Result of FASTA (ccds) for
pF1KB3698
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3698, 375 aa
1>>>pF1KB3698 375 - 375 aa - 375 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.1782+/-0.000938; mu= 12.2416+/- 0.056
mean_var=135.0703+/-43.219, 0's: 0 Z-trim(106.4): 212 B-trim: 1150 in 2/46
Lambda= 0.110356
statistics sampled from 8541 (8950) to 8541 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.636), E-opt: 0.2 (0.275), width: 16
Scan time: 2.780
The best scores are: opt bits E(32554)
CCDS5322.1 GPER1 gene_id:2852|Hs108|chr7 ( 375) 2492 408.8 4.1e-114
CCDS2409.1 CXCR1 gene_id:3577|Hs108|chr2 ( 350) 488 89.7 4.3e-18
CCDS2684.1 CCR8 gene_id:1237|Hs108|chr3 ( 355) 476 87.8 1.6e-17
CCDS43069.1 CX3CR1 gene_id:1524|Hs108|chr3 ( 355) 476 87.8 1.6e-17
CCDS54571.1 CX3CR1 gene_id:1524|Hs108|chr3 ( 387) 476 87.8 1.7e-17
CCDS9412.1 CYSLTR2 gene_id:57105|Hs108|chr13 ( 346) 465 86.0 5.4e-17
CCDS2408.1 CXCR2 gene_id:3579|Hs108|chr2 ( 360) 464 85.9 6.2e-17
CCDS2656.1 CCR4 gene_id:1233|Hs108|chr3 ( 360) 438 81.7 1.1e-15
CCDS46813.1 CCR2 gene_id:729230|Hs108|chr3 ( 360) 430 80.5 2.6e-15
CCDS2737.1 CCR1 gene_id:1230|Hs108|chr3 ( 355) 423 79.3 5.7e-15
CCDS5298.1 CCR6 gene_id:1235|Hs108|chr6 ( 374) 419 78.7 9.1e-15
CCDS43078.1 CCR2 gene_id:729230|Hs108|chr3 ( 374) 414 77.9 1.6e-14
CCDS10429.1 SSTR5 gene_id:6755|Hs108|chr16 ( 364) 413 77.8 1.7e-14
CCDS14416.1 CXCR3 gene_id:2833|Hs108|chrX ( 368) 412 77.6 2e-14
CCDS48135.1 CXCR3 gene_id:2833|Hs108|chrX ( 415) 412 77.7 2.1e-14
CCDS54574.1 CCR3 gene_id:1232|Hs108|chr3 ( 376) 409 77.1 2.8e-14
CCDS3075.1 ACKR4 gene_id:51554|Hs108|chr3 ( 350) 408 76.9 2.9e-14
CCDS46420.1 CXCR4 gene_id:7852|Hs108|chr2 ( 352) 404 76.3 4.6e-14
CCDS2738.1 CCR3 gene_id:1232|Hs108|chr3 ( 355) 404 76.3 4.6e-14
CCDS33295.1 CXCR4 gene_id:7852|Hs108|chr2 ( 356) 404 76.3 4.6e-14
CCDS2148.1 GPR17 gene_id:2840|Hs108|chr2 ( 367) 401 75.9 6.6e-14
CCDS2739.1 CCR5 gene_id:1234|Hs108|chr3 ( 352) 395 74.9 1.2e-13
CCDS2735.1 CXCR6 gene_id:10663|Hs108|chr3 ( 342) 390 74.1 2.1e-13
CCDS8402.1 CXCR5 gene_id:643|Hs108|chr11 ( 372) 385 73.3 3.9e-13
CCDS8927.1 GPR182 gene_id:11318|Hs108|chr12 ( 404) 373 71.4 1.5e-12
CCDS2516.1 ACKR3 gene_id:57007|Hs108|chr2 ( 362) 368 70.6 2.5e-12
CCDS42856.1 SSTR4 gene_id:6754|Hs108|chr20 ( 388) 368 70.6 2.6e-12
CCDS14439.1 CYSLTR1 gene_id:10800|Hs108|chrX ( 337) 360 69.3 5.7e-12
CCDS2706.1 ACKR2 gene_id:1238|Hs108|chr3 ( 384) 359 69.2 7e-12
CCDS2931.1 GPR15 gene_id:2838|Hs108|chr3 ( 360) 355 68.5 1e-11
CCDS5321.1 GPR146 gene_id:115330|Hs108|chr7 ( 333) 350 67.7 1.7e-11
CCDS13556.1 OPRL1 gene_id:4987|Hs108|chr20 ( 370) 348 67.4 2.3e-11
