Result of FASTA (omim) for
pF1KB3810
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3810, 500 aa
1>>>pF1KB3810 500 - 500 aa - 500 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.1266+/-0.0005; mu= 6.6643+/- 0.031
mean_var=402.8092+/-91.095, 0's: 0 Z-trim(118.0): 1475 B-trim: 106 in 1/55
Lambda= 0.063903
statistics sampled from 28545 (30481) to 28545 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.713), E-opt: 0.2 (0.357), width: 16
Scan time: 8.500
The best scores are: opt bits E(85289)
NP_002646 (OMIM: 181030,603026) zinc finger protei ( 500) 3399 328.3 3.1e-89
NP_001108106 (OMIM: 181030,603026) zinc finger pro ( 500) 3399 328.3 3.1e-89
XP_016869065 (OMIM: 181030,603026) PREDICTED: zinc ( 500) 3399 328.3 3.1e-89
XP_016869066 (OMIM: 181030,603026) PREDICTED: zinc ( 418) 2831 275.9 1.6e-73
XP_011515846 (OMIM: 181030,603026) PREDICTED: zinc ( 418) 2831 275.9 1.6e-73
NP_001108107 (OMIM: 181030,603026) zinc finger pro ( 418) 2831 275.9 1.6e-73
XP_011527166 (OMIM: 604866) PREDICTED: zinc finger ( 496) 1458 149.4 2.3e-35
XP_005260493 (OMIM: 604866) PREDICTED: zinc finger ( 496) 1458 149.4 2.3e-35
NP_002648 (OMIM: 604866) zinc finger protein PLAGL ( 496) 1458 149.4 2.3e-35
XP_011527165 (OMIM: 604866) PREDICTED: zinc finger ( 496) 1458 149.4 2.3e-35
NP_001304088 (OMIM: 601410,603044) zinc finger pro ( 463) 1293 134.1 8.3e-31
NP_001275975 (OMIM: 601410,603044) zinc finger pro ( 463) 1293 134.1 8.3e-31
NP_001275977 (OMIM: 601410,603044) zinc finger pro ( 463) 1293 134.1 8.3e-31
NP_001304085 (OMIM: 601410,603044) zinc finger pro ( 463) 1293 134.1 8.3e-31
NP_001074422 (OMIM: 601410,603044) zinc finger pro ( 463) 1293 134.1 8.3e-31
NP_001304091 (OMIM: 601410,603044) zinc finger pro ( 463) 1293 134.1 8.3e-31
NP_001275974 (OMIM: 601410,603044) zinc finger pro ( 463) 1293 134.1 8.3e-31
NP_001275978 (OMIM: 601410,603044) zinc finger pro ( 463) 1293 134.1 8.3e-31
NP_001074420 (OMIM: 601410,603044) zinc finger pro ( 463) 1293 134.1 8.3e-31
NP_001304086 (OMIM: 601410,603044) zinc finger pro ( 463) 1293 134.1 8.3e-31
NP_006709 (OMIM: 601410,603044) zinc finger protei ( 463) 1293 134.1 8.3e-31
NP_001074423 (OMIM: 601410,603044) zinc finger pro ( 463) 1293 134.1 8.3e-31
NP_001275972 (OMIM: 601410,603044) zinc finger pro ( 463) 1293 134.1 8.3e-31
NP_001074421 (OMIM: 601410,603044) zinc finger pro ( 463) 1293 134.1 8.3e-31
NP_001304090 (OMIM: 601410,603044) zinc finger pro ( 463) 1293 134.1 8.3e-31
NP_001275971 (OMIM: 601410,603044) zinc finger pro ( 463) 1293 134.1 8.3e-31
NP_001275976 (OMIM: 601410,603044) zinc finger pro ( 463) 1293 134.1 8.3e-31
NP_001275973 (OMIM: 601410,603044) zinc finger pro ( 463) 1293 134.1 8.3e-31
NP_001275970 (OMIM: 601410,603044) zinc finger pro ( 411) 1029 109.7 1.7e-23
NP_001275969 (OMIM: 601410,603044) zinc finger pro ( 411) 1029 109.7 1.7e-23
NP_001074425 (OMIM: 601410,603044) zinc finger pro ( 411) 1029 109.7 1.7e-23
NP_001275966 (OMIM: 601410,603044) zinc finger pro ( 411) 1029 109.7 1.7e-23
NP_001304089 (OMIM: 601410,603044) zinc finger pro ( 411) 1029 109.7 1.7e-23
NP_001074424 (OMIM: 601410,603044) zinc finger pro ( 411) 1029 109.7 1.7e-23
NP_001275967 (OMIM: 601410,603044) zinc finger pro ( 411) 1029 109.7 1.7e-23
NP_001275968 (OMIM: 601410,603044) zinc finger pro ( 411) 1029 109.7 1.7e-23
NP_001304087 (OMIM: 601410,603044) zinc finger pro ( 411) 1029 109.7 1.7e-23
NP_001255984 (OMIM: 607022) transcriptional repres ( 299) 497 60.4 8.1e-09
NP_001255983 (OMIM: 607022) transcriptional repres ( 403) 497 60.6 9.5e-09
