Result of FASTA (omim) for
pF1KB3561
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3561, 207 aa
1>>>pF1KB3561 207 - 207 aa - 207 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.3195+/-0.000481; mu= 7.7353+/- 0.029
mean_var=127.9801+/-26.893, 0's: 0 Z-trim(112.6): 128 B-trim: 429 in 1/50
Lambda= 0.113371
statistics sampled from 21491 (21620) to 21491 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.635), E-opt: 0.2 (0.253), width: 16
Scan time: 5.970
The best scores are: opt bits E(85289)
NP_001007069 (OMIM: 602217) syntenin-1 isoform 2 [ ( 292) 993 174.0 2.2e-43
NP_001007071 (OMIM: 602217) syntenin-1 isoform 3 [ ( 297) 993 174.0 2.2e-43
NP_001007070 (OMIM: 602217) syntenin-1 isoform 3 [ ( 297) 993 174.0 2.2e-43
NP_001007068 (OMIM: 602217) syntenin-1 isoform 1 [ ( 298) 993 174.0 2.2e-43
NP_005616 (OMIM: 602217) syntenin-1 isoform 1 [Hom ( 298) 993 174.0 2.2e-43
NP_001317466 (OMIM: 602217) syntenin-1 isoform 4 [ ( 318) 993 174.0 2.3e-43
XP_011515873 (OMIM: 602217) PREDICTED: syntenin-1 ( 318) 993 174.0 2.3e-43
XP_016869216 (OMIM: 602217) PREDICTED: syntenin-1 ( 319) 993 174.0 2.3e-43
NP_004877 (OMIM: 604262) amyloid beta A4 precursor ( 575) 232 49.8 1e-05
XP_005252025 (OMIM: 602414) PREDICTED: amyloid bet ( 826) 230 49.6 1.7e-05
XP_011516919 (OMIM: 602414) PREDICTED: amyloid bet ( 837) 230 49.6 1.7e-05
NP_001154 (OMIM: 602414) amyloid beta A4 precursor ( 837) 230 49.6 1.7e-05
XP_016870159 (OMIM: 602414) PREDICTED: amyloid bet ( 837) 230 49.6 1.7e-05
XP_011519798 (OMIM: 602712) PREDICTED: amyloid bet ( 441) 207 45.6 0.00015
XP_011519797 (OMIM: 602712) PREDICTED: amyloid bet ( 453) 207 45.6 0.00015
XP_016877606 (OMIM: 602712) PREDICTED: amyloid bet ( 737) 207 45.8 0.00021
XP_016877603 (OMIM: 602712) PREDICTED: amyloid bet ( 737) 207 45.8 0.00021
XP_016877604 (OMIM: 602712) PREDICTED: amyloid bet ( 737) 207 45.8 0.00021
XP_016877602 (OMIM: 602712) PREDICTED: amyloid bet ( 737) 207 45.8 0.00021
NP_001123886 (OMIM: 602712) amyloid beta A4 precur ( 737) 207 45.8 0.00021
XP_016877605 (OMIM: 602712) PREDICTED: amyloid bet ( 737) 207 45.8 0.00021
XP_011519795 (OMIM: 602712) PREDICTED: amyloid bet ( 739) 207 45.8 0.00021
XP_011519793 (OMIM: 602712) PREDICTED: amyloid bet ( 749) 207 45.8 0.00022
XP_011519790 (OMIM: 602712) PREDICTED: amyloid bet ( 749) 207 45.8 0.00022
XP_016877592 (OMIM: 602712) PREDICTED: amyloid bet ( 749) 207 45.8 0.00022
XP_016877591 (OMIM: 602712) PREDICTED: amyloid bet ( 749) 207 45.8 0.00022
XP_016877597 (OMIM: 602712) PREDICTED: amyloid bet ( 749) 207 45.8 0.00022
NP_005494 (OMIM: 602712) amyloid beta A4 precursor ( 749) 207 45.8 0.00022
XP_016877595 (OMIM: 602712) PREDICTED: amyloid bet ( 749) 207 45.8 0.00022
