Result of FASTA (ccds) for
pF1KB3955
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3955, 454 aa
1>>>pF1KB3955 454 - 454 aa - 454 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.0891+/-0.000986; mu= -4.1874+/- 0.059
mean_var=247.8571+/-50.256, 0's: 0 Z-trim(113.3): 75 B-trim: 0 in 0/52
Lambda= 0.081465
statistics sampled from 13871 (13941) to 13871 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.765), E-opt: 0.2 (0.428), width: 16
Scan time: 3.070
The best scores are: opt bits E(32554)
CCDS55087.1 ETV1 gene_id:2115|Hs108|chr7 ( 454) 3248 394.7 1e-109
CCDS55088.1 ETV1 gene_id:2115|Hs108|chr7 ( 477) 1905 236.9 3.5e-62
CCDS55085.1 ETV1 gene_id:2115|Hs108|chr7 ( 437) 1492 188.3 1.3e-47
CCDS55084.1 ETV1 gene_id:2115|Hs108|chr7 ( 374) 1443 182.5 6.4e-46
CCDS55083.1 ETV1 gene_id:2115|Hs108|chr7 ( 419) 1371 174.1 2.5e-43
CCDS55086.1 ETV1 gene_id:2115|Hs108|chr7 ( 459) 1365 173.4 4.4e-43
CCDS33906.1 ETV5 gene_id:2119|Hs108|chr3 ( 510) 1139 146.8 4.7e-35
CCDS58553.1 ETV4 gene_id:2118|Hs108|chr17 ( 445) 1084 140.3 3.7e-33
CCDS11465.1 ETV4 gene_id:2118|Hs108|chr17 ( 484) 1084 140.4 4e-33
CCDS59292.1 ETV4 gene_id:2118|Hs108|chr17 ( 207) 1007 131.1 1.1e-30
>>CCDS55087.1 ETV1 gene_id:2115|Hs108|chr7 (454 aa)
initn: 3248 init1: 3248 opt: 3248 Z-score: 2083.1 bits: 394.7 E(32554): 1e-109
Smith-Waterman score: 3248; 99.8% identity (100.0% similar) in 454 aa overlap (1-454:1-454)
10 20 30 40 50 60
pF1KB3 MDGFYDQQVPYMVTNSQRGRNCNEKPTNVRKRKFINRDLAHDSEELFQDLSQLQETWLAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MDGFYDQQVPYMVTNSQRGRNCNEKPTNVRKRKFINRDLAHDSEELFQDLSQLQETWLAE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 AQVPDNDEQFVPDYQAESLAFHGLPLKIKKEPHSPCSEIGSACSQEQPFKFSYGEKCLYN
:::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::
CCDS55 AQVPDNDEQFVPDYQAESLAFHGLPLKIKKEPHSPCSEISSACSQEQPFKFSYGEKCLYN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 VSAYDQKPQVGMRPSNPPTPSSTPVSPLHHASPNSTHTPKPDRAFPAHLPPSQSIPDSSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 VSAYDQKPQVGMRPSNPPTPSSTPVSPLHHASPNSTHTPKPDRAFPAHLPPSQSIPDSSY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 PMDHRFRRQLSEPCNSFPPLPTMPREGRPMYQRQMSEPNIPFPPQGFKQEYHDPVYEHNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 PMDHRFRRQLSEPCNSFPPLPTMPREGRPMYQRQMSEPNIPFPPQGFKQEYHDPVYEHNT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 MVGSAASQSFPPPLMIKQEPRDFAYDSGCMFEKGPRQFYDDTCVVPEKFDGDIKQEPGMY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MVGSAASQSFPPPLMIKQEPRDFAYDSGCMFEKGPRQFYDDTCVVPEKFDGDIKQEPGMY
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 REGPTYQRRGSLQLWQFLVALLDDPSNSHFIAWTGRGMEFKLIEPEEVARRWGIQKNRPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 REGPTYQRRGSLQLWQFLVALLDDPSNSHFIAWTGRGMEFKLIEPEEVARRWGIQKNRPA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 MNYDKLSRSLRYYYEKGIMQKVAGERYVYKFVCDPEALFSMAFPDNQRPLLKTDMERHIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MNYDKLSRSLRYYYEKGIMQKVAGERYVYKFVCDPEALFSMAFPDNQRPLLKTDMERHIN
