FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB3940, 171 aa 1>>>pF1KB3940 171 - 171 aa - 171 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.1185+/-0.000742; mu= 13.2933+/- 0.045 mean_var=55.8118+/-11.153, 0's: 0 Z-trim(107.6): 13 B-trim: 109 in 1/49 Lambda= 0.171677 statistics sampled from 9688 (9696) to 9688 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.698), E-opt: 0.2 (0.298), width: 16 Scan time: 1.930 The best scores are: opt bits E(32554) CCDS9043.1 BTG1 gene_id:694|Hs108|chr12 ( 171) 1139 289.7 5.9e-79 CCDS1437.1 BTG2 gene_id:7832|Hs108|chr1 ( 158) 620 161.2 2.7e-40 CCDS11576.1 TOB1 gene_id:10140|Hs108|chr17 ( 345) 363 97.6 7.8e-21 CCDS14015.1 TOB2 gene_id:10766|Hs108|chr22 ( 344) 360 96.9 1.3e-20 CCDS13569.1 BTG3 gene_id:10950|Hs108|chr21 ( 252) 301 82.2 2.5e-16 CCDS46636.1 BTG3 gene_id:10950|Hs108|chr21 ( 296) 291 79.8 1.6e-15 CCDS8346.1 BTG4 gene_id:54766|Hs108|chr11 ( 223) 269 74.3 5.4e-14 >>CCDS9043.1 BTG1 gene_id:694|Hs108|chr12 (171 aa) initn: 1139 init1: 1139 opt: 1139 Z-score: 1531.0 bits: 289.7 E(32554): 5.9e-79 Smith-Waterman score: 1139; 100.0% identity (100.0% similar) in 171 aa overlap (1-171:1-171) 10 20 30 40 50 60 pF1KB3 MHPFYTRAATMIGEIAAAVSFISKFLRTKGLTSERQLQTFSQSLQELLAEHYKHHWFPEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 MHPFYTRAATMIGEIAAAVSFISKFLRTKGLTSERQLQTFSQSLQELLAEHYKHHWFPEK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB3 PCKGSGYRCIRINHKMDPLIGQAAQRIGLSSQELFRLLPSELTLWVDPYEVSYRIGEDGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 PCKGSGYRCIRINHKMDPLIGQAAQRIGLSSQELFRLLPSELTLWVDPYEVSYRIGEDGS 70 80 90 100 110 120 130 140 150 160 170 pF1KB3 ICVLYEASPAGGSTQNSTNVQMVDSRISCKEELLLGRTSPSKNYNMMTVSG ::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 ICVLYEASPAGGSTQNSTNVQMVDSRISCKEELLLGRTSPSKNYNMMTVSG 130 140 150 160 170 >>CCDS1437.1 BTG2 gene_id:7832|Hs108|chr1 (158 aa) initn: 693 init1: 611 opt: 620 Z-score: 836.9 bits: 161.2 E(32554): 2.7e-40 Smith-Waterman score: 686; 63.4% identity (86.0% similar) in 164 aa overlap (7-170:5-157) 10 20 30 40 50 60 pF1KB3 MHPFYTRAATMIGEIAAAVSFISKFLRTKGLTSERQLQTFSQSLQELLAEHYKHHWFPEK ... :. ::::::.:.:..:::.: .::..:..:: .::: :.::::::::::: CCDS14 MSHGKGTDMLPEIAAAVGFLSSLLRTRGCVSEQRLKVFSGALQEALTEHYKHHWFPEK 10 20 30 40 50 70 80 90 100 110 120 pF1KB3 PCKGSGYRCIRINHKMDPLIGQAAQRIGLSSQELFRLLPSELTLWVDPYEVSYRIGEDGS : ::::::::::::::::.:...:..::::. .: .:::::::::::::::::::::::: CCDS14 PSKGSGYRCIRINHKMDPIISRVASQIGLSQPQLHQLLPSELTLWVDPYEVSYRIGEDGS 60 70 80 90 100 110 130 140 150 160 170 pF1KB3 ICVLYEASPAGGSTQNSTNVQMVDSRISCKEELLLGRTSPSKNYNMMTVSG :::::: .: ..: . ..::...::::.:::::: .:.:: CCDS14 ICVLYEEAPLAASC----------GLLTCKNQVLLGRSSPSKNY-VMAVSS 120 130 140 150 >>CCDS11576.1 TOB1 gene_id:10140|Hs108|chr17 (345 aa) initn: 365 init1: 338 opt: 363 Z-score: 487.5 bits: 97.6 E(32554): 7.8e-21 Smith-Waterman score: 363; 46.4% identity (81.2% similar) in 112 aa overlap (14-125:4-113) 10 20 30 40 50 60 pF1KB3 MHPFYTRAATMIGEIAAAVSFISKFLRTKGLTSERQLQTFSQSLQELLAEHYKHHWFPEK :: .:..:: ..: .: .:... :.. :..:: ..:. ::.::: CCDS11 MQLEIQVALNFIISYLYNK--LPRRRVNIFGEELERLLKKKYEGHWYPEK 10 20 30 40 70 80 90 100 110 120 pF1KB3 PCKGSGYRCIRINHKMDPLIGQAAQRIGLSSQELFRLLPSELTLWVDPYEVSYRIGEDGS : ::::.:::.:..:.::.: ::... ::. ... ::..:..:.::.::::.::: : CCDS11 PYKGSGFRCIHIGEKVDPVIEQASKESGLDIDDVRGNLPQDLSVWIDPFEVSYQIGEKGP 50 60 70 80 90 100 130 140 150 160 170 pF1KB3 ICVLYEASPAGGSTQNSTNVQMVDSRISCKEELLLGRTSPSKNYNMMTVSG . ::: CCDS11 VKVLYVDDNNENGCELDKEIKNSFNPEAQVFMPISDPASSVSSSPSPPFGHSAAVSPTFM 110 120 130 140 150 160 >>CCDS14015.1 TOB2 gene_id:10766|Hs108|chr22 (344 aa) initn: 361 init1: 334 opt: 360 Z-score: 483.5 bits: 96.9 E(32554): 1.3e-20 Smith-Waterman score: 360; 43.2% identity (76.3% similar) in 118 aa overlap (14-131:4-119) 10 20 30 40 50 60 pF1KB3 MHPFYTRAATMIGEIAAAVSFISKFLRTKGLTSERQLQTFSQSLQELLAEHYKHHWFPEK :: .:..:: ..: .: .:. . :.. :..:: ..:. ::.::: CCDS14 MQLEIKVALNFIISYLYNK--LPRRRADLFGEELERLLKKKYEGHWYPEK 10 20 30 40 70 80 90 100 110 120 pF1KB3 PCKGSGYRCIRINHKMDPLIGQAAQRIGLSSQELFRLLPSELTLWVDPYEVSYRIGEDGS : ::::.::..:.. .::.. ::.: ::. ... .: ::..:.::.::::.::: :. CCDS14 PLKGSGFRCVHIGEMVDPVVELAAKRSGLAVEDVRANVPEELSVWIDPFEVSYQIGEKGA 50 60 70 80 90 100 130 140 150 160 170 pF1KB3 ICVLYEASPAGGSTQNSTNVQMVDSRISCKEELLLGRTSPSKNYNMMTVSG . ::: . : CCDS14 VKVLYLDDSEGCGAPELDKEIKSSFNPDAQVFVPIGSQDSSLSNSPSPSFGQSPSPTFIP 110 120 130 140 150 160 >>CCDS13569.1 BTG3 gene_id:10950|Hs108|chr21 (252 aa) initn: 247 init1: 247 opt: 301 Z-score: 406.7 bits: 82.2 E(32554): 2.5e-16 Smith-Waterman score: 301; 40.5% identity (72.4% similar) in 116 aa overlap (11-124:1-114) 10 20 30 40 50 60 pF1KB3 MHPFYTRAATMIGEIAAAVSFISKFLRTKGLTSERQLQTFSQSLQELLAEHYKHHWFPEK : .::::.: :.....: . ... .. :...: .: :.::.::.::: CCDS13 MKNEIAAVVFFFTRLVRKHDKLKKEAVERFAEKLTLILQEKYKNHWYPEK 10 20 30 40 50 70 80 90 100 110 pF1KB3 PCKGSGYRCIRIN--HKMDPLIGQAAQRIGLSSQELFRLLPSELTLWVDPYEVSYRIGED : ::..:::::.: ...:: . .: . . ..: ::.:::::::: :: : :: CCDS13 PSKGQAYRCIRVNKFQRVDPDVLKACENSCILYSDLG--LPKELTLWVDPCEVCCRYGEK 60 70 80 90 100 120 130 140 150 160 170 pF1KB3 GSICVLYEASPAGGSTQNSTNVQMVDSRISCKEELLLGRTSPSKNYNMMTVSG .. .. CCDS13 NNAFIVASFENKDENKDEISRKVTRALDKVTSDYHSGSSSSDEETSKEMEVKPSSVTAAA 110 120 130 140 150 160 >>CCDS46636.1 BTG3 gene_id:10950|Hs108|chr21 (296 aa) initn: 236 init1: 236 opt: 291 Z-score: 392.2 bits: 79.8 E(32554): 1.6e-15 Smith-Waterman score: 291; 42.6% identity (72.2% similar) in 115 aa overlap (11-122:1-111) 10 20 30 40 50 60 pF1KB3 MHPFYTRAATMIGEIAAAVSFISKFLRTKGLTSERQLQTFSQSLQELLAEHYKHHWFPEK : .::::.: :.....: . ... .. :...: .: :.::.::.::: CCDS46 MKNEIAAVVFFFTRLVRKHDKLKKEAVERFAEKLTLILQEKYKNHWYPEK 10 20 30 40 50 70 80 90 100 110 pF1KB3 PCKGSGYRCIRIN--HKMDPLIGQAAQRIGLSSQELFRLLPSELTLWVDPYEVSYRIGED : ::..:::::.: ...:: . .: . . ..: ::.:::::::: :: : .: CCDS46 PSKGQAYRCIRVNKFQRVDPDVLKACENSCILYSDLG--LPKELTLWVDPCEVCCR--RD 60 70 80 90 100 120 130 140 150 160 170 pF1KB3 G-SICVLYEASPAGGSTQNSTNVQMVDSRISCKEELLLGRTSPSKNYNMMTVSG : : : CCDS46 GVSPCWPDCSQTPDLVIRPPWPPKALDYRREPLRPASSFLIMYGEKNNAFIVASFENKDE 110 120 130 140 150 160 >>CCDS8346.1 BTG4 gene_id:54766|Hs108|chr11 (223 aa) initn: 228 init1: 207 opt: 269 Z-score: 364.7 bits: 74.3 E(32554): 5.4e-14 Smith-Waterman score: 269; 37.6% identity (73.4% similar) in 109 aa overlap (11-117:1-107) 10 20 30 40 50 60 pF1KB3 MHPFYTRAATMIGEIAAAVSFISKFLRTKGLTSERQLQTFSQSLQELLAEHYKHHWFPEK : :::..: :...... . :..:.. :...:. .: : :. :: . CCDS83 MRDEIATTVFFVTRLVKKHDKLSKQQIEDFAEKLMTILFETYRSHWHSDC 10 20 30 40 50 70 80 90 100 110 pF1KB3 PCKGSGYRCIRINHKM--DPLIGQAAQRIGLSSQELFRLLPSELTLWVDPYEVSYRIGED : ::...::::::... ::.. .: . ... ..: ::.:.:.::::.:: : :: CCDS83 PSKGQAFRCIRINNNQNKDPILERACVESNVDFSHL--GLPKEMTIWVDPFEVCCRYGEK 60 70 80 90 100 120 130 140 150 160 170 pF1KB3 GSICVLYEASPAGGSTQNSTNVQMVDSRISCKEELLLGRTSPSKNYNMMTVSG CCDS83 NHPFTVASFKGRWEEWELYQQISYAVSRASSDVSSGTSCDEESCSKEPRVIPKVSNPKSI 110 120 130 140 150 160 171 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 05:27:46 2016 done: Sat Nov 5 05:27:46 2016 Total Scan time: 1.930 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]