NP_001255979 (OMIM: 607022) transcriptional repres ( 422) 497 60.7 9.7e-09
NP_001255978 (OMIM: 607022) transcriptional repres ( 460) 497 60.7 1e-08
NP_001255976 (OMIM: 607022) transcriptional repres ( 573) 497 60.9 1.1e-08
NP_001255974 (OMIM: 607022) transcriptional repres ( 627) 497 61.0 1.2e-08
NP_001255971 (OMIM: 607022) transcriptional repres ( 662) 497 61.0 1.2e-08
NP_001255970 (OMIM: 607022) transcriptional repres ( 663) 497 61.0 1.2e-08
NP_001255969 (OMIM: 607022) transcriptional repres ( 663) 497 61.0 1.2e-08
NP_542185 (OMIM: 607022) transcriptional repressor ( 663) 497 61.0 1.2e-08
NP_001255973 (OMIM: 607022) transcriptional repres ( 665) 497 61.0 1.2e-08
NP_001255972 (OMIM: 607022) transcriptional repres ( 700) 497 61.0 1.3e-08
NP_001265576 (OMIM: 165270) zinc finger and BTB do ( 688) 483 59.7 3.1e-08
>>NP_002646 (OMIM: 181030,603026) zinc finger protein PL (500 aa)
initn: 3399 init1: 3399 opt: 3399 Z-score: 1723.1 bits: 328.3 E(85289): 3.1e-89
Smith-Waterman score: 3399; 99.8% identity (100.0% similar) in 500 aa overlap (1-500:1-500)
10 20 30 40 50 60
pF1KB3 MATVIPGDLSEVRDTQKVPSGKRKRGETKPRKNFPCQLCDKAFNSVEKLKVHSYSHTGER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MATVIPGDLSEVRDTQKVPSGKRKRGETKPRKNFPCQLCDKAFNSVEKLKVHSYSHTGER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 PYKCIQQDCTKAFVSKYKLQRHMATHSPEKTHKCNYCEKMFHRKDHLKNHLHTHDPNKET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 PYKCIQQDCTKAFVSKYKLQRHMATHSPEKTHKCNYCEKMFHRKDHLKNHLHTHDPNKET
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 FKCEECGKNYNTKLGFKRHLALHAATSGDLTCKVCLQTFESTGVLLEHLKSHAGKSSGGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 FKCEECGKNYNTKLGFKRHLALHAATSGDLTCKVCLQTFESTGVLLEHLKSHAGKSSGGV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 KEKKHQCEHCDRRFYTRKDVRRHMVVHTGRKDFLCQYCAQRFGRKDHLTRHMKKSHNQEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 KEKKHQCEHCDRRFYTRKDVRRHMVVHTGRKDFLCQYCAQRFGRKDHLTRHMKKSHNQEL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 LKVKTEPVDFLDPFTCNVSVPIKDELLPVMSLPSSDLLSKPFTNTLQLNLYNTPFQSMQS
:::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::
NP_002 LKVKTEPVDFLDPFTCNVSVPIKDELLPVMSLPSSELLSKPFTNTLQLNLYNTPFQSMQS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 SGSAHQMITTLPLGMTCPIDMDTVHPSHHLSFKYPFSSTSYAISIPEKEQPLKGEIESYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 SGSAHQMITTLPLGMTCPIDMDTVHPSHHLSFKYPFSSTSYAISIPEKEQPLKGEIESYL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 MELQGGVPSSSQDSQASSSSKLGLDPQIGSLDDGAGDLSLSKSSISISDPLNTPALDFSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MELQGGVPSSSQDSQASSSSKLGLDPQIGSLDDGAGDLSLSKSSISISDPLNTPALDFSQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB3 LFNFIPLNGPPYNPLSVGSLGMSYSQEEAHSSVSQLPPQTQDLQDPANTIGLGSLHSLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 LFNFIPLNGPPYNPLSVGSLGMSYSQEEAHSSVSQLPPQTQDLQDPANTIGLGSLHSLSA
430 440 450 460 470 480
490 500
pF1KB3 AFTSSLSTSTTLPRFHQAFQ
::::::::::::::::::::
NP_002 AFTSSLSTSTTLPRFHQAFQ
490 500
>>NP_001108106 (OMIM: 181030,603026) zinc finger protein (500 aa)
initn: 3399 init1: 3399 opt: 3399 Z-score: 1723.1 bits: 328.3 E(85289): 3.1e-89
Smith-Waterman score: 3399; 99.8% identity (100.0% similar) in 500 aa overlap (1-500:1-500)
10 20 30 40 50 60
pF1KB3 MATVIPGDLSEVRDTQKVPSGKRKRGETKPRKNFPCQLCDKAFNSVEKLKVHSYSHTGER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATVIPGDLSEVRDTQKVPSGKRKRGETKPRKNFPCQLCDKAFNSVEKLKVHSYSHTGER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 PYKCIQQDCTKAFVSKYKLQRHMATHSPEKTHKCNYCEKMFHRKDHLKNHLHTHDPNKET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PYKCIQQDCTKAFVSKYKLQRHMATHSPEKTHKCNYCEKMFHRKDHLKNHLHTHDPNKET
