Result of FASTA (ccds) for
pF1KB4080
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB4080, 338 aa
1>>>pF1KB4080 338 - 338 aa - 338 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8720+/-0.000913; mu= 12.9423+/- 0.055
mean_var=69.6059+/-14.390, 0's: 0 Z-trim(104.8): 29 B-trim: 0 in 0/48
Lambda= 0.153727
statistics sampled from 8066 (8093) to 8066 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.629), E-opt: 0.2 (0.249), width: 16
Scan time: 2.320
The best scores are: opt bits E(32554)
CCDS8523.2 PARP11 gene_id:57097|Hs108|chr12 ( 338) 2365 533.7 8.1e-152
CCDS66281.1 PARP11 gene_id:57097|Hs108|chr12 ( 257) 1733 393.5 9.9e-110
CCDS5857.1 PARP12 gene_id:64761|Hs108|chr7 ( 701) 496 119.3 9.5e-27
CCDS3177.1 TIPARP gene_id:25976|Hs108|chr3 ( 657) 332 82.9 7.9e-16
CCDS5851.1 ZC3HAV1 gene_id:56829|Hs108|chr7 ( 902) 309 77.9 3.6e-14
CCDS3016.1 PARP15 gene_id:165631|Hs108|chr3 ( 444) 287 72.9 5.6e-13
CCDS77804.1 PARP15 gene_id:165631|Hs108|chr3 ( 375) 285 72.4 6.6e-13
CCDS46893.1 PARP15 gene_id:165631|Hs108|chr3 ( 678) 287 72.9 8.2e-13
CCDS77803.1 PARP15 gene_id:165631|Hs108|chr3 ( 483) 285 72.4 8.3e-13
CCDS46894.1 PARP14 gene_id:54625|Hs108|chr3 (1801) 279 71.3 6.8e-12
>>CCDS8523.2 PARP11 gene_id:57097|Hs108|chr12 (338 aa)
initn: 2365 init1: 2365 opt: 2365 Z-score: 2839.1 bits: 533.7 E(32554): 8.1e-152
Smith-Waterman score: 2365; 100.0% identity (100.0% similar) in 338 aa overlap (1-338:1-338)
10 20 30 40 50 60
pF1KB4 MWEANPEMFHKAEELFSKTTNNEVDDMDTSDTQWGWFYLAECGKWHMFQPDTNSQCSVSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS85 MWEANPEMFHKAEELFSKTTNNEVDDMDTSDTQWGWFYLAECGKWHMFQPDTNSQCSVSS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 EDIEKSFKTNPCGSISFTTSKFSYKIDFAEMKQMNLTTGKQRLIKRAPFSISAFSYICEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS85 EDIEKSFKTNPCGSISFTTSKFSYKIDFAEMKQMNLTTGKQRLIKRAPFSISAFSYICEN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 EAIPMPPHWENVNTQVPYQLIPLHNQTHEYNEVANLFGKTMDRNRIKRIQRIQNLDLWEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS85 EAIPMPPHWENVNTQVPYQLIPLHNQTHEYNEVANLFGKTMDRNRIKRIQRIQNLDLWEF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 FCRKKAQLKKKRGVPQINEQMLFHGTSSEFVEAICIHNFDWRINGIHGAVFGKGTYFARD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS85 FCRKKAQLKKKRGVPQINEQMLFHGTSSEFVEAICIHNFDWRINGIHGAVFGKGTYFARD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 AAYSSRFCKDDIKHGNTFQIHGVSLQQRHLFRTYKSMFLARVLIGDYINGDSKYMRPPSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS85 AAYSSRFCKDDIKHGNTFQIHGVSLQQRHLFRTYKSMFLARVLIGDYINGDSKYMRPPSK
