Result of FASTA (omim) for pF1KB3657
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB3657, 360 aa
  1>>>pF1KB3657 360 - 360 aa - 360 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 16.9747+/-0.000768; mu= -44.9760+/- 0.045
 mean_var=857.9954+/-186.871, 0's: 0 Z-trim(112.2): 1435  B-trim: 0 in 0/53
 Lambda= 0.043786
 statistics sampled from 19331 (21057) to 19331 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.613), E-opt: 0.2 (0.247), width:  16
 Scan time:  7.450

The best scores are:                                      opt bits E(85289)
NP_001306 (OMIM: 600289) mitogen-activated protein ( 360) 2419 169.2 1.3e-41
NP_620581 (OMIM: 600289) mitogen-activated protein ( 360) 2322 163.0 9.2e-40
XP_011512612 (OMIM: 600289) PREDICTED: mitogen-act ( 401) 2051 146.0 1.4e-34
XP_016865789 (OMIM: 600289) PREDICTED: mitogen-act ( 328) 1885 135.4 1.7e-31
NP_002742 (OMIM: 602898) mitogen-activated protein ( 364) 1821 131.4 3.1e-30
XP_006715061 (OMIM: 600289) PREDICTED: mitogen-act ( 283) 1812 130.7 3.8e-30
NP_620582 (OMIM: 600289) mitogen-activated protein ( 297) 1788 129.2 1.1e-29
XP_016865790 (OMIM: 600289) PREDICTED: mitogen-act ( 301) 1788 129.2 1.1e-29
XP_016865788 (OMIM: 600289) PREDICTED: mitogen-act ( 328) 1788 129.3 1.2e-29
XP_016865793 (OMIM: 600289) PREDICTED: mitogen-act ( 258) 1618 118.4 1.7e-26
NP_620583 (OMIM: 600289) mitogen-activated protein ( 307) 1618 118.5   2e-26
NP_002960 (OMIM: 602399) mitogen-activated protein ( 367) 1597 117.3 5.7e-26
XP_016865791 (OMIM: 600289) PREDICTED: mitogen-act ( 273) 1541 113.6 5.3e-25
XP_016865792 (OMIM: 600289) PREDICTED: mitogen-act ( 270) 1536 113.3 6.5e-25
NP_002745 (OMIM: 602899) mitogen-activated protein ( 365) 1487 110.3   7e-24
XP_011529008 (OMIM: 602898) PREDICTED: mitogen-act ( 256) 1265 96.1   9e-20
NP_002736 (OMIM: 176948) mitogen-activated protein ( 360) 1081 84.7 3.6e-16
NP_620407 (OMIM: 176948) mitogen-activated protein ( 360) 1081 84.7 3.6e-16
NP_002737 (OMIM: 601795) mitogen-activated protein ( 379) 1071 84.0 5.9e-16
NP_001035145 (OMIM: 601795) mitogen-activated prot ( 357) 1012 80.3 7.4e-15
NP_620602 (OMIM: 602521) mitogen-activated protein ( 816) 1019 81.0   1e-14
NP_002740 (OMIM: 602521) mitogen-activated protein ( 816) 1019 81.0   1e-14
NP_620603 (OMIM: 602521) mitogen-activated protein ( 816) 1019 81.0   1e-14
NP_001290181 (OMIM: 602399) mitogen-activated prot ( 357)  958 76.9 7.9e-14
XP_016865131 (OMIM: 602896) PREDICTED: mitogen-act ( 378)  938 75.6   2e-13
XP_016865130 (OMIM: 602896) PREDICTED: mitogen-act ( 382)  938 75.6   2e-13
NP_620708 (OMIM: 602896) mitogen-activated protein ( 382)  938 75.6   2e-13
NP_620707 (OMIM: 602896) mitogen-activated protein ( 382)  938 75.6   2e-13
XP_016865127 (OMIM: 602896) PREDICTED: mitogen-act ( 424)  938 75.7 2.2e-13
NP_620709 (OMIM: 602896) mitogen-activated protein ( 424)  938 75.7 2.2e-13
NP_002743 (OMIM: 602896) mitogen-activated protein ( 424)  938 75.7 2.2e-13
XP_006714954 (OMIM: 602896) PREDICTED: mitogen-act ( 424)  938 75.7 2.2e-13
NP_620634 (OMIM: 601158) mitogen-activated protein ( 384)  928 75.0 3.1e-13
NP_001310254 (OMIM: 601158) mitogen-activated prot ( 384)  928 75.0 3.1e-13
NP_001310250 (OMIM: 601158) mitogen-activated prot ( 384)  928 75.0 3.1e-13
NP_001310259 (OMIM: 601158) mitogen-activated prot ( 427)  928 75.0 3.4e-13
NP_001310251 (OMIM: 601158) mitogen-activated prot ( 427)  928 75.0 3.4e-13
NP_001265476 (OMIM: 601158) mitogen-activated prot ( 427)  928 75.0 3.4e-13
NP_001310252 (OMIM: 601158) mitogen-activated prot ( 427)  928 75.0 3.4e-13
XP_016863929 (OMIM: 602897) PREDICTED: mitogen-act ( 384)  925 74.8 3.5e-13
XP_006714332 (OMIM: 602897) PREDICTED: mitogen-act ( 422)  925 74.9 3.8e-13
XP_016863916 (OMIM: 602897) PREDICTED: mitogen-act ( 426)  925 74.9 3.8e-13
XP_016863917 (OMIM: 602897) PREDICTED: mitogen-act ( 426)  925 74.9 3.8e-13
NP_001304996 (OMIM: 602897) mitogen-activated prot ( 464)  925 74.9 4.1e-13
XP_005263188 (OMIM: 602897) PREDICTED: mitogen-act ( 464)  925 74.9 4.1e-13
XP_016863923 (OMIM: 602897) PREDICTED: mitogen-act ( 384)  907 73.7 7.8e-13
XP_016863927 (OMIM: 602897) PREDICTED: mitogen-act ( 384)  907 73.7 7.8e-13
XP_016863928 (OMIM: 602897) PREDICTED: mitogen-act ( 384)  907 73.7 7.8e-13
XP_016863924 (OMIM: 602897) PREDICTED: mitogen-act ( 384)  907 73.7 7.8e-13
XP_016863926 (OMIM: 602897) PREDICTED: mitogen-act ( 384)  907 73.7 7.8e-13


