Result of FASTA (ccds) for
pF1KB3718
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3718, 165 aa
1>>>pF1KB3718 165 - 165 aa - 165 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2628+/-0.000755; mu= 12.0320+/- 0.045
mean_var=56.4370+/-11.097, 0's: 0 Z-trim(107.1): 27 B-trim: 0 in 0/47
Lambda= 0.170723
statistics sampled from 9335 (9353) to 9335 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.69), E-opt: 0.2 (0.287), width: 16
Scan time: 1.600
The best scores are: opt bits E(32554)
CCDS13127.1 DSTN gene_id:11034|Hs108|chr20 ( 165) 1109 280.9 2.4e-76
CCDS46580.1 DSTN gene_id:11034|Hs108|chr20 ( 148) 994 252.6 7.3e-68
CCDS8114.1 CFL1 gene_id:1072|Hs108|chr11 ( 166) 780 199.9 6e-52
CCDS9650.1 CFL2 gene_id:1073|Hs108|chr14 ( 166) 755 193.7 4.2e-50
CCDS9649.1 CFL2 gene_id:1073|Hs108|chr14 ( 166) 755 193.7 4.2e-50
CCDS58311.1 CFL2 gene_id:1073|Hs108|chr14 ( 149) 684 176.2 7.1e-45
>>CCDS13127.1 DSTN gene_id:11034|Hs108|chr20 (165 aa)
initn: 1109 init1: 1109 opt: 1109 Z-score: 1484.2 bits: 280.9 E(32554): 2.4e-76
Smith-Waterman score: 1109; 100.0% identity (100.0% similar) in 165 aa overlap (1-165:1-165)
10 20 30 40 50 60
pF1KB3 MASGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MASGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 GVTITDPFKHFVGMLPEKDCRYALYDASFETKESRKEELMFFLWAPELAPLKSKMIYASS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 GVTITDPFKHFVGMLPEKDCRYALYDASFETKESRKEELMFFLWAPELAPLKSKMIYASS
70 80 90 100 110 120
130 140 150 160
pF1KB3 KDAIKKKFQGIKHECQANGPEDLNRACIAEKLGGSLIVAFEGCPV
:::::::::::::::::::::::::::::::::::::::::::::
CCDS13 KDAIKKKFQGIKHECQANGPEDLNRACIAEKLGGSLIVAFEGCPV
130 140 150 160
>>CCDS46580.1 DSTN gene_id:11034|Hs108|chr20 (148 aa)
initn: 994 init1: 994 opt: 994 Z-score: 1331.8 bits: 252.6 E(32554): 7.3e-68
Smith-Waterman score: 994; 100.0% identity (100.0% similar) in 148 aa overlap (18-165:1-148)
10 20 30 40 50 60
pF1KB3 MASGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDV
:::::::::::::::::::::::::::::::::::::::::::
CCDS46 MKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDV
10 20 30 40
70 80 90 100 110 120
pF1KB3 GVTITDPFKHFVGMLPEKDCRYALYDASFETKESRKEELMFFLWAPELAPLKSKMIYASS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 GVTITDPFKHFVGMLPEKDCRYALYDASFETKESRKEELMFFLWAPELAPLKSKMIYASS
50 60 70 80 90 100
130 140 150 160
pF1KB3 KDAIKKKFQGIKHECQANGPEDLNRACIAEKLGGSLIVAFEGCPV
:::::::::::::::::::::::::::::::::::::::::::::
CCDS46 KDAIKKKFQGIKHECQANGPEDLNRACIAEKLGGSLIVAFEGCPV
110 120 130 140
>>CCDS8114.1 CFL1 gene_id:1072|Hs108|chr11 (166 aa)
initn: 773 init1: 705 opt: 780 Z-score: 1046.2 bits: 199.9 E(32554): 6e-52
Smith-Waterman score: 780; 71.1% identity (86.7% similar) in 166 aa overlap (1-165:1-166)
10 20 30 40 50 60
pF1KB3 MASGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDV
::::: :.: : ..: :::::: :::::.:::::::.:::: ::: ::.:::::::::::
CCDS81 MASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 GVTITDPFKHFVGMLPEKDCRYALYDASFETKESRKEELMFFLWAPELAPLKSKMIYASS
: :. ::. :: :::.::::::::::..:::::.::.:.:..:::: ::::::::::::
CCDS81 GQTVDDPYATFVKMLPDKDCRYALYDATYETKESKKEDLVFIFWAPESAPLKSKMIYASS
70 80 90 100 110 120
130 140 150 160
pF1KB3 KDAIKKKFQGIKHECQANGPEDLNRAC-IAEKLGGSLIVAFEGCPV
:::::::. ::::: ::: :... : .::::::: ....:: :.