XP_016877598 (OMIM: 602712) PREDICTED: amyloid bet ( 749) 207 45.8 0.00022
XP_016877601 (OMIM: 602712) PREDICTED: amyloid bet ( 749) 207 45.8 0.00022
XP_016877590 (OMIM: 602712) PREDICTED: amyloid bet ( 749) 207 45.8 0.00022
XP_016877599 (OMIM: 602712) PREDICTED: amyloid bet ( 749) 207 45.8 0.00022
XP_016877593 (OMIM: 602712) PREDICTED: amyloid bet ( 749) 207 45.8 0.00022
XP_016877596 (OMIM: 602712) PREDICTED: amyloid bet ( 749) 207 45.8 0.00022
XP_011519791 (OMIM: 602712) PREDICTED: amyloid bet ( 749) 207 45.8 0.00022
XP_011519794 (OMIM: 602712) PREDICTED: amyloid bet ( 749) 207 45.8 0.00022
XP_016877600 (OMIM: 602712) PREDICTED: amyloid bet ( 749) 207 45.8 0.00022
XP_011519792 (OMIM: 602712) PREDICTED: amyloid bet ( 749) 207 45.8 0.00022
XP_016877594 (OMIM: 602712) PREDICTED: amyloid bet ( 749) 207 45.8 0.00022
>>NP_001007069 (OMIM: 602217) syntenin-1 isoform 2 [Homo (292 aa)
initn: 993 init1: 993 opt: 993 Z-score: 899.9 bits: 174.0 E(85289): 2.2e-43
Smith-Waterman score: 993; 66.0% identity (92.2% similar) in 206 aa overlap (1-206:86-291)
10 20 30
pF1KB3 MVAPVTGYSLGVRRAEIKPGVREIHLCKDE
::::::: ..:.:::::: :.::. ::::.
NP_001 NEEEIRANVAVVSGAPLQGQLVARPSSINYMVAPVTGNDVGIRRAEIKQGIREVILCKDQ
60 70 80 90 100 110
40 50 60 70 80 90
pF1KB3 RGKTGLRLRKVDQGLFVQLVQANTPASLVGLRFGDQLLQIDGRDCAGWSSHKAHQVVKKA
:: ::::...:.:.::::::::.::::::::::::.:::.:..:::::: :::.:.:.:
NP_001 DGKIGLRLKSIDNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQA
120 130 140 150 160 170
100 110 120 130 140 150
pF1KB3 SGDKIVVVVRDRPFQRTVTMHKDSMGHVGFVIKKGKIVSLVKGSSAARNGLLTNHYVCEV
:.::....:::::.::.:::::: :::::..:.:::.:.:: ::::::::::.: .::.
NP_001 FGEKITMTIRDRPFERTITMHKDSTGHVGFIFKNGKITSIVKDSSAARNGLLTEHNICEI
180 190 200 210 220 230
160 170 180 190 200
pF1KB3 DGQNVIGLKDKKIMEILATAGNVVTLTIIPSVIYEHMVKKLPPVLLHHTMDHSIPDA
.:::::::::..: .::.:.:.:::.::.:. :.::..:.. : ... :::.::.
NP_001 NGQNVIGLKDSQIADILSTSGTVVTITIMPAFIFEHIIKRMAPSIMKSLMDHTIPEV
240 250 260 270 280 290
>>NP_001007071 (OMIM: 602217) syntenin-1 isoform 3 [Homo (297 aa)
initn: 1013 init1: 993 opt: 993 Z-score: 899.8 bits: 174.0 E(85289): 2.2e-43
Smith-Waterman score: 993; 66.0% identity (92.2% similar) in 206 aa overlap (1-206:91-296)
10 20 30
pF1KB3 MVAPVTGYSLGVRRAEIKPGVREIHLCKDE
::::::: ..:.:::::: :.::. ::::.
NP_001 LNEEEIRANVAVVSGAPLQGLVARPSSINYMVAPVTGNDVGIRRAEIKQGIREVILCKDQ
70 80 90 100 110 120
40 50 60 70 80 90
pF1KB3 RGKTGLRLRKVDQGLFVQLVQANTPASLVGLRFGDQLLQIDGRDCAGWSSHKAHQVVKKA
:: ::::...:.:.::::::::.::::::::::::.:::.:..:::::: :::.:.:.:
NP_001 DGKIGLRLKSIDNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQA
130 140 150 160 170 180
100 110 120 130 140 150
pF1KB3 SGDKIVVVVRDRPFQRTVTMHKDSMGHVGFVIKKGKIVSLVKGSSAARNGLLTNHYVCEV
:.::....:::::.::.:::::: :::::..:.:::.:.:: ::::::::::.: .::.
