHWRKHTLSYVDVGTGKVTLEYRPVIDKTLNEADCATVPPA
520 530 540 550 560 570
pF1KB3 IRSY
::::
NP_001 IRSY
580
>>XP_011512375 (OMIM: 252011,256000,600857,613642,614165 (599 aa)
initn: 3761 init1: 3501 opt: 3501 Z-score: 4168.8 bits: 781.5 E(85289): 0
Smith-Waterman score: 3597; 87.0% identity (87.1% similar) in 638 aa overlap (1-638:1-557)
10 20 30 40 50 60
pF1KB3 MSGVRGLSRLLSARRLALAKAWPTVLQTGTRGFHFTVDGNKRASAKVSDSISAQYPVVDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSGVRGLSRLLSARRLALAKAWPTVLQTGTRGFHFTVDGNKRASAKVSDSISAQYPVVDH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 WHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 GKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 DGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 YGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 KDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB3 VLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGDK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB3 VPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKIS
:::::::::::::::::::::::::::::::::::::
XP_011 VPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQK-----------------------
490 500 510
550 560 570 580 590 600
pF1KB3 KLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVR
::
XP_011 ----------------------------------------------------------VR
610 620 630 640 650 660
pF1KB3 IDEYDYSKPIQGQQKKPFEEHWRKHTLSFVDVGTGKVTLEYRPVIDKTLNEADCATVPPA
::::::::::::::::::::::::::::.::::::: :
XP_011 IDEYDYSKPIQGQQKKPFEEHWRKHTLSYVDVGTGKCTAREQHITHRKQLCSCDGGLSTR
520 530 540 550 560 570
pF1KB3 IRSY
XP_011 KERTIGARSSLNKSESHYAV
580 590
>>NP_001281261 (OMIM: 252011,256000,600857,613642,614165 (616 aa)
initn: 3474 init1: 3474 opt: 3474 Z-score: 4136.4 bits: 775.6 E(85289): 0
Smith-Waterman score: 4034; 92.6% identity (92.8% similar) in 664 aa overlap (1-664:1-616)
10 20 30 40 50 60
pF1KB3 MSGVRGLSRLLSARRLALAKAWPTVLQTGTRGFHFTVDGNKRASAKVSDSISAQYPVVDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSGVRGLSRLLSARRLALAKAWPTVLQTGTRGFHFTVDGNKRASAKVSDSISAQYPVVDH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWR
::::::::::::::::::::::::::::::::::::::::::::
NP_001 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQ----------------
70 80 90 100
130 140 150 160 170 180
pF1KB3 WHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKF
::::::::::::::::::::::::::::
NP_001 --------------------------------LENYGMPFSRTEDGKIYQRAFGGQSLKF
110 120 130
190 200 210 220 230 240
pF1KB3 GKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIE
140 150 160 170 180 190
250 260 270 280 290 300
pF1KB3 DGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGI
200 210 220 230 240 250
310 320 330 340 350 360
pF1KB3 YGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPE
260 270 280 290 300 310
370 380 390 400 410 420
pF1KB3 KDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQ
320 330 340 350 360 370
430 440 450 460 470 480
pF1KB3 VLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGDK
380 390 400 410 420 430
490 500 510 520 530 540
pF1KB3 VPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKIS
440 450 460 470 480 490
550 560 570 580 590 600
pF1KB3 KLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVR
500 510 520 530 540 550
610 620 630 640 650 660
pF1KB3 IDEYDYSKPIQGQQKKPFEEHWRKHTLSFVDVGTGKVTLEYRPVIDKTLNEADCATVPPA
::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
NP_001 IDEYDYSKPIQGQQKKPFEEHWRKHTLSYVDVGTGKVTLEYRPVIDKTLNEADCATVPPA
560 570 580 590 600 610
pF1KB3 IRSY
::::
NP_001 IRSY
664 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 07:06:55 2016 done: Sat Nov 5 07:06:57 2016
Total Scan time: 10.840 Total Display time: 0.090
Function used was FASTA [36.3.4 Apr, 2011]