CCDS81 KDAIKKKLTGIKHELQANCYEEVKDRCTLAEKLGGSAVISLEGKPL
130 140 150 160
>>CCDS9650.1 CFL2 gene_id:1073|Hs108|chr14 (166 aa)
initn: 753 init1: 688 opt: 755 Z-score: 1012.9 bits: 193.7 E(32554): 4.2e-50
Smith-Waterman score: 755; 68.7% identity (87.3% similar) in 166 aa overlap (1-165:1-166)
10 20 30 40 50 60
pF1KB3 MASGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDV
::::: : ::: ..: :::::: :: ::::::::::.:::: ::. :::::.:.:::::.
CCDS96 MASGVTVNDEVIKVFNDMKVRKSSTQEEIKKRKKAVLFCLSDDKRQIIVEEAKQILVGDI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 GVTITDPFKHFVGMLPEKDCRYALYDASFETKESRKEELMFFLWAPELAPLKSKMIYASS
: :. ::. :: .:: .:::::::::..:::::.::.:.:..:::: ::::::::::::
CCDS96 GDTVEDPYTSFVKLLPLNDCRYALYDATYETKESKKEDLVFIFWAPESAPLKSKMIYASS
70 80 90 100 110 120
130 140 150 160
pF1KB3 KDAIKKKFQGIKHECQANGPEDL-NRACIAEKLGGSLIVAFEGCPV
:::::::: ::::: :.:: .:. .:. ..:::::...:..:: :.
CCDS96 KDAIKKKFTGIKHEWQVNGLDDIKDRSTLGEKLGGNVVVSLEGKPL
130 140 150 160
>>CCDS9649.1 CFL2 gene_id:1073|Hs108|chr14 (166 aa)
initn: 753 init1: 688 opt: 755 Z-score: 1012.9 bits: 193.7 E(32554): 4.2e-50
Smith-Waterman score: 755; 68.7% identity (87.3% similar) in 166 aa overlap (1-165:1-166)
10 20 30 40 50 60
pF1KB3 MASGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDV
::::: : ::: ..: :::::: :: ::::::::::.:::: ::. :::::.:.:::::.
CCDS96 MASGVTVNDEVIKVFNDMKVRKSSTQEEIKKRKKAVLFCLSDDKRQIIVEEAKQILVGDI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 GVTITDPFKHFVGMLPEKDCRYALYDASFETKESRKEELMFFLWAPELAPLKSKMIYASS
: :. ::. :: .:: .:::::::::..:::::.::.:.:..:::: ::::::::::::
CCDS96 GDTVEDPYTSFVKLLPLNDCRYALYDATYETKESKKEDLVFIFWAPESAPLKSKMIYASS
70 80 90 100 110 120
130 140 150 160
pF1KB3 KDAIKKKFQGIKHECQANGPEDL-NRACIAEKLGGSLIVAFEGCPV
:::::::: ::::: :.:: .:. .:. ..:::::...:..:: :.
CCDS96 KDAIKKKFTGIKHEWQVNGLDDIKDRSTLGEKLGGNVVVSLEGKPL
130 140 150 160
>>CCDS58311.1 CFL2 gene_id:1073|Hs108|chr14 (149 aa)
initn: 682 init1: 617 opt: 684 Z-score: 919.1 bits: 176.2 E(32554): 7.1e-45
Smith-Waterman score: 684; 69.1% identity (88.6% similar) in 149 aa overlap (18-165:1-149)
10 20 30 40 50 60
pF1KB3 MASGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDV
::::: :: ::::::::::.:::: ::. :::::.:.:::::.
CCDS58 MKVRKSSTQEEIKKRKKAVLFCLSDDKRQIIVEEAKQILVGDI
10 20 30 40
70 80 90 100 110 120
pF1KB3 GVTITDPFKHFVGMLPEKDCRYALYDASFETKESRKEELMFFLWAPELAPLKSKMIYASS
: :. ::. :: .:: .:::::::::..:::::.::.:.:..:::: ::::::::::::
CCDS58 GDTVEDPYTSFVKLLPLNDCRYALYDATYETKESKKEDLVFIFWAPESAPLKSKMIYASS
50 60 70 80 90 100
130 140 150 160
pF1KB3 KDAIKKKFQGIKHECQANGPEDL-NRACIAEKLGGSLIVAFEGCPV
:::::::: ::::: :.:: .:. .:. ..:::::...:..:: :.
CCDS58 KDAIKKKFTGIKHEWQVNGLDDIKDRSTLGEKLGGNVVVSLEGKPL
110 120 130 140
165 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 05:20:06 2016 done: Sat Nov 5 05:20:06 2016
Total Scan time: 1.600 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]