NP_001 FGEKITMTIRDRPFERTITMHKDSTGHVGFIFKNGKITSIVKDSSAARNGLLTEHNICEI
190 200 210 220 230 240
160 170 180 190 200
pF1KB3 DGQNVIGLKDKKIMEILATAGNVVTLTIIPSVIYEHMVKKLPPVLLHHTMDHSIPDA
.:::::::::..: .::.:.:.:::.::.:. :.::..:.. : ... :::.::.
NP_001 NGQNVIGLKDSQIADILSTSGTVVTITIMPAFIFEHIIKRMAPSIMKSLMDHTIPEV
250 260 270 280 290
>>NP_001007070 (OMIM: 602217) syntenin-1 isoform 3 [Homo (297 aa)
initn: 1013 init1: 993 opt: 993 Z-score: 899.8 bits: 174.0 E(85289): 2.2e-43
Smith-Waterman score: 993; 66.0% identity (92.2% similar) in 206 aa overlap (1-206:91-296)
10 20 30
pF1KB3 MVAPVTGYSLGVRRAEIKPGVREIHLCKDE
::::::: ..:.:::::: :.::. ::::.
NP_001 LNEEEIRANVAVVSGAPLQGLVARPSSINYMVAPVTGNDVGIRRAEIKQGIREVILCKDQ
70 80 90 100 110 120
40 50 60 70 80 90
pF1KB3 RGKTGLRLRKVDQGLFVQLVQANTPASLVGLRFGDQLLQIDGRDCAGWSSHKAHQVVKKA
:: ::::...:.:.::::::::.::::::::::::.:::.:..:::::: :::.:.:.:
NP_001 DGKIGLRLKSIDNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQA
130 140 150 160 170 180
100 110 120 130 140 150
pF1KB3 SGDKIVVVVRDRPFQRTVTMHKDSMGHVGFVIKKGKIVSLVKGSSAARNGLLTNHYVCEV
:.::....:::::.::.:::::: :::::..:.:::.:.:: ::::::::::.: .::.
NP_001 FGEKITMTIRDRPFERTITMHKDSTGHVGFIFKNGKITSIVKDSSAARNGLLTEHNICEI
190 200 210 220 230 240
160 170 180 190 200
pF1KB3 DGQNVIGLKDKKIMEILATAGNVVTLTIIPSVIYEHMVKKLPPVLLHHTMDHSIPDA
.:::::::::..: .::.:.:.:::.::.:. :.::..:.. : ... :::.::.
NP_001 NGQNVIGLKDSQIADILSTSGTVVTITIMPAFIFEHIIKRMAPSIMKSLMDHTIPEV
250 260 270 280 290
>>NP_001007068 (OMIM: 602217) syntenin-1 isoform 1 [Homo (298 aa)
initn: 1013 init1: 993 opt: 993 Z-score: 899.8 bits: 174.0 E(85289): 2.2e-43
Smith-Waterman score: 993; 66.0% identity (92.2% similar) in 206 aa overlap (1-206:92-297)
10 20 30
pF1KB3 MVAPVTGYSLGVRRAEIKPGVREIHLCKDE
::::::: ..:.:::::: :.::. ::::.
NP_001 NEEEIRANVAVVSGAPLQGQLVARPSSINYMVAPVTGNDVGIRRAEIKQGIREVILCKDQ
70 80 90 100 110 120
40 50 60 70 80 90
pF1KB3 RGKTGLRLRKVDQGLFVQLVQANTPASLVGLRFGDQLLQIDGRDCAGWSSHKAHQVVKKA
:: ::::...:.:.::::::::.::::::::::::.:::.:..:::::: :::.:.:.:
NP_001 DGKIGLRLKSIDNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQA
130 140 150 160 170 180
100 110 120 130 140 150
pF1KB3 SGDKIVVVVRDRPFQRTVTMHKDSMGHVGFVIKKGKIVSLVKGSSAARNGLLTNHYVCEV
:.::....:::::.::.:::::: :::::..:.:::.:.:: ::::::::::.: .::.
