Result of FASTA (omim) for
pF1KB3518
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3518, 760 aa
1>>>pF1KB3518 760 - 760 aa - 760 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.3770+/-0.000348; mu= 10.5405+/- 0.022
mean_var=277.2690+/-55.656, 0's: 0 Z-trim(122.8): 89 B-trim: 94 in 1/58
Lambda= 0.077024
statistics sampled from 41542 (41647) to 41542 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.776), E-opt: 0.2 (0.488), width: 16
Scan time: 14.260
The best scores are: opt bits E(85289)
NP_001034966 (OMIM: 614767) striatin-4 isoform 2 [ ( 760) 5129 583.6 1e-165
NP_037535 (OMIM: 614767) striatin-4 isoform 1 [Hom ( 753) 5058 575.7 2.4e-163
XP_006723235 (OMIM: 614767) PREDICTED: striatin-4 ( 768) 5018 571.3 5.3e-162
XP_006723237 (OMIM: 614767) PREDICTED: striatin-4 ( 641) 4314 493.0 1.7e-138
XP_016882206 (OMIM: 614767) PREDICTED: striatin-4 ( 641) 4314 493.0 1.7e-138
XP_006723234 (OMIM: 614767) PREDICTED: striatin-4 ( 775) 3959 453.6 1.4e-126
XP_016882205 (OMIM: 614767) PREDICTED: striatin-4 ( 656) 3919 449.1 2.8e-125
XP_016882207 (OMIM: 614767) PREDICTED: striatin-4 ( 539) 3497 402.1 3.2e-111
XP_016882208 (OMIM: 614767) PREDICTED: striatin-4 ( 466) 2592 301.4 5.5e-81
XP_011525181 (OMIM: 614767) PREDICTED: striatin-4 ( 365) 2464 287.1 8.9e-77
XP_005267626 (OMIM: 614766) PREDICTED: striatin-3 ( 760) 2337 273.4 2.5e-72
XP_005264576 (OMIM: 614765) PREDICTED: striatin is ( 743) 2249 263.6 2.2e-69
XP_005267627 (OMIM: 614766) PREDICTED: striatin-3 ( 750) 1886 223.2 3.1e-57
NP_055389 (OMIM: 614766) striatin-3 isoform 2 [Hom ( 713) 1616 193.2 3.2e-48
NP_001077362 (OMIM: 614766) striatin-3 isoform 1 [ ( 797) 1603 191.8 9.4e-48
NP_003153 (OMIM: 614765) striatin [Homo sapiens] ( 780) 1529 183.6 2.8e-45
XP_011531375 (OMIM: 614765) PREDICTED: striatin is ( 809) 1517 182.3 7.1e-45
XP_011525180 (OMIM: 614767) PREDICTED: striatin-4 ( 481) 1422 171.4 7.7e-42
>>NP_001034966 (OMIM: 614767) striatin-4 isoform 2 [Homo (760 aa)
initn: 5129 init1: 5129 opt: 5129 Z-score: 3096.1 bits: 583.6 E(85289): 1e-165
Smith-Waterman score: 5129; 100.0% identity (100.0% similar) in 760 aa overlap (1-760:1-760)
10 20 30 40 50 60
pF1KB3 MMEERAAAAVAAAASSCRPLGSGAGPGPTGAAPVSAPAPGPGPAGKGGGGGGSPGPTAGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MMEERAAAAVAAAASSCRPLGSGAGPGPTGAAPVSAPAPGPGPAGKGGGGGGSPGPTAGP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 EPLSLPGILHFIQHEWARFEAEKARWEAERAELQAQVAFLQGERKGQENLKTDLVRRIKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EPLSLPGILHFIQHEWARFEAEKARWEAERAELQAQVAFLQGERKGQENLKTDLVRRIKM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 LEYALKQERAKYHKLKFGTDLNQGEKKADVSEQVSNGPVESVTLENSPLVWKEGRQLLRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LEYALKQERAKYHKLKFGTDLNQGEKKADVSEQVSNGPVESVTLENSPLVWKEGRQLLRQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 YLEEVGYTDTILDMRSKRVRSLLGRSLELNGAVEPSEGAPRAPPGPAGLSGGESLLVKQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YLEEVGYTDTILDMRSKRVRSLLGRSLELNGAVEPSEGAPRAPPGPAGLSGGESLLVKQI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 EEQIKRNAAGKDGKERLGGSVLGQIPFLQNCEDEDSDEDDELDSVQHKKQRVKLPSKALV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEQIKRNAAGKDGKERLGGSVLGQIPFLQNCEDEDSDEDDELDSVQHKKQRVKLPSKALV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 PEMEDEDEEDDSEDAINEFDFLGSGEDGEGAPDPRRCTVDGSPHELESRRVKLQGILADL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PEMEDEDEEDDSEDAINEFDFLGSGEDGEGAPDPRRCTVDGSPHELESRRVKLQGILADL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 