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 FKCEECGKNYNTKLGFKRHLALHAATSGDLTCKVCLQTFESTGVLLEHLKSHAGKSSGGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FKCEECGKNYNTKLGFKRHLALHAATSGDLTCKVCLQTFESTGVLLEHLKSHAGKSSGGV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 KEKKHQCEHCDRRFYTRKDVRRHMVVHTGRKDFLCQYCAQRFGRKDHLTRHMKKSHNQEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KEKKHQCEHCDRRFYTRKDVRRHMVVHTGRKDFLCQYCAQRFGRKDHLTRHMKKSHNQEL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 LKVKTEPVDFLDPFTCNVSVPIKDELLPVMSLPSSDLLSKPFTNTLQLNLYNTPFQSMQS
:::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::
NP_001 LKVKTEPVDFLDPFTCNVSVPIKDELLPVMSLPSSELLSKPFTNTLQLNLYNTPFQSMQS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 SGSAHQMITTLPLGMTCPIDMDTVHPSHHLSFKYPFSSTSYAISIPEKEQPLKGEIESYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SGSAHQMITTLPLGMTCPIDMDTVHPSHHLSFKYPFSSTSYAISIPEKEQPLKGEIESYL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 MELQGGVPSSSQDSQASSSSKLGLDPQIGSLDDGAGDLSLSKSSISISDPLNTPALDFSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MELQGGVPSSSQDSQASSSSKLGLDPQIGSLDDGAGDLSLSKSSISISDPLNTPALDFSQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB3 LFNFIPLNGPPYNPLSVGSLGMSYSQEEAHSSVSQLPPQTQDLQDPANTIGLGSLHSLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFNFIPLNGPPYNPLSVGSLGMSYSQEEAHSSVSQLPPQTQDLQDPANTIGLGSLHSLSA
430 440 450 460 470 480
490 500
pF1KB3 AFTSSLSTSTTLPRFHQAFQ
::::::::::::::::::::
NP_001 AFTSSLSTSTTLPRFHQAFQ
490 500
>>XP_016869065 (OMIM: 181030,603026) PREDICTED: zinc fin (500 aa)
initn: 3399 init1: 3399 opt: 3399 Z-score: 1723.1 bits: 328.3 E(85289): 3.1e-89
Smith-Waterman score: 3399; 99.8% identity (100.0% similar) in 500 aa overlap (1-500:1-500)
10 20 30 40 50 60
pF1KB3 MATVIPGDLSEVRDTQKVPSGKRKRGETKPRKNFPCQLCDKAFNSVEKLKVHSYSHTGER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MATVIPGDLSEVRDTQKVPSGKRKRGETKPRKNFPCQLCDKAFNSVEKLKVHSYSHTGER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 PYKCIQQDCTKAFVSKYKLQRHMATHSPEKTHKCNYCEKMFHRKDHLKNHLHTHDPNKET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PYKCIQQDCTKAFVSKYKLQRHMATHSPEKTHKCNYCEKMFHRKDHLKNHLHTHDPNKET
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 FKCEECGKNYNTKLGFKRHLALHAATSGDLTCKVCLQTFESTGVLLEHLKSHAGKSSGGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FKCEECGKNYNTKLGFKRHLALHAATSGDLTCKVCLQTFESTGVLLEHLKSHAGKSSGGV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 KEKKHQCEHCDRRFYTRKDVRRHMVVHTGRKDFLCQYCAQRFGRKDHLTRHMKKSHNQEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KEKKHQCEHCDRRFYTRKDVRRHMVVHTGRKDFLCQYCAQRFGRKDHLTRHMKKSHNQEL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 LKVKTEPVDFLDPFTCNVSVPIKDELLPVMSLPSSDLLSKPFTNTLQLNLYNTPFQSMQS
:::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::
XP_016 LKVKTEPVDFLDPFTCNVSVPIKDELLPVMSLPSSELLSKPFTNTLQLNLYNTPFQSMQS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 SGSAHQMITTLPLGMTCPIDMDTVHPSHHLSFKYPFSSTSYAISIPEKEQPLKGEIESYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SGSAHQMITTLPLGMTCPIDMDTVHPSHHLSFKYPFSSTSYAISIPEKEQPLKGEIESYL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 MELQGGVPSSSQDSQASSSSKLGLDPQIGSLDDGAGDLSLSKSSISISDPLNTPALDFSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MELQGGVPSSSQDSQASSSSKLGLDPQIGSLDDGAGDLSLSKSSISISDPLNTPALDFSQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB3 LFNFIPLNGPPYNPLSVGSLGMSYSQEEAHSSVSQLPPQTQDLQDPANTIGLGSLHSLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LFNFIPLNGPPYNPLSVGSLGMSYSQEEAHSSVSQLPPQTQDLQDPANTIGLGSLHSLSA