CCDS11810.1 UTS2R gene_id:2837|Hs108|chr17 ( 389) 341 66.3 5.1e-11
CCDS33063.1 C5AR1 gene_id:728|Hs108|chr19 ( 350) 339 66.0 6e-11
CCDS77026.1 CCR7 gene_id:1236|Hs108|chr17 ( 372) 338 65.8 6.9e-11
CCDS11369.1 CCR7 gene_id:1236|Hs108|chr17 ( 378) 338 65.8 7e-11
CCDS56174.1 GPR35 gene_id:2859|Hs108|chr2 ( 340) 337 65.6 7.3e-11
CCDS9482.1 OXGR1 gene_id:27199|Hs108|chr13 ( 337) 335 65.3 9e-11
>>CCDS5322.1 GPER1 gene_id:2852|Hs108|chr7 (375 aa)
initn: 2492 init1: 2492 opt: 2492 Z-score: 2162.2 bits: 408.8 E(32554): 4.1e-114
Smith-Waterman score: 2492; 100.0% identity (100.0% similar) in 375 aa overlap (1-375:1-375)
10 20 30 40 50 60
pF1KB3 MDVTSQARGVGLEMYPGTAQPAAPNTTSPELNLSHPLLGTALANGTGELSEHQQYVIGLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 MDVTSQARGVGLEMYPGTAQPAAPNTTSPELNLSHPLLGTALANGTGELSEHQQYVIGLF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 LSCLYTIFLFPIGFVGNILILVVNISFREKMTIPDLYFINLAVADLILVADSLIEVFNLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 LSCLYTIFLFPIGFVGNILILVVNISFREKMTIPDLYFINLAVADLILVADSLIEVFNLH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 ERYYDIAVLCTFMSLFLQVNMYSSVFFLTWMSFDRYIALARAMRCSLFRTKHHARLSCGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 ERYYDIAVLCTFMSLFLQVNMYSSVFFLTWMSFDRYIALARAMRCSLFRTKHHARLSCGL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 IWMASVSATLVPFTAVHLQHTDEACFCFADVREVQWLEVTLGFIVPFAIIGLCYSLIVRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 IWMASVSATLVPFTAVHLQHTDEACFCFADVREVQWLEVTLGFIVPFAIIGLCYSLIVRV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 LVRAHRHRGLRPRRQKALRMILAVVLVFFVCWLPENVFISVHLLQRTQPGAAPCKQSFRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 LVRAHRHRGLRPRRQKALRMILAVVLVFFVCWLPENVFISVHLLQRTQPGAAPCKQSFRH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 AHPLTGHIVNLAAFSNSCLNPLIYSFLGETFRDKLRLYIEQKTNLPALNRFCHAALKAVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 AHPLTGHIVNLAAFSNSCLNPLIYSFLGETFRDKLRLYIEQKTNLPALNRFCHAALKAVI
310 320 330 340 350 360
370
pF1KB3 PDSTEQSDVRFSSAV
:::::::::::::::
CCDS53 PDSTEQSDVRFSSAV
370
>>CCDS2409.1 CXCR1 gene_id:3577|Hs108|chr2 (350 aa)
initn: 448 init1: 166 opt: 488 Z-score: 438.3 bits: 89.7 E(32554): 4.3e-18
Smith-Waterman score: 488; 31.6% identity (65.8% similar) in 275 aa overlap (68-332:48-313)
40 50 60 70 80 90
pF1KB3 LGTALANGTGELSEHQQYVIGLFLSCLYTIFLFPIGFVGNILILVVNISFREKMTIPDLY
..: ....:: :...: . : .. :.:
CCDS24 TGMPPADEDYSPCMLETETLNKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVY
20 30 40 50 60 70
100 110 120 130 140 150
pF1KB3 FINLAVADLILVADSLIEVFNLHERYYDIAVLCTFMSLFLQVNMYSSVFFLTWMSFDRYI
..:::.:::... : . . . . . :: .::. .::.::....:. .: :::.
