Result of FASTA (omim) for
pF1KB3558
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3558, 333 aa
1>>>pF1KB3558 333 - 333 aa - 333 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2993+/-0.000349; mu= 17.4488+/- 0.022
mean_var=99.1578+/-19.395, 0's: 0 Z-trim(117.9): 389 B-trim: 529 in 1/56
Lambda= 0.128799
statistics sampled from 29874 (30337) to 29874 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.716), E-opt: 0.2 (0.356), width: 16
Scan time: 8.050
The best scores are: opt bits E(85289)
NP_004905 (OMIM: 605662) ras-related protein Rab-3 ( 333) 2206 420.0 3.4e-117
XP_005261916 (OMIM: 605662) PREDICTED: ras-related ( 357) 1838 351.7 1.4e-96
XP_006724445 (OMIM: 605662) PREDICTED: ras-related ( 346) 1775 340.0 4.5e-93
XP_011528847 (OMIM: 605662) PREDICTED: ras-related ( 341) 1685 323.2 4.8e-88
XP_016884594 (OMIM: 605662) PREDICTED: ras-related ( 306) 1624 311.8 1.2e-84
XP_011528846 (OMIM: 605662) PREDICTED: ras-related ( 349) 1609 309.1 8.7e-84
XP_016884593 (OMIM: 605662) PREDICTED: ras-related ( 343) 1581 303.9 3.2e-82
XP_011528848 (OMIM: 605662) PREDICTED: ras-related ( 336) 1407 271.6 1.7e-72
XP_006724444 (OMIM: 605662) PREDICTED: ras-related ( 370) 1407 271.6 1.8e-72
XP_011528849 (OMIM: 605662) PREDICTED: ras-related ( 319) 1193 231.8 1.5e-60
NP_114140 (OMIM: 610917) ras-related protein Rab-3 ( 259) 983 192.7 7.4e-49
NP_001243206 (OMIM: 610917) ras-related protein Ra ( 259) 983 192.7 7.4e-49
NP_001138415 (OMIM: 610917) ras-related protein Ra ( 316) 984 192.9 7.4e-49
XP_011528852 (OMIM: 605662) PREDICTED: ras-related ( 235) 959 188.2 1.5e-47
NP_001138414 (OMIM: 610917) ras-related protein Ra ( 251) 905 178.2 1.7e-44
NP_001136096 (OMIM: 610917) ras-related protein Ra ( 308) 906 178.4 1.7e-44
NP_001243207 (OMIM: 610917) ras-related protein Ra ( 259) 856 169.1 9.4e-42
NP_001136097 (OMIM: 610917) ras-related protein Ra ( 268) 787 156.3 7e-38
NP_001243205 (OMIM: 610917) ras-related protein Ra ( 237) 745 148.4 1.4e-35
XP_011528854 (OMIM: 605662) PREDICTED: ras-related ( 188) 456 94.6 1.8e-19
XP_016884596 (OMIM: 605662) PREDICTED: ras-related ( 242) 453 94.2 3.1e-19
XP_016884595 (OMIM: 605662) PREDICTED: ras-related ( 244) 453 94.2 3.1e-19
NP_002861 (OMIM: 602672) ras-related protein Rab-1 ( 203) 415 87.0 3.7e-17
NP_899050 (OMIM: 201000,606144) ras-related protei ( 237) 405 85.2 1.5e-16
NP_001265597 (OMIM: 201000,606144) ras-related pro ( 237) 405 85.2 1.5e-16
NP_057361 (OMIM: 201000,606144) ras-related protei ( 237) 405 85.2 1.5e-16
NP_001265595 (OMIM: 201000,606144) ras-related pro ( 237) 405 85.2 1.5e-16
NP_001265596 (OMIM: 201000,606144) ras-related pro ( 237) 405 85.2 1.5e-16
NP_116235 (OMIM: 607466) ras-related protein Rab-2 ( 216) 400 84.2 2.7e-16
NP_004209 (OMIM: 604198) ras-related protein Rab-1 ( 218) 392 82.8 7.5e-16
NP_942599 (OMIM: 179513) ras-related protein Rab-6 ( 208) 390 82.4 9.4e-16
NP_002860 (OMIM: 179513) ras-related protein Rab-6 ( 208) 385 81.4 1.8e-15
NP_006852 (OMIM: 604199) ras-related protein Rab-3 ( 201) 382 80.9 2.6e-15
NP_057661 (OMIM: 615852) ras-related protein Rab-6 ( 208) 382 80.9 2.6e-15
NP_057238 (OMIM: 612945) ras-related protein Rab-4 ( 213) 382 80.9 2.7e-15
NP_112243 (OMIM: 612565) ras-related protein Rab-1 ( 201) 371 78.8 1.1e-14
NP_004152 (OMIM: 179508) ras-related protein Rab-1 ( 205) 370 78.7 1.2e-14
XP_011519340 (OMIM: 614178) PREDICTED: EF-hand cal ( 493) 373 79.6 1.5e-14
