Result of FASTA (ccds) for
pF1KB3505
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3505, 354 aa
1>>>pF1KB3505 354 - 354 aa - 354 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3860+/-0.00119; mu= 15.6970+/- 0.072
mean_var=65.8682+/-13.218, 0's: 0 Z-trim(101.6): 55 B-trim: 264 in 2/48
Lambda= 0.158029
statistics sampled from 6538 (6591) to 6538 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.549), E-opt: 0.2 (0.202), width: 16
Scan time: 2.480
The best scores are: opt bits E(32554)
CCDS5595.1 GNAI1 gene_id:2770|Hs108|chr7 ( 354) 2326 539.6 1.5e-153
CCDS802.1 GNAI3 gene_id:2773|Hs108|chr1 ( 354) 2209 512.9 1.6e-145
CCDS2813.1 GNAI2 gene_id:2771|Hs108|chr3 ( 355) 2077 482.8 1.9e-136
CCDS59061.1 GNAI1 gene_id:2770|Hs108|chr7 ( 302) 2006 466.6 1.2e-131
CCDS54587.1 GNAI2 gene_id:2771|Hs108|chr3 ( 318) 1849 430.8 7.5e-121
CCDS63642.1 GNAI2 gene_id:2771|Hs108|chr3 ( 339) 1849 430.8 7.9e-121
CCDS63644.1 GNAI2 gene_id:2771|Hs108|chr3 ( 303) 1770 412.8 1.9e-115
CCDS10757.1 GNAO1 gene_id:2775|Hs108|chr16 ( 354) 1703 397.5 8.6e-111
CCDS10756.1 GNAO1 gene_id:2775|Hs108|chr16 ( 354) 1691 394.8 5.8e-110
CCDS47625.1 GNAT3 gene_id:346562|Hs108|chr7 ( 354) 1685 393.4 1.5e-109
CCDS803.1 GNAT2 gene_id:2780|Hs108|chr1 ( 354) 1678 391.8 4.5e-109
CCDS2812.1 GNAT1 gene_id:2779|Hs108|chr3 ( 350) 1653 386.1 2.3e-107
CCDS13804.1 GNAZ gene_id:2781|Hs108|chr22 ( 355) 1588 371.3 6.8e-103
CCDS6657.1 GNA14 gene_id:9630|Hs108|chr9 ( 355) 1167 275.3 5.3e-74
CCDS6658.1 GNAQ gene_id:2776|Hs108|chr9 ( 359) 1166 275.1 6.3e-74
CCDS12103.1 GNA11 gene_id:2767|Hs108|chr19 ( 359) 1129 266.7 2.2e-71
CCDS11661.1 GNA13 gene_id:10672|Hs108|chr17 ( 377) 923 219.7 3.1e-57
CCDS5335.1 GNA12 gene_id:2768|Hs108|chr7 ( 381) 912 217.2 1.8e-56
CCDS12104.1 GNA15 gene_id:2769|Hs108|chr19 ( 374) 883 210.6 1.7e-54
CCDS11851.1 GNAL gene_id:2774|Hs108|chr18 ( 458) 828 198.1 1.2e-50
CCDS11852.1 GNAL gene_id:2774|Hs108|chr18 ( 381) 811 194.2 1.5e-49
CCDS42892.1 GNAS gene_id:2778|Hs108|chr20 ( 379) 801 191.9 7.4e-49
CCDS46624.1 GNAS gene_id:2778|Hs108|chr20 ( 380) 799 191.5 1e-48
CCDS64584.1 GNA12 gene_id:2768|Hs108|chr7 ( 322) 746 179.3 3.8e-45
CCDS62302.1 GNA13 gene_id:10672|Hs108|chr17 ( 282) 710 171.1 1e-42
CCDS64583.1 GNA12 gene_id:2768|Hs108|chr7 ( 305) 661 160.0 2.5e-39
CCDS13472.1 GNAS gene_id:2778|Hs108|chr20 ( 394) 637 154.5 1.4e-37
CCDS46623.1 GNAS gene_id:2778|Hs108|chr20 ( 395) 637 154.5 1.4e-37
CCDS46622.1 GNAS gene_id:2778|Hs108|chr20 (1037) 637 154.7 3.1e-37
CCDS58614.1 GNAL gene_id:2774|Hs108|chr18 ( 174) 377 95.1 4.8e-20
>>CCDS5595.1 GNAI1 gene_id:2770|Hs108|chr7 (354 aa)
initn: 2326 init1: 2326 opt: 2326 Z-score: 2870.1 bits: 539.6 E(32554): 1.5e-153
Smith-Waterman score: 2326; 100.0% identity (100.0% similar) in 354 aa overlap (1-354:1-354)
10 20 30 40 50 60