430 440 450 460 470 480
490 500
pF1KB3 AFTSSLSTSTTLPRFHQAFQ
::::::::::::::::::::
XP_016 AFTSSLSTSTTLPRFHQAFQ
490 500
>>XP_016869066 (OMIM: 181030,603026) PREDICTED: zinc fin (418 aa)
initn: 2831 init1: 2831 opt: 2831 Z-score: 1440.8 bits: 275.9 E(85289): 1.6e-73
Smith-Waterman score: 2831; 99.8% identity (100.0% similar) in 418 aa overlap (83-500:1-418)
60 70 80 90 100 110
pF1KB3 SYSHTGERPYKCIQQDCTKAFVSKYKLQRHMATHSPEKTHKCNYCEKMFHRKDHLKNHLH
::::::::::::::::::::::::::::::
XP_016 MATHSPEKTHKCNYCEKMFHRKDHLKNHLH
10 20 30
120 130 140 150 160 170
pF1KB3 THDPNKETFKCEECGKNYNTKLGFKRHLALHAATSGDLTCKVCLQTFESTGVLLEHLKSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 THDPNKETFKCEECGKNYNTKLGFKRHLALHAATSGDLTCKVCLQTFESTGVLLEHLKSH
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB3 AGKSSGGVKEKKHQCEHCDRRFYTRKDVRRHMVVHTGRKDFLCQYCAQRFGRKDHLTRHM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AGKSSGGVKEKKHQCEHCDRRFYTRKDVRRHMVVHTGRKDFLCQYCAQRFGRKDHLTRHM
100 110 120 130 140 150
240 250 260 270 280 290
pF1KB3 KKSHNQELLKVKTEPVDFLDPFTCNVSVPIKDELLPVMSLPSSDLLSKPFTNTLQLNLYN
:::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::
XP_016 KKSHNQELLKVKTEPVDFLDPFTCNVSVPIKDELLPVMSLPSSELLSKPFTNTLQLNLYN
160 170 180 190 200 210
300 310 320 330 340 350
pF1KB3 TPFQSMQSSGSAHQMITTLPLGMTCPIDMDTVHPSHHLSFKYPFSSTSYAISIPEKEQPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TPFQSMQSSGSAHQMITTLPLGMTCPIDMDTVHPSHHLSFKYPFSSTSYAISIPEKEQPL
220 230 240 250 260 270
360 370 380 390 400 410
pF1KB3 KGEIESYLMELQGGVPSSSQDSQASSSSKLGLDPQIGSLDDGAGDLSLSKSSISISDPLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KGEIESYLMELQGGVPSSSQDSQASSSSKLGLDPQIGSLDDGAGDLSLSKSSISISDPLN
280 290 300 310 320 330
420 430 440 450 460 470
pF1KB3 TPALDFSQLFNFIPLNGPPYNPLSVGSLGMSYSQEEAHSSVSQLPPQTQDLQDPANTIGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TPALDFSQLFNFIPLNGPPYNPLSVGSLGMSYSQEEAHSSVSQLPPQTQDLQDPANTIGL
340 350 360 370 380 390
480 490 500
pF1KB3 GSLHSLSAAFTSSLSTSTTLPRFHQAFQ
::::::::::::::::::::::::::::
XP_016 GSLHSLSAAFTSSLSTSTTLPRFHQAFQ
400 410
>>XP_011515846 (OMIM: 181030,603026) PREDICTED: zinc fin (418 aa)
initn: 2831 init1: 2831 opt: 2831 Z-score: 1440.8 bits: 275.9 E(85289): 1.6e-73
Smith-Waterman score: 2831; 99.8% identity (100.0% similar) in 418 aa overlap (83-500:1-418)
60 70 80 90 100 110
pF1KB3 SYSHTGERPYKCIQQDCTKAFVSKYKLQRHMATHSPEKTHKCNYCEKMFHRKDHLKNHLH
::::::::::::::::::::::::::::::
XP_011 MATHSPEKTHKCNYCEKMFHRKDHLKNHLH
10 20 30
120 130 140 150 160 170
pF1KB3 THDPNKETFKCEECGKNYNTKLGFKRHLALHAATSGDLTCKVCLQTFESTGVLLEHLKSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 THDPNKETFKCEECGKNYNTKLGFKRHLALHAATSGDLTCKVCLQTFESTGVLLEHLKSH
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB3 AGKSSGGVKEKKHQCEHCDRRFYTRKDVRRHMVVHTGRKDFLCQYCAQRFGRKDHLTRHM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AGKSSGGVKEKKHQCEHCDRRFYTRKDVRRHMVVHTGRKDFLCQYCAQRFGRKDHLTRHM
100 110 120 130 140 150
240 250 260 270 280 290
pF1KB3 KKSHNQELLKVKTEPVDFLDPFTCNVSVPIKDELLPVMSLPSSDLLSKPFTNTLQLNLYN
:::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::
XP_011 KKSHNQELLKVKTEPVDFLDPFTCNVSVPIKDELLPVMSLPSSELLSKPFTNTLQLNLYN
160 170 180 190 200 210
300 310 320 330 340 350