370 380 390 400 410 420
430 440 450
pF1KB3 EEDTVPLSHFDESMAYMPEGGCCNPHPYNEGYVY
::::::::::::::::::::::::::::::::::
CCDS55 EEDTVPLSHFDESMAYMPEGGCCNPHPYNEGYVY
430 440 450
>>CCDS55088.1 ETV1 gene_id:2115|Hs108|chr7 (477 aa)
initn: 3234 init1: 1905 opt: 1905 Z-score: 1229.8 bits: 236.9 E(32554): 3.5e-62
Smith-Waterman score: 3192; 95.0% identity (95.2% similar) in 477 aa overlap (1-454:1-477)
10 20 30 40 50 60
pF1KB3 MDGFYDQQVPYMVTNSQRGRNCNEKPTNVRKRKFINRDLAHDSEELFQDLSQLQETWLAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MDGFYDQQVPYMVTNSQRGRNCNEKPTNVRKRKFINRDLAHDSEELFQDLSQLQETWLAE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 AQVPDNDEQFVPDYQAESLAFHGLPLKIKKEPHSPCSEIGSACSQEQPFKFSYGEKCLYN
:::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::
CCDS55 AQVPDNDEQFVPDYQAESLAFHGLPLKIKKEPHSPCSEISSACSQEQPFKFSYGEKCLYN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 VSAYDQKPQVGMRPSNPPTPSSTPVSPLHHASPNSTHTPKPDRAFPAHLPPSQSIPDSSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 VSAYDQKPQVGMRPSNPPTPSSTPVSPLHHASPNSTHTPKPDRAFPAHLPPSQSIPDSSY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 PMDHRFRRQLSEPCNSFPPLPTMPREGRPMYQRQMSEPNIPFPPQGFKQEYHDPVYEHNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 PMDHRFRRQLSEPCNSFPPLPTMPREGRPMYQRQMSEPNIPFPPQGFKQEYHDPVYEHNT
190 200 210 220 230 240
250 260 270
pF1KB3 MVGSAASQSFPPPLMIKQEPRDFAYDS-----------------------GCMFEKGPRQ
::::::::::::::::::::::::::: ::::::::::
CCDS55 MVGSAASQSFPPPLMIKQEPRDFAYDSEVPSCHSIYMRQEGFLAHPSRTEGCMFEKGPRQ
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB3 FYDDTCVVPEKFDGDIKQEPGMYREGPTYQRRGSLQLWQFLVALLDDPSNSHFIAWTGRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 FYDDTCVVPEKFDGDIKQEPGMYREGPTYQRRGSLQLWQFLVALLDDPSNSHFIAWTGRG
310 320 330 340 350 360
340 350 360 370 380 390
pF1KB3 MEFKLIEPEEVARRWGIQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGERYVYKFVCDPEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MEFKLIEPEEVARRWGIQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGERYVYKFVCDPEA
370 380 390 400 410 420
400 410 420 430 440 450
pF1KB3 LFSMAFPDNQRPLLKTDMERHINEEDTVPLSHFDESMAYMPEGGCCNPHPYNEGYVY
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LFSMAFPDNQRPLLKTDMERHINEEDTVPLSHFDESMAYMPEGGCCNPHPYNEGYVY
430 440 450 460 470
>>CCDS55085.1 ETV1 gene_id:2115|Hs108|chr7 (437 aa)
initn: 2821 init1: 1492 opt: 1492 Z-score: 968.0 bits: 188.3 E(32554): 1.3e-47
Smith-Waterman score: 2779; 94.2% identity (94.5% similar) in 417 aa overlap (61-454:21-437)
40 50 60 70 80 90
pF1KB3 KRKFINRDLAHDSEELFQDLSQLQETWLAEAQVPDNDEQFVPDYQAESLAFHGLPLKIKK