XP_011519339 (OMIM: 614178) PREDICTED: EF-hand cal ( 493) 373 79.6 1.5e-14
NP_057406 (OMIM: 612673) ras-related protein Rab-1 ( 215) 368 78.3 1.6e-14
NP_004654 (OMIM: 605570) ras-related protein Rab-1 ( 216) 367 78.1 1.9e-14
NP_001138430 (OMIM: 614178) EF-hand calcium-bindin ( 731) 373 79.8 2e-14
XP_011519338 (OMIM: 614178) PREDICTED: EF-hand cal ( 732) 373 79.8 2e-14
XP_006719084 (OMIM: 614178) PREDICTED: EF-hand cal ( 732) 373 79.8 2e-14
XP_011519336 (OMIM: 614178) PREDICTED: EF-hand cal ( 732) 373 79.8 2e-14
NP_002856 (OMIM: 179509) ras-related protein Rab-2 ( 212) 366 77.9 2.1e-14
NP_004569 (OMIM: 179511) ras-related protein Rab-4 ( 218) 364 77.6 2.8e-14
XP_011511195 (OMIM: 615852) PREDICTED: ras-related ( 195) 362 77.1 3.3e-14
NP_057614 (OMIM: 613532) ras-related protein Rab-8 ( 207) 362 77.2 3.5e-14
NP_001272988 (OMIM: 605693) ras-related protein Ra ( 203) 354 75.7 9.6e-14
>>NP_004905 (OMIM: 605662) ras-related protein Rab-36 [H (333 aa)
initn: 2206 init1: 2206 opt: 2206 Z-score: 2225.0 bits: 420.0 E(85289): 3.4e-117
Smith-Waterman score: 2206; 100.0% identity (100.0% similar) in 333 aa overlap (1-333:1-333)
10 20 30 40 50 60
pF1KB3 MVIAGASWMLGRAAASPTQTPPTTSTIRVARRSRVALVAMVIAAAGSGGPGRAEPQLSQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MVIAGASWMLGRAAASPTQTPPTTSTIRVARRSRVALVAMVIAAAGSGGPGRAEPQLSQP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 SLDCGRMRSSLTPLGPPVSRDRVIASFPKWYTPEACLQLREHFHGQVSAACQRRNTGTVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 SLDCGRMRSSLTPLGPPVSRDRVIASFPKWYTPEACLQLREHFHGQVSAACQRRNTGTVG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 LKLSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATIGVDFEIERFEIAGIPYSLQIWDTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 LKLSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATIGVDFEIERFEIAGIPYSLQIWDTA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 GQEKFKCIASAYYRGAQVIITAFDLTDVQTLEHTRQWLEDALRENEAGSCFIFLVGTKKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 GQEKFKCIASAYYRGAQVIITAFDLTDVQTLEHTRQWLEDALRENEAGSCFIFLVGTKKD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 LLSGAACEQAEADAVHLAREMQAEYWSVSAKTGENVKAFFSRVAALAFEQSVLQDLERQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 LLSGAACEQAEADAVHLAREMQAEYWSVSAKTGENVKAFFSRVAALAFEQSVLQDLERQS
250 260 270 280 290 300
310 320 330
pF1KB3 SARLQVGNGDLIQMEGSPPETQESKRPSSLGCC
:::::::::::::::::::::::::::::::::
NP_004 SARLQVGNGDLIQMEGSPPETQESKRPSSLGCC
310 320 330
>>XP_005261916 (OMIM: 605662) PREDICTED: ras-related pro (357 aa)
initn: 1837 init1: 1837 opt: 1838 Z-score: 1855.0 bits: 351.7 E(85289): 1.4e-96
Smith-Waterman score: 2148; 93.3% identity (93.3% similar) in 357 aa overlap (1-333:1-357)
10 20 30 40 50 60
pF1KB3 MVIAGASWMLGRAAASPTQTPPTTSTIRVARRSRVALVAMVIAAAGSGGPGRAEPQLSQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MVIAGASWMLGRAAASPTQTPPTTSTIRVARRSRVALVAMVIAAAGSGGPGRAEPQLSQP
10 20 30 40 50 60
70 80 90
pF1KB3 SL------------------------DCGRMRSSLTPLGPPVSRDRVIASFPKWYTPEAC
:: ::::::::::::::::::::::::::::::::::
XP_005 SLTGSRRPLPTLLPLPELCHASQPSKDCGRMRSSLTPLGPPVSRDRVIASFPKWYTPEAC
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB3 LQLREHFHGQVSAACQRRNTGTVGLKLSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LQLREHFHGQVSAACQRRNTGTVGLKLSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATI
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB3 GVDFEIERFEIAGIPYSLQIWDTAGQEKFKCIASAYYRGAQVIITAFDLTDVQTLEHTRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GVDFEIERFEIAGIPYSLQIWDTAGQEKFKCIASAYYRGAQVIITAFDLTDVQTLEHTRQ
