Result of FASTA (omim) for
pF1KB4080
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB4080, 338 aa
1>>>pF1KB4080 338 - 338 aa - 338 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7616+/-0.000408; mu= 13.3851+/- 0.025
mean_var=71.8008+/-15.164, 0's: 0 Z-trim(111.6): 73 B-trim: 223 in 1/48
Lambda= 0.151359
statistics sampled from 20097 (20186) to 20097 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.613), E-opt: 0.2 (0.237), width: 16
Scan time: 7.070
The best scores are: opt bits E(85289)
NP_065100 (OMIM: 616706) poly [ADP-ribose] polymer ( 338) 2365 525.9 4.8e-149
XP_005253768 (OMIM: 616706) PREDICTED: poly [ADP-r ( 331) 2309 513.7 2.2e-145
XP_011519273 (OMIM: 616706) PREDICTED: poly [ADP-r ( 331) 2309 513.7 2.2e-145
XP_016875159 (OMIM: 616706) PREDICTED: poly [ADP-r ( 331) 2309 513.7 2.2e-145
XP_011519275 (OMIM: 616706) PREDICTED: poly [ADP-r ( 331) 2309 513.7 2.2e-145
XP_011519272 (OMIM: 616706) PREDICTED: poly [ADP-r ( 331) 2309 513.7 2.2e-145
XP_016875160 (OMIM: 616706) PREDICTED: poly [ADP-r ( 257) 1733 387.8 1.3e-107
NP_001273451 (OMIM: 616706) poly [ADP-ribose] poly ( 257) 1733 387.8 1.3e-107
NP_001273450 (OMIM: 616706) poly [ADP-ribose] poly ( 257) 1733 387.8 1.3e-107
NP_073587 (OMIM: 612481) poly [ADP-ribose] polymer ( 701) 496 117.9 6.5e-26
NP_001171647 (OMIM: 612480) TCDD-inducible poly [A ( 657) 332 82.1 3.7e-15
NP_001171646 (OMIM: 612480) TCDD-inducible poly [A ( 657) 332 82.1 3.7e-15
NP_056323 (OMIM: 612480) TCDD-inducible poly [ADP- ( 657) 332 82.1 3.7e-15
NP_064504 (OMIM: 607312) zinc finger CCCH-type ant ( 902) 309 77.1 1.6e-13
XP_005250558 (OMIM: 607312) PREDICTED: zinc finger (1024) 309 77.1 1.8e-13
XP_011510781 (OMIM: 612066) PREDICTED: poly [ADP-r ( 425) 287 72.2 2.3e-12
XP_011510780 (OMIM: 612066) PREDICTED: poly [ADP-r ( 425) 287 72.2 2.3e-12
XP_016861281 (OMIM: 612066) PREDICTED: poly [ADP-r ( 425) 287 72.2 2.3e-12
NP_689828 (OMIM: 612066) poly [ADP-ribose] polymer ( 444) 287 72.2 2.4e-12
NP_001295250 (OMIM: 612066) poly [ADP-ribose] poly ( 375) 285 71.7 2.8e-12
XP_011510779 (OMIM: 612066) PREDICTED: poly [ADP-r ( 552) 287 72.2 2.9e-12
XP_005247217 (OMIM: 612066) PREDICTED: poly [ADP-r ( 602) 287 72.2 3.1e-12
XP_011510778 (OMIM: 612066) PREDICTED: poly [ADP-r ( 628) 287 72.2 3.2e-12
XP_011510777 (OMIM: 612066) PREDICTED: poly [ADP-r ( 638) 287 72.3 3.3e-12
NP_001106995 (OMIM: 612066) poly [ADP-ribose] poly ( 678) 287 72.3 3.4e-12
NP_001295249 (OMIM: 612066) poly [ADP-ribose] poly ( 483) 285 71.8 3.5e-12
XP_016861280 (OMIM: 612066) PREDICTED: poly [ADP-r ( 533) 285 71.8 3.8e-12
XP_005247216 (OMIM: 612066) PREDICTED: poly [ADP-r ( 609) 285 71.8 4.2e-12
NP_060024 (OMIM: 610028) poly [ADP-ribose] polymer (1801) 279 70.7 2.7e-11
NP_003738 (OMIM: 603303) tankyrase-1 [Homo sapiens (1327) 243 62.8 4.8e-09
XP_016872189 (OMIM: 607128) PREDICTED: tankyrase-2 ( 977) 237 61.4 9.2e-09