250 260 270 280 290 300
310 320 330
pF1KB4 DGSYVNLYDSCVDDTWNPKIFVVFDANQIYPEYLIDFH
::::::::::::::::::::::::::::::::::::::
CCDS85 DGSYVNLYDSCVDDTWNPKIFVVFDANQIYPEYLIDFH
310 320 330
>>CCDS66281.1 PARP11 gene_id:57097|Hs108|chr12 (257 aa)
initn: 1733 init1: 1733 opt: 1733 Z-score: 2083.5 bits: 393.5 E(32554): 9.9e-110
Smith-Waterman score: 1733; 99.6% identity (100.0% similar) in 250 aa overlap (89-338:8-257)
60 70 80 90 100 110
pF1KB4 SSEDIEKSFKTNPCGSISFTTSKFSYKIDFAEMKQMNLTTGKQRLIKRAPFSISAFSYIC
.:::::::::::::::::::::::::::::
CCDS66 MWEVAHVSEMKQMNLTTGKQRLIKRAPFSISAFSYIC
10 20 30
120 130 140 150 160 170
pF1KB4 ENEAIPMPPHWENVNTQVPYQLIPLHNQTHEYNEVANLFGKTMDRNRIKRIQRIQNLDLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 ENEAIPMPPHWENVNTQVPYQLIPLHNQTHEYNEVANLFGKTMDRNRIKRIQRIQNLDLW
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB4 EFFCRKKAQLKKKRGVPQINEQMLFHGTSSEFVEAICIHNFDWRINGIHGAVFGKGTYFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 EFFCRKKAQLKKKRGVPQINEQMLFHGTSSEFVEAICIHNFDWRINGIHGAVFGKGTYFA
100 110 120 130 140 150
240 250 260 270 280 290
pF1KB4 RDAAYSSRFCKDDIKHGNTFQIHGVSLQQRHLFRTYKSMFLARVLIGDYINGDSKYMRPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 RDAAYSSRFCKDDIKHGNTFQIHGVSLQQRHLFRTYKSMFLARVLIGDYINGDSKYMRPP
160 170 180 190 200 210
300 310 320 330
pF1KB4 SKDGSYVNLYDSCVDDTWNPKIFVVFDANQIYPEYLIDFH
::::::::::::::::::::::::::::::::::::::::
CCDS66 SKDGSYVNLYDSCVDDTWNPKIFVVFDANQIYPEYLIDFH
220 230 240 250
>>CCDS5857.1 PARP12 gene_id:64761|Hs108|chr7 (701 aa)
initn: 657 init1: 423 opt: 496 Z-score: 593.7 bits: 119.3 E(32554): 9.5e-27
Smith-Waterman score: 763; 36.5% identity (66.6% similar) in 323 aa overlap (32-337:375-677)
10 20 30 40 50
pF1KB4 WEANPEMFHKAEELFSKTTNNEVDDMDTSDTQWGWFYLAECGKWHMF--QPDTNSQCSVS
:.: :.. : :.:. . : .. .::
CCDS58 NFNAMTYGATQARRLSTASSVTKPPHFILTTDWIWYWSDEFGSWQEYGRQGTVHPVTTVS
350 360 370 380 390 400
60 70 80 90 100 110
pF1KB4 SEDIEKSF-------KTNPCGSISFTTSKFSYKIDFAEMKQMNLTTGKQRLIKRAPFSIS
: :.::.. . . ....: ..: .:..:: . : ::. : . . : : .:
CCDS58 SSDVEKAYLAYCTPGSDGQAATLKFQAGKHNYELDFKAFVQKNLVYGTTKKVCRRPKYVS
410 420 430 440 450 460
120 130 140 150 160
pF1KB4 ---AFSYICENEAIP----MPPHWENVNTQVP-YQLIPLHNQTHEYNEVANLFGKTMDRN
. .. : .: .: .:.. : .: : : ....::..: :::..:.