RDVDGLPPKVTGPPPGTPQPRPHEGSFGFSSDVFIMDTIGGGEVSLGDLADLTVTNDNDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RDVDGLPPKVTGPPPGTPQPRPHEGSFGFSSDVFIMDTIGGGEVSLGDLADLTVTNDNDL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB3 SCDLSDSKDAFKKTWNPKFTLRSHYDGIRSLAFHHSQSALLTASEDGTLKLWNLQKAVTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SCDLSDSKDAFKKTWNPKFTLRSHYDGIRSLAFHHSQSALLTASEDGTLKLWNLQKAVTA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB3 KKNAALDVEPIHAFRAHRGPVLAVAMGSNSEYCYSGGADACIHSWKIPDLSMDPYDGYDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KKNAALDVEPIHAFRAHRGPVLAVAMGSNSEYCYSGGADACIHSWKIPDLSMDPYDGYDP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB3 SVLSHVLEGHGDAVWGLAFSPTSQRLASCSADGTVRIWDPSSSSPACLCTFPTASEHGVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SVLSHVLEGHGDAVWGLAFSPTSQRLASCSADGTVRIWDPSSSSPACLCTFPTASEHGVP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB3 TSVAFTSTEPAHIVASFRSGDTVLYDMEVGSALLTLESRGSSGPTQINQVVSHPNQPLTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TSVAFTSTEPAHIVASFRSGDTVLYDMEVGSALLTLESRGSSGPTQINQVVSHPNQPLTI
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB3 TAHDDRGIRFLDNRTGKPVHSMVAHLDAVTCLAVDPNGAFLMSGSHDCSLRLWSLDNKTC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TAHDDRGIRFLDNRTGKPVHSMVAHLDAVTCLAVDPNGAFLMSGSHDCSLRLWSLDNKTC
670 680 690 700 710 720
730 740 750 760
pF1KB3 VQEITAHRKKHEEAIHAVACHPSKALIASAGADALAKVFV
::::::::::::::::::::::::::::::::::::::::
NP_001 VQEITAHRKKHEEAIHAVACHPSKALIASAGADALAKVFV
730 740 750 760
>>NP_037535 (OMIM: 614767) striatin-4 isoform 1 [Homo sa (753 aa)
initn: 2597 init1: 2597 opt: 5058 Z-score: 3053.5 bits: 575.7 E(85289): 2.4e-163
Smith-Waterman score: 5058; 99.1% identity (99.1% similar) in 760 aa overlap (1-760:1-753)
10 20 30 40 50 60
pF1KB3 MMEERAAAAVAAAASSCRPLGSGAGPGPTGAAPVSAPAPGPGPAGKGGGGGGSPGPTAGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 MMEERAAAAVAAAASSCRPLGSGAGPGPTGAAPVSAPAPGPGPAGKGGGGGGSPGPTAGP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 EPLSLPGILHFIQHEWARFEAEKARWEAERAELQAQVAFLQGERKGQENLKTDLVRRIKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 EPLSLPGILHFIQHEWARFEAEKARWEAERAELQAQVAFLQGERKGQENLKTDLVRRIKM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 LEYALKQERAKYHKLKFGTDLNQGEKKADVSEQVSNGPVESVTLENSPLVWKEGRQLLRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 LEYALKQERAKYHKLKFGTDLNQGEKKADVSEQVSNGPVESVTLENSPLVWKEGRQLLRQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 YLEEVGYTDTILDMRSKRVRSLLGRSLELNGAVEPSEGAPRAPPGPAGLSGGESLLVKQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 YLEEVGYTDTILDMRSKRVRSLLGRSLELNGAVEPSEGAPRAPPGPAGLSGGESLLVKQI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 EEQIKRNAAGKDGKERLGGSVLGQIPFLQNCEDEDSDEDDELDSVQHKKQRVKLPSKALV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 EEQIKRNAAGKDGKERLGGSVLGQIPFLQNCEDEDSDEDDELDSVQHKKQRVKLPSKALV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 PEMEDEDEEDDSEDAINEFDFLGSGEDGEGAPDPRRCTVDGSPHELESRRVKLQGILADL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 PEMEDEDEEDDSEDAINEFDFLGSGEDGEGAPDPRRCTVDGSPHELESRRVKLQGILADL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 RDVDGLPPKVTGPPPGTPQPRPHEGSFGFSSDVFIMDTIGGGEVSLGDLADLTVTNDNDL
:::::::::::::::::::::::: :::::::::::::::::::::::::::::
NP_037 RDVDGLPPKVTGPPPGTPQPRPHE-------DVFIMDTIGGGEVSLGDLADLTVTNDNDL
370 380 390 400 410
430 440 450 460 470 480
pF1KB3 SCDLSDSKDAFKKTWNPKFTLRSHYDGIRSLAFHHSQSALLTASEDGTLKLWNLQKAVTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 SCDLSDSKDAFKKTWNPKFTLRSHYDGIRSLAFHHSQSALLTASEDGTLKLWNLQKAVTA
420 430 440 450 460 470
490 500 510 520 530 540
pF1KB3 KKNAALDVEPIHAFRAHRGPVLAVAMGSNSEYCYSGGADACIHSWKIPDLSMDPYDGYDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 KKNAALDVEPIHAFRAHRGPVLAVAMGSNSEYCYSGGADACIHSWKIPDLSMDPYDGYDP