::::::::::::::::::::::::::::::
CCDS55 MLQDLSASVFFPPCSQHRTLAQVPDNDEQFVPDYQAESLAFHGLPLKIKK
10 20 30 40 50
100 110 120 130 140 150
pF1KB3 EPHSPCSEIGSACSQEQPFKFSYGEKCLYNVSAYDQKPQVGMRPSNPPTPSSTPVSPLHH
:::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 EPHSPCSEISSACSQEQPFKFSYGEKCLYNVSAYDQKPQVGMRPSNPPTPSSTPVSPLHH
60 70 80 90 100 110
160 170 180 190 200 210
pF1KB3 ASPNSTHTPKPDRAFPAHLPPSQSIPDSSYPMDHRFRRQLSEPCNSFPPLPTMPREGRPM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 ASPNSTHTPKPDRAFPAHLPPSQSIPDSSYPMDHRFRRQLSEPCNSFPPLPTMPREGRPM
120 130 140 150 160 170
220 230 240 250 260
pF1KB3 YQRQMSEPNIPFPPQGFKQEYHDPVYEHNTMVGSAASQSFPPPLMIKQEPRDFAYDS---
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 YQRQMSEPNIPFPPQGFKQEYHDPVYEHNTMVGSAASQSFPPPLMIKQEPRDFAYDSEVP
180 190 200 210 220 230
270 280 290 300
pF1KB3 --------------------GCMFEKGPRQFYDDTCVVPEKFDGDIKQEPGMYREGPTYQ
::::::::::::::::::::::::::::::::::::::::
CCDS55 SCHSIYMRQEGFLAHPSRTEGCMFEKGPRQFYDDTCVVPEKFDGDIKQEPGMYREGPTYQ
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB3 RRGSLQLWQFLVALLDDPSNSHFIAWTGRGMEFKLIEPEEVARRWGIQKNRPAMNYDKLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 RRGSLQLWQFLVALLDDPSNSHFIAWTGRGMEFKLIEPEEVARRWGIQKNRPAMNYDKLS
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB3 RSLRYYYEKGIMQKVAGERYVYKFVCDPEALFSMAFPDNQRPLLKTDMERHINEEDTVPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 RSLRYYYEKGIMQKVAGERYVYKFVCDPEALFSMAFPDNQRPLLKTDMERHINEEDTVPL
360 370 380 390 400 410
430 440 450
pF1KB3 SHFDESMAYMPEGGCCNPHPYNEGYVY
:::::::::::::::::::::::::::
CCDS55 SHFDESMAYMPEGGCCNPHPYNEGYVY
420 430
>>CCDS55084.1 ETV1 gene_id:2115|Hs108|chr7 (374 aa)
initn: 2348 init1: 1343 opt: 1443 Z-score: 937.9 bits: 182.5 E(32554): 6.4e-46
Smith-Waterman score: 2184; 79.1% identity (79.4% similar) in 417 aa overlap (61-454:21-374)
40 50 60 70 80 90
pF1KB3 KRKFINRDLAHDSEELFQDLSQLQETWLAEAQVPDNDEQFVPDYQAESLAFHGLPLKIKK
::::::::::::::::::::::::::::::
CCDS55 MLQDLSASVFFPPCSQHRTLAQVPDNDEQFVPDYQAESLAFHGLPLKIKK
10 20 30 40 50
100 110 120 130 140 150
pF1KB3 EPHSPCSEIGSACSQEQPFKFSYGEKCLYNVSAYDQKPQVGMRPSNPPTPSSTPVSPLHH
:::::::::.:::::::::::::::::::::
CCDS55 EPHSPCSEISSACSQEQPFKFSYGEKCLYNV-----------------------------
60 70 80
160 170 180 190 200 210
pF1KB3 ASPNSTHTPKPDRAFPAHLPPSQSIPDSSYPMDHRFRRQLSEPCNSFPPLPTMPREGRPM
::::::::::::::::::::::::::
CCDS55 ----------------------------------RFRRQLSEPCNSFPPLPTMPREGRPM
90 100
220 230 240 250 260
pF1KB3 YQRQMSEPNIPFPPQGFKQEYHDPVYEHNTMVGSAASQSFPPPLMIKQEPRDFAYDS---
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 YQRQMSEPNIPFPPQGFKQEYHDPVYEHNTMVGSAASQSFPPPLMIKQEPRDFAYDSEVP
110 120 130 140 150 160
270 280 290 300
pF1KB3 --------------------GCMFEKGPRQFYDDTCVVPEKFDGDIKQEPGMYREGPTYQ
::::::::::::::::::::::::::::::::::::::::
CCDS55 SCHSIYMRQEGFLAHPSRTEGCMFEKGPRQFYDDTCVVPEKFDGDIKQEPGMYREGPTYQ
