Result of FASTA (omim) for
pF1KB3720
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3720, 324 aa
1>>>pF1KB3720 324 - 324 aa - 324 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9095+/-0.000307; mu= 18.4053+/- 0.019
mean_var=65.7818+/-13.713, 0's: 0 Z-trim(116.1): 20 B-trim: 2466 in 2/54
Lambda= 0.158133
statistics sampled from 26934 (26954) to 26934 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.699), E-opt: 0.2 (0.316), width: 16
Scan time: 7.460
The best scores are: opt bits E(85289)
NP_058212 (OMIM: 144700,601982) N-glycosylase/DNA ( 324) 2263 524.8 9.5e-149
XP_011532062 (OMIM: 144700,601982) PREDICTED: N-gl ( 335) 2206 511.8 8e-145
XP_016861985 (OMIM: 144700,601982) PREDICTED: N-gl ( 335) 2206 511.8 8e-145
NP_058213 (OMIM: 144700,601982) N-glycosylase/DNA ( 410) 2206 511.8 9.4e-145
NP_002533 (OMIM: 144700,601982) N-glycosylase/DNA ( 345) 2203 511.1 1.3e-144
NP_058437 (OMIM: 144700,601982) N-glycosylase/DNA ( 356) 2199 510.2 2.5e-144
NP_058438 (OMIM: 144700,601982) N-glycosylase/DNA ( 322) 2198 509.9 2.8e-144
NP_058214 (OMIM: 144700,601982) N-glycosylase/DNA ( 424) 2198 510.0 3.4e-144
XP_016861988 (OMIM: 144700,601982) PREDICTED: N-gl ( 287) 1700 396.3 4e-110
XP_016861987 (OMIM: 144700,601982) PREDICTED: N-gl ( 290) 1700 396.3 4e-110
XP_016861986 (OMIM: 144700,601982) PREDICTED: N-gl ( 322) 1700 396.3 4.4e-110
XP_016861984 (OMIM: 144700,601982) PREDICTED: N-gl ( 336) 1700 396.3 4.5e-110
XP_016861983 (OMIM: 144700,601982) PREDICTED: N-gl ( 339) 1700 396.3 4.6e-110
XP_016861982 (OMIM: 144700,601982) PREDICTED: N-gl ( 354) 1700 396.4 4.7e-110
NP_058434 (OMIM: 144700,601982) N-glycosylase/DNA ( 357) 1700 396.4 4.7e-110
NP_058436 (OMIM: 144700,601982) N-glycosylase/DNA ( 195) 1319 309.2 4.3e-84
>>NP_058212 (OMIM: 144700,601982) N-glycosylase/DNA lyas (324 aa)
initn: 2263 init1: 2263 opt: 2263 Z-score: 2791.5 bits: 524.8 E(85289): 9.5e-149
Smith-Waterman score: 2263; 100.0% identity (100.0% similar) in 324 aa overlap (1-324:1-324)
10 20 30 40 50 60
pF1KB3 MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELG
250 260 270 280 290 300
310 320
pF1KB3 NFFRSLWGPYAGWAQAVSVPRCPP
::::::::::::::::::::::::
NP_058 NFFRSLWGPYAGWAQAVSVPRCPP
310 320
>>XP_011532062 (OMIM: 144700,601982) PREDICTED: N-glycos (335 aa)
initn: 2203 init1: 2203 opt: 2206 Z-score: 2721.0 bits: 511.8 E(85289): 8e-145
Smith-Waterman score: 2206; 99.1% identity (99.1% similar) in 322 aa overlap (1-322:1-320)
10 20 30 40 50 60
pF1KB3 MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELG
250 260 270 280 290 300
310 320
pF1KB3 NFFRSLWGPYAGWAQAVSVPRCPP
::::::::::::::::: ::
XP_011 NFFRSLWGPYAGWAQAVF--RCQQKACLRRHLHSRAP
310 320 330
>>XP_016861985 (OMIM: 144700,601982) PREDICTED: N-glycos (335 aa)
initn: 2203 init1: 2203 opt: 2206 Z-score: 2721.0 bits: 511.8 E(85289): 8e-145
Smith-Waterman score: 2206; 99.1% identity (99.1% similar) in 322 aa overlap (1-322:1-320)
10 20 30 40 50 60
pF1KB3 MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELG
250 260 270 280 290 300
310 320
pF1KB3 NFFRSLWGPYAGWAQAVSVPRCPP
::::::::::::::::: ::
XP_016 NFFRSLWGPYAGWAQAVF--RCQQKACLRRHLHSRAP
310 320 330
>>NP_058213 (OMIM: 144700,601982) N-glycosylase/DNA lyas (410 aa)
initn: 2198 init1: 2198 opt: 2206 Z-score: 2719.8 bits: 511.8 E(85289): 9.4e-145