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB3 WLEDALRENEAGSCFIFLVGTKKDLLSGAACEQAEADAVHLAREMQAEYWSVSAKTGENV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 WLEDALRENEAGSCFIFLVGTKKDLLSGAACEQAEADAVHLAREMQAEYWSVSAKTGENV
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB3 KAFFSRVAALAFEQSVLQDLERQSSARLQVGNGDLIQMEGSPPETQESKRPSSLGCC
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KAFFSRVAALAFEQSVLQDLERQSSARLQVGNGDLIQMEGSPPETQESKRPSSLGCC
310 320 330 340 350
>>XP_006724445 (OMIM: 605662) PREDICTED: ras-related pro (346 aa)
initn: 1775 init1: 1775 opt: 1775 Z-score: 1791.9 bits: 340.0 E(85289): 4.5e-93
Smith-Waterman score: 1775; 100.0% identity (100.0% similar) in 266 aa overlap (1-266:1-266)
10 20 30 40 50 60
pF1KB3 MVIAGASWMLGRAAASPTQTPPTTSTIRVARRSRVALVAMVIAAAGSGGPGRAEPQLSQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MVIAGASWMLGRAAASPTQTPPTTSTIRVARRSRVALVAMVIAAAGSGGPGRAEPQLSQP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 SLDCGRMRSSLTPLGPPVSRDRVIASFPKWYTPEACLQLREHFHGQVSAACQRRNTGTVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SLDCGRMRSSLTPLGPPVSRDRVIASFPKWYTPEACLQLREHFHGQVSAACQRRNTGTVG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 LKLSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATIGVDFEIERFEIAGIPYSLQIWDTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LKLSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATIGVDFEIERFEIAGIPYSLQIWDTA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 GQEKFKCIASAYYRGAQVIITAFDLTDVQTLEHTRQWLEDALRENEAGSCFIFLVGTKKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GQEKFKCIASAYYRGAQVIITAFDLTDVQTLEHTRQWLEDALRENEAGSCFIFLVGTKKD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 LLSGAACEQAEADAVHLAREMQAEYWSVSAKTGENVKAFFSRVAALAFEQSVLQDLERQS
::::::::::::::::::::::::::
XP_006 LLSGAACEQAEADAVHLAREMQAEYWREREGILQPRSRPGIRAVGAAGPGEAEQCPAPGR
250 260 270 280 290 300
>>XP_011528847 (OMIM: 605662) PREDICTED: ras-related pro (341 aa)
initn: 2066 init1: 1684 opt: 1685 Z-score: 1701.6 bits: 323.2 E(85289): 4.8e-88
Smith-Waterman score: 1995; 92.6% identity (92.9% similar) in 337 aa overlap (1-313:1-337)
10 20 30 40 50 60
pF1KB3 MVIAGASWMLGRAAASPTQTPPTTSTIRVARRSRVALVAMVIAAAGSGGPGRAEPQLSQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MVIAGASWMLGRAAASPTQTPPTTSTIRVARRSRVALVAMVIAAAGSGGPGRAEPQLSQP
10 20 30 40 50 60
70 80 90
pF1KB3 SL------------------------DCGRMRSSLTPLGPPVSRDRVIASFPKWYTPEAC
:: ::::::::::::::::::::::::::::::::::
XP_011 SLTGSRRPLPTLLPLPELCHASQPSKDCGRMRSSLTPLGPPVSRDRVIASFPKWYTPEAC
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB3 LQLREHFHGQVSAACQRRNTGTVGLKLSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LQLREHFHGQVSAACQRRNTGTVGLKLSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATI
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB3 GVDFEIERFEIAGIPYSLQIWDTAGQEKFKCIASAYYRGAQVIITAFDLTDVQTLEHTRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GVDFEIERFEIAGIPYSLQIWDTAGQEKFKCIASAYYRGAQVIITAFDLTDVQTLEHTRQ
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB3 WLEDALRENEAGSCFIFLVGTKKDLLSGAACEQAEADAVHLAREMQAEYWSVSAKTGENV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WLEDALRENEAGSCFIFLVGTKKDLLSGAACEQAEADAVHLAREMQAEYWSVSAKTGENV
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB3 KAFFSRVAALAFEQSVLQDLERQSSARLQVGNGDLIQMEGSPPETQESKRPSSLGCC
::::::::::::::::::::::::::::::::::::.