480 490 500 510 520 530
550 560 570 580 590 600
pF1KB3 SVLSHVLEGHGDAVWGLAFSPTSQRLASCSADGTVRIWDPSSSSPACLCTFPTASEHGVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 SVLSHVLEGHGDAVWGLAFSPTSQRLASCSADGTVRIWDPSSSSPACLCTFPTASEHGVP
540 550 560 570 580 590
610 620 630 640 650 660
pF1KB3 TSVAFTSTEPAHIVASFRSGDTVLYDMEVGSALLTLESRGSSGPTQINQVVSHPNQPLTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 TSVAFTSTEPAHIVASFRSGDTVLYDMEVGSALLTLESRGSSGPTQINQVVSHPNQPLTI
600 610 620 630 640 650
670 680 690 700 710 720
pF1KB3 TAHDDRGIRFLDNRTGKPVHSMVAHLDAVTCLAVDPNGAFLMSGSHDCSLRLWSLDNKTC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 TAHDDRGIRFLDNRTGKPVHSMVAHLDAVTCLAVDPNGAFLMSGSHDCSLRLWSLDNKTC
660 670 680 690 700 710
730 740 750 760
pF1KB3 VQEITAHRKKHEEAIHAVACHPSKALIASAGADALAKVFV
::::::::::::::::::::::::::::::::::::::::
NP_037 VQEITAHRKKHEEAIHAVACHPSKALIASAGADALAKVFV
720 730 740 750
>>XP_006723235 (OMIM: 614767) PREDICTED: striatin-4 isof (768 aa)
initn: 3723 init1: 2512 opt: 5018 Z-score: 3029.4 bits: 571.3 E(85289): 5.3e-162
Smith-Waterman score: 5018; 97.2% identity (97.2% similar) in 775 aa overlap (1-760:1-768)
10 20 30 40 50 60
pF1KB3 MMEERAAAAVAAAASSCRPLGSGAGPGPTGAAPVSAPAPGPGPAGKGGGGGGSPGPTAGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MMEERAAAAVAAAASSCRPLGSGAGPGPTGAAPVSAPAPGPGPAGKGGGGGGSPGPTAGP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 EPLSLPGILHFIQHEWARFEAEKARWEAERAELQAQVAFLQGERKGQENLKTDLVRRIKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EPLSLPGILHFIQHEWARFEAEKARWEAERAELQAQVAFLQGERKGQENLKTDLVRRIKM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 LEYALKQERAKYHKLKFGTDLNQGEKKADVSEQVSNGPVESVTLENSPLVWKEGRQLLRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LEYALKQERAKYHKLKFGTDLNQGEKKADVSEQVSNGPVESVTLENSPLVWKEGRQLLRQ
130 140 150 160 170 180
190 200 210 220
pF1KB3 YL---------------EEVGYTDTILDMRSKRVRSLLGRSLELNGAVEPSEGAPRAPPG
:: :::::::::::::::::::::::::::::::::::::::::::
XP_006 YLVKIYEAWLFISQGYLEEVGYTDTILDMRSKRVRSLLGRSLELNGAVEPSEGAPRAPPG
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB3 PAGLSGGESLLVKQIEEQIKRNAAGKDGKERLGGSVLGQIPFLQNCEDEDSDEDDELDSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PAGLSGGESLLVKQIEEQIKRNAAGKDGKERLGGSVLGQIPFLQNCEDEDSDEDDELDSV
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB3 QHKKQRVKLPSKALVPEMEDEDEEDDSEDAINEFDFLGSGEDGEGAPDPRRCTVDGSPHE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QHKKQRVKLPSKALVPEMEDEDEEDDSEDAINEFDFLGSGEDGEGAPDPRRCTVDGSPHE
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB3 LESRRVKLQGILADLRDVDGLPPKVTGPPPGTPQPRPHEGSFGFSSDVFIMDTIGGGEVS
::::::::::::::::::::::::::::::::::::::: ::::::::::::::
XP_006 LESRRVKLQGILADLRDVDGLPPKVTGPPPGTPQPRPHE-------DVFIMDTIGGGEVS
370 380 390 400 410
410 420 430 440 450 460
pF1KB3 LGDLADLTVTNDNDLSCDLSDSKDAFKKTWNPKFTLRSHYDGIRSLAFHHSQSALLTASE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LGDLADLTVTNDNDLSCDLSDSKDAFKKTWNPKFTLRSHYDGIRSLAFHHSQSALLTASE
420 430 440 450 460 470
470 480 490 500 510 520
pF1KB3 DGTLKLWNLQKAVTAKKNAALDVEPIHAFRAHRGPVLAVAMGSNSEYCYSGGADACIHSW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DGTLKLWNLQKAVTAKKNAALDVEPIHAFRAHRGPVLAVAMGSNSEYCYSGGADACIHSW
480 490 500 510 520 530
530 540 550 560 570 580
pF1KB3 KIPDLSMDPYDGYDPSVLSHVLEGHGDAVWGLAFSPTSQRLASCSADGTVRIWDPSSSSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KIPDLSMDPYDGYDPSVLSHVLEGHGDAVWGLAFSPTSQRLASCSADGTVRIWDPSSSSP
540 550 560 570 580 590
590 600 610 620 630 640
pF1KB3 ACLCTFPTASEHGVPTSVAFTSTEPAHIVASFRSGDTVLYDMEVGSALLTLESRGSSGPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ACLCTFPTASEHGVPTSVAFTSTEPAHIVASFRSGDTVLYDMEVGSALLTLESRGSSGPT