XP_016872188 (OMIM: 607128) PREDICTED: tankyrase-2 (1059) 237 61.4 9.8e-09
XP_016872186 (OMIM: 607128) PREDICTED: tankyrase-2 (1062) 237 61.4 9.9e-09
XP_016872187 (OMIM: 607128) PREDICTED: tankyrase-2 (1062) 237 61.4 9.9e-09
NP_079511 (OMIM: 607128) tankyrase-2 [Homo sapiens (1166) 237 61.4 1.1e-08
XP_016872185 (OMIM: 607128) PREDICTED: tankyrase-2 (1169) 237 61.4 1.1e-08
XP_011538515 (OMIM: 607128) PREDICTED: tankyrase-2 (1187) 237 61.4 1.1e-08
XP_005270242 (OMIM: 607128) PREDICTED: tankyrase-2 (1190) 237 61.4 1.1e-08
XP_011542148 (OMIM: 603303) PREDICTED: tankyrase-1 (1301) 206 54.7 1.3e-06
XP_006716326 (OMIM: 603303) PREDICTED: tankyrase-1 (1316) 206 54.7 1.3e-06
XP_011542147 (OMIM: 603303) PREDICTED: tankyrase-1 (1316) 206 54.7 1.3e-06
XP_011515638 (OMIM: 609564) PREDICTED: poly [ADP-r (1016) 192 51.6 8.6e-06
NP_116178 (OMIM: 609564) poly [ADP-ribose] polymer (1025) 192 51.6 8.7e-06
NP_001304824 (OMIM: 609564) poly [ADP-ribose] poly (1037) 192 51.6 8.8e-06
XP_011538517 (OMIM: 607128) PREDICTED: tankyrase-2 ( 695) 186 50.2 1.5e-05
XP_011542149 (OMIM: 603303) PREDICTED: tankyrase-1 (1223) 188 50.8 1.9e-05
>>NP_065100 (OMIM: 616706) poly [ADP-ribose] polymerase (338 aa)
initn: 2365 init1: 2365 opt: 2365 Z-score: 2796.9 bits: 525.9 E(85289): 4.8e-149
Smith-Waterman score: 2365; 100.0% identity (100.0% similar) in 338 aa overlap (1-338:1-338)
10 20 30 40 50 60
pF1KB4 MWEANPEMFHKAEELFSKTTNNEVDDMDTSDTQWGWFYLAECGKWHMFQPDTNSQCSVSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 MWEANPEMFHKAEELFSKTTNNEVDDMDTSDTQWGWFYLAECGKWHMFQPDTNSQCSVSS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 EDIEKSFKTNPCGSISFTTSKFSYKIDFAEMKQMNLTTGKQRLIKRAPFSISAFSYICEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 EDIEKSFKTNPCGSISFTTSKFSYKIDFAEMKQMNLTTGKQRLIKRAPFSISAFSYICEN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 EAIPMPPHWENVNTQVPYQLIPLHNQTHEYNEVANLFGKTMDRNRIKRIQRIQNLDLWEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 EAIPMPPHWENVNTQVPYQLIPLHNQTHEYNEVANLFGKTMDRNRIKRIQRIQNLDLWEF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 FCRKKAQLKKKRGVPQINEQMLFHGTSSEFVEAICIHNFDWRINGIHGAVFGKGTYFARD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 FCRKKAQLKKKRGVPQINEQMLFHGTSSEFVEAICIHNFDWRINGIHGAVFGKGTYFARD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 AAYSSRFCKDDIKHGNTFQIHGVSLQQRHLFRTYKSMFLARVLIGDYINGDSKYMRPPSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 AAYSSRFCKDDIKHGNTFQIHGVSLQQRHLFRTYKSMFLARVLIGDYINGDSKYMRPPSK
250 260 270 280 290 300
310 320 330
pF1KB4 DGSYVNLYDSCVDDTWNPKIFVVFDANQIYPEYLIDFH
::::::::::::::::::::::::::::::::::::::
NP_065 DGSYVNLYDSCVDDTWNPKIFVVFDANQIYPEYLIDFH
310 320 330
>>XP_005253768 (OMIM: 616706) PREDICTED: poly [ADP-ribos (331 aa)
initn: 2309 init1: 2309 opt: 2309 Z-score: 2730.9 bits: 513.7 E(85289): 2.2e-145
Smith-Waterman score: 2309; 100.0% identity (100.0% similar) in 331 aa overlap (8-338:1-331)