XP_011 KAFFSRVAALAFEQSVLQDLERQSSARLQVGNGDLIRGWHP
310 320 330 340
>>XP_016884594 (OMIM: 605662) PREDICTED: ras-related pro (306 aa)
initn: 2003 init1: 1624 opt: 1624 Z-score: 1641.0 bits: 311.8 E(85289): 1.2e-84
Smith-Waterman score: 1953; 91.9% identity (91.9% similar) in 333 aa overlap (1-333:1-306)
10 20 30 40 50 60
pF1KB3 MVIAGASWMLGRAAASPTQTPPTTSTIRVARRSRVALVAMVIAAAGSGGPGRAEPQLSQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MVIAGASWMLGRAAASPTQTPPTTSTIRVARRSRVALVAMVIAAAGSGGPGRAEPQLSQP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 SLDCGRMRSSLTPLGPPVSRDRVIASFPKWYTPEACLQLREHFHGQVSAACQRRNTGTVG
:: :::::::::::::::::::::::::::::::
XP_016 SL---------------------------WYTPEACLQLREHFHGQVSAACQRRNTGTVG
70 80 90
130 140 150 160 170 180
pF1KB3 LKLSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATIGVDFEIERFEIAGIPYSLQIWDTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LKLSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATIGVDFEIERFEIAGIPYSLQIWDTA
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB3 GQEKFKCIASAYYRGAQVIITAFDLTDVQTLEHTRQWLEDALRENEAGSCFIFLVGTKKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GQEKFKCIASAYYRGAQVIITAFDLTDVQTLEHTRQWLEDALRENEAGSCFIFLVGTKKD
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB3 LLSGAACEQAEADAVHLAREMQAEYWSVSAKTGENVKAFFSRVAALAFEQSVLQDLERQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLSGAACEQAEADAVHLAREMQAEYWSVSAKTGENVKAFFSRVAALAFEQSVLQDLERQS
220 230 240 250 260 270
310 320 330
pF1KB3 SARLQVGNGDLIQMEGSPPETQESKRPSSLGCC
:::::::::::::::::::::::::::::::::
XP_016 SARLQVGNGDLIQMEGSPPETQESKRPSSLGCC
280 290 300
>>XP_011528846 (OMIM: 605662) PREDICTED: ras-related pro (349 aa)
initn: 1633 init1: 1242 opt: 1609 Z-score: 1625.2 bits: 309.1 E(85289): 8.7e-84
Smith-Waterman score: 1927; 85.6% identity (86.9% similar) in 360 aa overlap (1-333:1-349)
10 20 30 40 50 60
pF1KB3 MVIAGASWMLGRAAASPTQTPPTTSTIRVARRSRVALVAMVIAAAGSGGPGRAEPQLSQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MVIAGASWMLGRAAASPTQTPPTTSTIRVARRSRVALVAMVIAAAGSGGPGRAEPQLSQP
10 20 30 40 50 60
70 80 90
pF1KB3 SL------------------------DCGRMRSSLTPLGPPVSRDRVIASFPKWYTPEAC
:: ::::::::::::::::::::::::::::::::::
XP_011 SLTGSRRPLPTLLPLPELCHASQPSKDCGRMRSSLTPLGPPVSRDRVIASFPKWYTPEAC
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB3 LQLREHFHGQVSAACQRRNTGTVGLKLSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LQLREHFHGQVSAACQRRNTGTVGLKLSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATI
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB3 GVDFEIERFEIAGIPYSLQIWDTAGQEKFKCIASAYYRGAQVIITAFDLTDVQTLEHTRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GVDFEIERFEIAGIPYSLQIWDTAGQEKFKCIASAYYRGAQVIITAFDLTDVQTLEHTRQ
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB3 WLEDALRENEAGSCFIFLVGTKKDLLSGAACEQAEADAVHLAREMQAE-YWSVSAK--TG
::::::::::::::::::::::::::. :..: :. : . ::
XP_011 WLEDALRENEAGSCFIFLVGTKKDLLGP-----------HVSRPKQTLCTWPGRCRPSTG
250 260 270 280
280 290 300 310 320 330