600 610 620 630 640 650
650 660 670 680 690 700
pF1KB3 QINQVVSHPNQPLTITAHDDRGIRFLDNRTGKPVHSMVAHLDAVTCLAVDPNGAFLMSGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QINQVVSHPNQPLTITAHDDRGIRFLDNRTGKPVHSMVAHLDAVTCLAVDPNGAFLMSGS
660 670 680 690 700 710
710 720 730 740 750 760
pF1KB3 HDCSLRLWSLDNKTCVQEITAHRKKHEEAIHAVACHPSKALIASAGADALAKVFV
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 HDCSLRLWSLDNKTCVQEITAHRKKHEEAIHAVACHPSKALIASAGADALAKVFV
720 730 740 750 760
>>XP_006723237 (OMIM: 614767) PREDICTED: striatin-4 isof (641 aa)
initn: 4314 init1: 4314 opt: 4314 Z-score: 2607.5 bits: 493.0 E(85289): 1.7e-138
Smith-Waterman score: 4314; 100.0% identity (100.0% similar) in 641 aa overlap (120-760:1-641)
90 100 110 120 130 140
pF1KB3 RAELQAQVAFLQGERKGQENLKTDLVRRIKMLEYALKQERAKYHKLKFGTDLNQGEKKAD
::::::::::::::::::::::::::::::
XP_006 MLEYALKQERAKYHKLKFGTDLNQGEKKAD
10 20 30
150 160 170 180 190 200
pF1KB3 VSEQVSNGPVESVTLENSPLVWKEGRQLLRQYLEEVGYTDTILDMRSKRVRSLLGRSLEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VSEQVSNGPVESVTLENSPLVWKEGRQLLRQYLEEVGYTDTILDMRSKRVRSLLGRSLEL
40 50 60 70 80 90
210 220 230 240 250 260
pF1KB3 NGAVEPSEGAPRAPPGPAGLSGGESLLVKQIEEQIKRNAAGKDGKERLGGSVLGQIPFLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NGAVEPSEGAPRAPPGPAGLSGGESLLVKQIEEQIKRNAAGKDGKERLGGSVLGQIPFLQ
100 110 120 130 140 150
270 280 290 300 310 320
pF1KB3 NCEDEDSDEDDELDSVQHKKQRVKLPSKALVPEMEDEDEEDDSEDAINEFDFLGSGEDGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NCEDEDSDEDDELDSVQHKKQRVKLPSKALVPEMEDEDEEDDSEDAINEFDFLGSGEDGE
160 170 180 190 200 210
330 340 350 360 370 380
pF1KB3 GAPDPRRCTVDGSPHELESRRVKLQGILADLRDVDGLPPKVTGPPPGTPQPRPHEGSFGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GAPDPRRCTVDGSPHELESRRVKLQGILADLRDVDGLPPKVTGPPPGTPQPRPHEGSFGF
220 230 240 250 260 270
390 400 410 420 430 440
pF1KB3 SSDVFIMDTIGGGEVSLGDLADLTVTNDNDLSCDLSDSKDAFKKTWNPKFTLRSHYDGIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SSDVFIMDTIGGGEVSLGDLADLTVTNDNDLSCDLSDSKDAFKKTWNPKFTLRSHYDGIR
280 290 300 310 320 330
450 460 470 480 490 500
pF1KB3 SLAFHHSQSALLTASEDGTLKLWNLQKAVTAKKNAALDVEPIHAFRAHRGPVLAVAMGSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SLAFHHSQSALLTASEDGTLKLWNLQKAVTAKKNAALDVEPIHAFRAHRGPVLAVAMGSN
340 350 360 370 380 390
510 520 530 540 550 560
pF1KB3 SEYCYSGGADACIHSWKIPDLSMDPYDGYDPSVLSHVLEGHGDAVWGLAFSPTSQRLASC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SEYCYSGGADACIHSWKIPDLSMDPYDGYDPSVLSHVLEGHGDAVWGLAFSPTSQRLASC
400 410 420 430 440 450
570 580 590 600 610 620
pF1KB3 SADGTVRIWDPSSSSPACLCTFPTASEHGVPTSVAFTSTEPAHIVASFRSGDTVLYDMEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SADGTVRIWDPSSSSPACLCTFPTASEHGVPTSVAFTSTEPAHIVASFRSGDTVLYDMEV
460 470 480 490 500 510
630 640 650 660 670 680
pF1KB3 GSALLTLESRGSSGPTQINQVVSHPNQPLTITAHDDRGIRFLDNRTGKPVHSMVAHLDAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GSALLTLESRGSSGPTQINQVVSHPNQPLTITAHDDRGIRFLDNRTGKPVHSMVAHLDAV
520 530 540 550 560 570
690 700 710 720 730 740
pF1KB3 TCLAVDPNGAFLMSGSHDCSLRLWSLDNKTCVQEITAHRKKHEEAIHAVACHPSKALIAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TCLAVDPNGAFLMSGSHDCSLRLWSLDNKTCVQEITAHRKKHEEAIHAVACHPSKALIAS
580 590 600 610 620 630
750 760
pF1KB3 AGADALAKVFV
:::::::::::
XP_006 AGADALAKVFV
640
>>XP_016882206 (OMIM: 614767) PREDICTED: striatin-4 isof (641 aa)
initn: 4314 init1: 4314 opt: 4314 Z-score: 2607.5 bits: 493.0 E(85289): 1.7e-138
Smith-Waterman score: 4314; 100.0% identity (100.0% similar) in 641 aa overlap (120-760:1-641)
90 100 110 120 130 140
pF1KB3 RAELQAQVAFLQGERKGQENLKTDLVRRIKMLEYALKQERAKYHKLKFGTDLNQGEKKAD