NP_001 FGEKITMTIRDRPFERTITMHKDSTGHVGFIFKNGKITSIVKDSSAARNGLLTEHNICEI
190 200 210 220 230 240
160 170 180 190 200
pF1KB3 DGQNVIGLKDKKIMEILATAGNVVTLTIIPSVIYEHMVKKLPPVLLHHTMDHSIPDA
.:::::::::..: .::.:.:.:::.::.:. :.::..:.. : ... :::.::.
NP_001 NGQNVIGLKDSQIADILSTSGTVVTITIMPAFIFEHIIKRMAPSIMKSLMDHTIPEV
250 260 270 280 290
>>NP_005616 (OMIM: 602217) syntenin-1 isoform 1 [Homo sa (298 aa)
initn: 1013 init1: 993 opt: 993 Z-score: 899.8 bits: 174.0 E(85289): 2.2e-43
Smith-Waterman score: 993; 66.0% identity (92.2% similar) in 206 aa overlap (1-206:92-297)
10 20 30
pF1KB3 MVAPVTGYSLGVRRAEIKPGVREIHLCKDE
::::::: ..:.:::::: :.::. ::::.
NP_005 NEEEIRANVAVVSGAPLQGQLVARPSSINYMVAPVTGNDVGIRRAEIKQGIREVILCKDQ
70 80 90 100 110 120
40 50 60 70 80 90
pF1KB3 RGKTGLRLRKVDQGLFVQLVQANTPASLVGLRFGDQLLQIDGRDCAGWSSHKAHQVVKKA
:: ::::...:.:.::::::::.::::::::::::.:::.:..:::::: :::.:.:.:
NP_005 DGKIGLRLKSIDNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQA
130 140 150 160 170 180
100 110 120 130 140 150
pF1KB3 SGDKIVVVVRDRPFQRTVTMHKDSMGHVGFVIKKGKIVSLVKGSSAARNGLLTNHYVCEV
:.::....:::::.::.:::::: :::::..:.:::.:.:: ::::::::::.: .::.
NP_005 FGEKITMTIRDRPFERTITMHKDSTGHVGFIFKNGKITSIVKDSSAARNGLLTEHNICEI
190 200 210 220 230 240
160 170 180 190 200
pF1KB3 DGQNVIGLKDKKIMEILATAGNVVTLTIIPSVIYEHMVKKLPPVLLHHTMDHSIPDA
.:::::::::..: .::.:.:.:::.::.:. :.::..:.. : ... :::.::.
NP_005 NGQNVIGLKDSQIADILSTSGTVVTITIMPAFIFEHIIKRMAPSIMKSLMDHTIPEV
250 260 270 280 290
>>NP_001317466 (OMIM: 602217) syntenin-1 isoform 4 [Homo (318 aa)
initn: 1013 init1: 993 opt: 993 Z-score: 899.4 bits: 174.0 E(85289): 2.3e-43
Smith-Waterman score: 993; 66.0% identity (92.2% similar) in 206 aa overlap (1-206:112-317)
10 20 30
pF1KB3 MVAPVTGYSLGVRRAEIKPGVREIHLCKDE
::::::: ..:.:::::: :.::. ::::.
NP_001 LNEEEIRANVAVVSGAPLQGLVARPSSINYMVAPVTGNDVGIRRAEIKQGIREVILCKDQ
90 100 110 120 130 140
40 50 60 70 80 90
pF1KB3 RGKTGLRLRKVDQGLFVQLVQANTPASLVGLRFGDQLLQIDGRDCAGWSSHKAHQVVKKA
:: ::::...:.:.::::::::.::::::::::::.:::.:..:::::: :::.:.:.:
NP_001 DGKIGLRLKSIDNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQA
150 160 170 180 190 200
100 110 120 130 140 150
pF1KB3 SGDKIVVVVRDRPFQRTVTMHKDSMGHVGFVIKKGKIVSLVKGSSAARNGLLTNHYVCEV
:.::....:::::.::.:::::: :::::..:.:::.:.:: ::::::::::.: .::.