pF1KB3 ENVKAFFSRVAALAFEQSVLQDLERQSSARLQVGNGDLIQMEGSPPETQESKRPSSLGCC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ENVKAFFSRVAALAFEQSVLQDLERQSSARLQVGNGDLIQMEGSPPETQESKRPSSLGCC
290 300 310 320 330 340
>>XP_016884593 (OMIM: 605662) PREDICTED: ras-related pro (343 aa)
initn: 1581 init1: 1199 opt: 1581 Z-score: 1597.2 bits: 303.9 E(85289): 3.2e-82
Smith-Waterman score: 1581; 92.5% identity (94.0% similar) in 268 aa overlap (1-266:1-263)
10 20 30 40 50 60
pF1KB3 MVIAGASWMLGRAAASPTQTPPTTSTIRVARRSRVALVAMVIAAAGSGGPGRAEPQLSQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MVIAGASWMLGRAAASPTQTPPTTSTIRVARRSRVALVAMVIAAAGSGGPGRAEPQLSQP
10 20 30 40 50 60
70 80 90 100 110
pF1KB3 SLDCGRMR-SSLTPLGPPVSRDRVIASFP-KWYTPEACLQLREHFHGQVSAACQRRNTGT
:: .: .: :: : . . :: : ::::::::::::::::::::::::::::::
XP_016 SLTGSRRPLPTLLPL-PELCH----ASQPSKWYTPEACLQLREHFHGQVSAACQRRNTGT
70 80 90 100 110
120 130 140 150 160 170
pF1KB3 VGLKLSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATIGVDFEIERFEIAGIPYSLQIWD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VGLKLSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATIGVDFEIERFEIAGIPYSLQIWD
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB3 TAGQEKFKCIASAYYRGAQVIITAFDLTDVQTLEHTRQWLEDALRENEAGSCFIFLVGTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TAGQEKFKCIASAYYRGAQVIITAFDLTDVQTLEHTRQWLEDALRENEAGSCFIFLVGTK
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB3 KDLLSGAACEQAEADAVHLAREMQAEYWSVSAKTGENVKAFFSRVAALAFEQSVLQDLER
::::::::::::::::::::::::::::
XP_016 KDLLSGAACEQAEADAVHLAREMQAEYWREREGILQPRSRPGIRAVGAAGPGEAEQCPAP
240 250 260 270 280 290
>>XP_011528848 (OMIM: 605662) PREDICTED: ras-related pro (336 aa)
initn: 1406 init1: 1406 opt: 1407 Z-score: 1422.5 bits: 271.6 E(85289): 1.7e-72
Smith-Waterman score: 1717; 91.7% identity (91.7% similar) in 290 aa overlap (1-266:1-290)
10 20 30 40 50 60
pF1KB3 MVIAGASWMLGRAAASPTQTPPTTSTIRVARRSRVALVAMVIAAAGSGGPGRAEPQLSQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MVIAGASWMLGRAAASPTQTPPTTSTIRVARRSRVALVAMVIAAAGSGGPGRAEPQLSQP
10 20 30 40 50 60
70 80 90
pF1KB3 SL------------------------DCGRMRSSLTPLGPPVSRDRVIASFPKWYTPEAC
:: ::::::::::::::::::::::::::::::::::
XP_011 SLTGSRRPLPTLLPLPELCHASQPSKDCGRMRSSLTPLGPPVSRDRVIASFPKWYTPEAC
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB3 LQLREHFHGQVSAACQRRNTGTVGLKLSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LQLREHFHGQVSAACQRRNTGTVGLKLSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATI
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB3 GVDFEIERFEIAGIPYSLQIWDTAGQEKFKCIASAYYRGAQVIITAFDLTDVQTLEHTRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GVDFEIERFEIAGIPYSLQIWDTAGQEKFKCIASAYYRGAQVIITAFDLTDVQTLEHTRQ
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB3 WLEDALRENEAGSCFIFLVGTKKDLLSGAACEQAEADAVHLAREMQAEYWSVSAKTGENV
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WLEDALRENEAGSCFIFLVGTKKDLLSGAACEQAEADAVHLAREMQAEYWREREGILQPR
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB3 KAFFSRVAALAFEQSVLQDLERQSSARLQVGNGDLIQMEGSPPETQESKRPSSLGCC
XP_011 SRPGIRAVGAAGPGEAEQCPAPGRQWRPNPWLAPLA
310 320 330
>>XP_006724444 (OMIM: 605662) PREDICTED: ras-related pro (370 aa)