170 180 190 200 210 220
310 320 330 340 350 360
pF1KB3 RRGSLQLWQFLVALLDDPSNSHFIAWTGRGMEFKLIEPEEVARRWGIQKNRPAMNYDKLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 RRGSLQLWQFLVALLDDPSNSHFIAWTGRGMEFKLIEPEEVARRWGIQKNRPAMNYDKLS
230 240 250 260 270 280
370 380 390 400 410 420
pF1KB3 RSLRYYYEKGIMQKVAGERYVYKFVCDPEALFSMAFPDNQRPLLKTDMERHINEEDTVPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 RSLRYYYEKGIMQKVAGERYVYKFVCDPEALFSMAFPDNQRPLLKTDMERHINEEDTVPL
290 300 310 320 330 340
430 440 450
pF1KB3 SHFDESMAYMPEGGCCNPHPYNEGYVY
:::::::::::::::::::::::::::
CCDS55 SHFDESMAYMPEGGCCNPHPYNEGYVY
350 360 370
>>CCDS55083.1 ETV1 gene_id:2115|Hs108|chr7 (419 aa)
initn: 2692 init1: 1363 opt: 1371 Z-score: 891.4 bits: 174.1 E(32554): 2.5e-43
Smith-Waterman score: 2658; 92.4% identity (93.2% similar) in 409 aa overlap (70-454:11-419)
40 50 60 70 80 90
pF1KB3 AHDSEELFQDLSQLQETWLAEAQVPDNDEQFVPDYQAESL-AFHGLPLKIKKEPHSPCSE
: : : ..: :::::::::::::::::::
CCDS55 MLQDLSASVFFPPCSQHRTLVAFHGLPLKIKKEPHSPCSE
10 20 30 40
100 110 120 130 140 150
pF1KB3 IGSACSQEQPFKFSYGEKCLYNVSAYDQKPQVGMRPSNPPTPSSTPVSPLHHASPNSTHT
:.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 ISSACSQEQPFKFSYGEKCLYNVSAYDQKPQVGMRPSNPPTPSSTPVSPLHHASPNSTHT
50 60 70 80 90 100
160 170 180 190 200 210
pF1KB3 PKPDRAFPAHLPPSQSIPDSSYPMDHRFRRQLSEPCNSFPPLPTMPREGRPMYQRQMSEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 PKPDRAFPAHLPPSQSIPDSSYPMDHRFRRQLSEPCNSFPPLPTMPREGRPMYQRQMSEP
110 120 130 140 150 160
220 230 240 250 260
pF1KB3 NIPFPPQGFKQEYHDPVYEHNTMVGSAASQSFPPPLMIKQEPRDFAYDS-----------
:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 NIPFPPQGFKQEYHDPVYEHNTMVGSAASQSFPPPLMIKQEPRDFAYDSEVPSCHSIYMR
170 180 190 200 210 220
270 280 290 300 310
pF1KB3 ------------GCMFEKGPRQFYDDTCVVPEKFDGDIKQEPGMYREGPTYQRRGSLQLW
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 QEGFLAHPSRTEGCMFEKGPRQFYDDTCVVPEKFDGDIKQEPGMYREGPTYQRRGSLQLW
230 240 250 260 270 280
320 330 340 350 360 370
pF1KB3 QFLVALLDDPSNSHFIAWTGRGMEFKLIEPEEVARRWGIQKNRPAMNYDKLSRSLRYYYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 QFLVALLDDPSNSHFIAWTGRGMEFKLIEPEEVARRWGIQKNRPAMNYDKLSRSLRYYYE
290 300 310 320 330 340
380 390 400 410 420 430
pF1KB3 KGIMQKVAGERYVYKFVCDPEALFSMAFPDNQRPLLKTDMERHINEEDTVPLSHFDESMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KGIMQKVAGERYVYKFVCDPEALFSMAFPDNQRPLLKTDMERHINEEDTVPLSHFDESMA
350 360 370 380 390 400
440 450
pF1KB3 YMPEGGCCNPHPYNEGYVY
:::::::::::::::::::
CCDS55 YMPEGGCCNPHPYNEGYVY
410
>>CCDS55086.1 ETV1 gene_id:2115|Hs108|chr7 (459 aa)
initn: 3091 init1: 1363 opt: 1365 Z-score: 887.0 bits: 173.4 E(32554): 4.4e-43
Smith-Waterman score: 3017; 91.0% identity (91.4% similar) in 477 aa overlap (1-454:1-459)
10 20 30 40 50 60