CCDS24 LLNLALADLLFALTLPIWAASKVNGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYL
80 90 100 110 120 130
160 170 180 190 200 210
pF1KB3 ALARAMRCSLFRTKHHARLSCGLIWMASVSATLVPF----TAVHLQHTDEACFCFADVRE
:...: : .: . .: ... : : :.. .: :: : : .... .:.
CCDS24 AIVHATR-TLTQKRHLVKFVCLGCWGLSMNLSL-PFFLFRQAYHPNNSSPVCYEVLGNDT
140 150 160 170 180 190
220 230 240 250 260
pF1KB3 VQWLEV------TLGFIVPFAIIGLCYSLIVRVLVRAHRHRGLRPRRQKALRMILAVVLV
..: : :.:::::. .. .::.. .:.: .:: . ...:.:.:.::::.
CCDS24 AKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAHMGQ-----KHRAMRVIFAVVLI
200 210 220 230 240 250
270 280 290 300 310 320
pF1KB3 FFVCWLPENVFISVHLLQRTQPGAAPCKQSFRHAHPLTGHIVNLAAFSNSCLNPLIYSFL
:..:::: :. . . :.::: :.. .. : . ... .: .:::::.::.:.
CCDS24 FLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDA--TEILGFLHSCLNPIIYAFI
260 270 280 290 300
330 340 350 360 370
pF1KB3 GETFRDKLRLYIEQKTNLPALNRFCHAALKAVIPDSTEQSDVRFSSAV
:..::
CCDS24 GQNFRHGFLKILAMHGLVSKEFLARHRVTSYTSSSVNVSSNL
310 320 330 340 350
>>CCDS2684.1 CCR8 gene_id:1237|Hs108|chr3 (355 aa)
initn: 308 init1: 308 opt: 476 Z-score: 427.9 bits: 87.8 E(32554): 1.6e-17
Smith-Waterman score: 476; 29.4% identity (63.4% similar) in 303 aa overlap (59-349:36-324)
30 40 50 60 70 80
pF1KB3 PELNLSHPLLGTALANGTGELSEHQQYVIGLFLSCLYTIFLFPIGFVGNILILVVNISFR
:.:. .: . :: ....:: :...: . .
CCDS26 DLSVTTVTDYYYPDIFSSPCDAELIQTNGKLLLAVFYCL-LFVFSLLGNSLVILVLVVCK
10 20 30 40 50 60
90 100 110 120 130 140
pF1KB3 EKMTIPDLYFINLAVADLILVADSLIEVFNLHERYYDIAVLCTFMSLFLQVNMYSSVFFL
. .: :.:..:::..::..: . .... : ... .:.: .: : ...:::.::.
CCDS26 KLRSITDVYLLNLALSDLLFVFSFPFQTYYLLDQWVFGTVMCKVVSGFYYIGFYSSMFFI
70 80 90 100 110 120
150 160 170 180 190 200
pF1KB3 TWMSFDRYIALARAMRCSLFRTKHHARLSCGLIWMASVSATLVPFTAVHLQHTDEA---C
: :: :::.:...:. :: . . : .:.... :: .:. . . .... :
CCDS26 TLMSVDRYLAVVHAVYALKVRTIRMGTTLCLAVWLTAIMAT-IPLLVFYQVASEDGVLQC
130 140 150 160 170 180
210 220 230 240 250
pF1KB3 FCFADVREVQWLEVT------LGFIVPFAIIGLCYSLIVRVLVRAHRHRGLRPRRQKALR
. : . . ..: : ::...::.:. .:: :.. : : . : . ::.:
CCDS26 YSFYNQQTLKWKIFTNFKMNILGLLIPFTIFMFCYIKILHQLKRCQNHN-----KTKAIR
190 200 210 220 230
260 270 280 290 300 310
pF1KB3 MILAVVLVFFVCWLPENVFI---SVHLLQRTQPGAAPCKQSFRHAHPLTGHIVNLAAFSN
..: ::.. .. :.: :: . :.: .. : : :. . . :.... .:..