10 20 30 40 50 60
pF1KB4 MWEANPEMFHKAEELFSKTTNNEVDDMDTSDTQWGWFYLAECGKWHMFQPDTNSQCSVSS
:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MFHKAEELFSKTTNNEVDDMDTSDTQWGWFYLAECGKWHMFQPDTNSQCSVSS
10 20 30 40 50
70 80 90 100 110 120
pF1KB4 EDIEKSFKTNPCGSISFTTSKFSYKIDFAEMKQMNLTTGKQRLIKRAPFSISAFSYICEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EDIEKSFKTNPCGSISFTTSKFSYKIDFAEMKQMNLTTGKQRLIKRAPFSISAFSYICEN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB4 EAIPMPPHWENVNTQVPYQLIPLHNQTHEYNEVANLFGKTMDRNRIKRIQRIQNLDLWEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EAIPMPPHWENVNTQVPYQLIPLHNQTHEYNEVANLFGKTMDRNRIKRIQRIQNLDLWEF
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB4 FCRKKAQLKKKRGVPQINEQMLFHGTSSEFVEAICIHNFDWRINGIHGAVFGKGTYFARD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FCRKKAQLKKKRGVPQINEQMLFHGTSSEFVEAICIHNFDWRINGIHGAVFGKGTYFARD
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB4 AAYSSRFCKDDIKHGNTFQIHGVSLQQRHLFRTYKSMFLARVLIGDYINGDSKYMRPPSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AAYSSRFCKDDIKHGNTFQIHGVSLQQRHLFRTYKSMFLARVLIGDYINGDSKYMRPPSK
240 250 260 270 280 290
310 320 330
pF1KB4 DGSYVNLYDSCVDDTWNPKIFVVFDANQIYPEYLIDFH
::::::::::::::::::::::::::::::::::::::
XP_005 DGSYVNLYDSCVDDTWNPKIFVVFDANQIYPEYLIDFH
300 310 320 330
>>XP_011519273 (OMIM: 616706) PREDICTED: poly [ADP-ribos (331 aa)
initn: 2309 init1: 2309 opt: 2309 Z-score: 2730.9 bits: 513.7 E(85289): 2.2e-145
Smith-Waterman score: 2309; 100.0% identity (100.0% similar) in 331 aa overlap (8-338:1-331)
10 20 30 40 50 60
pF1KB4 MWEANPEMFHKAEELFSKTTNNEVDDMDTSDTQWGWFYLAECGKWHMFQPDTNSQCSVSS
:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MFHKAEELFSKTTNNEVDDMDTSDTQWGWFYLAECGKWHMFQPDTNSQCSVSS
10 20 30 40 50
70 80 90 100 110 120
pF1KB4 EDIEKSFKTNPCGSISFTTSKFSYKIDFAEMKQMNLTTGKQRLIKRAPFSISAFSYICEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EDIEKSFKTNPCGSISFTTSKFSYKIDFAEMKQMNLTTGKQRLIKRAPFSISAFSYICEN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB4 EAIPMPPHWENVNTQVPYQLIPLHNQTHEYNEVANLFGKTMDRNRIKRIQRIQNLDLWEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EAIPMPPHWENVNTQVPYQLIPLHNQTHEYNEVANLFGKTMDRNRIKRIQRIQNLDLWEF
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB4 FCRKKAQLKKKRGVPQINEQMLFHGTSSEFVEAICIHNFDWRINGIHGAVFGKGTYFARD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FCRKKAQLKKKRGVPQINEQMLFHGTSSEFVEAICIHNFDWRINGIHGAVFGKGTYFARD
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB4 AAYSSRFCKDDIKHGNTFQIHGVSLQQRHLFRTYKSMFLARVLIGDYINGDSKYMRPPSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AAYSSRFCKDDIKHGNTFQIHGVSLQQRHLFRTYKSMFLARVLIGDYINGDSKYMRPPSK
240 250 260 270 280 290
310 320 330
pF1KB4 DGSYVNLYDSCVDDTWNPKIFVVFDANQIYPEYLIDFH
::::::::::::::::::::::::::::::::::::::
XP_011 DGSYVNLYDSCVDDTWNPKIFVVFDANQIYPEYLIDFH
300 310 320 330
>>XP_016875159 (OMIM: 616706) PREDICTED: poly [ADP-ribos (331 aa)