pF1KB3 MDGFYDQQVPYMVTNSQRGRNCNEKPTNVRKRKFINRDLAHDSEELFQDLSQLQETWLAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MDGFYDQQVPYMVTNSQRGRNCNEKPTNVRKRKFINRDLAHDSEELFQDLSQLQETWLAE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 AQVPDNDEQFVPDYQAESLAFHGLPLKIKKEPHSPCSEIGSACSQEQPFKFSYGEKCLYN
.::::::::::::::::::::.::::::::::::::::::::
CCDS55 ------------------VAFHGLPLKIKKEPHSPCSEISSACSQEQPFKFSYGEKCLYN
70 80 90 100
130 140 150 160 170 180
pF1KB3 VSAYDQKPQVGMRPSNPPTPSSTPVSPLHHASPNSTHTPKPDRAFPAHLPPSQSIPDSSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 VSAYDQKPQVGMRPSNPPTPSSTPVSPLHHASPNSTHTPKPDRAFPAHLPPSQSIPDSSY
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB3 PMDHRFRRQLSEPCNSFPPLPTMPREGRPMYQRQMSEPNIPFPPQGFKQEYHDPVYEHNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 PMDHRFRRQLSEPCNSFPPLPTMPREGRPMYQRQMSEPNIPFPPQGFKQEYHDPVYEHNT
170 180 190 200 210 220
250 260 270
pF1KB3 MVGSAASQSFPPPLMIKQEPRDFAYDS-----------------------GCMFEKGPRQ
::::::::::::::::::::::::::: ::::::::::
CCDS55 MVGSAASQSFPPPLMIKQEPRDFAYDSEVPSCHSIYMRQEGFLAHPSRTEGCMFEKGPRQ
230 240 250 260 270 280
280 290 300 310 320 330
pF1KB3 FYDDTCVVPEKFDGDIKQEPGMYREGPTYQRRGSLQLWQFLVALLDDPSNSHFIAWTGRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 FYDDTCVVPEKFDGDIKQEPGMYREGPTYQRRGSLQLWQFLVALLDDPSNSHFIAWTGRG
290 300 310 320 330 340
340 350 360 370 380 390
pF1KB3 MEFKLIEPEEVARRWGIQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGERYVYKFVCDPEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MEFKLIEPEEVARRWGIQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGERYVYKFVCDPEA
350 360 370 380 390 400
400 410 420 430 440 450
pF1KB3 LFSMAFPDNQRPLLKTDMERHINEEDTVPLSHFDESMAYMPEGGCCNPHPYNEGYVY
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LFSMAFPDNQRPLLKTDMERHINEEDTVPLSHFDESMAYMPEGGCCNPHPYNEGYVY
410 420 430 440 450
>>CCDS33906.1 ETV5 gene_id:2119|Hs108|chr3 (510 aa)
initn: 1740 init1: 1045 opt: 1139 Z-score: 742.8 bits: 146.8 E(32554): 4.7e-35
Smith-Waterman score: 1894; 59.3% identity (74.4% similar) in 492 aa overlap (25-454:25-510)
10 20 30 40 50 60
pF1KB3 MDGFYDQQVPYMVTNSQRGRNCNEKPTNVRKRKFINRDLAHDSEELFQDLSQLQETWLAE
.:. :::::.. ::::::::::::::::::.::::
CCDS33 MDGFYDQQVPFMVPGKSRSEECRGRPVIDRKRKFLDTDLAHDSEELFQDLSQLQEAWLAE
10 20 30 40 50 60
70 80 90 100 110
pF1KB3 AQVPDNDEQFVPDYQAESLAFHGLP-LKIKKEPHSPCSEIGSACSQEQPFKFSYGEKCLY
::::: :::::::.:...:..:. : :::.: ::: ::. :.::.:: . .:::::::
CCDS33 AQVPD-DEQFVPDFQSDNLVLHAPPPTKIKRELHSPSSEL-SSCSHEQALGANYGEKCLY
70 80 90 100 110
120 130 140 150
pF1KB3 NVSAYDQKPQVGMRPSNPPTPSSTPVSPLH----------------HA------------
: :::.:: :..: .::: ::.:: : ::
CCDS33 NYCAYDRKPPSGFKPLTPPT---TPLSPTHQNPLFPPPQATLPTSGHAPAAGPVQGVGPA
120 130 140 150 160 170
160 170 180 190 200
pF1KB3 -SPNSTHTPKPDR-AFPAHLPPSQSI------PDSSYPMDHRFRRQLSEPCNSFPPLPTM
.:.: : :.. .: . :: : . :...:: ..::.:::::::. ::: : .
