Result of FASTA (omim) for
pF1KB3912
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3912, 153 aa
1>>>pF1KB3912 153 - 153 aa - 153 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.8123+/-0.0003; mu= 14.6133+/- 0.019
mean_var=63.8017+/-12.995, 0's: 0 Z-trim(117.4): 38 B-trim: 0 in 0/53
Lambda= 0.160568
statistics sampled from 29361 (29411) to 29361 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.725), E-opt: 0.2 (0.345), width: 16
Scan time: 5.430
The best scores are: opt bits E(85289)
NP_000609 (OMIM: 147440,608747) insulin-like growt ( 153) 1058 253.0 1.4e-67
NP_001104753 (OMIM: 147440,608747) insulin-like gr ( 158) 934 224.3 6.4e-59
NP_001104755 (OMIM: 147440,608747) insulin-like gr ( 195) 934 224.3 7.5e-59
NP_001104754 (OMIM: 147440,608747) insulin-like gr ( 137) 902 216.8 9.7e-57
XP_016874752 (OMIM: 147440,608747) PREDICTED: insu ( 170) 903 217.1 9.8e-57
XP_016874751 (OMIM: 147440,608747) PREDICTED: insu ( 175) 779 188.4 4.4e-48
XP_016874748 (OMIM: 147440,608747) PREDICTED: insu ( 212) 779 188.5 5.2e-48
XP_016874750 (OMIM: 147440,608747) PREDICTED: insu ( 179) 778 188.2 5.3e-48
NP_001007140 (OMIM: 130650,147470,180860,194070,61 ( 180) 317 81.4 7.5e-16
NP_000603 (OMIM: 130650,147470,180860,194070,61648 ( 180) 317 81.4 7.5e-16
NP_001278791 (OMIM: 130650,147470,180860,194070,61 ( 180) 317 81.4 7.5e-16
NP_001278790 (OMIM: 130650,147470,180860,194070,61 ( 180) 317 81.4 7.5e-16
NP_001121070 (OMIM: 130650,147470,180860,194070,61 ( 236) 317 81.5 9.2e-16
>>NP_000609 (OMIM: 147440,608747) insulin-like growth fa (153 aa)
initn: 1058 init1: 1058 opt: 1058 Z-score: 1334.3 bits: 253.0 E(85289): 1.4e-67
Smith-Waterman score: 1058; 100.0% identity (100.0% similar) in 153 aa overlap (1-153:1-153)
10 20 30 40 50 60
pF1KB3 MGKISSLPTQLFKCCFCDFLKVKMHTMSSSHLFYLALCLLTFTSSATAGPETLCGAELVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MGKISSLPTQLFKCCFCDFLKVKMHTMSSSHLFYLALCLLTFTSSATAGPETLCGAELVD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 ALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKSARS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 ALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKSARS
70 80 90 100 110 120
130 140 150
pF1KB3 VRAQRHTDMPKTQKEVHLKNASRGSAGNKNYRM
:::::::::::::::::::::::::::::::::
NP_000 VRAQRHTDMPKTQKEVHLKNASRGSAGNKNYRM
130 140 150
>>NP_001104753 (OMIM: 147440,608747) insulin-like growth (158 aa)
initn: 934 init1: 934 opt: 934 Z-score: 1178.8 bits: 224.3 E(85289): 6.4e-59
Smith-Waterman score: 934; 100.0% identity (100.0% similar) in 134 aa overlap (1-134:1-134)
10 20 30 40 50 60
pF1KB3 MGKISSLPTQLFKCCFCDFLKVKMHTMSSSHLFYLALCLLTFTSSATAGPETLCGAELVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGKISSLPTQLFKCCFCDFLKVKMHTMSSSHLFYLALCLLTFTSSATAGPETLCGAELVD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 ALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKSARS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKSARS
70 80 90 100 110 120
130 140 150
pF1KB3 VRAQRHTDMPKTQKEVHLKNASRGSAGNKNYRM
::::::::::::::
NP_001 VRAQRHTDMPKTQKYQPPSTNKNTKSQRRKGSTFEERK
130 140 150
>>NP_001104755 (OMIM: 147440,608747) insulin-like growth (195 aa)