NP_001 FGEKITMTIRDRPFERTITMHKDSTGHVGFIFKNGKITSIVKDSSAARNGLLTEHNICEI
210 220 230 240 250 260
160 170 180 190 200
pF1KB3 DGQNVIGLKDKKIMEILATAGNVVTLTIIPSVIYEHMVKKLPPVLLHHTMDHSIPDA
.:::::::::..: .::.:.:.:::.::.:. :.::..:.. : ... :::.::.
NP_001 NGQNVIGLKDSQIADILSTSGTVVTITIMPAFIFEHIIKRMAPSIMKSLMDHTIPEV
270 280 290 300 310
>>XP_011515873 (OMIM: 602217) PREDICTED: syntenin-1 isof (318 aa)
initn: 1013 init1: 993 opt: 993 Z-score: 899.4 bits: 174.0 E(85289): 2.3e-43
Smith-Waterman score: 993; 66.0% identity (92.2% similar) in 206 aa overlap (1-206:112-317)
10 20 30
pF1KB3 MVAPVTGYSLGVRRAEIKPGVREIHLCKDE
::::::: ..:.:::::: :.::. ::::.
XP_011 NEEEIRANVAVVSGAPLQGQLVARPSSINYMVAPVTGNDVGIRRAEIKQGIREVILCKDQ
90 100 110 120 130 140
40 50 60 70 80 90
pF1KB3 RGKTGLRLRKVDQGLFVQLVQANTPASLVGLRFGDQLLQIDGRDCAGWSSHKAHQVVKKA
:: ::::...:.:.::::::::.::::::::::::.:::.:..:::::: :::.:.:.:
XP_011 DGKIGLRLKSIDNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQA
150 160 170 180 190 200
100 110 120 130 140 150
pF1KB3 SGDKIVVVVRDRPFQRTVTMHKDSMGHVGFVIKKGKIVSLVKGSSAARNGLLTNHYVCEV
:.::....:::::.::.:::::: :::::..:.:::.:.:: ::::::::::.: .::.
XP_011 FGEKITMTIRDRPFERTITMHKDSTGHVGFIFKNGKITSIVKDSSAARNGLLTEHNICEI
210 220 230 240 250 260
160 170 180 190 200
pF1KB3 DGQNVIGLKDKKIMEILATAGNVVTLTIIPSVIYEHMVKKLPPVLLHHTMDHSIPDA
.:::::::::..: .::.:.:.:::.::.:. :.::..:.. : ... :::.::.
XP_011 NGQNVIGLKDSQIADILSTSGTVVTITIMPAFIFEHIIKRMAPSIMKSLMDHTIPEV
270 280 290 300 310
>>XP_016869216 (OMIM: 602217) PREDICTED: syntenin-1 isof (319 aa)
initn: 1013 init1: 993 opt: 993 Z-score: 899.4 bits: 174.0 E(85289): 2.3e-43
Smith-Waterman score: 993; 66.0% identity (92.2% similar) in 206 aa overlap (1-206:113-318)
10 20 30
pF1KB3 MVAPVTGYSLGVRRAEIKPGVREIHLCKDE
::::::: ..:.:::::: :.::. ::::.
XP_016 NEEEIRANVAVVSGAPLQGQLVARPSSINYMVAPVTGNDVGIRRAEIKQGIREVILCKDQ
90 100 110 120 130 140
40 50 60 70 80 90
pF1KB3 RGKTGLRLRKVDQGLFVQLVQANTPASLVGLRFGDQLLQIDGRDCAGWSSHKAHQVVKKA
:: ::::...:.:.::::::::.::::::::::::.:::.:..:::::: :::.:.:.:
XP_016 DGKIGLRLKSIDNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQA
150 160 170 180 190 200
100 110 120 130 140 150
pF1KB3 SGDKIVVVVRDRPFQRTVTMHKDSMGHVGFVIKKGKIVSLVKGSSAARNGLLTNHYVCEV
:.::....:::::.::.:::::: :::::..:.:::.:.:: ::::::::::.: .::.