CCDS33 PAPHSLPEPGPQQQTFAVPRPPHQPLQMPKMMPENQYPSEQRFQRQLSEPCHPFPPQPGV
180 190 200 210 220 230
210 220 230 240 250
pF1KB3 PREGRPMYQRQMSEPNIPF---PPQGFKQEYHDPVYEHNT--MVGSAASQSFPPPLMIKQ
: ..:: :.:::::: .: ::::::::::::.:::.. : : : ..: :. :::
CCDS33 PGDNRPSYHRQMSEPIVPAAPPPPQGFKQEYHDPLYEHGVPGMPGPPA-HGFQSPMGIKQ
240 250 260 270 280 290
260 270 280 290
pF1KB3 EPRDFAYDS--------------------GCMFEKGPRQFYDDTCVVPEKFDGDIKQEPG
::::. :: : .:: :: ..::::::::...: .::::
CCDS33 EPRDYCVDSEVPNCQSSYMRGGYFSSSHEGFSYEKDPRLYFDDTCVVPERLEGKVKQEPT
300 310 320 330 340 350
300 310 320 330 340 350
pF1KB3 MYREGPTYQRRGSLQLWQFLVALLDDPSNSHFIAWTGRGMEFKLIEPEEVARRWGIQKNR
:::::: ::::::::::::::.:::::.:.::::::::::::::::::::::::::::::
CCDS33 MYREGPPYQRRGSLQLWQFLVTLLDDPANAHFIAWTGRGMEFKLIEPEEVARRWGIQKNR
360 370 380 390 400 410
360 370 380 390 400 410
pF1KB3 PAMNYDKLSRSLRYYYEKGIMQKVAGERYVYKFVCDPEALFSMAFPDNQRPLLKTDMERH
:::::::::::::::::::::::::::::::::::::.:::::::::::::.::.. : :
CCDS33 PAMNYDKLSRSLRYYYEKGIMQKVAGERYVYKFVCDPDALFSMAFPDNQRPFLKAESECH
420 430 440 450 460 470
420 430 440 450
pF1KB3 INEEDTVPLSHFDESMAYMPEGGCCNPHPYNEGYVY
..::::.::.::..: ::. . :. :: ::..:
CCDS33 LSEEDTLPLTHFEDSPAYLLDMDRCSSLPYAEGFAY
480 490 500 510
>>CCDS58553.1 ETV4 gene_id:2118|Hs108|chr17 (445 aa)
initn: 1517 init1: 868 opt: 1084 Z-score: 708.7 bits: 140.3 E(32554): 3.7e-33
Smith-Waterman score: 1554; 56.0% identity (72.8% similar) in 448 aa overlap (42-454:10-445)
20 30 40 50 60 70
pF1KB3 MVTNSQRGRNCNEKPTNVRKRKFINRDLAHDSEELFQDLSQLQETWLAEAQVPDNDEQFV
:::.::::::..::::::::::::.:::::
CCDS58 MDPGSLPPLDSEDLFQDLSHFQETWLAEAQVPDSDEQFV
10 20 30
80 90 100 110 120 130
pF1KB3 PDYQAESLAFHGLPLKIKKEPHSPCSEIGSACSQEQPFKFSYGEKCLYNVSAYDQKPQVG
::...:.::::. .:::::.:: .. . .::.. :. . .::.:::. :::: :..
CCDS58 PDFHSENLAFHSPTTRIKKEPQSPRTDPALSCSRKPPLPYHHGEQCLYS-SAYDPPRQIA
40 50 60 70 80 90
140 150 160 170 180
pF1KB3 MRPSNPPTPSSTPVSPLHHASPNSTHTPKPDRAFPAHLPPSQSIPDSSYPMDHR--FRRQ
.. : . ...:..:. .: .: : :: : .: .: :..