initn: 1406 init1: 1406 opt: 1407 Z-score: 1422.0 bits: 271.6 E(85289): 1.8e-72
Smith-Waterman score: 1717; 91.7% identity (91.7% similar) in 290 aa overlap (1-266:1-290)
10 20 30 40 50 60
pF1KB3 MVIAGASWMLGRAAASPTQTPPTTSTIRVARRSRVALVAMVIAAAGSGGPGRAEPQLSQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MVIAGASWMLGRAAASPTQTPPTTSTIRVARRSRVALVAMVIAAAGSGGPGRAEPQLSQP
10 20 30 40 50 60
70 80 90
pF1KB3 SL------------------------DCGRMRSSLTPLGPPVSRDRVIASFPKWYTPEAC
:: ::::::::::::::::::::::::::::::::::
XP_006 SLTGSRRPLPTLLPLPELCHASQPSKDCGRMRSSLTPLGPPVSRDRVIASFPKWYTPEAC
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB3 LQLREHFHGQVSAACQRRNTGTVGLKLSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LQLREHFHGQVSAACQRRNTGTVGLKLSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATI
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB3 GVDFEIERFEIAGIPYSLQIWDTAGQEKFKCIASAYYRGAQVIITAFDLTDVQTLEHTRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GVDFEIERFEIAGIPYSLQIWDTAGQEKFKCIASAYYRGAQVIITAFDLTDVQTLEHTRQ
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB3 WLEDALRENEAGSCFIFLVGTKKDLLSGAACEQAEADAVHLAREMQAEYWSVSAKTGENV
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 WLEDALRENEAGSCFIFLVGTKKDLLSGAACEQAEADAVHLAREMQAEYWREREGILQPR
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB3 KAFFSRVAALAFEQSVLQDLERQSSARLQVGNGDLIQMEGSPPETQESKRPSSLGCC
XP_006 SRPGIRAVGAAGPGEAEQCPAPGRQWRPNPNGRESARDPGEQEALQPGLLLTGACVEGLR
310 320 330 340 350 360
>>XP_011528849 (OMIM: 605662) PREDICTED: ras-related pro (319 aa)
initn: 1572 init1: 1193 opt: 1193 Z-score: 1207.9 bits: 231.8 E(85289): 1.5e-60
Smith-Waterman score: 1522; 89.8% identity (89.8% similar) in 266 aa overlap (1-266:1-239)
10 20 30 40 50 60
pF1KB3 MVIAGASWMLGRAAASPTQTPPTTSTIRVARRSRVALVAMVIAAAGSGGPGRAEPQLSQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MVIAGASWMLGRAAASPTQTPPTTSTIRVARRSRVALVAMVIAAAGSGGPGRAEPQLSQP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 SLDCGRMRSSLTPLGPPVSRDRVIASFPKWYTPEACLQLREHFHGQVSAACQRRNTGTVG
:: :::::::::::::::::::::::::::::::
XP_011 SL---------------------------WYTPEACLQLREHFHGQVSAACQRRNTGTVG
70 80 90
130 140 150 160 170 180
pF1KB3 LKLSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATIGVDFEIERFEIAGIPYSLQIWDTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LKLSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATIGVDFEIERFEIAGIPYSLQIWDTA
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB3 GQEKFKCIASAYYRGAQVIITAFDLTDVQTLEHTRQWLEDALRENEAGSCFIFLVGTKKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GQEKFKCIASAYYRGAQVIITAFDLTDVQTLEHTRQWLEDALRENEAGSCFIFLVGTKKD
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB3 LLSGAACEQAEADAVHLAREMQAEYWSVSAKTGENVKAFFSRVAALAFEQSVLQDLERQS
::::::::::::::::::::::::::
XP_011 LLSGAACEQAEADAVHLAREMQAEYWREREGILQPRSRPGIRAVGAAGPGEAEQCPAPGR
220 230 240 250 260 270
333 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 23:37:20 2016 done: Fri Nov 4 23:37:21 2016
Total Scan time: 8.050 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]