::::::::::::::::::::::::::::::
XP_016 MLEYALKQERAKYHKLKFGTDLNQGEKKAD
10 20 30
150 160 170 180 190 200
pF1KB3 VSEQVSNGPVESVTLENSPLVWKEGRQLLRQYLEEVGYTDTILDMRSKRVRSLLGRSLEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VSEQVSNGPVESVTLENSPLVWKEGRQLLRQYLEEVGYTDTILDMRSKRVRSLLGRSLEL
40 50 60 70 80 90
210 220 230 240 250 260
pF1KB3 NGAVEPSEGAPRAPPGPAGLSGGESLLVKQIEEQIKRNAAGKDGKERLGGSVLGQIPFLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NGAVEPSEGAPRAPPGPAGLSGGESLLVKQIEEQIKRNAAGKDGKERLGGSVLGQIPFLQ
100 110 120 130 140 150
270 280 290 300 310 320
pF1KB3 NCEDEDSDEDDELDSVQHKKQRVKLPSKALVPEMEDEDEEDDSEDAINEFDFLGSGEDGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NCEDEDSDEDDELDSVQHKKQRVKLPSKALVPEMEDEDEEDDSEDAINEFDFLGSGEDGE
160 170 180 190 200 210
330 340 350 360 370 380
pF1KB3 GAPDPRRCTVDGSPHELESRRVKLQGILADLRDVDGLPPKVTGPPPGTPQPRPHEGSFGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GAPDPRRCTVDGSPHELESRRVKLQGILADLRDVDGLPPKVTGPPPGTPQPRPHEGSFGF
220 230 240 250 260 270
390 400 410 420 430 440
pF1KB3 SSDVFIMDTIGGGEVSLGDLADLTVTNDNDLSCDLSDSKDAFKKTWNPKFTLRSHYDGIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSDVFIMDTIGGGEVSLGDLADLTVTNDNDLSCDLSDSKDAFKKTWNPKFTLRSHYDGIR
280 290 300 310 320 330
450 460 470 480 490 500
pF1KB3 SLAFHHSQSALLTASEDGTLKLWNLQKAVTAKKNAALDVEPIHAFRAHRGPVLAVAMGSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLAFHHSQSALLTASEDGTLKLWNLQKAVTAKKNAALDVEPIHAFRAHRGPVLAVAMGSN
340 350 360 370 380 390
510 520 530 540 550 560
pF1KB3 SEYCYSGGADACIHSWKIPDLSMDPYDGYDPSVLSHVLEGHGDAVWGLAFSPTSQRLASC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SEYCYSGGADACIHSWKIPDLSMDPYDGYDPSVLSHVLEGHGDAVWGLAFSPTSQRLASC
400 410 420 430 440 450
570 580 590 600 610 620
pF1KB3 SADGTVRIWDPSSSSPACLCTFPTASEHGVPTSVAFTSTEPAHIVASFRSGDTVLYDMEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SADGTVRIWDPSSSSPACLCTFPTASEHGVPTSVAFTSTEPAHIVASFRSGDTVLYDMEV
460 470 480 490 500 510
630 640 650 660 670 680
pF1KB3 GSALLTLESRGSSGPTQINQVVSHPNQPLTITAHDDRGIRFLDNRTGKPVHSMVAHLDAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GSALLTLESRGSSGPTQINQVVSHPNQPLTITAHDDRGIRFLDNRTGKPVHSMVAHLDAV
520 530 540 550 560 570
690 700 710 720 730 740
pF1KB3 TCLAVDPNGAFLMSGSHDCSLRLWSLDNKTCVQEITAHRKKHEEAIHAVACHPSKALIAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TCLAVDPNGAFLMSGSHDCSLRLWSLDNKTCVQEITAHRKKHEEAIHAVACHPSKALIAS
580 590 600 610 620 630
750 760
pF1KB3 AGADALAKVFV
:::::::::::
XP_016 AGADALAKVFV
640
>>XP_006723234 (OMIM: 614767) PREDICTED: striatin-4 isof (775 aa)
initn: 3919 init1: 3919 opt: 3959 Z-score: 2393.4 bits: 453.6 E(85289): 1.4e-126
Smith-Waterman score: 5089; 98.1% identity (98.1% similar) in 775 aa overlap (1-760:1-775)
10 20 30 40 50 60
pF1KB3 MMEERAAAAVAAAASSCRPLGSGAGPGPTGAAPVSAPAPGPGPAGKGGGGGGSPGPTAGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MMEERAAAAVAAAASSCRPLGSGAGPGPTGAAPVSAPAPGPGPAGKGGGGGGSPGPTAGP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 EPLSLPGILHFIQHEWARFEAEKARWEAERAELQAQVAFLQGERKGQENLKTDLVRRIKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EPLSLPGILHFIQHEWARFEAEKARWEAERAELQAQVAFLQGERKGQENLKTDLVRRIKM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 LEYALKQERAKYHKLKFGTDLNQGEKKADVSEQVSNGPVESVTLENSPLVWKEGRQLLRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LEYALKQERAKYHKLKFGTDLNQGEKKADVSEQVSNGPVESVTLENSPLVWKEGRQLLRQ
130 140 150 160 170 180
190 200 210 220
pF1KB3 YL---------------EEVGYTDTILDMRSKRVRSLLGRSLELNGAVEPSEGAPRAPPG
:: :::::::::::::::::::::::::::::::::::::::::::
XP_006 YLVKIYEAWLFISQGYLEEVGYTDTILDMRSKRVRSLLGRSLELNGAVEPSEGAPRAPPG