pF1KB3 MGCTLSAEDKAAVERSKMIDRNLREDGEKAAREVKLLLLGAGESGKSTIVKQMKIIHEAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MGCTLSAEDKAAVERSKMIDRNLREDGEKAAREVKLLLLGAGESGKSTIVKQMKIIHEAG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 YSEEECKQYKAVVYSNTIQSIIAIIRAMGRLKIDFGDSARADDARQLFVLAGAAEEGFMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 YSEEECKQYKAVVYSNTIQSIIAIIRAMGRLKIDFGDSARADDARQLFVLAGAAEEGFMT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 AELAGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLNDLDRIAQPNYIPTQQDVLRTRVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 AELAGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLNDLDRIAQPNYIPTQQDVLRTRVK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 TTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 TTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 NRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 NRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAA
250 260 270 280 290 300
310 320 330 340 350
pF1KB3 AYIQCQFEDLNKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIKNNLKDCGLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 AYIQCQFEDLNKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIKNNLKDCGLF
310 320 330 340 350
>>CCDS802.1 GNAI3 gene_id:2773|Hs108|chr1 (354 aa)
initn: 2230 init1: 2209 opt: 2209 Z-score: 2726.0 bits: 512.9 E(32554): 1.6e-145
Smith-Waterman score: 2209; 93.8% identity (98.9% similar) in 354 aa overlap (1-354:1-354)
10 20 30 40 50 60
pF1KB3 MGCTLSAEDKAAVERSKMIDRNLREDGEKAAREVKLLLLGAGESGKSTIVKQMKIIHEAG
:::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: :
CCDS80 MGCTLSAEDKAAVERSKMIDRNLREDGEKAAKEVKLLLLGAGESGKSTIVKQMKIIHEDG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 YSEEECKQYKAVVYSNTIQSIIAIIRAMGRLKIDFGDSARADDARQLFVLAGAAEEGFMT
:::.::::::.:::::::::::::::::::::::::..::::::::::::::.:::: ::
CCDS80 YSEDECKQYKVVVYSNTIQSIIAIIRAMGRLKIDFGEAARADDARQLFVLAGSAEEGVMT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 AELAGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLNDLDRIAQPNYIPTQQDVLRTRVK
::::::::::.:.::::::.:::::::::::.:::::::::.: :::::::::::::::
CCDS80 PELAGVIKRLWRDGGVQACFSRSREYQLNDSASYYLNDLDRISQSNYIPTQQDVLRTRVK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 TTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEM
::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::
CCDS80 TTGIVETHFTFKDLYFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 NRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAA
::::::::::::::::::::.::::::::::::::::::.::::::::::.:::::::::
CCDS80 NRMHESMKLFDSICNNKWFTETSIILFLNKKDLFEEKIKRSPLTICYPEYTGSNTYEEAA
250 260 270 280 290 300
310 320 330 340 350
pF1KB3 AYIQCQFEDLNKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIKNNLKDCGLF
:::::::::::.:::::::::::::::::::::::::::::::::::::.:::.
CCDS80 AYIQCQFEDLNRRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIKNNLKECGLY
310 320 330 340 350
>>CCDS2813.1 GNAI2 gene_id:2771|Hs108|chr3 (355 aa)
initn: 1468 init1: 1468 opt: 2077 Z-score: 2563.3 bits: 482.8 E(32554): 1.9e-136
Smith-Waterman score: 2077; 87.9% identity (95.8% similar) in 355 aa overlap (1-354:1-355)
10 20 30 40 50 60
pF1KB3 MGCTLSAEDKAAVERSKMIDRNLREDGEKAAREVKLLLLGAGESGKSTIVKQMKIIHEAG
::::.:::::::.:::::::.::::::::::::::::::::::::::::::::::::: :
CCDS28 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKQMKIIHEDG
10 20 30 40 50 60
70 80 90 100 110
pF1KB3 YSEEECKQYKAVVYSNTIQSIIAIIRAMGRLKIDFGDSARADDARQLFVLAGAAEE-GFM
::::::.::.:::::::::::.::..::: :.:::.: .:::::::::.:. .::: : .