pF1KB3 TPFQSMQSSGSAHQMITTLPLGMTCPIDMDTVHPSHHLSFKYPFSSTSYAISIPEKEQPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TPFQSMQSSGSAHQMITTLPLGMTCPIDMDTVHPSHHLSFKYPFSSTSYAISIPEKEQPL
220 230 240 250 260 270
360 370 380 390 400 410
pF1KB3 KGEIESYLMELQGGVPSSSQDSQASSSSKLGLDPQIGSLDDGAGDLSLSKSSISISDPLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KGEIESYLMELQGGVPSSSQDSQASSSSKLGLDPQIGSLDDGAGDLSLSKSSISISDPLN
280 290 300 310 320 330
420 430 440 450 460 470
pF1KB3 TPALDFSQLFNFIPLNGPPYNPLSVGSLGMSYSQEEAHSSVSQLPPQTQDLQDPANTIGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TPALDFSQLFNFIPLNGPPYNPLSVGSLGMSYSQEEAHSSVSQLPPQTQDLQDPANTIGL
340 350 360 370 380 390
480 490 500
pF1KB3 GSLHSLSAAFTSSLSTSTTLPRFHQAFQ
::::::::::::::::::::::::::::
XP_011 GSLHSLSAAFTSSLSTSTTLPRFHQAFQ
400 410
>>NP_001108107 (OMIM: 181030,603026) zinc finger protein (418 aa)
initn: 2831 init1: 2831 opt: 2831 Z-score: 1440.8 bits: 275.9 E(85289): 1.6e-73
Smith-Waterman score: 2831; 99.8% identity (100.0% similar) in 418 aa overlap (83-500:1-418)
60 70 80 90 100 110
pF1KB3 SYSHTGERPYKCIQQDCTKAFVSKYKLQRHMATHSPEKTHKCNYCEKMFHRKDHLKNHLH
::::::::::::::::::::::::::::::
NP_001 MATHSPEKTHKCNYCEKMFHRKDHLKNHLH
10 20 30
120 130 140 150 160 170
pF1KB3 THDPNKETFKCEECGKNYNTKLGFKRHLALHAATSGDLTCKVCLQTFESTGVLLEHLKSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 THDPNKETFKCEECGKNYNTKLGFKRHLALHAATSGDLTCKVCLQTFESTGVLLEHLKSH
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB3 AGKSSGGVKEKKHQCEHCDRRFYTRKDVRRHMVVHTGRKDFLCQYCAQRFGRKDHLTRHM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AGKSSGGVKEKKHQCEHCDRRFYTRKDVRRHMVVHTGRKDFLCQYCAQRFGRKDHLTRHM
100 110 120 130 140 150
240 250 260 270 280 290
pF1KB3 KKSHNQELLKVKTEPVDFLDPFTCNVSVPIKDELLPVMSLPSSDLLSKPFTNTLQLNLYN
:::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::
NP_001 KKSHNQELLKVKTEPVDFLDPFTCNVSVPIKDELLPVMSLPSSELLSKPFTNTLQLNLYN
160 170 180 190 200 210
300 310 320 330 340 350
pF1KB3 TPFQSMQSSGSAHQMITTLPLGMTCPIDMDTVHPSHHLSFKYPFSSTSYAISIPEKEQPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TPFQSMQSSGSAHQMITTLPLGMTCPIDMDTVHPSHHLSFKYPFSSTSYAISIPEKEQPL
220 230 240 250 260 270
360 370 380 390 400 410
pF1KB3 KGEIESYLMELQGGVPSSSQDSQASSSSKLGLDPQIGSLDDGAGDLSLSKSSISISDPLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGEIESYLMELQGGVPSSSQDSQASSSSKLGLDPQIGSLDDGAGDLSLSKSSISISDPLN
280 290 300 310 320 330
420 430 440 450 460 470
pF1KB3 TPALDFSQLFNFIPLNGPPYNPLSVGSLGMSYSQEEAHSSVSQLPPQTQDLQDPANTIGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TPALDFSQLFNFIPLNGPPYNPLSVGSLGMSYSQEEAHSSVSQLPPQTQDLQDPANTIGL
340 350 360 370 380 390
480 490 500
pF1KB3 GSLHSLSAAFTSSLSTSTTLPRFHQAFQ
::::::::::::::::::::::::::::
NP_001 GSLHSLSAAFTSSLSTSTTLPRFHQAFQ
400 410
>>XP_011527166 (OMIM: 604866) PREDICTED: zinc finger pro (496 aa)
initn: 1626 init1: 1238 opt: 1458 Z-score: 756.0 bits: 149.4 E(85289): 2.3e-35
Smith-Waterman score: 1715; 52.2% identity (75.2% similar) in 504 aa overlap (3-500:6-496)
10 20 30 40 50
pF1KB3 MATVIPGDLSEVRDTQKVPSG--KRKRG-ETKPRKNFPCQLCDKAFNSVEKLKVHSY
: .: ...... ..: : :: :.. . . :.. :.. :::. ::
XP_011 MTTFFTSVPPWIQDAKQEEEVGWKLVPRPRGREAESQVKCQCEISGTPFSNGEKLRPHSL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB3 SHTGERPYKCIQQDCTKAFVSKYKLQRHMATHSPEKTHKCNYCEKMFHRKDHLKNHLHTH
. .:::.: : : :::.::::: ::::::: .: :.: ::.:::::::::.:::.::
XP_011 PQPEQRPYSCPQLHCGKAFASKYKLYRHMATHSAQKPHQCMYCDKMFHRKDHLRNHLQTH
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB3 DPNKETFKCEECGKNYNTKLGFKRHLALHAATSGDLTCKVCLQTFESTGVLLEHLKSHAG
:::::...: :::::::::::..::::.:::.::::.::::::::::: .::::::.:.