initn: 2309 init1: 2309 opt: 2309 Z-score: 2730.9 bits: 513.7 E(85289): 2.2e-145
Smith-Waterman score: 2309; 100.0% identity (100.0% similar) in 331 aa overlap (8-338:1-331)
10 20 30 40 50 60
pF1KB4 MWEANPEMFHKAEELFSKTTNNEVDDMDTSDTQWGWFYLAECGKWHMFQPDTNSQCSVSS
:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MFHKAEELFSKTTNNEVDDMDTSDTQWGWFYLAECGKWHMFQPDTNSQCSVSS
10 20 30 40 50
70 80 90 100 110 120
pF1KB4 EDIEKSFKTNPCGSISFTTSKFSYKIDFAEMKQMNLTTGKQRLIKRAPFSISAFSYICEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EDIEKSFKTNPCGSISFTTSKFSYKIDFAEMKQMNLTTGKQRLIKRAPFSISAFSYICEN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB4 EAIPMPPHWENVNTQVPYQLIPLHNQTHEYNEVANLFGKTMDRNRIKRIQRIQNLDLWEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EAIPMPPHWENVNTQVPYQLIPLHNQTHEYNEVANLFGKTMDRNRIKRIQRIQNLDLWEF
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB4 FCRKKAQLKKKRGVPQINEQMLFHGTSSEFVEAICIHNFDWRINGIHGAVFGKGTYFARD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FCRKKAQLKKKRGVPQINEQMLFHGTSSEFVEAICIHNFDWRINGIHGAVFGKGTYFARD
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB4 AAYSSRFCKDDIKHGNTFQIHGVSLQQRHLFRTYKSMFLARVLIGDYINGDSKYMRPPSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AAYSSRFCKDDIKHGNTFQIHGVSLQQRHLFRTYKSMFLARVLIGDYINGDSKYMRPPSK
240 250 260 270 280 290
310 320 330
pF1KB4 DGSYVNLYDSCVDDTWNPKIFVVFDANQIYPEYLIDFH
::::::::::::::::::::::::::::::::::::::
XP_016 DGSYVNLYDSCVDDTWNPKIFVVFDANQIYPEYLIDFH
300 310 320 330
>>XP_011519275 (OMIM: 616706) PREDICTED: poly [ADP-ribos (331 aa)
initn: 2309 init1: 2309 opt: 2309 Z-score: 2730.9 bits: 513.7 E(85289): 2.2e-145
Smith-Waterman score: 2309; 100.0% identity (100.0% similar) in 331 aa overlap (8-338:1-331)
10 20 30 40 50 60
pF1KB4 MWEANPEMFHKAEELFSKTTNNEVDDMDTSDTQWGWFYLAECGKWHMFQPDTNSQCSVSS
:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MFHKAEELFSKTTNNEVDDMDTSDTQWGWFYLAECGKWHMFQPDTNSQCSVSS
10 20 30 40 50
70 80 90 100 110 120
pF1KB4 EDIEKSFKTNPCGSISFTTSKFSYKIDFAEMKQMNLTTGKQRLIKRAPFSISAFSYICEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EDIEKSFKTNPCGSISFTTSKFSYKIDFAEMKQMNLTTGKQRLIKRAPFSISAFSYICEN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB4 EAIPMPPHWENVNTQVPYQLIPLHNQTHEYNEVANLFGKTMDRNRIKRIQRIQNLDLWEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EAIPMPPHWENVNTQVPYQLIPLHNQTHEYNEVANLFGKTMDRNRIKRIQRIQNLDLWEF
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB4 FCRKKAQLKKKRGVPQINEQMLFHGTSSEFVEAICIHNFDWRINGIHGAVFGKGTYFARD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FCRKKAQLKKKRGVPQINEQMLFHGTSSEFVEAICIHNFDWRINGIHGAVFGKGTYFARD
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB4 AAYSSRFCKDDIKHGNTFQIHGVSLQQRHLFRTYKSMFLARVLIGDYINGDSKYMRPPSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AAYSSRFCKDDIKHGNTFQIHGVSLQQRHLFRTYKSMFLARVLIGDYINGDSKYMRPPSK
240 250 260 270 280 290
310 320 330
pF1KB4 DGSYVNLYDSCVDDTWNPKIFVVFDANQIYPEYLIDFH
::::::::::::::::::::::::::::::::::::::