XP_016 FGEKITMTIRDRPFERTITMHKDSTGHVGFIFKNGKITSIVKDSSAARNGLLTEHNICEI
210 220 230 240 250 260
160 170 180 190 200
pF1KB3 DGQNVIGLKDKKIMEILATAGNVVTLTIIPSVIYEHMVKKLPPVLLHHTMDHSIPDA
.:::::::::..: .::.:.:.:::.::.:. :.::..:.. : ... :::.::.
XP_016 NGQNVIGLKDSQIADILSTSGTVVTITIMPAFIFEHIIKRMAPSIMKSLMDHTIPEV
270 280 290 300 310
>>NP_004877 (OMIM: 604262) amyloid beta A4 precursor pro (575 aa)
initn: 189 init1: 168 opt: 232 Z-score: 223.4 bits: 49.8 E(85289): 1e-05
Smith-Waterman score: 238; 29.7% identity (60.0% similar) in 185 aa overlap (22-196:393-575)
10 20 30 40
pF1KB3 MVAPVTGYSLGVRRAEIKPGVREIHLCKDERGKTGLRLRKVDQG---LFVQ
::.:: : .::. :: . :..: :.
NP_004 DPSQVGVHPSPGACHLHNGDLDHFSNSDNCREVHLEK-RRGE-GLGVALVESGWGSLLPT
370 380 390 400 410 420
50 60 70 80 90 100
pF1KB3 LVQANT----PASLVG-LRFGDQLLQIDGRDCAGWSSHKAHQVVKKA-SGDKIVVVVRDR
: :: :: : : .::.: :.: . .: . .:... : .... .
NP_004 AVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRETKSQTSVTLSIVHC
430 440 450 460 470 480
110 120 130 140 150 160
pF1KB3 PFQRTVTMHKD-SMGHVGFVIKKGKIVSLVKGSSAARNGLLTNHYVCEVDGQNVIGLKDK
: :. .:. . ..:: .. : : ::..:. : :.:. ..: . :..::.:..
NP_004 PPVTTAIIHRPHAREQLGFCVEDGIICSLLRGGIAERGGIRVGHRIIEINGQSVVATPHA
490 500 510 520 530 540
170 180 190 200
pF1KB3 KIMEILATAGNVVTLTIIPSVIYEHMVKKLPPVLLHHTMDHSIPDA
.:.:.:. : . : . .:.. :. .. . :: :
NP_004 RIIELLTEAYGEVHIKTMPAATYRLLTGQEQPVYL
550 560 570
>>XP_005252025 (OMIM: 602414) PREDICTED: amyloid beta A4 (826 aa)
initn: 182 init1: 182 opt: 230 Z-score: 219.7 bits: 49.6 E(85289): 1.7e-05
Smith-Waterman score: 230; 27.6% identity (64.1% similar) in 145 aa overlap (55-196:682-826)
30 40 50 60 70 80
pF1KB3 HLCKDERGKTGLRLRKVDQGLFVQLVQANTPASLVG-LRFGDQLLQIDGRDCAGWSSHKA
:: : : .:::...:.: . .:
XP_005 KGEILGVVIVESGWGSILPTVIIANMMHGGPAEKSGKLNIGDQIMSINGTSLVGLPLSTC
660 670 680 690 700 710
90 100 110 120 130 140
pF1KB3 HQVVK--KASGDKIVVVVRDRPFQRTVTMHKDSMGHVGFVIKKGKIVSLVKGSSAARNGL
....: : .. . .:: : .. . : ..:: ...: : ::..:. : :.:.
XP_005 QSIIKGLKNQSRVKLNIVRCPPVTTVLIRRPDLRYQLGFSVQNGIICSLMRGGIAERGGV
720 730 740 750 760 770
150 160 170 180 190 200
pF1KB3 LTNHYVCEVDGQNVIGLKDKKIMEILATAGNVVTLTIIPSVIYEHMVKKLPPVLLHHTMD
..: . :..::.:.. .::..::..: . . . .:...:. .. . :: .
XP_005 RVGHRIIEINGQSVVATPHEKIVHILSNAVGEIHMKTMPAAMYRLLTAQEQPVYI
780 790 800 810 820
pF1KB3 HSIPDA
207 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 02:36:24 2016 done: Fri Nov 4 02:36:25 2016
Total Scan time: 5.970 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]