CCDS58 PQDVTTMQTCNTKFPGPKSIPDYWDSSALPDPGFQKITLSSSSEEYQKVWNLFNRTLPFY
470 480 490 500 510 520
170 180 190 200 210 220
pF1KB4 RIKRIQRIQNLDLWEFFCRKKAQLKKKRGVPQINEQMLFHGTSSEFVEAICIHNFDWRIN
...:.:.::: ::: . .:.:..:. : ..:..::::::. ::.::: .:::::.
CCDS58 FVQKIERVQNLALWEVYQWQKGQMQKQNGGKAVDERQLFHGTSAIFVDAICQQNFDWRVC
530 540 550 560 570 580
230 240 250 260 270 280
pF1KB4 GIHGAVFGKGTYFARDAAYSSRFCKDDIKHGNTFQIHGVSLQQRHLFRTYKSMFLARVLI
:.::. .:::.::::::::: .. :.: : : .:::::::.
CCDS58 GVHGTSYGKGSYFARDAAYSHHYSKSDT------QTH--------------TMFLARVLV
590 600 610 620
290 300 310 320 330
pF1KB4 GDYINGDSKYMRPPSKDGSYVNLYDSCVDDTWNPKIFVVFDANQIYPEYLIDFH
:... :.....:::.:.: .:::::... .:.:::.:. .:.::::.:..
CCDS58 GEFVRGNASFVRPPAKEGWSNAFYDSCVNSVSDPSIFVIFEKHQVYPEYVIQYTTSSKPS
630 640 650 660 670 680
CCDS58 VTPSILLALGSLFSSRQ
690 700
>>CCDS3177.1 TIPARP gene_id:25976|Hs108|chr3 (657 aa)
initn: 508 init1: 219 opt: 332 Z-score: 397.6 bits: 82.9 E(32554): 7.9e-16
Smith-Waterman score: 484; 38.5% identity (60.7% similar) in 244 aa overlap (106-337:424-648)
80 90 100 110 120
pF1KB4 SFTTSKFSYKIDFAEMKQMNLTTGKQRLIKRAPFSISAFS---YICEN---EAIPMPPHW
.:: . : : :: . : .: :
CCDS31 FFRREIKRRPLFRSCFILLPYLQTLGGVPTQAPPPLEATSSSQIICPDGVTSANFYPETW
400 410 420 430 440 450
130 140 150 160 170 180
pF1KB4 ENVNTQVPYQLIPLHNQTHEYNEVANLFGKTMD--RNRIKRIQRIQNLDLWEFFCRKKAQ
.. . . .:. . . : . ::: ::. . :: .: :.:: ::: . :::
CCDS31 VYMHPSQDFIQVPVSAEDKSYRIIYNLFHKTVPEFKYRILQILRVQNQFLWEKYKRKKEY
460 470 480 490 500 510
190 200 210 220 230 240
pF1KB4 LKKKR-GVPQI-NEQMLFHGTSSEFVEAICIHNFDWRINGIHGAVFGKGTYFARDAAYSS
...: : .: ::. ::::::.. :..:: :::: :. : :...::.:.:::. :.::
CCDS31 MNRKMFGRDRIINERHLFHGTSQDVVDGICKHNFDPRVCGKHATMFGQGSYFAKKASYSH
520 530 540 550 560 570
250 260 270 280 290 300
pF1KB4 RFCKDDIKHGNTFQIHGVSLQQRHLFRTYKSMFLARVLIGDYINGDSKYMRPPSKD-GSY
: : . : :: :. ::::.:: : : :. . ::: . ::
CCDS31 NFSKKSSK--------GV-----HF------MFLAKVLTGRYTMGSHGMRRPPPVNPGSV
580 590 600 610
310 320 330
pF1KB4 V-NLYDSCVDDTWNPKIFVVFDANQIYPEYLIDFH
. .:::::::. ..:.:::.:. .: :: ..:..