CCDS28 YSEEECRQYRAVVYSNTIQSIMAIVKAMGNLQIDFADPSRADDARQLFALSCTAEEQGVL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB3 TAELAGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLNDLDRIAQPNYIPTQQDVLRTRV
.:.:::.::: : ::::::.::::::::::::::::::.:::: .:::::::::::::
CCDS28 PDDLSGVIRRLWADHGVQACFGRSREYQLNDSAAYYLNDLERIAQSDYIPTQQDVLRTRV
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB3 KTTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEE
::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::
CCDS28 KTTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSAYDLVLAEDEE
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB3 MNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEA
::::::::::::::::::::::::::::::::::::::: .::::::.:::.:.: :.::
CCDS28 MNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKITHSPLTICFPEYTGANKYDEA
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB3 AAYIQCQFEDLNKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIKNNLKDCGLF
:.::: .::::::::::::::::::::::::::::::::::::::::::::::::
CCDS28 ASYIQSKFEDLNKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIKNNLKDCGLF
310 320 330 340 350
>>CCDS59061.1 GNAI1 gene_id:2770|Hs108|chr7 (302 aa)
initn: 2006 init1: 2006 opt: 2006 Z-score: 2476.9 bits: 466.6 E(32554): 1.2e-131
Smith-Waterman score: 2006; 100.0% identity (100.0% similar) in 302 aa overlap (53-354:1-302)
30 40 50 60 70 80
pF1KB3 LREDGEKAAREVKLLLLGAGESGKSTIVKQMKIIHEAGYSEEECKQYKAVVYSNTIQSII
::::::::::::::::::::::::::::::
CCDS59 MKIIHEAGYSEEECKQYKAVVYSNTIQSII
10 20 30
90 100 110 120 130 140
pF1KB3 AIIRAMGRLKIDFGDSARADDARQLFVLAGAAEEGFMTAELAGVIKRLWKDSGVQACFNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 AIIRAMGRLKIDFGDSARADDARQLFVLAGAAEEGFMTAELAGVIKRLWKDSGVQACFNR
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB3 SREYQLNDSAAYYLNDLDRIAQPNYIPTQQDVLRTRVKTTGIVETHFTFKDLHFKMFDVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 SREYQLNDSAAYYLNDLDRIAQPNYIPTQQDVLRTRVKTTGIVETHFTFKDLHFKMFDVG
100 110 120 130 140 150
210 220 230 240 250 260
pF1KB3 GQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 GQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDT
160 170 180 190 200 210
270 280 290 300 310 320
pF1KB3 SIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAAAYIQCQFEDLNKRKDTKEIYTH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 SIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAAAYIQCQFEDLNKRKDTKEIYTH
220 230 240 250 260 270
330 340 350
pF1KB3 FTCATDTKNVQFVFDAVTDVIIKNNLKDCGLF
::::::::::::::::::::::::::::::::
CCDS59 FTCATDTKNVQFVFDAVTDVIIKNNLKDCGLF
280 290 300
>>CCDS54587.1 GNAI2 gene_id:2771|Hs108|chr3 (318 aa)
initn: 1468 init1: 1468 opt: 1849 Z-score: 2283.1 bits: 430.8 E(32554): 7.5e-121
Smith-Waterman score: 1849; 87.3% identity (95.3% similar) in 316 aa overlap (40-354:3-318)
10 20 30 40 50 60
pF1KB3 KAAVERSKMIDRNLREDGEKAAREVKLLLLGAGESGKSTIVKQMKIIHEAGYSEEECKQY
::::::::::::::::::: :::::::.::
CCDS54 MRGAGESGKSTIVKQMKIIHEDGYSEEECRQY
10 20 30
70 80 90 100 110 120
pF1KB3 KAVVYSNTIQSIIAIIRAMGRLKIDFGDSARADDARQLFVLAGAAEE-GFMTAELAGVIK
.:::::::::::.::..::: :.:::.: .:::::::::.:. .::: : . .:.:::.