initn: 934 init1: 934 opt: 934 Z-score: 1177.6 bits: 224.3 E(85289): 7.5e-59
Smith-Waterman score: 934; 100.0% identity (100.0% similar) in 134 aa overlap (1-134:1-134)
10 20 30 40 50 60
pF1KB3 MGKISSLPTQLFKCCFCDFLKVKMHTMSSSHLFYLALCLLTFTSSATAGPETLCGAELVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGKISSLPTQLFKCCFCDFLKVKMHTMSSSHLFYLALCLLTFTSSATAGPETLCGAELVD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 ALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKSARS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKSARS
70 80 90 100 110 120
130 140 150
pF1KB3 VRAQRHTDMPKTQKEVHLKNASRGSAGNKNYRM
::::::::::::::
NP_001 VRAQRHTDMPKTQKYQPPSTNKNTKSQRRKGWPKTHPGGEQKEGTEASLQIRGKKKEQRR
130 140 150 160 170 180
>>NP_001104754 (OMIM: 147440,608747) insulin-like growth (137 aa)
initn: 902 init1: 902 opt: 902 Z-score: 1139.6 bits: 216.8 E(85289): 9.7e-57
Smith-Waterman score: 902; 100.0% identity (100.0% similar) in 132 aa overlap (22-153:6-137)
10 20 30 40 50 60
pF1KB3 MGKISSLPTQLFKCCFCDFLKVKMHTMSSSHLFYLALCLLTFTSSATAGPETLCGAELVD
:::::::::::::::::::::::::::::::::::::::
NP_001 MITPTVKMHTMSSSHLFYLALCLLTFTSSATAGPETLCGAELVD
10 20 30 40
70 80 90 100 110 120
pF1KB3 ALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKSARS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKSARS
50 60 70 80 90 100
130 140 150
pF1KB3 VRAQRHTDMPKTQKEVHLKNASRGSAGNKNYRM
:::::::::::::::::::::::::::::::::
NP_001 VRAQRHTDMPKTQKEVHLKNASRGSAGNKNYRM
110 120 130
>>XP_016874752 (OMIM: 147440,608747) PREDICTED: insulin- (170 aa)
initn: 903 init1: 903 opt: 903 Z-score: 1139.6 bits: 217.1 E(85289): 9.8e-57
Smith-Waterman score: 903; 99.2% identity (100.0% similar) in 133 aa overlap (21-153:38-170)
10 20 30 40 50
pF1KB3 MGKISSLPTQLFKCCFCDFLKVKMHTMSSSHLFYLALCLLTFTSSATAGP
.:::::::::::::::::::::::::::::
XP_016 HVEKKKKKKFKVQVISTTPGKPGLESSLGKEVKMHTMSSSHLFYLALCLLTFTSSATAGP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB3 ETLCGAELVDALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ETLCGAELVDALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCA
70 80 90 100 110 120
120 130 140 150
pF1KB3 PLKPAKSARSVRAQRHTDMPKTQKEVHLKNASRGSAGNKNYRM
:::::::::::::::::::::::::::::::::::::::::::
XP_016 PLKPAKSARSVRAQRHTDMPKTQKEVHLKNASRGSAGNKNYRM
130 140 150 160 170
>>XP_016874751 (OMIM: 147440,608747) PREDICTED: insulin- (175 aa)
initn: 779 init1: 779 opt: 779 Z-score: 984.2 bits: 188.4 E(85289): 4.4e-48
Smith-Waterman score: 779; 99.1% identity (100.0% similar) in 114 aa overlap (21-134:38-151)
10 20 30 40 50
pF1KB3 MGKISSLPTQLFKCCFCDFLKVKMHTMSSSHLFYLALCLLTFTSSATAGP
.:::::::::::::::::::::::::::::
XP_016 HVEKKKKKKFKVQVISTTPGKPGLESSLGKEVKMHTMSSSHLFYLALCLLTFTSSATAGP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB3 ETLCGAELVDALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ETLCGAELVDALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCA
70 80 90 100 110 120
120 130 140 150
pF1KB3 PLKPAKSARSVRAQRHTDMPKTQKEVHLKNASRGSAGNKNYRM
::::::::::::::::::::::::
XP_016 PLKPAKSARSVRAQRHTDMPKTQKYQPPSTNKNTKSQRRKGSTFEERK
130 140 150 160 170
>>XP_016874748 (OMIM: 147440,608747) PREDICTED: insulin- (212 aa)
initn: 779 init1: 779 opt: 779 Z-score: 983.0 bits: 188.5 E(85289): 5.2e-48