CCDS26 LVLIVVIASLLFWVPFNVVLFLTSLHSMH-ILDG---C--SISQQLTYATHVTEIISFTH
240 250 260 270 280 290
320 330 340 350 360 370
pF1KB3 SCLNPLIYSFLGETFRDKLRLYIEQKTNLPALNRFCHAALKAVIPDSTEQSDVRFSSAV
:.::.::.:.:: :. .: : ::. .:
CCDS26 CCVNPVIYAFVGEKFKKHLS-EIFQKSCSQIFNYLGRQMPRESCEKSSSCQQHSSRSSSV
300 310 320 330 340 350
CCDS26 DYIL
>>CCDS43069.1 CX3CR1 gene_id:1524|Hs108|chr3 (355 aa)
initn: 383 init1: 244 opt: 476 Z-score: 427.9 bits: 87.8 E(32554): 1.6e-17
Smith-Waterman score: 476; 33.4% identity (64.2% similar) in 296 aa overlap (56-338:28-308)
30 40 50 60 70 80
pF1KB3 TTSPELNLSHPLLGTALANGTGELSEHQQYVIG-LFLSCLYTIFLFPIGFVGNILILVVN
:.: .::: .:.. .: ::.:::.:.. .
CCDS43 MDQFPESVTENFEYDDLAEACYIGDIVVFGTVFLSIFYSV-IFAIGLVGNLLVVFAL
10 20 30 40 50
90 100 110 120 130 140
pF1KB3 ISFREKMTIPDLYFINLAVADLILVAD-SLIEVFNLHERYYDIAVLCTFMSLFLQVNMYS
. .. .. :.:..:::..::..:: . . ..:. : .: : . :. .....
CCDS43 TNSKKPKSVTDIYLLNLALSDLLFVATLPFWTHYLINEKGLHNA-MCKFTTAFFFIGFFG
60 70 80 90 100 110
150 160 170 180 190 200
pF1KB3 SVFFLTWMSFDRYIALARAMRCSLFRT-KHHARLSCGLIWMASVSATLVPFTAVHLQHTD
:.::.: .:.:::.:.. : :: .: . .: : .: :.. .. : .. :. .
CCDS43 SIFFITVISIDRYLAIVLAANSMNNRTVQHGVTISLG-VWAAAILVAAPQFMFTK-QKEN
120 130 140 150 160 170
210 220 230 240 250
pF1KB3 EACFCFADVREVQ---W-----LEVT-LGFIVPFAIIGLCYSLIVRVLVRAHRHRGLRPR
: :..: :: : .:.. :::..:. :.. :: :...: . :.
CCDS43 E---CLGDYPEVLQEIWPVLRNVETNFLGFLLPLLIMSYCYFRIIQTLFSCKNHK-----
180 190 200 210 220
260 270 280 290 300 310
pF1KB3 RQKALRMILAVVLVFFVCWLPENVFISVHLLQRTQPGAAPCKQSFRHAHPLTGHIVNLAA
. ::...:: ::.:::. : : ::.: .. : . : ..:. :. ... .:
CCDS43 KAKAIKLILLVVIVFFLFWTPYNVMIFLETL-KLYDFFPSC--DMRKDLRLALSVTETVA
230 240 250 260 270 280
320 330 340 350 360 370
pF1KB3 FSNSCLNPLIYSFLGETFRDKL-RLYIEQKTNLPALNRFCHAALKAVIPDSTEQSDVRFS
::. :::::::.: :: :: : .::
CCDS43 FSHCCLNPLIYAFAGEKFRRYLYHLYGKCLAVLCGRSVHVDFSSSESQRSRHGSVLSSNF
290 300 310 320 330 340
>>CCDS54571.1 CX3CR1 gene_id:1524|Hs108|chr3 (387 aa)
initn: 383 init1: 244 opt: 476 Z-score: 427.4 bits: 87.8 E(32554): 1.7e-17
Smith-Waterman score: 476; 33.4% identity (64.2% similar) in 296 aa overlap (56-338:60-340)
30 40 50 60 70 80
pF1KB3 TTSPELNLSHPLLGTALANGTGELSEHQQYVIG-LFLSCLYTIFLFPIGFVGNILILVVN
:.: .::: .:.. .: ::.:::.:.. .