CCDS31 TSDLYDSCVDNFFEPQIFVIFNDDQSYPYFVIQYEEVSNTVSI
620 630 640 650
>>CCDS5851.1 ZC3HAV1 gene_id:56829|Hs108|chr7 (902 aa)
initn: 384 init1: 173 opt: 309 Z-score: 367.8 bits: 77.9 E(32554): 3.6e-14
Smith-Waterman score: 498; 29.6% identity (56.8% similar) in 324 aa overlap (32-337:605-893)
10 20 30 40 50
pF1KB4 WEANPEMFHKAEELFSKTTNNEVDDMDTSDTQWGWFYLAECGKWHMF--QPDTNSQCSVS
:.: :.. : : : .. . : .. .:.
CCDS58 NFRVMSCDSFPIRRLSTPSSVTKPANSVFTTKWIWYWKNESGTWIQYGEEKDKRKNSNVD
580 590 600 610 620 630
60 70 80 90 100 110
pF1KB4 SEDIEKSFKTNPCGSISFTTSKFSYKIDFAEMKQMNLTTGKQRLIKRAPFSISAFSYICE
: .:. ... : : . : ... .:...: : : :... :. . : : . . :. .
CCDS58 SSYLESLYQSCPRGVVPFQAGSRNYELSFQGMIQTNIASKTQKDVIRRPTFVPQW-YVQQ
640 650 660 670 680 690
120 130 140 150 160
pF1KB4 NEAIP--MPPHWENVNTQV---P-----------YQLIPLHNQTHEYNEVANLFGKTMDR
. : .: . .:. . : :.: .:. :: .:.. : .:
CCDS58 MKRGPDHQPAKTSSVSLTATFRPQEDFCFLSSKKYKLSEIHHLHPEYVRVSEHFKASMKN
700 710 720 730 740 750
170 180 190 200 210 220
pF1KB4 NRIKRIQRIQNLDLWEFFCRKKAQLKKKRGVPQINEQMLFHGTSSEFVEAICIHNFDWRI
.:..:..:.: .: . : ::.:.:.. : ..::..:: .::.:: .::: .
CCDS58 FKIEKIKKIENSELLDKFTWKKSQMKEE-G------KLLFYATSRAYVESICSNNFDSFL
760 770 780 790 800
230 240 250 260 270 280
pF1KB4 NGIHGAVFGKGTYFARDAAYSSRFCKDDIKHGNTFQIHGVSLQQRHLFRTYKSMFLARVL
. : .::: :::.:: :: . : : : :. ::.:.::
CCDS58 HETHENKYGKGIYFAKDAIYSHKNCPYDAK--NVV------------------MFVAQVL
810 820 830 840
290 300 310 320 330
pF1KB4 IGDYINGDSKYMRPPSKDGSYVNLYDSCVDDTWNPKIFVVFDANQIYPEYLIDFH
.: . .:. : :: . .::::: ::..::.:. .:.::.:.:..
CCDS58 VGKFTEGNITYTSPPPQ-------FDSCVDTRSNPSVFVIFQKDQVYPQYVIEYTEDKAC
850 860 870 880 890
CCDS58 VIS
900
>>CCDS3016.1 PARP15 gene_id:165631|Hs108|chr3 (444 aa)
initn: 448 init1: 151 opt: 287 Z-score: 346.4 bits: 72.9 E(32554): 5.6e-13
Smith-Waterman score: 424; 35.7% identity (61.7% similar) in 227 aa overlap (112-337:239-442)
90 100 110 120 130 140
pF1KB4 FSYKIDFAEMKQMNLTTGKQRLIKRAPFSISAFSYICENEAIPMPPHWENVNTQVPYQLI
:.::. : .: :: ..: :. . ..
CCDS30 VKVVIFQPELLNIFYDSMKKRDLSASLNFQSTFSMTTCN----LPEHWTDMNHQL-FCMV
210 220 230 240 250 260
150 160 170 180 190 200
pF1KB4 PLHNQTHEYNEVANLFGKTMDRNRIKRIQRIQNLDLWEFFCRKKAQLKKKRGVPQINEQM
:. ::: . . : .: . :..:.:::: ::. . :: :. : . ::..