>>NP_001306 (OMIM: 600289) mitogen-activated protein kin  (360 aa)
 initn: 2419 init1: 2419 opt: 2419  Z-score: 868.0  bits: 169.2 E(85289): 1.3e-41
Smith-Waterman score: 2419; 100.0% identity (100.0% similar) in 360 aa overlap (1-360:1-360)

               10        20        30        40        50        60
pF1KB3 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 TPPAYLINRMPSHEARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TPPAYLINRMPSHEARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB3 QALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEEMES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEEMES
              310       320       330       340       350       360

>>NP_620581 (OMIM: 600289) mitogen-activated protein kin  (360 aa)
 initn: 2322 init1: 2322 opt: 2322  Z-score: 834.9  bits: 163.0 E(85289): 9.2e-40
Smith-Waterman score: 2322; 96.1% identity (98.6% similar) in 360 aa overlap (1-360:1-360)

               10        20        30        40        50        60
pF1KB3 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTG
       :::::::::::::::::::::::::::::::::::::::::::::::::.::. :.::.:
NP_620 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 TPPAYLINRMPSHEARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA
       :: : :.... :. ::::::::::::::::::::::::::::::::::::::::::::::
NP_620 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB3 QALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEEMES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 QALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEEMES
              310       320       330       340       350       360

>>XP_011512612 (OMIM: 600289) PREDICTED: mitogen-activat  (401 aa)
 initn: 2050 init1: 2050 opt: 2051  Z-score: 741.7  bits: 146.0 E(85289): 1.4e-34
Smith-Waterman score: 2056; 90.7% identity (94.8% similar) in 345 aa overlap (25-360:57-401)