CCDS54 RAVVYSNTIQSIMAIVKAMGNLQIDFADPSRADDARQLFALSCTAEEQGVLPDDLSGVIR
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB3 RLWKDSGVQACFNRSREYQLNDSAAYYLNDLDRIAQPNYIPTQQDVLRTRVKTTGIVETH
::: : ::::::.::::::::::::::::::.:::: .::::::::::::::::::::::
CCDS54 RLWADHGVQACFGRSREYQLNDSAAYYLNDLERIAQSDYIPTQQDVLRTRVKTTGIVETH
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB3 FTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMK
:::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::
CCDS54 FTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSAYDLVLAEDEEMNRMHESMK
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB3 LFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAAAYIQCQFE
:::::::::::::::::::::::::::::: .::::::.:::.:.: :.:::.::: .::
CCDS54 LFDSICNNKWFTDTSIILFLNKKDLFEEKITHSPLTICFPEYTGANKYDEAASYIQSKFE
220 230 240 250 260 270
310 320 330 340 350
pF1KB3 DLNKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIKNNLKDCGLF
::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 DLNKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIKNNLKDCGLF
280 290 300 310
>>CCDS63642.1 GNAI2 gene_id:2771|Hs108|chr3 (339 aa)
initn: 1468 init1: 1468 opt: 1849 Z-score: 2282.7 bits: 430.8 E(32554): 7.9e-121
Smith-Waterman score: 1849; 87.3% identity (95.3% similar) in 316 aa overlap (40-354:24-339)
10 20 30 40 50 60
pF1KB3 KAAVERSKMIDRNLREDGEKAAREVKLLLLGAGESGKSTIVKQMKIIHEAGYSEEECKQY
::::::::::::::::::: :::::::.::
CCDS63 MTEGVKTLGWTKQKGGCHWGRSEGAGESGKSTIVKQMKIIHEDGYSEEECRQY
10 20 30 40 50
70 80 90 100 110 120
pF1KB3 KAVVYSNTIQSIIAIIRAMGRLKIDFGDSARADDARQLFVLAGAAEE-GFMTAELAGVIK
.:::::::::::.::..::: :.:::.: .:::::::::.:. .::: : . .:.:::.
CCDS63 RAVVYSNTIQSIMAIVKAMGNLQIDFADPSRADDARQLFALSCTAEEQGVLPDDLSGVIR
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB3 RLWKDSGVQACFNRSREYQLNDSAAYYLNDLDRIAQPNYIPTQQDVLRTRVKTTGIVETH
::: : ::::::.::::::::::::::::::.:::: .::::::::::::::::::::::
CCDS63 RLWADHGVQACFGRSREYQLNDSAAYYLNDLERIAQSDYIPTQQDVLRTRVKTTGIVETH
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB3 FTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMK
:::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::
CCDS63 FTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSAYDLVLAEDEEMNRMHESMK
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB3 LFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAAAYIQCQFE
:::::::::::::::::::::::::::::: .::::::.:::.:.: :.:::.::: .::
CCDS63 LFDSICNNKWFTDTSIILFLNKKDLFEEKITHSPLTICFPEYTGANKYDEAASYIQSKFE
240 250 260 270 280 290
310 320 330 340 350
pF1KB3 DLNKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIKNNLKDCGLF
::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 DLNKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIKNNLKDCGLF
300 310 320 330
>>CCDS63644.1 GNAI2 gene_id:2771|Hs108|chr3 (303 aa)
initn: 1468 init1: 1468 opt: 1770 Z-score: 2186.1 bits: 412.8 E(32554): 1.9e-115
Smith-Waterman score: 1770; 86.8% identity (95.0% similar) in 303 aa overlap (53-354:1-303)
30 40 50 60 70 80
pF1KB3 LREDGEKAAREVKLLLLGAGESGKSTIVKQMKIIHEAGYSEEECKQYKAVVYSNTIQSII
:::::: :::::::.::.:::::::::::.
CCDS63 MKIIHEDGYSEEECRQYRAVVYSNTIQSIM
10 20 30
90 100 110 120 130 140
pF1KB3 AIIRAMGRLKIDFGDSARADDARQLFVLAGAAEE-GFMTAELAGVIKRLWKDSGVQACFN
::..::: :.:::.: .:::::::::.:. .::: : . .:.:::.::: : ::::::.