CCDS30 QLEPGQSEYNTIKDKFTRTCSSYAIEKIERIQNAFLWQSYQVKKRQMDIKND-HKNNERL
270 280 290 300 310 320
210 220 230 240 250 260
pF1KB4 LFHGTSSEFVEAICIHNFDWRINGIHGAVFGKGTYFARDAAYSSRFCKDDIKHGNTFQIH
:::::... : . :.:. : ... .::::::: ::.::. :: .. .. .
CCDS30 LFHGTDADSVPYVNQHGFNRSCAGKNAVSYGKGTYFAVDASYSA---KDTYSKPDS---N
330 340 350 360 370
270 280 290 300 310 320
pF1KB4 GVSLQQRHLFRTYKSMFLARVLIGDYINGDSKYMRPPSKDG-SYVNLYDSCVDDTWNPKI
: ..: :...::: : . .: . . :: :. . ..:.:: ...: .::.
CCDS30 G----RKH-------MYVVRVLTGVFTKGRAGLVTPPPKNPHNPTDLFDSVTNNTRSPKL
380 390 400 410 420
330
pF1KB4 FVVFDANQIYPEYLIDFH
:::: :: :::::: :
CCDS30 FVVFFDNQAYPEYLITFTA
430 440
>>CCDS77804.1 PARP15 gene_id:165631|Hs108|chr3 (375 aa)
initn: 410 init1: 151 opt: 285 Z-score: 345.2 bits: 72.4 E(32554): 6.6e-13
Smith-Waterman score: 431; 31.2% identity (59.6% similar) in 285 aa overlap (54-337:115-373)
30 40 50 60 70 80
pF1KB4 VDDMDTSDTQWGWFYLAECGKWHMFQPDTNSQCSVSSEDIEKSFKTNPCGSISFTTSKFS
:.:.: . . ...: .: : .. :.
CCDS77 DVIVNSTARTFNRKSGVSRAILEGAGQAVESECAVLAAQPHRDFIITPGGCLK---CKII
90 100 110 120 130 140
90 100 110 120 130 140
pF1KB4 YKIDFAEMKQMNLTTGKQRLIKRAPFSISAFSYICENEAIPMPPHWENVNTQVPYQLIPL
.. .. . ..:. .. .: :.: . : .: :: ..: :. . .. :
CCDS77 IHVPGGKDVRKTVTSVLEECEQRKYTSVSLPAIGTGN----LPEHWTDMNHQL-FCMVQL
150 160 170 180 190
150 160 170 180 190 200
pF1KB4 HNQTHEYNEVANLFGKTMDRNRIKRIQRIQNLDLWEFFCRKKAQLKKKRGVPQINEQMLF
. ::: . . : .: . :..:.:::: ::. . :: :. : . ::..::
CCDS77 EPGQSEYNTIKDKFTRTCSSYAIEKIERIQNAFLWQSYQVKKRQMDIKND-HKNNERLLF
200 210 220 230 240 250
210 220 230 240 250 260
pF1KB4 HGTSSEFVEAICIHNFDWRINGIHGAVFGKGTYFARDAAYSSRFCKDDIKHGNTFQIHGV
:::... : . :.:. : ... .::::::: ::.::. :: .. .. .:
CCDS77 HGTDADSVPYVNQHGFNRSCAGKNAVSYGKGTYFAVDASYSA---KDTYSKPDS---NG-
260 270 280 290 300
270 280 290 300 310 320
pF1KB4 SLQQRHLFRTYKSMFLARVLIGDYINGDSKYMRPPSKDG-SYVNLYDSCVDDTWNPKIFV
..: :...::: : . .: . . :: :. . ..:.:: ...: .::.::
CCDS77 ---RKH-------MYVVRVLTGVFTKGRAGLVTPPPKNPHNPTDLFDSVTNNTRSPKLFV
310 320 330 340 350
330
pF1KB4 VFDANQIYPEYLIDFH
:: :: :::::: :
CCDS77 VFFDNQAYPEYLITFTA
360 370
>>CCDS46893.1 PARP15 gene_id:165631|Hs108|chr3 (678 aa)
initn: 448 init1: 151 opt: 287 Z-score: 343.5 bits: 72.9 E(32554): 8.2e-13
Smith-Waterman score: 424; 35.7% identity (61.7% similar) in 227 aa overlap (112-337:473-676)
90 100 110 120 130 140
pF1KB4 FSYKIDFAEMKQMNLTTGKQRLIKRAPFSISAFSYICENEAIPMPPHWENVNTQVPYQLI
:.::. : .: :: ..: :. . ..