CCDS54 AFTMDQFPESVTENFEYDDLAEACYIGDIVVFGTVFLSIFYSV-IFAIGLVGNLLVVFAL
30 40 50 60 70 80
90 100 110 120 130 140
pF1KB3 ISFREKMTIPDLYFINLAVADLILVAD-SLIEVFNLHERYYDIAVLCTFMSLFLQVNMYS
. .. .. :.:..:::..::..:: . . ..:. : .: : . :. .....
CCDS54 TNSKKPKSVTDIYLLNLALSDLLFVATLPFWTHYLINEKGLHNA-MCKFTTAFFFIGFFG
90 100 110 120 130 140
150 160 170 180 190 200
pF1KB3 SVFFLTWMSFDRYIALARAMRCSLFRT-KHHARLSCGLIWMASVSATLVPFTAVHLQHTD
:.::.: .:.:::.:.. : :: .: . .: : .: :.. .. : .. :. .
CCDS54 SIFFITVISIDRYLAIVLAANSMNNRTVQHGVTISLG-VWAAAILVAAPQFMFTK-QKEN
150 160 170 180 190 200
210 220 230 240 250
pF1KB3 EACFCFADVREVQ---W-----LEVT-LGFIVPFAIIGLCYSLIVRVLVRAHRHRGLRPR
: :..: :: : .:.. :::..:. :.. :: :...: . :.
CCDS54 E---CLGDYPEVLQEIWPVLRNVETNFLGFLLPLLIMSYCYFRIIQTLFSCKNHK-----
210 220 230 240 250
260 270 280 290 300 310
pF1KB3 RQKALRMILAVVLVFFVCWLPENVFISVHLLQRTQPGAAPCKQSFRHAHPLTGHIVNLAA
. ::...:: ::.:::. : : ::.: .. : . : ..:. :. ... .:
CCDS54 KAKAIKLILLVVIVFFLFWTPYNVMIFLETL-KLYDFFPSC--DMRKDLRLALSVTETVA
260 270 280 290 300 310
320 330 340 350 360 370
pF1KB3 FSNSCLNPLIYSFLGETFRDKL-RLYIEQKTNLPALNRFCHAALKAVIPDSTEQSDVRFS
::. :::::::.: :: :: : .::
CCDS54 FSHCCLNPLIYAFAGEKFRRYLYHLYGKCLAVLCGRSVHVDFSSSESQRSRHGSVLSSNF
320 330 340 350 360 370
>>CCDS9412.1 CYSLTR2 gene_id:57105|Hs108|chr13 (346 aa)
initn: 377 init1: 151 opt: 465 Z-score: 418.6 bits: 86.0 E(32554): 5.4e-17
Smith-Waterman score: 465; 31.1% identity (66.4% similar) in 289 aa overlap (60-336:40-317)
30 40 50 60 70 80
pF1KB3 ELNLSHPLLGTALANGTGELSEHQQYVIGLFLSCLYTIFLFPIGFVGNILILVVNISFRE
:. .: :..: : .:: : . : .. .
CCDS94 PSISVSEMEPNGTFSNNNSRNCTIENFKREFFPIVYLIIFF-WGVLGNGLSIYVFLQPYK
10 20 30 40 50 60
90 100 110 120 130 140
pF1KB3 KMTIPDLYFINLAVADLILVADSLIEVFNLHER-----YYDIAVLCTFMSLFLQVNMYSS
: : .....:::..::.... .: . . : . :.: : .:: : ::::::
CCDS94 KSTSVNVFMLNLAISDLLFIS-TLPFRADYYLRGSNWIFGDLA--CRIMSYSLYVNMYSS
70 80 90 100 110 120
150 160 170 180 190 200
pF1KB3 VFFLTWMSFDRYIALARAMRCSLFRTKHHARLSCGLIWMASVSATLVPFTAVHLQHTD-E
..::: .: :..:... .: . . : . ::.::. ...... . . :. .
CCDS94 IYFLTVLSVVRFLAMVHPFRLLHVTSIRSAWILCGIIWILIMASSIMLLDSGSEQNGSVT
130 140 150 160 170 180
210 220 230 240 250
pF1KB3 AC-----FCFADVREVQWLEVTLGFIVPFAIIGLCYSLIVRVLVRAHR-HRGLRPRRQKA
.: . .: .. .... ...: ..:: ...:: ::.:::.... . ::: ..::
CCDS94 SCLELNLYKIAKLQTMNYIALVVGCLLPFFTLSICYLLIIRVLLKVEVPESGLRVSHRKA
190 200 210 220 230 240
260 270 280 290 300 310
pF1KB3 LRMILAVVLVFFVCWLPENVFISVHLLQRTQPGAAPCKQSFRHAHPLTGHIVNLAAFSNS
: :. ....::.:.:: ... .::: : .. ::. ...: .: . ::: .:.