Smith-Waterman score: 779; 99.1% identity (100.0% similar) in 114 aa overlap (21-134:38-151)
10 20 30 40 50
pF1KB3 MGKISSLPTQLFKCCFCDFLKVKMHTMSSSHLFYLALCLLTFTSSATAGP
.:::::::::::::::::::::::::::::
XP_016 HVEKKKKKKFKVQVISTTPGKPGLESSLGKEVKMHTMSSSHLFYLALCLLTFTSSATAGP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB3 ETLCGAELVDALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ETLCGAELVDALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCA
70 80 90 100 110 120
120 130 140 150
pF1KB3 PLKPAKSARSVRAQRHTDMPKTQKEVHLKNASRGSAGNKNYRM
::::::::::::::::::::::::
XP_016 PLKPAKSARSVRAQRHTDMPKTQKYQPPSTNKNTKSQRRKGWPKTHPGGEQKEGTEASLQ
130 140 150 160 170 180
>>XP_016874750 (OMIM: 147440,608747) PREDICTED: insulin- (179 aa)
initn: 778 init1: 778 opt: 778 Z-score: 982.8 bits: 188.2 E(85289): 5.3e-48
Smith-Waterman score: 778; 100.0% identity (100.0% similar) in 113 aa overlap (22-134:6-118)
10 20 30 40 50 60
pF1KB3 MGKISSLPTQLFKCCFCDFLKVKMHTMSSSHLFYLALCLLTFTSSATAGPETLCGAELVD
:::::::::::::::::::::::::::::::::::::::
XP_016 MITPTVKMHTMSSSHLFYLALCLLTFTSSATAGPETLCGAELVD
10 20 30 40
70 80 90 100 110 120
pF1KB3 ALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKSARS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKSARS
50 60 70 80 90 100
130 140 150
pF1KB3 VRAQRHTDMPKTQKEVHLKNASRGSAGNKNYRM
::::::::::::::
XP_016 VRAQRHTDMPKTQKYQPPSTNKNTKSQRRKGWPKTHPGGEQKEGTEASLQIRGKKKEQRR
110 120 130 140 150 160
>>NP_001007140 (OMIM: 130650,147470,180860,194070,616489 (180 aa)
initn: 319 init1: 168 opt: 317 Z-score: 405.6 bits: 81.4 E(85289): 7.5e-16
Smith-Waterman score: 317; 58.2% identity (74.5% similar) in 98 aa overlap (27-121:5-94)
10 20 30 40 50
pF1KB3 MGKISSLPTQLFKCCFCDFLKVKMHTMSSSHLFYLALCLLTFTSSATAG--P-ETLCGAE
:..: : :.. :.:.: :. : :::::.:
NP_001 MGIPMGKSMLVLLTF--LAFASCCIAAYRPSETLCGGE
10 20 30
60 70 80 90 100 110
pF1KB3 LVDALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKS
:::.::::::::::::..:.. :::. :::.::::::::: :: ::: ::::
NP_001 LVDTLQFVCGDRGFYFSRPASR--VSRRS--RGIVEECCFRSCDLALLETYCA--TPAKS
40 50 60 70 80 90
120 130 140 150
pF1KB3 ARSVRAQRHTDMPKTQKEVHLKNASRGSAGNKNYRM
:.:
NP_001 ERDVSTPPTVLPDNFPRYPVGKFFQYDTWKQSTQRLRRGLPALLRARRGHVLAKELEAFR
100 110 120 130 140 150
>>NP_000603 (OMIM: 130650,147470,180860,194070,616489) i (180 aa)
initn: 319 init1: 168 opt: 317 Z-score: 405.6 bits: 81.4 E(85289): 7.5e-16
Smith-Waterman score: 317; 58.2% identity (74.5% similar) in 98 aa overlap (27-121:5-94)
10 20 30 40 50
pF1KB3 MGKISSLPTQLFKCCFCDFLKVKMHTMSSSHLFYLALCLLTFTSSATAG--P-ETLCGAE
:..: : :.. :.:.: :. : :::::.:
NP_000 MGIPMGKSMLVLLTF--LAFASCCIAAYRPSETLCGGE
10 20 30
60 70 80 90 100 110
pF1KB3 LVDALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKS
:::.::::::::::::..:.. :::. :::.::::::::: :: ::: ::::
NP_000 LVDTLQFVCGDRGFYFSRPASR--VSRRS--RGIVEECCFRSCDLALLETYCA--TPAKS
40 50 60 70 80 90
120 130 140 150
pF1KB3 ARSVRAQRHTDMPKTQKEVHLKNASRGSAGNKNYRM
:.:
NP_000 ERDVSTPPTVLPDNFPRYPVGKFFQYDTWKQSTQRLRRGLPALLRARRGHVLAKELEAFR
100 110 120 130 140 150
153 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 14:10:09 2016 done: Thu Nov 3 14:10:10 2016
Total Scan time: 5.430 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]