                     10        20         30                40     
pF1KB3       MSQERPTFYRQELNKTIWEVPERYQNLSP-VGSGAYGSVC--------AAFDTK
                                     :. :: . .:  ..::        ::::::
XP_011 APLLSVASSGRNFPRGRALLPLRALPVLHLQHPSPCTHAGMRSTVCSTQVRCESAAFDTK
         30        40        50        60        70        80      

          50        60        70        80        90       100     
pF1KB3 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV
         90       100       110       120       130       140      

         110       120       130       140       150       160     
pF1KB3 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK
        150       160       170       180       190       200      

         170       180       190       200       210       220     
pF1KB3 ILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG
        210       220       230       240       250       260      

         230       240       250       260       270       280     
pF1KB3 TDHINQLQQIMRLTGTPPAYLINRMPSHEARNYIQSLTQMPKMNFANVFIGANPLAVDLL
       ::::.::. :.::.::: : :.... :. :::::::::::::::::::::::::::::::
XP_011 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL
        270       280       290       300       310       320      

         290       300       310       320       330       340     
pF1KB3 EKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKSLTYDEV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKSLTYDEV
        330       340       350       360       370       380      

         350       360
pF1KB3 ISFVPPPLDQEEMES
       :::::::::::::::
XP_011 ISFVPPPLDQEEMES
        390       400 

>>XP_016865789 (OMIM: 600289) PREDICTED: mitogen-activat  (328 aa)
 initn: 1885 init1: 1885 opt: 1885  Z-score: 686.2  bits: 135.4 E(85289): 1.7e-31
Smith-Waterman score: 1885; 100.0% identity (100.0% similar) in 280 aa overlap (1-280:1-280)

               10        20        30        40        50        60
pF1KB3 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 TPPAYLINRMPSHEARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA
       ::::::::::::::::::::::::::::::::::::::::                    
XP_016 TPPAYLINRMPSHEARNYIQSLTQMPKMNFANVFIGANPLGSQSVAQPGELFYLLSCDPG
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB3 QALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEEMES
                                                                   
XP_016 KCQHSRDCPRHEGELGLHISCTQTEMQR                                
              310       320                                        

>>NP_002742 (OMIM: 602898) mitogen-activated protein kin  (364 aa)
 initn: 1821 init1: 1821 opt: 1821  Z-score: 663.8  bits: 131.4 E(85289): 3.1e-30
Smith-Waterman score: 1821; 73.2% identity (91.5% similar) in 351 aa overlap (1-351:1-351)

               10        20        30        40        50        60
pF1KB3 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ
       ::  :  :::::::::.::::.: :.: :::::::::::.:.:..   .:::::::::::
NP_002 MSGPRAGFYRQELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ
       :.:::.:::::::::::.::::::::::::::: :.:.:..::::: :::::::::::::
NP_002 SLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT
        :.:.:::::.::.:::::::::: ::::::::::.::::::::.::::::::..:.:::
NP_002 ALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTG
       ::::::::::::::::::::::::::::::::::::: :..::::.:.:.::..::...:
NP_002 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 TPPAYLINRMPSHEARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA
       ::   .. .. :..::.:::::  ::. .....: ::::::.::: .:::::::.:..::
NP_002 TPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB3 QALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEEMES
       .:::::::.:::::.::: :.:::.: :...  ..::: :::.::.:: ::         
NP_002 EALAHAYFSQYHDPEDEPEAEPYDESVEAKERTLEEWKELTYQEVLSFKPPEPPKPPGSL
              310       320       330       340       350       360

NP_002 EIEQ
           

>>XP_006715061 (OMIM: 600289) PREDICTED: mitogen-activat  (283 aa)
 initn: 1812 init1: 1812 opt: 1812  Z-score: 662.2  bits: 130.7 E(85289): 3.8e-30
Smith-Waterman score: 1812; 95.1% identity (98.2% similar) in 283 aa overlap (78-360:1-283)

        50        60        70        80        90       100       
pF1KB3 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH
                                     ::::::::::::::::::::::::::::::
XP_006                               MKHENVIGLLDVFTPARSLEEFNDVYLVTH
                                             10        20        30