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB3 PAGLSGGESLLVKQIEEQIKRNAAGKDGKERLGGSVLGQIPFLQNCEDEDSDEDDELDSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PAGLSGGESLLVKQIEEQIKRNAAGKDGKERLGGSVLGQIPFLQNCEDEDSDEDDELDSV
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB3 QHKKQRVKLPSKALVPEMEDEDEEDDSEDAINEFDFLGSGEDGEGAPDPRRCTVDGSPHE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QHKKQRVKLPSKALVPEMEDEDEEDDSEDAINEFDFLGSGEDGEGAPDPRRCTVDGSPHE
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB3 LESRRVKLQGILADLRDVDGLPPKVTGPPPGTPQPRPHEGSFGFSSDVFIMDTIGGGEVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LESRRVKLQGILADLRDVDGLPPKVTGPPPGTPQPRPHEGSFGFSSDVFIMDTIGGGEVS
370 380 390 400 410 420
410 420 430 440 450 460
pF1KB3 LGDLADLTVTNDNDLSCDLSDSKDAFKKTWNPKFTLRSHYDGIRSLAFHHSQSALLTASE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LGDLADLTVTNDNDLSCDLSDSKDAFKKTWNPKFTLRSHYDGIRSLAFHHSQSALLTASE
430 440 450 460 470 480
470 480 490 500 510 520
pF1KB3 DGTLKLWNLQKAVTAKKNAALDVEPIHAFRAHRGPVLAVAMGSNSEYCYSGGADACIHSW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DGTLKLWNLQKAVTAKKNAALDVEPIHAFRAHRGPVLAVAMGSNSEYCYSGGADACIHSW
490 500 510 520 530 540
530 540 550 560 570 580
pF1KB3 KIPDLSMDPYDGYDPSVLSHVLEGHGDAVWGLAFSPTSQRLASCSADGTVRIWDPSSSSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KIPDLSMDPYDGYDPSVLSHVLEGHGDAVWGLAFSPTSQRLASCSADGTVRIWDPSSSSP
550 560 570 580 590 600
590 600 610 620 630 640
pF1KB3 ACLCTFPTASEHGVPTSVAFTSTEPAHIVASFRSGDTVLYDMEVGSALLTLESRGSSGPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ACLCTFPTASEHGVPTSVAFTSTEPAHIVASFRSGDTVLYDMEVGSALLTLESRGSSGPT
610 620 630 640 650 660
650 660 670 680 690 700
pF1KB3 QINQVVSHPNQPLTITAHDDRGIRFLDNRTGKPVHSMVAHLDAVTCLAVDPNGAFLMSGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QINQVVSHPNQPLTITAHDDRGIRFLDNRTGKPVHSMVAHLDAVTCLAVDPNGAFLMSGS
670 680 690 700 710 720
710 720 730 740 750 760
pF1KB3 HDCSLRLWSLDNKTCVQEITAHRKKHEEAIHAVACHPSKALIASAGADALAKVFV
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 HDCSLRLWSLDNKTCVQEITAHRKKHEEAIHAVACHPSKALIASAGADALAKVFV
730 740 750 760 770
>>XP_016882205 (OMIM: 614767) PREDICTED: striatin-4 isof (656 aa)
initn: 3919 init1: 3919 opt: 3919 Z-score: 2370.2 bits: 449.1 E(85289): 2.8e-125
Smith-Waterman score: 4274; 97.7% identity (97.7% similar) in 656 aa overlap (120-760:1-656)
90 100 110 120 130 140
pF1KB3 RAELQAQVAFLQGERKGQENLKTDLVRRIKMLEYALKQERAKYHKLKFGTDLNQGEKKAD
::::::::::::::::::::::::::::::
XP_016 MLEYALKQERAKYHKLKFGTDLNQGEKKAD
10 20 30
150 160 170 180 190
pF1KB3 VSEQVSNGPVESVTLENSPLVWKEGRQLLRQYL---------------EEVGYTDTILDM
::::::::::::::::::::::::::::::::: ::::::::::::
XP_016 VSEQVSNGPVESVTLENSPLVWKEGRQLLRQYLVKIYEAWLFISQGYLEEVGYTDTILDM
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB3 RSKRVRSLLGRSLELNGAVEPSEGAPRAPPGPAGLSGGESLLVKQIEEQIKRNAAGKDGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RSKRVRSLLGRSLELNGAVEPSEGAPRAPPGPAGLSGGESLLVKQIEEQIKRNAAGKDGK
100 110 120 130 140 150
260 270 280 290 300 310
pF1KB3 ERLGGSVLGQIPFLQNCEDEDSDEDDELDSVQHKKQRVKLPSKALVPEMEDEDEEDDSED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ERLGGSVLGQIPFLQNCEDEDSDEDDELDSVQHKKQRVKLPSKALVPEMEDEDEEDDSED
160 170 180 190 200 210
320 330 340 350 360 370
pF1KB3 AINEFDFLGSGEDGEGAPDPRRCTVDGSPHELESRRVKLQGILADLRDVDGLPPKVTGPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AINEFDFLGSGEDGEGAPDPRRCTVDGSPHELESRRVKLQGILADLRDVDGLPPKVTGPP
220 230 240 250 260 270
380 390 400 410 420 430
pF1KB3 PGTPQPRPHEGSFGFSSDVFIMDTIGGGEVSLGDLADLTVTNDNDLSCDLSDSKDAFKKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PGTPQPRPHEGSFGFSSDVFIMDTIGGGEVSLGDLADLTVTNDNDLSCDLSDSKDAFKKT
280 290 300 310 320 330
440 450 460 470 480 490