XP_011 DPNKEALHCSECGKNYNTKLGYRRHLAMHAASSGDLSCKVCLQTFESTQALLEHLKAHSR
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB3 KSSGGVKEKKHQCEHCDRRFYTRKDVRRHMVVHTGRKDFLCQYCAQRFGRKDHLTRHMKK
. .::.::::: :.:::::::::::::::.:::::::::::::::::::::::::::.::
XP_011 RVAGGAKEKKHPCDHCDRRFYTRKDVRRHLVVHTGRKDFLCQYCAQRFGRKDHLTRHVKK
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB3 SHNQELLKVKTEPVDFLDPFTCNVSVPIKDELLPVMSLPSSDLL-SKPFTNTLQLNLYNT
::.:::::.::::::.: ..:. .: .:.:: ::. . : :.. .: : . : ...:..
XP_011 SHSQELLKIKTEPVDMLGLLSCSSTVSVKEELSPVLCMASRDVMGTKAFPGMLPMGMYGA
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB3 PFQSMQSSGSAHQMI-TTLPLGMTCPIDMDTVHPSHHLSFKYPFSSTSYAISIPEKEQPL
. .: :.: :... .:::.::. :.. . . .: :: ..:::: .:.: :
XP_011 HIPTMPSTGVPHSLVHNTLPMGMSYPLESSPISSPAQLPPKYQLGSTSY---LPDK-LP-
310 320 330 340 350
360 370 380 390 400 410
pF1KB3 KGEIESYLMELQGGVPSSSQDSQASSSSKLGLDPQIGSLDDGAGDLSLSKSSISISDPLN
: :..:.: :: :.. :: . : .: :: .. . :.:: ..:. :
XP_011 KVEVDSFLAELPGSLSLSSAEPQPAS-------PQPAAAAALLDEALLAKSPANLSEALC
360 370 380 390 400
420 430 440 450 460 470
pF1KB3 TPALDFSQLFNFIPLNGPPYNPL-SVGSLGMSYSQEEAHSSVSQLPPQTQDLQDPANTIG
. .:::.:..:.::: :: :: ..:.: :.::: ::. .. : : :: .. ..
XP_011 AANVDFSHLLGFLPLNLPPCNPPGATGGLVMGYSQAEAQPLLTTLQAQPQDSPGAGGPLN
410 420 430 440 450 460
480 490 500
pF1KB3 LGSLHSLSAAFTSSLSTSTTLPRFHQAFQ
.: :::: .:::.:: ::::::::::::
XP_011 FGPLHSLPPVFTSGLS-STTLPRFHQAFQ
470 480 490
>>XP_005260493 (OMIM: 604866) PREDICTED: zinc finger pro (496 aa)
initn: 1626 init1: 1238 opt: 1458 Z-score: 756.0 bits: 149.4 E(85289): 2.3e-35
Smith-Waterman score: 1715; 52.2% identity (75.2% similar) in 504 aa overlap (3-500:6-496)
10 20 30 40 50
pF1KB3 MATVIPGDLSEVRDTQKVPSG--KRKRG-ETKPRKNFPCQLCDKAFNSVEKLKVHSY
: .: ...... ..: : :: :.. . . :.. :.. :::. ::
XP_005 MTTFFTSVPPWIQDAKQEEEVGWKLVPRPRGREAESQVKCQCEISGTPFSNGEKLRPHSL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB3 SHTGERPYKCIQQDCTKAFVSKYKLQRHMATHSPEKTHKCNYCEKMFHRKDHLKNHLHTH
. .:::.: : : :::.::::: ::::::: .: :.: ::.:::::::::.:::.::
XP_005 PQPEQRPYSCPQLHCGKAFASKYKLYRHMATHSAQKPHQCMYCDKMFHRKDHLRNHLQTH
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB3 DPNKETFKCEECGKNYNTKLGFKRHLALHAATSGDLTCKVCLQTFESTGVLLEHLKSHAG
:::::...: :::::::::::..::::.:::.::::.::::::::::: .::::::.:.
XP_005 DPNKEALHCSECGKNYNTKLGYRRHLAMHAASSGDLSCKVCLQTFESTQALLEHLKAHSR
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB3 KSSGGVKEKKHQCEHCDRRFYTRKDVRRHMVVHTGRKDFLCQYCAQRFGRKDHLTRHMKK
. .::.::::: :.:::::::::::::::.:::::::::::::::::::::::::::.::
XP_005 RVAGGAKEKKHPCDHCDRRFYTRKDVRRHLVVHTGRKDFLCQYCAQRFGRKDHLTRHVKK
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB3 SHNQELLKVKTEPVDFLDPFTCNVSVPIKDELLPVMSLPSSDLL-SKPFTNTLQLNLYNT
::.:::::.::::::.: ..:. .: .:.:: ::. . : :.. .: : . : ...:..