CCDS58 IKSPAPGALGQSPLQPFPRAE---------QRNFLRSSGTSQPHPGHGYLGEHSSVFQQP
100 110 120 130 140
190 200 210 220 230 240
pF1KB3 LSEPCNSFPPLPTMPREGRPM-YQRQMSEPNIPFPPQGFKQEYHDPVYEHNTMV----GS
: . :.:: :: : ::.:.::: :.: :.::::::::.::. . :.
CCDS58 L-DICHSFTS-QGGGREPLPAPYQHQLSEPCPPYPQQSFKQEYHDPLYEQAGQPAVDQGG
150 160 170 180 190 200
250 260 270
pF1KB3 AASQSFPPP-LMIKQEPRDFAYDS---GCM----------------------FEKGPRQF
. .. .: ..:::: :::::: :: .:: : :
CCDS58 VNGHRYPGAGVVIKQEQTDFAYDSDVTGCASMYLHTEGFSGPSPGDGAMGYGYEKPLRPF
210 220 230 240 250 260
280 290 300 310 320 330
pF1KB3 YDDTCVVPEKFDGDIKQEP-GMYREGPTYQRRGSLQLWQFLVALLDDPSNSHFIAWTGRG
::.:::::::.:::::: : .:::: :::::.::::::::::::::.:.:::::::::
CCDS58 PDDVCVVPEKFEGDIKQEGVGAFREGPPYQRRGALQLWQFLVALLDDPTNAHFIAWTGRG
270 280 290 300 310 320
340 350 360 370 380 390
pF1KB3 MEFKLIEPEEVARRWGIQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGERYVYKFVCDPEA
::::::::::::: ::::::::::::::::::::::::::::::::::::::::::.:::
CCDS58 MEFKLIEPEEVARLWGIQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGERYVYKFVCEPEA
330 340 350 360 370 380
400 410 420 430 440 450
pF1KB3 LFSMAFPDNQRPLLKTDMERHINEEDTVPLSHFDESMAYMPE-GGCCNPHPYNEGYVY
:::.:::::::: ::....: ..:::::::::.::: ::.:: .: .: . :: :
CCDS58 LFSLAFPDNQRPALKAEFDRPVSEEDTVPLSHLDESPAYLPELAGPAQPFGPKGGYSY
390 400 410 420 430 440
>>CCDS11465.1 ETV4 gene_id:2118|Hs108|chr17 (484 aa)
initn: 1554 init1: 868 opt: 1084 Z-score: 708.2 bits: 140.4 E(32554): 4e-33
Smith-Waterman score: 1579; 53.2% identity (70.8% similar) in 489 aa overlap (3-454:8-484)
10 20 30 40 50
pF1KB3 MDGFYDQQVPYMVTNSQRGRNCNEKPTNVRKRKFINRDLAH--DSEELFQDLSQL
:. :::::: .... : . .. :... :::.::::::..
CCDS11 MERRMKAGYLDQQVPYTFSSKSPGNGSLREALIGPLGKLMDPGSLPPLDSEDLFQDLSHF
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB3 QETWLAEAQVPDNDEQFVPDYQAESLAFHGLPLKIKKEPHSPCSEIGSACSQEQPFKFSY
::::::::::::.:::::::...:.::::. .:::::.:: .. . .::.. :. . .