CCDS46 VKVVIFQPELLNIFYDSMKKRDLSASLNFQSTFSMTTCN----LPEHWTDMNHQL-FCMV
450 460 470 480 490
150 160 170 180 190 200
pF1KB4 PLHNQTHEYNEVANLFGKTMDRNRIKRIQRIQNLDLWEFFCRKKAQLKKKRGVPQINEQM
:. ::: . . : .: . :..:.:::: ::. . :: :. : . ::..
CCDS46 QLEPGQSEYNTIKDKFTRTCSSYAIEKIERIQNAFLWQSYQVKKRQMDIKND-HKNNERL
500 510 520 530 540 550
210 220 230 240 250 260
pF1KB4 LFHGTSSEFVEAICIHNFDWRINGIHGAVFGKGTYFARDAAYSSRFCKDDIKHGNTFQIH
:::::... : . :.:. : ... .::::::: ::.::. :: .. .. .
CCDS46 LFHGTDADSVPYVNQHGFNRSCAGKNAVSYGKGTYFAVDASYSA---KDTYSKPDS---N
560 570 580 590 600 610
270 280 290 300 310 320
pF1KB4 GVSLQQRHLFRTYKSMFLARVLIGDYINGDSKYMRPPSKDG-SYVNLYDSCVDDTWNPKI
: ..: :...::: : . .: . . :: :. . ..:.:: ...: .::.
CCDS46 G----RKH-------MYVVRVLTGVFTKGRAGLVTPPPKNPHNPTDLFDSVTNNTRSPKL
620 630 640 650
330
pF1KB4 FVVFDANQIYPEYLIDFH
:::: :: :::::: :
CCDS46 FVVFFDNQAYPEYLITFTA
660 670
>>CCDS77803.1 PARP15 gene_id:165631|Hs108|chr3 (483 aa)
initn: 436 init1: 151 opt: 285 Z-score: 343.4 bits: 72.4 E(32554): 8.3e-13
Smith-Waterman score: 431; 31.2% identity (59.6% similar) in 285 aa overlap (54-337:223-481)
30 40 50 60 70 80
pF1KB4 VDDMDTSDTQWGWFYLAECGKWHMFQPDTNSQCSVSSEDIEKSFKTNPCGSISFTTSKFS
:.:.: . . ...: .: : .. :.