CCDS63 AIVKAMGNLQIDFADPSRADDARQLFALSCTAEEQGVLPDDLSGVIRRLWADHGVQACFG
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB3 RSREYQLNDSAAYYLNDLDRIAQPNYIPTQQDVLRTRVKTTGIVETHFTFKDLHFKMFDV
::::::::::::::::::.:::: .:::::::::::::::::::::::::::::::::::
CCDS63 RSREYQLNDSAAYYLNDLERIAQSDYIPTQQDVLRTRVKTTGIVETHFTFKDLHFKMFDV
100 110 120 130 140 150
210 220 230 240 250 260
pF1KB3 GGQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTD
::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::
CCDS63 GGQRSERKKWIHCFEGVTAIIFCVALSAYDLVLAEDEEMNRMHESMKLFDSICNNKWFTD
160 170 180 190 200 210
270 280 290 300 310 320
pF1KB3 TSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAAAYIQCQFEDLNKRKDTKEIYT
::::::::::::::::: .::::::.:::.:.: :.:::.::: .:::::::::::::::
CCDS63 TSIILFLNKKDLFEEKITHSPLTICFPEYTGANKYDEAASYIQSKFEDLNKRKDTKEIYT
220 230 240 250 260 270
330 340 350
pF1KB3 HFTCATDTKNVQFVFDAVTDVIIKNNLKDCGLF
:::::::::::::::::::::::::::::::::
CCDS63 HFTCATDTKNVQFVFDAVTDVIIKNNLKDCGLF
280 290 300
>>CCDS10757.1 GNAO1 gene_id:2775|Hs108|chr16 (354 aa)
initn: 1520 init1: 1047 opt: 1703 Z-score: 2102.5 bits: 397.5 E(32554): 8.6e-111
Smith-Waterman score: 1703; 72.8% identity (87.1% similar) in 356 aa overlap (1-354:1-354)
10 20 30 40 50 60
pF1KB3 MGCTLSAEDKAAVERSKMIDRNLREDGEKAAREVKLLLLGAGESGKSTIVKQMKIIHEAG
::::::::..::.:::: :..::.::: .::..::::::::::::::::::::::::: :
CCDS10 MGCTLSAEERAALERSKAIEKNLKEDGISAAKDVKLLLLGAGESGKSTIVKQMKIIHEDG
10 20 30 40 50 60
70 80 90 100 110
pF1KB3 YSEEECKQYKAVVYSNTIQSIIAIIRAMGRLKIDFGDSARADDARQLFVLAGAAE--EGF
.: :. :::: :::::::::. ::.::: : :..::. : ::... ... : : :
CCDS10 FSGEDVKQYKPVVYSNTIQSLAAIVRAMDTLGIEYGDKERKADAKMVCDVVSRMEDTEPF
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB3 MTAELAGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLNDLDRIAQPNYIPTQQDVLRTR
.::: ... ::: :::.: :::::::::::::: :::..::::. .: ::.::.::::
CCDS10 -SAELLSAMMRLWGDSGIQECFNRSREYQLNDSAKYYLDSLDRIGAADYQPTEQDILRTR
130 140 150 160 170
180 190 200 210 220 230
pF1KB3 VKTTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDE
::::::::::::::.:::..:::::::::::::::::: ::::::::::: :: :: :::
CCDS10 VKTTGIVETHFTFKNLHFRLFDVGGQRSERKKWIHCFEDVTAIIFCVALSGYDQVLHEDE
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB3 EMNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEE
::::::.:::::::::::::::::::::::::.:::::::::::::.:::.: ... :
CCDS10 TTNRMHESLKLFDSICNNKWFTDTSIILFLNKKDIFEEKIKKSPLTICFPEYTGPSAFTE
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB3 AAAYIQCQFEDLNKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIKNNLKDCGLF
:.:::: :.:. :: :::::: ::::::.:.:::::::::::: .::. :::.