pF1KB3 WNPKFTLRSHYDGIRSLAFHHSQSALLTASEDGTLKLWNLQKAVTAKKNAALDVEPIHAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WNPKFTLRSHYDGIRSLAFHHSQSALLTASEDGTLKLWNLQKAVTAKKNAALDVEPIHAF
340 350 360 370 380 390
500 510 520 530 540 550
pF1KB3 RAHRGPVLAVAMGSNSEYCYSGGADACIHSWKIPDLSMDPYDGYDPSVLSHVLEGHGDAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RAHRGPVLAVAMGSNSEYCYSGGADACIHSWKIPDLSMDPYDGYDPSVLSHVLEGHGDAV
400 410 420 430 440 450
560 570 580 590 600 610
pF1KB3 WGLAFSPTSQRLASCSADGTVRIWDPSSSSPACLCTFPTASEHGVPTSVAFTSTEPAHIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WGLAFSPTSQRLASCSADGTVRIWDPSSSSPACLCTFPTASEHGVPTSVAFTSTEPAHIV
460 470 480 490 500 510
620 630 640 650 660 670
pF1KB3 ASFRSGDTVLYDMEVGSALLTLESRGSSGPTQINQVVSHPNQPLTITAHDDRGIRFLDNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ASFRSGDTVLYDMEVGSALLTLESRGSSGPTQINQVVSHPNQPLTITAHDDRGIRFLDNR
520 530 540 550 560 570
680 690 700 710 720 730
pF1KB3 TGKPVHSMVAHLDAVTCLAVDPNGAFLMSGSHDCSLRLWSLDNKTCVQEITAHRKKHEEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TGKPVHSMVAHLDAVTCLAVDPNGAFLMSGSHDCSLRLWSLDNKTCVQEITAHRKKHEEA
580 590 600 610 620 630
740 750 760
pF1KB3 IHAVACHPSKALIASAGADALAKVFV
::::::::::::::::::::::::::
XP_016 IHAVACHPSKALIASAGADALAKVFV
640 650
>>XP_016882207 (OMIM: 614767) PREDICTED: striatin-4 isof (539 aa)
initn: 3497 init1: 3497 opt: 3497 Z-score: 2117.7 bits: 402.1 E(85289): 3.2e-111
Smith-Waterman score: 3497; 100.0% identity (100.0% similar) in 514 aa overlap (247-760:26-539)
220 230 240 250 260 270
pF1KB3 EGAPRAPPGPAGLSGGESLLVKQIEEQIKRNAAGKDGKERLGGSVLGQIPFLQNCEDEDS
::::::::::::::::::::::::::::::
XP_016 MAERGDVFVDLHLELHPAFSRSQAGNAAGKDGKERLGGSVLGQIPFLQNCEDEDS
10 20 30 40 50
280 290 300 310 320 330
pF1KB3 DEDDELDSVQHKKQRVKLPSKALVPEMEDEDEEDDSEDAINEFDFLGSGEDGEGAPDPRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DEDDELDSVQHKKQRVKLPSKALVPEMEDEDEEDDSEDAINEFDFLGSGEDGEGAPDPRR
60 70 80 90 100 110
340 350 360 370 380 390
pF1KB3 CTVDGSPHELESRRVKLQGILADLRDVDGLPPKVTGPPPGTPQPRPHEGSFGFSSDVFIM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CTVDGSPHELESRRVKLQGILADLRDVDGLPPKVTGPPPGTPQPRPHEGSFGFSSDVFIM
120 130 140 150 160 170
400 410 420 430 440 450
pF1KB3 DTIGGGEVSLGDLADLTVTNDNDLSCDLSDSKDAFKKTWNPKFTLRSHYDGIRSLAFHHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DTIGGGEVSLGDLADLTVTNDNDLSCDLSDSKDAFKKTWNPKFTLRSHYDGIRSLAFHHS
180 190 200 210 220 230
460 470 480 490 500 510
pF1KB3 QSALLTASEDGTLKLWNLQKAVTAKKNAALDVEPIHAFRAHRGPVLAVAMGSNSEYCYSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QSALLTASEDGTLKLWNLQKAVTAKKNAALDVEPIHAFRAHRGPVLAVAMGSNSEYCYSG
240 250 260 270 280 290
520 530 540 550 560 570
pF1KB3 GADACIHSWKIPDLSMDPYDGYDPSVLSHVLEGHGDAVWGLAFSPTSQRLASCSADGTVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GADACIHSWKIPDLSMDPYDGYDPSVLSHVLEGHGDAVWGLAFSPTSQRLASCSADGTVR
300 310 320 330 340 350
580 590 600 610 620 630
pF1KB3 IWDPSSSSPACLCTFPTASEHGVPTSVAFTSTEPAHIVASFRSGDTVLYDMEVGSALLTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IWDPSSSSPACLCTFPTASEHGVPTSVAFTSTEPAHIVASFRSGDTVLYDMEVGSALLTL
360 370 380 390 400 410
640 650 660 670 680 690
pF1KB3 ESRGSSGPTQINQVVSHPNQPLTITAHDDRGIRFLDNRTGKPVHSMVAHLDAVTCLAVDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ESRGSSGPTQINQVVSHPNQPLTITAHDDRGIRFLDNRTGKPVHSMVAHLDAVTCLAVDP
420 430 440 450 460 470
700 710 720 730 740 750
pF1KB3 NGAFLMSGSHDCSLRLWSLDNKTCVQEITAHRKKHEEAIHAVACHPSKALIASAGADALA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NGAFLMSGSHDCSLRLWSLDNKTCVQEITAHRKKHEEAIHAVACHPSKALIASAGADALA
480 490 500 510 520 530
760
pF1KB3 KVFV
::::
XP_016 KVFV
>>XP_016882208 (OMIM: 614767) PREDICTED: striatin-4 isof (466 aa)
