Result of FASTA (omim) for
pF1KB3940
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3940, 171 aa
1>>>pF1KB3940 171 - 171 aa - 171 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9416+/-0.000334; mu= 14.4758+/- 0.021
mean_var=59.9925+/-12.304, 0's: 0 Z-trim(114.9): 20 B-trim: 1228 in 1/52
Lambda= 0.165587
statistics sampled from 24950 (24969) to 24950 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.687), E-opt: 0.2 (0.293), width: 16
Scan time: 5.610
The best scores are: opt bits E(85289)
NP_001722 (OMIM: 109580) protein BTG1 [Homo sapien ( 171) 1139 280.0 1.3e-75
NP_006754 (OMIM: 601597) protein BTG2 [Homo sapien ( 158) 620 156.0 2.5e-38
NP_001230806 (OMIM: 605523) protein Tob1 isoform 1 ( 345) 363 94.8 1.4e-19
NP_005740 (OMIM: 605523) protein Tob1 isoform 1 [H ( 345) 363 94.8 1.4e-19
XP_016884028 (OMIM: 607396) PREDICTED: protein Tob ( 344) 360 94.1 2.4e-19
XP_006724168 (OMIM: 607396) PREDICTED: protein Tob ( 344) 360 94.1 2.4e-19
NP_057356 (OMIM: 607396) protein Tob2 [Homo sapien ( 344) 360 94.1 2.4e-19
XP_005261372 (OMIM: 607396) PREDICTED: protein Tob ( 344) 360 94.1 2.4e-19
NP_006797 (OMIM: 605674) protein BTG3 isoform b [H ( 252) 301 79.9 3.2e-15
XP_016883754 (OMIM: 605674) PREDICTED: protein BTG ( 252) 301 79.9 3.2e-15
XP_016883755 (OMIM: 605674) PREDICTED: protein BTG ( 252) 301 79.9 3.2e-15
XP_011527743 (OMIM: 605674) PREDICTED: protein BTG ( 306) 297 79.0 7.3e-15
NP_001124386 (OMIM: 605674) protein BTG3 isoform a ( 296) 291 77.6 1.9e-14
NP_060059 (OMIM: 605673) protein BTG4 [Homo sapien ( 223) 269 72.2 5.8e-13
XP_011541182 (OMIM: 605673) PREDICTED: protein BTG ( 226) 269 72.2 5.9e-13
XP_011541181 (OMIM: 605673) PREDICTED: protein BTG ( 244) 269 72.3 6.3e-13
XP_011541180 (OMIM: 605673) PREDICTED: protein BTG ( 255) 269 72.3 6.5e-13
XP_011541178 (OMIM: 605673) PREDICTED: protein BTG ( 273) 269 72.3 6.9e-13
>>NP_001722 (OMIM: 109580) protein BTG1 [Homo sapiens] (171 aa)
initn: 1139 init1: 1139 opt: 1139 Z-score: 1478.6 bits: 280.0 E(85289): 1.3e-75
Smith-Waterman score: 1139; 100.0% identity (100.0% similar) in 171 aa overlap (1-171:1-171)
10 20 30 40 50 60
pF1KB3 MHPFYTRAATMIGEIAAAVSFISKFLRTKGLTSERQLQTFSQSLQELLAEHYKHHWFPEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MHPFYTRAATMIGEIAAAVSFISKFLRTKGLTSERQLQTFSQSLQELLAEHYKHHWFPEK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 PCKGSGYRCIRINHKMDPLIGQAAQRIGLSSQELFRLLPSELTLWVDPYEVSYRIGEDGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PCKGSGYRCIRINHKMDPLIGQAAQRIGLSSQELFRLLPSELTLWVDPYEVSYRIGEDGS
70 80 90 100 110 120
130 140 150 160 170
pF1KB3 ICVLYEASPAGGSTQNSTNVQMVDSRISCKEELLLGRTSPSKNYNMMTVSG
:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ICVLYEASPAGGSTQNSTNVQMVDSRISCKEELLLGRTSPSKNYNMMTVSG
130 140 150 160 170
>>NP_006754 (OMIM: 601597) protein BTG2 [Homo sapiens] (158 aa)
initn: 693 init1: 611 opt: 620 Z-score: 809.1 bits: 156.0 E(85289): 2.5e-38
Smith-Waterman score: 686; 63.4% identity (86.0% similar) in 164 aa overlap (7-170:5-157)