CCDS11 QETWLAEAQVPDSDEQFVPDFHSENLAFHSPTTRIKKEPQSPRTDPALSCSRKPPLPYHH
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB3 GEKCLYNVSAYDQKPQVGMRPSNPPTPSSTPVSPLHHASPNSTHTPKPDRAFPAHLPPSQ
::.:::. :::: :.... : . ...:..:. .: .: : ::
CCDS11 GEQCLYS-SAYDPPRQIAIKSPAPGALGQSPLQPFPRAE---------QRNFLRSSGTSQ
130 140 150 160 170
180 190 200 210 220 230
pF1KB3 SIPDSSYPMDHR--FRRQLSEPCNSFPPLPTMPREGRPM-YQRQMSEPNIPFPPQGFKQE
: .: .: :.. : . :.:: :: : ::.:.::: :.: :.::::
CCDS11 PHPGHGYLGEHSSVFQQPL-DICHSFTSQGG-GREPLPAPYQHQLSEPCPPYPQQSFKQE
180 190 200 210 220
240 250 260 270
pF1KB3 YHDPVYEHNTMV----GSAASQSFPPP-LMIKQEPRDFAYDS---GCM------------
::::.::. . :.. .. .: ..:::: :::::: ::
CCDS11 YHDPLYEQAGQPAVDQGGVNGHRYPGAGVVIKQEQTDFAYDSDVTGCASMYLHTEGFSGP
230 240 250 260 270 280
280 290 300 310
pF1KB3 ----------FEKGPRQFYDDTCVVPEKFDGDIKQEP-GMYREGPTYQRRGSLQLWQFLV
.:: : : ::.:::::::.:::::: : .:::: :::::.::::::::
CCDS11 SPGDGAMGYGYEKPLRPFPDDVCVVPEKFEGDIKQEGVGAFREGPPYQRRGALQLWQFLV
290 300 310 320 330 340
320 330 340 350 360 370
pF1KB3 ALLDDPSNSHFIAWTGRGMEFKLIEPEEVARRWGIQKNRPAMNYDKLSRSLRYYYEKGIM
::::::.:.:::::::::::::::::::::: ::::::::::::::::::::::::::::
CCDS11 ALLDDPTNAHFIAWTGRGMEFKLIEPEEVARLWGIQKNRPAMNYDKLSRSLRYYYEKGIM
350 360 370 380 390 400
380 390 400 410 420 430
pF1KB3 QKVAGERYVYKFVCDPEALFSMAFPDNQRPLLKTDMERHINEEDTVPLSHFDESMAYMPE
::::::::::::::.::::::.:::::::: ::....: ..:::::::::.::: ::.::
CCDS11 QKVAGERYVYKFVCEPEALFSLAFPDNQRPALKAEFDRPVSEEDTVPLSHLDESPAYLPE
410 420 430 440 450 460
440 450
pF1KB3 -GGCCNPHPYNEGYVY
.: .: . :: :
CCDS11 LAGPAQPFGPKGGYSY
470 480
>>CCDS59292.1 ETV4 gene_id:2118|Hs108|chr17 (207 aa)
initn: 986 init1: 868 opt: 1007 Z-score: 664.7 bits: 131.1 E(32554): 1.1e-30
Smith-Waterman score: 1007; 76.1% identity (86.8% similar) in 197 aa overlap (260-454:13-207)
230 240 250 260 270 280
pF1KB3 EYHDPVYEHNTMVGSAASQSFPPPLMIKQEPRDFAYDSGCMFEKGPRQFYDDTCVVPEKF
: : :. : .:: : : ::.:::::::
CCDS59 MYLHTEGFSGPSPGDGAMGYG--YEKPLRPFPDDVCVVPEKF
10 20 30 40
290 300 310 320 330 340
pF1KB3 DGDIKQEP-GMYREGPTYQRRGSLQLWQFLVALLDDPSNSHFIAWTGRGMEFKLIEPEEV
.:::::: : .:::: :::::.::::::::::::::.:.::::::::::::::::::::
CCDS59 EGDIKQEGVGAFREGPPYQRRGALQLWQFLVALLDDPTNAHFIAWTGRGMEFKLIEPEEV
50 60 70 80 90 100
350 360 370 380 390 400
pF1KB3 ARRWGIQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGERYVYKFVCDPEALFSMAFPDNQR
:: ::::::::::::::::::::::::::::::::::::::::::.::::::.:::::::
CCDS59 ARLWGIQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGERYVYKFVCEPEALFSLAFPDNQR
110 120 130 140 150 160
410 420 430 440 450
pF1KB3 PLLKTDMERHINEEDTVPLSHFDESMAYMPE-GGCCNPHPYNEGYVY
: ::....: ..:::::::::.::: ::.:: .: .: . :: :
CCDS59 PALKAEFDRPVSEEDTVPLSHLDESPAYLPELAGPAQPFGPKGGYSY
170 180 190 200
454 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 02:45:24 2016 done: Fri Nov 4 02:45:24 2016
Total Scan time: 3.070 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]