CCDS77 DVIVNSTARTFNRKSGVSRAILEGAGQAVESECAVLAAQPHRDFIITPGGCLK---CKII
200 210 220 230 240
90 100 110 120 130 140
pF1KB4 YKIDFAEMKQMNLTTGKQRLIKRAPFSISAFSYICENEAIPMPPHWENVNTQVPYQLIPL
.. .. . ..:. .. .: :.: . : .: :: ..: :. . .. :
CCDS77 IHVPGGKDVRKTVTSVLEECEQRKYTSVSLPAIGTGN----LPEHWTDMNHQL-FCMVQL
250 260 270 280 290 300
150 160 170 180 190 200
pF1KB4 HNQTHEYNEVANLFGKTMDRNRIKRIQRIQNLDLWEFFCRKKAQLKKKRGVPQINEQMLF
. ::: . . : .: . :..:.:::: ::. . :: :. : . ::..::
CCDS77 EPGQSEYNTIKDKFTRTCSSYAIEKIERIQNAFLWQSYQVKKRQMDIKND-HKNNERLLF
310 320 330 340 350 360
210 220 230 240 250 260
pF1KB4 HGTSSEFVEAICIHNFDWRINGIHGAVFGKGTYFARDAAYSSRFCKDDIKHGNTFQIHGV
:::... : . :.:. : ... .::::::: ::.::. :: .. .. .:
CCDS77 HGTDADSVPYVNQHGFNRSCAGKNAVSYGKGTYFAVDASYSA---KDTYSKPDS---NG-
370 380 390 400 410
270 280 290 300 310 320
pF1KB4 SLQQRHLFRTYKSMFLARVLIGDYINGDSKYMRPPSKDG-SYVNLYDSCVDDTWNPKIFV
..: :...::: : . .: . . :: :. . ..:.:: ...: .::.::
CCDS77 ---RKH-------MYVVRVLTGVFTKGRAGLVTPPPKNPHNPTDLFDSVTNNTRSPKLFV
420 430 440 450 460
330
pF1KB4 VFDANQIYPEYLIDFH
:: :: :::::: :
CCDS77 VFFDNQAYPEYLITFTA
470 480
>>CCDS46894.1 PARP14 gene_id:54625|Hs108|chr3 (1801 aa)
initn: 398 init1: 135 opt: 279 Z-score: 327.0 bits: 71.3 E(32554): 6.8e-12
Smith-Waterman score: 404; 34.7% identity (62.0% similar) in 216 aa overlap (123-337:1603-1799)
100 110 120 130 140 150
pF1KB4 QMNLTTGKQRLIKRAPFSISAFSYICENEAIPMPPHWENVNTQVPYQLIPLHNQTHEYNE
. .: :: ... : . .. : . :::
CCDS46 HRHYTVNLNTYTATDTKGHSLSVQRLTKSKVDIPAHWSDMKQQ-NFCVVELLPSDPEYNT
1580 1590 1600 1610 1620 1630
160 170 180 190 200 210
pF1KB4 VANLFGKTMDRNRIKRIQRIQNLDLWEFFCRKKAQLKKKRGVPQINEQMLFHGTSSEFVE
::. :..: .. ::..:.:::: :::. . :: . : : .::..:::::.. :
CCDS46 VASKFNQTCSHFRIEKIERIQNPDLWNSYQAKKKTMDAKNG-QTMNEKQLFHGTDAGSVP
1640 1650 1660 1670 1680 1690
220 230 240 250 260 270
pF1KB4 AICIHNFDWRINGIHGAVFGKGTYFARDAAYSSRFCKDDIKHGNTFQIHGVSLQQRHLFR
. ..:. : .....::::::: .: ::. ..:.. :
CCDS46 HVNRNGFNRSYAGKNAVAYGKGTYFAVNANYSA---------NDTYS--------RPDAN
1700 1710 1720 1730
280 290 300 310 320 330
pF1KB4 TYKSMFLARVLIGDYINGDSKYMRPPSKDGSY-VNLYDSCVDDTWNPKIFVVFDANQIYP
: .. .::: : : .:. . . ::::. . ..:::. .:.. .:..::.: : ::
CCDS46 GRKHVYYVRVLTGIYTHGNHSLIVPPSKNPQNPTDLYDTVTDNVHHPSLFVAFYDYQAYP
1740 1750 1760 1770 1780 1790
pF1KB4 EYLIDFH
:::: :
CCDS46 EYLITFRK
1800
338 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 05:35:40 2016 done: Sat Nov 5 05:35:41 2016
Total Scan time: 2.320 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]