10 20 30 40 50 60
pF1KB3 MHPFYTRAATMIGEIAAAVSFISKFLRTKGLTSERQLQTFSQSLQELLAEHYKHHWFPEK
... :. ::::::.:.:..:::.: .::..:..:: .::: :.:::::::::::
NP_006 MSHGKGTDMLPEIAAAVGFLSSLLRTRGCVSEQRLKVFSGALQEALTEHYKHHWFPEK
10 20 30 40 50
70 80 90 100 110 120
pF1KB3 PCKGSGYRCIRINHKMDPLIGQAAQRIGLSSQELFRLLPSELTLWVDPYEVSYRIGEDGS
: ::::::::::::::::.:...:..::::. .: .::::::::::::::::::::::::
NP_006 PSKGSGYRCIRINHKMDPIISRVASQIGLSQPQLHQLLPSELTLWVDPYEVSYRIGEDGS
60 70 80 90 100 110
130 140 150 160 170
pF1KB3 ICVLYEASPAGGSTQNSTNVQMVDSRISCKEELLLGRTSPSKNYNMMTVSG
:::::: .: ..: . ..::...::::.:::::: .:.::
NP_006 ICVLYEEAPLAASC----------GLLTCKNQVLLGRSSPSKNY-VMAVSS
120 130 140 150
>>NP_001230806 (OMIM: 605523) protein Tob1 isoform 1 [Ho (345 aa)
initn: 365 init1: 338 opt: 363 Z-score: 472.3 bits: 94.8 E(85289): 1.4e-19
Smith-Waterman score: 363; 46.4% identity (81.2% similar) in 112 aa overlap (14-125:4-113)
10 20 30 40 50 60
pF1KB3 MHPFYTRAATMIGEIAAAVSFISKFLRTKGLTSERQLQTFSQSLQELLAEHYKHHWFPEK
:: .:..:: ..: .: .:... :.. :..:: ..:. ::.:::
NP_001 MQLEIQVALNFIISYLYNK--LPRRRVNIFGEELERLLKKKYEGHWYPEK
10 20 30 40
70 80 90 100 110 120
pF1KB3 PCKGSGYRCIRINHKMDPLIGQAAQRIGLSSQELFRLLPSELTLWVDPYEVSYRIGEDGS
: ::::.:::.:..:.::.: ::... ::. ... ::..:..:.::.::::.::: :
NP_001 PYKGSGFRCIHIGEKVDPVIEQASKESGLDIDDVRGNLPQDLSVWIDPFEVSYQIGEKGP
50 60 70 80 90 100
130 140 150 160 170
pF1KB3 ICVLYEASPAGGSTQNSTNVQMVDSRISCKEELLLGRTSPSKNYNMMTVSG
. :::
NP_001 VKVLYVDDNNENGCELDKEIKNSFNPEAQVFMPISDPASSVSSSPSPPFGHSAAVSPTFM
110 120 130 140 150 160
>>NP_005740 (OMIM: 605523) protein Tob1 isoform 1 [Homo (345 aa)
initn: 365 init1: 338 opt: 363 Z-score: 472.3 bits: 94.8 E(85289): 1.4e-19
Smith-Waterman score: 363; 46.4% identity (81.2% similar) in 112 aa overlap (14-125:4-113)
10 20 30 40 50 60
pF1KB3 MHPFYTRAATMIGEIAAAVSFISKFLRTKGLTSERQLQTFSQSLQELLAEHYKHHWFPEK
:: .:..:: ..: .: .:... :.. :..:: ..:. ::.:::
NP_005 MQLEIQVALNFIISYLYNK--LPRRRVNIFGEELERLLKKKYEGHWYPEK
10 20 30 40
70 80 90 100 110 120
pF1KB3 PCKGSGYRCIRINHKMDPLIGQAAQRIGLSSQELFRLLPSELTLWVDPYEVSYRIGEDGS
: ::::.:::.:..:.::.: ::... ::. ... ::..:..:.::.::::.::: :
NP_005 PYKGSGFRCIHIGEKVDPVIEQASKESGLDIDDVRGNLPQDLSVWIDPFEVSYQIGEKGP
50 60 70 80 90 100
130 140 150 160 170
pF1KB3 ICVLYEASPAGGSTQNSTNVQMVDSRISCKEELLLGRTSPSKNYNMMTVSG
. :::
NP_005 VKVLYVDDNNENGCELDKEIKNSFNPEAQVFMPISDPASSVSSSPSPPFGHSAAVSPTFM
110 120 130 140 150 160
>>XP_016884028 (OMIM: 607396) PREDICTED: protein Tob2 is (344 aa)
initn: 361 init1: 334 opt: 360 Z-score: 468.4 bits: 94.1 E(85289): 2.4e-19
Smith-Waterman score: 360; 43.2% identity (76.3% similar) in 118 aa overlap (14-131:4-119)
10 20 30 40 50 60
pF1KB3 MHPFYTRAATMIGEIAAAVSFISKFLRTKGLTSERQLQTFSQSLQELLAEHYKHHWFPEK
:: .:..:: ..: .: .:. . :.. :..:: ..:. ::.:::
XP_016 MQLEIKVALNFIISYLYNK--LPRRRADLFGEELERLLKKKYEGHWYPEK
10 20 30 40
70 80 90 100 110 120
pF1KB3 PCKGSGYRCIRINHKMDPLIGQAAQRIGLSSQELFRLLPSELTLWVDPYEVSYRIGEDGS
: ::::.::..:.. .::.. ::.: ::. ... .: ::..:.::.::::.::: :.