XP_005 SHSQELLKIKTEPVDMLGLLSCSSTVSVKEELSPVLCMASRDVMGTKAFPGMLPMGMYGA
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB3 PFQSMQSSGSAHQMI-TTLPLGMTCPIDMDTVHPSHHLSFKYPFSSTSYAISIPEKEQPL
. .: :.: :... .:::.::. :.. . . .: :: ..:::: .:.: :
XP_005 HIPTMPSTGVPHSLVHNTLPMGMSYPLESSPISSPAQLPPKYQLGSTSY---LPDK-LP-
310 320 330 340 350
360 370 380 390 400 410
pF1KB3 KGEIESYLMELQGGVPSSSQDSQASSSSKLGLDPQIGSLDDGAGDLSLSKSSISISDPLN
: :..:.: :: :.. :: . : .: :: .. . :.:: ..:. :
XP_005 KVEVDSFLAELPGSLSLSSAEPQPAS-------PQPAAAAALLDEALLAKSPANLSEALC
360 370 380 390 400
420 430 440 450 460 470
pF1KB3 TPALDFSQLFNFIPLNGPPYNPL-SVGSLGMSYSQEEAHSSVSQLPPQTQDLQDPANTIG
. .:::.:..:.::: :: :: ..:.: :.::: ::. .. : : :: .. ..
XP_005 AANVDFSHLLGFLPLNLPPCNPPGATGGLVMGYSQAEAQPLLTTLQAQPQDSPGAGGPLN
410 420 430 440 450 460
480 490 500
pF1KB3 LGSLHSLSAAFTSSLSTSTTLPRFHQAFQ
.: :::: .:::.:: ::::::::::::
XP_005 FGPLHSLPPVFTSGLS-STTLPRFHQAFQ
470 480 490
>>NP_002648 (OMIM: 604866) zinc finger protein PLAGL2 [H (496 aa)
initn: 1626 init1: 1238 opt: 1458 Z-score: 756.0 bits: 149.4 E(85289): 2.3e-35
Smith-Waterman score: 1715; 52.2% identity (75.2% similar) in 504 aa overlap (3-500:6-496)
10 20 30 40 50
pF1KB3 MATVIPGDLSEVRDTQKVPSG--KRKRG-ETKPRKNFPCQLCDKAFNSVEKLKVHSY
: .: ...... ..: : :: :.. . . :.. :.. :::. ::
NP_002 MTTFFTSVPPWIQDAKQEEEVGWKLVPRPRGREAESQVKCQCEISGTPFSNGEKLRPHSL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB3 SHTGERPYKCIQQDCTKAFVSKYKLQRHMATHSPEKTHKCNYCEKMFHRKDHLKNHLHTH
. .:::.: : : :::.::::: ::::::: .: :.: ::.:::::::::.:::.::
NP_002 PQPEQRPYSCPQLHCGKAFASKYKLYRHMATHSAQKPHQCMYCDKMFHRKDHLRNHLQTH
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB3 DPNKETFKCEECGKNYNTKLGFKRHLALHAATSGDLTCKVCLQTFESTGVLLEHLKSHAG
:::::...: :::::::::::..::::.:::.::::.::::::::::: .::::::.:.
NP_002 DPNKEALHCSECGKNYNTKLGYRRHLAMHAASSGDLSCKVCLQTFESTQALLEHLKAHSR
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB3 KSSGGVKEKKHQCEHCDRRFYTRKDVRRHMVVHTGRKDFLCQYCAQRFGRKDHLTRHMKK
. .::.::::: :.:::::::::::::::.:::::::::::::::::::::::::::.::
NP_002 RVAGGAKEKKHPCDHCDRRFYTRKDVRRHLVVHTGRKDFLCQYCAQRFGRKDHLTRHVKK
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB3 SHNQELLKVKTEPVDFLDPFTCNVSVPIKDELLPVMSLPSSDLL-SKPFTNTLQLNLYNT
::.:::::.::::::.: ..:. .: .:.:: ::. . : :.. .: : . : ...:..
NP_002 SHSQELLKIKTEPVDMLGLLSCSSTVSVKEELSPVLCMASRDVMGTKAFPGMLPMGMYGA
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB3 PFQSMQSSGSAHQMI-TTLPLGMTCPIDMDTVHPSHHLSFKYPFSSTSYAISIPEKEQPL
. .: :.: :... .:::.::. :.. . . .: :: ..:::: .:.: :
NP_002 HIPTMPSTGVPHSLVHNTLPMGMSYPLESSPISSPAQLPPKYQLGSTSY---LPDK-LP-
310 320 330 340 350
360 370 380 390 400 410
pF1KB3 KGEIESYLMELQGGVPSSSQDSQASSSSKLGLDPQIGSLDDGAGDLSLSKSSISISDPLN
: :..:.: :: :.. :: . : .: :: .. . :.:: ..:. :
NP_002 KVEVDSFLAELPGSLSLSSAEPQPAS-------PQPAAAAALLDEALLAKSPANLSEALC
360 370 380 390 400
420 430 440 450 460 470
pF1KB3 TPALDFSQLFNFIPLNGPPYNPL-SVGSLGMSYSQEEAHSSVSQLPPQTQDLQDPANTIG
. .:::.:..:.::: :: :: ..:.: :.::: ::. .. : : :: .. ..