initn: 2592 init1: 2592 opt: 2592 Z-score: 1575.0 bits: 301.4 E(85289): 5.5e-81
Smith-Waterman score: 2592; 100.0% identity (100.0% similar) in 384 aa overlap (1-384:1-384)
10 20 30 40 50 60
pF1KB3 MMEERAAAAVAAAASSCRPLGSGAGPGPTGAAPVSAPAPGPGPAGKGGGGGGSPGPTAGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MMEERAAAAVAAAASSCRPLGSGAGPGPTGAAPVSAPAPGPGPAGKGGGGGGSPGPTAGP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 EPLSLPGILHFIQHEWARFEAEKARWEAERAELQAQVAFLQGERKGQENLKTDLVRRIKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EPLSLPGILHFIQHEWARFEAEKARWEAERAELQAQVAFLQGERKGQENLKTDLVRRIKM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 LEYALKQERAKYHKLKFGTDLNQGEKKADVSEQVSNGPVESVTLENSPLVWKEGRQLLRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LEYALKQERAKYHKLKFGTDLNQGEKKADVSEQVSNGPVESVTLENSPLVWKEGRQLLRQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 YLEEVGYTDTILDMRSKRVRSLLGRSLELNGAVEPSEGAPRAPPGPAGLSGGESLLVKQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YLEEVGYTDTILDMRSKRVRSLLGRSLELNGAVEPSEGAPRAPPGPAGLSGGESLLVKQI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 EEQIKRNAAGKDGKERLGGSVLGQIPFLQNCEDEDSDEDDELDSVQHKKQRVKLPSKALV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEQIKRNAAGKDGKERLGGSVLGQIPFLQNCEDEDSDEDDELDSVQHKKQRVKLPSKALV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 PEMEDEDEEDDSEDAINEFDFLGSGEDGEGAPDPRRCTVDGSPHELESRRVKLQGILADL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PEMEDEDEEDDSEDAINEFDFLGSGEDGEGAPDPRRCTVDGSPHELESRRVKLQGILADL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 RDVDGLPPKVTGPPPGTPQPRPHEGSFGFSSDVFIMDTIGGGEVSLGDLADLTVTNDNDL
::::::::::::::::::::::::
XP_016 RDVDGLPPKVTGPPPGTPQPRPHEAVILHLVLSPSLSLALYLFLCLSLSFSLSLALSAPP
370 380 390 400 410 420
>>XP_011525181 (OMIM: 614767) PREDICTED: striatin-4 isof (365 aa)
initn: 2464 init1: 2464 opt: 2464 Z-score: 1499.3 bits: 287.1 E(85289): 8.9e-77
Smith-Waterman score: 2464; 100.0% identity (100.0% similar) in 365 aa overlap (396-760:1-365)
370 380 390 400 410 420
pF1KB3 LPPKVTGPPPGTPQPRPHEGSFGFSSDVFIMDTIGGGEVSLGDLADLTVTNDNDLSCDLS
::::::::::::::::::::::::::::::
XP_011 MDTIGGGEVSLGDLADLTVTNDNDLSCDLS
10 20 30
430 440 450 460 470 480
pF1KB3 DSKDAFKKTWNPKFTLRSHYDGIRSLAFHHSQSALLTASEDGTLKLWNLQKAVTAKKNAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DSKDAFKKTWNPKFTLRSHYDGIRSLAFHHSQSALLTASEDGTLKLWNLQKAVTAKKNAA
40 50 60 70 80 90
490 500 510 520 530 540
pF1KB3 LDVEPIHAFRAHRGPVLAVAMGSNSEYCYSGGADACIHSWKIPDLSMDPYDGYDPSVLSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LDVEPIHAFRAHRGPVLAVAMGSNSEYCYSGGADACIHSWKIPDLSMDPYDGYDPSVLSH
100 110 120 130 140 150
550 560 570 580 590 600
pF1KB3 VLEGHGDAVWGLAFSPTSQRLASCSADGTVRIWDPSSSSPACLCTFPTASEHGVPTSVAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VLEGHGDAVWGLAFSPTSQRLASCSADGTVRIWDPSSSSPACLCTFPTASEHGVPTSVAF
160 170 180 190 200 210
610 620 630 640 650 660
pF1KB3 TSTEPAHIVASFRSGDTVLYDMEVGSALLTLESRGSSGPTQINQVVSHPNQPLTITAHDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TSTEPAHIVASFRSGDTVLYDMEVGSALLTLESRGSSGPTQINQVVSHPNQPLTITAHDD
220 230 240 250 260 270
670 680 690 700 710 720
pF1KB3 RGIRFLDNRTGKPVHSMVAHLDAVTCLAVDPNGAFLMSGSHDCSLRLWSLDNKTCVQEIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RGIRFLDNRTGKPVHSMVAHLDAVTCLAVDPNGAFLMSGSHDCSLRLWSLDNKTCVQEIT
280 290 300 310 320 330
730 740 750 760
pF1KB3 AHRKKHEEAIHAVACHPSKALIASAGADALAKVFV
:::::::::::::::::::::::::::::::::::
XP_011 AHRKKHEEAIHAVACHPSKALIASAGADALAKVFV
340 350 360
760 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 07:08:18 2016 done: Sat Nov 5 07:08:20 2016
Total Scan time: 14.260 Total Display time: 0.170
Function used was FASTA [36.3.4 Apr, 2011]