CCDS94 LTTIIITLIIFFLCFLPYHTLRTVHL---TTWKVGLCKDRLHKALVIT---LALAA-ANA
250 260 270 280 290
320 330 340 350 360 370
pF1KB3 CLNPLIYSFLGETFRDKLRLYIEQKTNLPALNRFCHAALKAVIPDSTEQSDVRFSSAV
:.:::.: : ::.:.:.:.
CCDS94 CFNPLLYYFAGENFKDRLKSALRKGHPQKAKTKCVFPVSVWLRKETRV
300 310 320 330 340
>>CCDS2408.1 CXCR2 gene_id:3579|Hs108|chr2 (360 aa)
initn: 456 init1: 176 opt: 464 Z-score: 417.5 bits: 85.9 E(32554): 6.2e-17
Smith-Waterman score: 464; 31.1% identity (64.7% similar) in 286 aa overlap (60-335:50-325)
30 40 50 60 70 80
pF1KB3 ELNLSHPLLGTALANGTGELSEHQQYVIGLFLSCLYTIFLFPIGFVGNILILVVNISFRE
:. .:.. .: ....:: :...: . :
CCDS24 LSNYSYSSTLPPFLLDAAPCEPESLEINKYFVVIIYAL-VFLLSLLGNSLVMLVILYSRV
20 30 40 50 60 70
90 100 110 120 130 140
pF1KB3 KMTIPDLYFINLAVADLILVADSLIEVFNLHERYYDIAVLCTFMSLFLQVNMYSSVFFLT
.. :.:..:::.:::... : . . . . . :: .::. .::.::....:.
CCDS24 GRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCKVVSLLKEVNFYSGILLLA
80 90 100 110 120 130
150 160 170 180 190 200
pF1KB3 WMSFDRYIALARAMRCSLFRTKHHARLSCGLIWMASVSATLVPFT----AVHLQHTDEAC
.: :::.:...: : .: . .. ... : :: :. .: : .:. .... ::
CCDS24 CISVDRYLAIVHATR-TLTQKRYLVKFICLSIWGLSLLLAL-PVLLFRRTVYSSNVSPAC
140 150 160 170 180 190
210 220 230 240 250
pF1KB3 FCFADVREVQW------LEVTLGFIVPFAIIGLCYSLIVRVLVRAHRHRGLRPRRQKALR
. ..: : ..:::::. :. .::.. .:.: .:: . ...:.:
CCDS24 YEDMGNNTANWRMLLRILPQSFGFIVPLLIMLFCYGFTLRTLFKAHMGQ-----KHRAMR
200 210 220 230 240 250
260 270 280 290 300 310
pF1KB3 MILAVVLVFFVCWLPENVFISVHLLQRTQPGAAPCKQSFRHAHPLTGHIVNLAAFSNSCL
.:.::::.:..:::: :. . . :.::: :.. :. . ... .. .:::
CCDS24 VIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQETCER--RNHIDRALDATEILGILHSCL
260 270 280 290 300
320 330 340 350 360 370
pF1KB3 NPLIYSFLGETFRDKLRLYIEQKTNLPALNRFCHAALKAVIPDSTEQSDVRFSSAV
:::::.:.:. :: :
CCDS24 NPLIYAFIGQKFRHGLLKILAIHGLISKDSLPKDSRPSFVGSSSGHTSTTL
310 320 330 340 350 360
>>CCDS2656.1 CCR4 gene_id:1233|Hs108|chr3 (360 aa)
initn: 204 init1: 204 opt: 438 Z-score: 395.1 bits: 81.7 E(32554): 1.1e-15
Smith-Waterman score: 438; 28.4% identity (63.4% similar) in 303 aa overlap (59-352:40-332)
30 40 50 60 70 80
pF1KB3 PELNLSHPLLGTALANGTGELSEHQQYVIGLFLSCLYTIFLFPIGFVGNILILVVNISFR
::: ::.. .: .:..:: ....: ....