NP_002 AANVDFSHLLGFLPLNLPPCNPPGATGGLVMGYSQAEAQPLLTTLQAQPQDSPGAGGPLN
410 420 430 440 450 460
480 490 500
pF1KB3 LGSLHSLSAAFTSSLSTSTTLPRFHQAFQ
.: :::: .:::.:: ::::::::::::
NP_002 FGPLHSLPPVFTSGLS-STTLPRFHQAFQ
470 480 490
>>XP_011527165 (OMIM: 604866) PREDICTED: zinc finger pro (496 aa)
initn: 1626 init1: 1238 opt: 1458 Z-score: 756.0 bits: 149.4 E(85289): 2.3e-35
Smith-Waterman score: 1715; 52.2% identity (75.2% similar) in 504 aa overlap (3-500:6-496)
10 20 30 40 50
pF1KB3 MATVIPGDLSEVRDTQKVPSG--KRKRG-ETKPRKNFPCQLCDKAFNSVEKLKVHSY
: .: ...... ..: : :: :.. . . :.. :.. :::. ::
XP_011 MTTFFTSVPPWIQDAKQEEEVGWKLVPRPRGREAESQVKCQCEISGTPFSNGEKLRPHSL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB3 SHTGERPYKCIQQDCTKAFVSKYKLQRHMATHSPEKTHKCNYCEKMFHRKDHLKNHLHTH
. .:::.: : : :::.::::: ::::::: .: :.: ::.:::::::::.:::.::
XP_011 PQPEQRPYSCPQLHCGKAFASKYKLYRHMATHSAQKPHQCMYCDKMFHRKDHLRNHLQTH
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB3 DPNKETFKCEECGKNYNTKLGFKRHLALHAATSGDLTCKVCLQTFESTGVLLEHLKSHAG
:::::...: :::::::::::..::::.:::.::::.::::::::::: .::::::.:.
XP_011 DPNKEALHCSECGKNYNTKLGYRRHLAMHAASSGDLSCKVCLQTFESTQALLEHLKAHSR
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB3 KSSGGVKEKKHQCEHCDRRFYTRKDVRRHMVVHTGRKDFLCQYCAQRFGRKDHLTRHMKK
. .::.::::: :.:::::::::::::::.:::::::::::::::::::::::::::.::
XP_011 RVAGGAKEKKHPCDHCDRRFYTRKDVRRHLVVHTGRKDFLCQYCAQRFGRKDHLTRHVKK
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB3 SHNQELLKVKTEPVDFLDPFTCNVSVPIKDELLPVMSLPSSDLL-SKPFTNTLQLNLYNT
::.:::::.::::::.: ..:. .: .:.:: ::. . : :.. .: : . : ...:..
XP_011 SHSQELLKIKTEPVDMLGLLSCSSTVSVKEELSPVLCMASRDVMGTKAFPGMLPMGMYGA
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB3 PFQSMQSSGSAHQMI-TTLPLGMTCPIDMDTVHPSHHLSFKYPFSSTSYAISIPEKEQPL
. .: :.: :... .:::.::. :.. . . .: :: ..:::: .:.: :
XP_011 HIPTMPSTGVPHSLVHNTLPMGMSYPLESSPISSPAQLPPKYQLGSTSY---LPDK-LP-
310 320 330 340 350
360 370 380 390 400 410
pF1KB3 KGEIESYLMELQGGVPSSSQDSQASSSSKLGLDPQIGSLDDGAGDLSLSKSSISISDPLN
: :..:.: :: :.. :: . : .: :: .. . :.:: ..:. :
XP_011 KVEVDSFLAELPGSLSLSSAEPQPAS-------PQPAAAAALLDEALLAKSPANLSEALC
360 370 380 390 400
420 430 440 450 460 470
pF1KB3 TPALDFSQLFNFIPLNGPPYNPL-SVGSLGMSYSQEEAHSSVSQLPPQTQDLQDPANTIG
. .:::.:..:.::: :: :: ..:.: :.::: ::. .. : : :: .. ..
XP_011 AANVDFSHLLGFLPLNLPPCNPPGATGGLVMGYSQAEAQPLLTTLQAQPQDSPGAGGPLN
410 420 430 440 450 460
480 490 500
pF1KB3 LGSLHSLSAAFTSSLSTSTTLPRFHQAFQ
.: :::: .:::.:: ::::::::::::
XP_011 FGPLHSLPPVFTSGLS-STTLPRFHQAFQ
470 480 490
500 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 13:59:04 2016 done: Thu Nov 3 13:59:05 2016
Total Scan time: 8.500 Total Display time: 0.090
Function used was FASTA [36.3.4 Apr, 2011]