CCDS10 AVAYIQAQYESKNKSAH-KEIYTHVTCATDTNNIQFVFDAVTDVIIAKNLRGCGLY
300 310 320 330 340 350
>>CCDS10756.1 GNAO1 gene_id:2775|Hs108|chr16 (354 aa)
initn: 1520 init1: 1037 opt: 1691 Z-score: 2087.7 bits: 394.8 E(32554): 5.8e-110
Smith-Waterman score: 1691; 72.8% identity (86.8% similar) in 356 aa overlap (1-354:1-354)
10 20 30 40 50 60
pF1KB3 MGCTLSAEDKAAVERSKMIDRNLREDGEKAAREVKLLLLGAGESGKSTIVKQMKIIHEAG
::::::::..::.:::: :..::.::: .::..::::::::::::::::::::::::: :
CCDS10 MGCTLSAEERAALERSKAIEKNLKEDGISAAKDVKLLLLGAGESGKSTIVKQMKIIHEDG
10 20 30 40 50 60
70 80 90 100 110
pF1KB3 YSEEECKQYKAVVYSNTIQSIIAIIRAMGRLKIDFGDSARADDARQLFVLAGAAE--EGF
.: :. :::: :::::::::. ::.::: : :..::. : ::... ... : : :
CCDS10 FSGEDVKQYKPVVYSNTIQSLAAIVRAMDTLGIEYGDKERKADAKMVCDVVSRMEDTEPF
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB3 MTAELAGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLNDLDRIAQPNYIPTQQDVLRTR
.::: ... ::: :::.: :::::::::::::: :::..::::. .: ::.::.::::
CCDS10 -SAELLSAMMRLWGDSGIQECFNRSREYQLNDSAKYYLDSLDRIGAADYQPTEQDILRTR
130 140 150 160 170
180 190 200 210 220 230
pF1KB3 VKTTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDE
::::::::::::::.:::..:::::::::::::::::: ::::::::::: :: :: :::
CCDS10 VKTTGIVETHFTFKNLHFRLFDVGGQRSERKKWIHCFEDVTAIIFCVALSGYDQVLHEDE
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB3 EMNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEE
::::::. :::::::::.: :::::::::::::: :::::::::::.:::.: ::::.
CCDS10 TTNRMHESLMLFDSICNNKFFIDTSIILFLNKKDLFGEKIKKSPLTICFPEYTGPNTYED
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB3 AAAYIQCQFEDLNKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIKNNLKDCGLF
:::::: :::. : :. .:::: :.::::::.:.: :::::::.:: :::. :::.
CCDS10 AAAYIQAQFESKN-RSPNKEIYCHMTCATDTNNIQVVFDAVTDIIIANNLRGCGLY
300 310 320 330 340 350
>>CCDS47625.1 GNAT3 gene_id:346562|Hs108|chr7 (354 aa)
initn: 1685 init1: 1685 opt: 1685 Z-score: 2080.3 bits: 393.4 E(32554): 1.5e-109
Smith-Waterman score: 1685; 68.4% identity (89.8% similar) in 354 aa overlap (1-354:1-354)
10 20 30 40 50 60
pF1KB3 MGCTLSAEDKAAVERSKMIDRNLREDGEKAAREVKLLLLGAGESGKSTIVKQMKIIHEAG
:: .:.:.: ...::: ....:.::.:. :: ::::::::::::::::::::::::. :
CCDS47 MGSGISSESKESAKRSKELEKKLQEDAERDARTVKLLLLGAGESGKSTIVKQMKIIHKNG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 YSEEECKQYKAVVYSNTIQSIIAIIRAMGRLKIDFGDSARADDARQLFVLAGAAEEGFMT
:::.:: ..:::.::::.:::.::..:: : ::. . :.: :::...:.. :.: ::
CCDS47 YSEQECMEFKAVIYSNTLQSILAIVKAMTTLGIDYVNPRSAEDQRQLYAMANTLEDGGMT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 AELAGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLNDLDRIAQPNYIPTQQDVLRTRVK
.:: ::::::.: :.::::.:. ::::::::::::::::::. .:.:..::::..:::
CCDS47 PQLAEVIKRLWRDPGIQACFERASEYQLNDSAAYYLNDLDRITASGYVPNEQDVLHSRVK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 TTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEM
::::.::.:.::::::.:::::::::::::::::::::: ::::.::: ::.::.::::.
CCDS47 TTGIIETQFSFKDLHFRMFDVGGQRSERKKWIHCFEGVTCIIFCAALSAYDMVLVEDEEV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 NRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAA
::::::..::.::::.:.:. :::.:::::::.:.::. : :.::.:::.: ::.:.:.
CCDS47 NRMHESLHLFNSICNHKYFSTTSIVLFLNKKDIFQEKVTKVHLSICFPEYTGPNTFEDAG
250 260 270 280 290 300
310 320 330 340 350
pF1KB3 AYIQCQFEDLNKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIKNNLKDCGLF
::. :: ::: .:. ::::.:.::::::.::.::::::::.:::.::::::::
CCDS47 NYIKNQFLDLNLKKEDKEIYSHMTCATDTQNVKFVFDAVTDIIIKENLKDCGLF
310 320 330 340 350
354 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 13:27:40 2016 done: Thu Nov 3 13:27:41 2016
Total Scan time: 2.480 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]