       110       120       130       140       150       160       
pF1KB3 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKIL
               40        50        60        70        80        90

       170       180       190       200       210       220       
pF1KB3 DFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD
              100       110       120       130       140       150

       230       240       250       260       270       280       
pF1KB3 HINQLQQIMRLTGTPPAYLINRMPSHEARNYIQSLTQMPKMNFANVFIGANPLAVDLLEK
       ::.::. :.::.::: : :.... :. :::::::::::::::::::::::::::::::::
XP_006 HIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEK
              160       170       180       190       200       210

       290       300       310       320       330       340       
pF1KB3 MLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKSLTYDEVIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKSLTYDEVIS
              220       230       240       250       260       270

       350       360
pF1KB3 FVPPPLDQEEMES
       :::::::::::::
XP_006 FVPPPLDQEEMES
              280   

>>NP_620582 (OMIM: 600289) mitogen-activated protein kin  (297 aa)
 initn: 1788 init1: 1788 opt: 1788  Z-score: 653.7  bits: 129.2 E(85289): 1.1e-29
Smith-Waterman score: 1788; 95.0% identity (98.2% similar) in 280 aa overlap (1-280:1-280)

               10        20        30        40        50        60
pF1KB3 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTG
       :::::::::::::::::::::::::::::::::::::::::::::::::.::. :.::.:
NP_620 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 TPPAYLINRMPSHEARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA
       :: : :.... :. ::::::::::::::::::::::::::                    
NP_620 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLGKLTIYPHLMDIELVMI   
              250       260       270       280       290          

              310       320       330       340       350       360
pF1KB3 QALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEEMES

>>XP_016865790 (OMIM: 600289) PREDICTED: mitogen-activat  (301 aa)
 initn: 1788 init1: 1788 opt: 1788  Z-score: 653.6  bits: 129.2 E(85289): 1.1e-29
Smith-Waterman score: 1788; 95.0% identity (98.2% similar) in 280 aa overlap (1-280:1-280)

               10        20        30        40        50        60
pF1KB3 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTG
       :::::::::::::::::::::::::::::::::::::::::::::::::.::. :.::.:
XP_016 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 TPPAYLINRMPSHEARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA
       :: : :.... :. ::::::::::::::::::::::::::                    
XP_016 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLGSQSVAQPGELFYLLSCDPG
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB3 QALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEEMES
                                                                   
XP_016 K                                                           
                                                                   

>>XP_016865788 (OMIM: 600289) PREDICTED: mitogen-activat  (328 aa)
 initn: 1788 init1: 1788 opt: 1788  Z-score: 653.1  bits: 129.3 E(85289): 1.2e-29
Smith-Waterman score: 1788; 95.0% identity (98.2% similar) in 280 aa overlap (1-280:1-280)

               10        20        30        40        50        60
pF1KB3 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTG
       :::::::::::::::::::::::::::::::::::::::::::::::::.::. :.::.:
XP_016 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 TPPAYLINRMPSHEARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA
       :: : :.... :. ::::::::::::::::::::::::::                    
XP_016 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLGSQSVAQPGELFYLLSCDPG
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB3 QALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEEMES
                                                                   
XP_016 KCQHSRDCPRHEGELGLHISCTQTEMQR                                
              310       320                                        

>>XP_016865793 (OMIM: 600289) PREDICTED: mitogen-activat  (258 aa)
 initn: 1618 init1: 1618 opt: 1618  Z-score: 596.5  bits: 118.4 E(85289): 1.7e-26
Smith-Waterman score: 1618; 95.2% identity (98.4% similar) in 252 aa overlap (1-252:1-252)

               10        20        30        40        50        60
pF1KB3 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTG
       :::::::::::::::::::::::::::::::::::::::::::::::::.::. :.::.:
XP_016 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 TPPAYLINRMPSHEARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA
       :: : :.... :                                                
XP_016 TPGAELLKKISSESDAKP                                          
              250                                                  




360 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 13:35:16 2016 done: Thu Nov  3 13:35:17 2016
 Total Scan time:  7.450 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com