CCDS26 TLDESIYSNYYLYESIPKPCTKEGIKAFGELFLPPLYSL-VFVFGLLGNSVVVLVLFKYK
10 20 30 40 50 60
90 100 110 120 130 140
pF1KB3 EKMTIPDLYFINLAVADLILVADSLIEVFNLHERYYDIAVLCTFMSLFLQVNMYSSVFFL
. .. :.:..:::..::..: . . . ... :: ..: . :..::..::.
CCDS26 RLRSMTDVYLLNLAISDLLFVFSLPFWGYYAADQWVFGLGLCKMISWMYLVGFYSGIFFV
70 80 90 100 110 120
150 160 170 180 190 200
pF1KB3 TWMSFDRYIALARAMRCSLFRTKHHARLSCGLIWMASVSATLVP---FTAVHLQHTDEAC
::.:::.:...:. :: .. .. : ..: :.: : :.. . ... :
CCDS26 MLMSIDRYLAIVHAVFSLRARTLTYGVITSLATWSVAVFASL-PGFLFSTCYTERNHTYC
130 140 150 160 170 180
210 220 230 240 250
pF1KB3 FCFADVREVQW-----LEVT-LGFIVPFAIIGLCYSLIVRVLVRAHRHRGLRPRRQKALR
.. . : ::.. ::...:..:. .:::.:.:.: . . .. ..::..
CCDS26 KTKYSLNSTTWKVLSSLEINILGLVIPLGIMLFCYSMIIRTLQHCKNEK-----KNKAVK
190 200 210 220 230 240
260 270 280 290 300 310
pF1KB3 MILAVVLVFFVCWLPENVFISVHLLQRTQPGAAPCKQSFRHAHPLTGHIVNLAAFSNSCL
::.:::..:. : : :. . .. : . . : .:.. . . .. :: . ::
CCDS26 MIFAVVVLFLGFWTPYNIVLFLETLVELEV-LQDC--TFERYLDYAIQATETLAFVHCCL
250 260 270 280 290
320 330 340 350 360 370
pF1KB3 NPLIYSFLGETFRDKLRLYIEQKTNLPALNRFCHAALKAVIPDSTEQSDVRFSSAV
::.:: :::: :: . .. .: .: ..:
CCDS26 NPIIYFFLGEKFRKYILQLFKTCRGLFVLCQYCGLLQIYSADTPSSSYTQSTMDHDLHDA
300 310 320 330 340 350
CCDS26 L
360
>>CCDS46813.1 CCR2 gene_id:729230|Hs108|chr3 (360 aa)
initn: 308 init1: 181 opt: 430 Z-score: 388.2 bits: 80.5 E(32554): 2.6e-15
Smith-Waterman score: 430; 24.1% identity (65.9% similar) in 299 aa overlap (60-352:44-329)
30 40 50 60 70 80
pF1KB3 ELNLSHPLLGTALANGTGELSEHQQYVIGLFLSCLYTIFLFPIGFVGNILILVVNISFRE
.: ::.. .: .:::::.:.... :. ..
CCDS46 NESGEEVTTFFDYDYGAPCHKFDVKQIGAQLLPPLYSL-VFIFGFVGNMLVVLILINCKK
20 30 40 50 60 70
90 100 110 120 130 140
pF1KB3 KMTIPDLYFINLAVADLILVADSLIEVFNLHERYYDIAVLCTFMSLFLQVNMYSSVFFLT
. :.:..:::..::... . . . ... ..: ... . ........::.
CCDS46 LKCLTDIYLLNLAISDLLFLITLPLWAHSAANEWVFGNAMCKLFTGLYHIGYFGGIFFII
80 90 100 110 120 130
150 160 170 180 190 200
pF1KB3 WMSFDRYIALARAMRCSLFRTKHHARLSCGLIWMASVSATLVPFTAVHLQHTDEACFCFA
...:::.:...:. :: . .. . :...: :.. . .. :. : . : .
CCDS46 LLTIDRYLAIVHAVFALKARTVTFGVVTSVITWLVAVFASVPGIIFTKCQKEDSVYVC-G
140 150 160 170 180 190
210 220 230 240 250 260
pF1KB3 DVREVQW------LEVTLGFIVPFAIIGLCYSLIVRVLVRAHRHRGLRPRRQKALRMILA
: .. ::...:. :. .::: :...:.: . .. .:..:.:.:..