XP_016 PLKGSGFRCVHIGEMVDPVVELAAKRSGLAVEDVRANVPEELSVWIDPFEVSYQIGEKGA
50 60 70 80 90 100
130 140 150 160 170
pF1KB3 ICVLYEASPAGGSTQNSTNVQMVDSRISCKEELLLGRTSPSKNYNMMTVSG
. ::: . :
XP_016 VKVLYLDDSEGCGAPELDKEIKSSFNPDAQVFVPIGSQDSSLSNSPSPSFGQSPSPTFIP
110 120 130 140 150 160
>>XP_006724168 (OMIM: 607396) PREDICTED: protein Tob2 is (344 aa)
initn: 361 init1: 334 opt: 360 Z-score: 468.4 bits: 94.1 E(85289): 2.4e-19
Smith-Waterman score: 360; 43.2% identity (76.3% similar) in 118 aa overlap (14-131:4-119)
10 20 30 40 50 60
pF1KB3 MHPFYTRAATMIGEIAAAVSFISKFLRTKGLTSERQLQTFSQSLQELLAEHYKHHWFPEK
:: .:..:: ..: .: .:. . :.. :..:: ..:. ::.:::
XP_006 MQLEIKVALNFIISYLYNK--LPRRRADLFGEELERLLKKKYEGHWYPEK
10 20 30 40
70 80 90 100 110 120
pF1KB3 PCKGSGYRCIRINHKMDPLIGQAAQRIGLSSQELFRLLPSELTLWVDPYEVSYRIGEDGS
: ::::.::..:.. .::.. ::.: ::. ... .: ::..:.::.::::.::: :.
XP_006 PLKGSGFRCVHIGEMVDPVVELAAKRSGLAVEDVRANVPEELSVWIDPFEVSYQIGEKGA
50 60 70 80 90 100
130 140 150 160 170
pF1KB3 ICVLYEASPAGGSTQNSTNVQMVDSRISCKEELLLGRTSPSKNYNMMTVSG
. ::: . :
XP_006 VKVLYLDDSEGCGAPELDKEIKSSFNPDAQVFVPIGSQDSSLSNSPSPSFGQSPSPTFIP
110 120 130 140 150 160
>>NP_057356 (OMIM: 607396) protein Tob2 [Homo sapiens] (344 aa)
initn: 361 init1: 334 opt: 360 Z-score: 468.4 bits: 94.1 E(85289): 2.4e-19
Smith-Waterman score: 360; 43.2% identity (76.3% similar) in 118 aa overlap (14-131:4-119)
10 20 30 40 50 60
pF1KB3 MHPFYTRAATMIGEIAAAVSFISKFLRTKGLTSERQLQTFSQSLQELLAEHYKHHWFPEK
:: .:..:: ..: .: .:. . :.. :..:: ..:. ::.:::
NP_057 MQLEIKVALNFIISYLYNK--LPRRRADLFGEELERLLKKKYEGHWYPEK
10 20 30 40
70 80 90 100 110 120
pF1KB3 PCKGSGYRCIRINHKMDPLIGQAAQRIGLSSQELFRLLPSELTLWVDPYEVSYRIGEDGS
: ::::.::..:.. .::.. ::.: ::. ... .: ::..:.::.::::.::: :.