Smith-Waterman score: 2206; 97.3% identity (97.6% similar) in 329 aa overlap (1-322:1-329)
10 20 30 40 50 60
pF1KB3 MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELG
250 260 270 280 290 300
310 320
pF1KB3 NFFRSLWGPYAGWAQAV-------SVPRCPP
::::::::::::::::. ::: :
NP_058 NFFRSLWGPYAGWAQATPPSYRCCSVPTCANPAMLRSHQQSAERVPKGRKARWGTLDKEI
310 320 330 340 350 360
>>NP_002533 (OMIM: 144700,601982) N-glycosylase/DNA lyas (345 aa)
initn: 2203 init1: 2203 opt: 2203 Z-score: 2717.1 bits: 511.1 E(85289): 1.3e-144
Smith-Waterman score: 2203; 100.0% identity (100.0% similar) in 317 aa overlap (1-317:1-317)
10 20 30 40 50 60
pF1KB3 MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELG
250 260 270 280 290 300
310 320
pF1KB3 NFFRSLWGPYAGWAQAVSVPRCPP
:::::::::::::::::
NP_002 NFFRSLWGPYAGWAQAVLFSADLRQSRHAQEPPAKRRKGSKGPEG
310 320 330 340
>>NP_058437 (OMIM: 144700,601982) N-glycosylase/DNA lyas (356 aa)
initn: 2199 init1: 2199 opt: 2199 Z-score: 2712.0 bits: 510.2 E(85289): 2.5e-144
Smith-Waterman score: 2199; 99.7% identity (100.0% similar) in 317 aa overlap (1-317:1-317)
10 20 30 40 50 60
pF1KB3 MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELG
250 260 270 280 290 300
310 320
pF1KB3 NFFRSLWGPYAGWAQAVSVPRCPP
::::::::::::::::.
NP_058 NFFRSLWGPYAGWAQALCQVITTFMTFLGPHRLDQMPPEELQTSSSRLGGPPWQCI
310 320 330 340 350
>>NP_058438 (OMIM: 144700,601982) N-glycosylase/DNA lyas (322 aa)
initn: 2198 init1: 2198 opt: 2198 Z-score: 2711.4 bits: 509.9 E(85289): 2.8e-144
Smith-Waterman score: 2198; 100.0% identity (100.0% similar) in 316 aa overlap (1-316:1-316)
10 20 30 40 50 60
pF1KB3 MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELG
250 260 270 280 290 300
310 320
pF1KB3 NFFRSLWGPYAGWAQAVSVPRCPP
::::::::::::::::
NP_058 NFFRSLWGPYAGWAQAAGSDAS
310 320
>>NP_058214 (OMIM: 144700,601982) N-glycosylase/DNA lyas (424 aa)
initn: 2198 init1: 2198 opt: 2198 Z-score: 2709.7 bits: 510.0 E(85289): 3.4e-144
Smith-Waterman score: 2198; 100.0% identity (100.0% similar) in 316 aa overlap (1-316:1-316)
10 20 30 40 50 60
pF1KB3 MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELG
250 260 270 280 290 300
310 320
pF1KB3 NFFRSLWGPYAGWAQAVSVPRCPP
::::::::::::::::
NP_058 NFFRSLWGPYAGWAQAGLLGNAFDGHQLLRPLIFCQDHLREGPPIGRGDSQGEELEPQLP
310 320 330 340 350 360
>>XP_016861988 (OMIM: 144700,601982) PREDICTED: N-glycos (287 aa)
initn: 1700 init1: 1700 opt: 1700 Z-score: 2098.1 bits: 396.3 E(85289): 4e-110
Smith-Waterman score: 1700; 100.0% identity (100.0% similar) in 249 aa overlap (1-249:1-249)
10 20 30 40 50 60
pF1KB3 MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELG
:::::::::
XP_016 CILPGVGTKETFSGACGDLMLAGPKRCSGASRRPAYVGICIPEPPKV
250 260 270 280
>>XP_016861987 (OMIM: 144700,601982) PREDICTED: N-glycos (290 aa)
initn: 1700 init1: 1700 opt: 1700 Z-score: 2098.0 bits: 396.3 E(85289): 4e-110
Smith-Waterman score: 1700; 100.0% identity (100.0% similar) in 249 aa overlap (1-249:1-249)
10 20 30 40 50 60
pF1KB3 MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELG
:::::::::
XP_016 CILPGVGTKETFSGACGDLMLAGPKRLDQMPPEELQTSSSRLGGPPWQCI
250 260 270 280 290
324 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 13:48:37 2016 done: Thu Nov 3 13:48:38 2016
Total Scan time: 7.460 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]