CCDS46 PYFPRGWNNFHTIMRNILGLVLPLLIMVICYSGILKTLLRCRNEK----KRHRAVRVIFT
200 210 220 230 240
270 280 290 300 310 320
pF1KB3 VVLVFFVCWLPENVFISVHLLQRTQPGAAPCKQSFRHAHPLTGHIVNLAAFSNSCLNPLI
...:.:. : : :. : .. .:. : . :... . . . .... .... :.::.:
CCDS46 IMIVYFLFWTPYNIVILLNTFQEFF-GLSNCESTSQLDQ--ATQVTETLGMTHCCINPII
250 260 270 280 290 300
330 340 350 360 370
pF1KB3 YSFLGETFRDKLRLYIEQKTNLPALNRFCHAALKAVIPDSTEQSDVRFSSAV
:.:.:: :: : ...... . .:::
CCDS46 YAFVGEKFRRYLSVFFRKHIT----KRFCKQCPVFYRETVDGVTSTNTPSTGEQEVSAGL
310 320 330 340 350 360
>>CCDS2737.1 CCR1 gene_id:1230|Hs108|chr3 (355 aa)
initn: 283 init1: 122 opt: 423 Z-score: 382.3 bits: 79.3 E(32554): 5.7e-15
Smith-Waterman score: 475; 28.5% identity (67.5% similar) in 295 aa overlap (60-342:36-319)
30 40 50 60 70 80
pF1KB3 ELNLSHPLLGTALANGTGELSEHQQYVIGLFLSCLYTIFLFPIGFVGNILILVVNISFRE
.: ::.. .: ::.:::::...: .....
CCDS27 TTEDYDTTTEFDYGDATPCQKVNERAFGAQLLPPLYSL-VFVIGLVGNILVVLVLVQYKR
10 20 30 40 50 60
90 100 110 120 130 140
pF1KB3 KMTIPDLYFINLAVADLILVADSLIEV-FNLHERYYDIAVLCTFMSLFLQVNMYSSVFFL
.. ..:..:::..::... . . ..:.. . ..: ..: : ...:: .::.
CCDS27 LKNMTSIYLLNLAISDLLFLFTLPFWIDYKLKDDWVFGDAMCKILSGFYYTGLYSEIFFI
70 80 90 100 110 120
150 160 170 180 190 200
pF1KB3 TWMSFDRYIALARAMRCSLFRTKHHARLSCGLIWMASVSATL--VPFTAVHLQHTDEAC-
...:::.:...:. :: . .. .:: .. :.. . :. .. . : ..:
CCDS27 ILLTIDRYLAIVHAVFALRARTVTFGVITSIIIWALAILASMPGLYFSKTQWEFTHHTCS
130 140 150 160 170 180
210 220 230 240 250
pF1KB3 --FCFADVRE---VQWLEVTL-GFIVPFAIIGLCYSLIVRVLVRAHRHRGLRP--RRQKA
: ..:: : :...: :...:. .. .::. :...:.: :: ...::
CCDS27 LHFPHESLREWKLFQALKLNLFGLVLPLLVMIICYTGIIKILLR-------RPNEKKSKA
190 200 210 220 230
260 270 280 290 300 310
pF1KB3 LRMILAVVLVFFVCWLPENVFISVHLLQRTQPGAAPCKQSFRHAHPLTGHIVNLAAFSNS
.:.:......::. : : :. : . ..: . :.:: :: :. ..... :...
CCDS27 VRLIFVIMIIFFLFWTPYNLTILISVFQDFLF-THECEQS-RHLD-LAVQVTEVIAYTHC
240 250 260 270 280 290
320 330 340 350 360 370
pF1KB3 CLNPLIYSFLGETFRDKLRLYIEQKTNLPALNRFCHAALKAVIPDSTEQSDVRFSSAV
:.::.::.:.:: :: :: ....
CCDS27 CVNPVIYAFVGERFRKYLRQLFHRRVAVHLVKWLPFLSVDRLERVSSTSPSTGEHELSAG
300 310 320 330 340 350
375 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 21:08:54 2016 done: Thu Nov 3 21:08:55 2016
Total Scan time: 2.780 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]