NP_057 PLKGSGFRCVHIGEMVDPVVELAAKRSGLAVEDVRANVPEELSVWIDPFEVSYQIGEKGA
50 60 70 80 90 100
130 140 150 160 170
pF1KB3 ICVLYEASPAGGSTQNSTNVQMVDSRISCKEELLLGRTSPSKNYNMMTVSG
. ::: . :
NP_057 VKVLYLDDSEGCGAPELDKEIKSSFNPDAQVFVPIGSQDSSLSNSPSPSFGQSPSPTFIP
110 120 130 140 150 160
>>XP_005261372 (OMIM: 607396) PREDICTED: protein Tob2 is (344 aa)
initn: 361 init1: 334 opt: 360 Z-score: 468.4 bits: 94.1 E(85289): 2.4e-19
Smith-Waterman score: 360; 43.2% identity (76.3% similar) in 118 aa overlap (14-131:4-119)
10 20 30 40 50 60
pF1KB3 MHPFYTRAATMIGEIAAAVSFISKFLRTKGLTSERQLQTFSQSLQELLAEHYKHHWFPEK
:: .:..:: ..: .: .:. . :.. :..:: ..:. ::.:::
XP_005 MQLEIKVALNFIISYLYNK--LPRRRADLFGEELERLLKKKYEGHWYPEK
10 20 30 40
70 80 90 100 110 120
pF1KB3 PCKGSGYRCIRINHKMDPLIGQAAQRIGLSSQELFRLLPSELTLWVDPYEVSYRIGEDGS
: ::::.::..:.. .::.. ::.: ::. ... .: ::..:.::.::::.::: :.
XP_005 PLKGSGFRCVHIGEMVDPVVELAAKRSGLAVEDVRANVPEELSVWIDPFEVSYQIGEKGA
50 60 70 80 90 100
130 140 150 160 170
pF1KB3 ICVLYEASPAGGSTQNSTNVQMVDSRISCKEELLLGRTSPSKNYNMMTVSG
. ::: . :
XP_005 VKVLYLDDSEGCGAPELDKEIKSSFNPDAQVFVPIGSQDSSLSNSPSPSFGQSPSPTFIP
110 120 130 140 150 160
>>NP_006797 (OMIM: 605674) protein BTG3 isoform b [Homo (252 aa)
initn: 247 init1: 247 opt: 301 Z-score: 394.2 bits: 79.9 E(85289): 3.2e-15
Smith-Waterman score: 301; 40.5% identity (72.4% similar) in 116 aa overlap (11-124:1-114)
10 20 30 40 50 60
pF1KB3 MHPFYTRAATMIGEIAAAVSFISKFLRTKGLTSERQLQTFSQSLQELLAEHYKHHWFPEK
: .::::.: :.....: . ... .. :...: .: :.::.::.:::
NP_006 MKNEIAAVVFFFTRLVRKHDKLKKEAVERFAEKLTLILQEKYKNHWYPEK
10 20 30 40 50
70 80 90 100 110
pF1KB3 PCKGSGYRCIRIN--HKMDPLIGQAAQRIGLSSQELFRLLPSELTLWVDPYEVSYRIGED
: ::..:::::.: ...:: . .: . . ..: ::.:::::::: :: : ::
NP_006 PSKGQAYRCIRVNKFQRVDPDVLKACENSCILYSDLG--LPKELTLWVDPCEVCCRYGEK
60 70 80 90 100
120 130 140 150 160 170
pF1KB3 GSICVLYEASPAGGSTQNSTNVQMVDSRISCKEELLLGRTSPSKNYNMMTVSG
.. ..
NP_006 NNAFIVASFENKDENKDEISRKVTRALDKVTSDYHSGSSSSDEETSKEMEVKPSSVTAAA
110 120 130 140 150 160
>>XP_016883754 (OMIM: 605674) PREDICTED: protein BTG3 is (252 aa)
initn: 247 init1: 247 opt: 301 Z-score: 394.2 bits: 79.9 E(85289): 3.2e-15
Smith-Waterman score: 301; 40.5% identity (72.4% similar) in 116 aa overlap (11-124:1-114)
10 20 30 40 50 60
pF1KB3 MHPFYTRAATMIGEIAAAVSFISKFLRTKGLTSERQLQTFSQSLQELLAEHYKHHWFPEK
: .::::.: :.....: . ... .. :...: .: :.::.::.:::
XP_016 MKNEIAAVVFFFTRLVRKHDKLKKEAVERFAEKLTLILQEKYKNHWYPEK
10 20 30 40 50
70 80 90 100 110
pF1KB3 PCKGSGYRCIRIN--HKMDPLIGQAAQRIGLSSQELFRLLPSELTLWVDPYEVSYRIGED
: ::..:::::.: ...:: . .: . . ..: ::.:::::::: :: : ::
XP_016 PSKGQAYRCIRVNKFQRVDPDVLKACENSCILYSDLG--LPKELTLWVDPCEVCCRYGEK
60 70 80 90 100
120 130 140 150 160 170
pF1KB3 GSICVLYEASPAGGSTQNSTNVQMVDSRISCKEELLLGRTSPSKNYNMMTVSG
.. ..
XP_016 NNAFIVASFENKDENKDEISRKVTRALDKVTSDYHSGSSSSDEETSKEMEVKPSSVTAAA
110 120 130 140 150 160
171 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 05:27:46 2016 done: Sat Nov 5 05:27:47 2016
Total Scan time: 5.610 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]