XP_011 DGSYVNLYDSCVDDTWNPKIFVVFDANQIYPEYLIDFH
300 310 320 330
>>XP_011519272 (OMIM: 616706) PREDICTED: poly [ADP-ribos (331 aa)
initn: 2309 init1: 2309 opt: 2309 Z-score: 2730.9 bits: 513.7 E(85289): 2.2e-145
Smith-Waterman score: 2309; 100.0% identity (100.0% similar) in 331 aa overlap (8-338:1-331)
10 20 30 40 50 60
pF1KB4 MWEANPEMFHKAEELFSKTTNNEVDDMDTSDTQWGWFYLAECGKWHMFQPDTNSQCSVSS
:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MFHKAEELFSKTTNNEVDDMDTSDTQWGWFYLAECGKWHMFQPDTNSQCSVSS
10 20 30 40 50
70 80 90 100 110 120
pF1KB4 EDIEKSFKTNPCGSISFTTSKFSYKIDFAEMKQMNLTTGKQRLIKRAPFSISAFSYICEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EDIEKSFKTNPCGSISFTTSKFSYKIDFAEMKQMNLTTGKQRLIKRAPFSISAFSYICEN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB4 EAIPMPPHWENVNTQVPYQLIPLHNQTHEYNEVANLFGKTMDRNRIKRIQRIQNLDLWEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EAIPMPPHWENVNTQVPYQLIPLHNQTHEYNEVANLFGKTMDRNRIKRIQRIQNLDLWEF
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB4 FCRKKAQLKKKRGVPQINEQMLFHGTSSEFVEAICIHNFDWRINGIHGAVFGKGTYFARD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FCRKKAQLKKKRGVPQINEQMLFHGTSSEFVEAICIHNFDWRINGIHGAVFGKGTYFARD
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB4 AAYSSRFCKDDIKHGNTFQIHGVSLQQRHLFRTYKSMFLARVLIGDYINGDSKYMRPPSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AAYSSRFCKDDIKHGNTFQIHGVSLQQRHLFRTYKSMFLARVLIGDYINGDSKYMRPPSK
240 250 260 270 280 290
310 320 330
pF1KB4 DGSYVNLYDSCVDDTWNPKIFVVFDANQIYPEYLIDFH
::::::::::::::::::::::::::::::::::::::
XP_011 DGSYVNLYDSCVDDTWNPKIFVVFDANQIYPEYLIDFH
300 310 320 330
>>XP_016875160 (OMIM: 616706) PREDICTED: poly [ADP-ribos (257 aa)
initn: 1733 init1: 1733 opt: 1733 Z-score: 2052.9 bits: 387.8 E(85289): 1.3e-107
Smith-Waterman score: 1733; 99.6% identity (100.0% similar) in 250 aa overlap (89-338:8-257)
60 70 80 90 100 110
pF1KB4 SSEDIEKSFKTNPCGSISFTTSKFSYKIDFAEMKQMNLTTGKQRLIKRAPFSISAFSYIC
.:::::::::::::::::::::::::::::
XP_016 MWEVAHVSEMKQMNLTTGKQRLIKRAPFSISAFSYIC
10 20 30
120 130 140 150 160 170
pF1KB4 ENEAIPMPPHWENVNTQVPYQLIPLHNQTHEYNEVANLFGKTMDRNRIKRIQRIQNLDLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ENEAIPMPPHWENVNTQVPYQLIPLHNQTHEYNEVANLFGKTMDRNRIKRIQRIQNLDLW
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB4 EFFCRKKAQLKKKRGVPQINEQMLFHGTSSEFVEAICIHNFDWRINGIHGAVFGKGTYFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EFFCRKKAQLKKKRGVPQINEQMLFHGTSSEFVEAICIHNFDWRINGIHGAVFGKGTYFA
100 110 120 130 140 150
240 250 260 270 280 290
pF1KB4 RDAAYSSRFCKDDIKHGNTFQIHGVSLQQRHLFRTYKSMFLARVLIGDYINGDSKYMRPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RDAAYSSRFCKDDIKHGNTFQIHGVSLQQRHLFRTYKSMFLARVLIGDYINGDSKYMRPP
160 170 180 190 200 210
300 310 320 330
pF1KB4 SKDGSYVNLYDSCVDDTWNPKIFVVFDANQIYPEYLIDFH
::::::::::::::::::::::::::::::::::::::::
XP_016 SKDGSYVNLYDSCVDDTWNPKIFVVFDANQIYPEYLIDFH
220 230 240 250
>>NP_001273451 (OMIM: 616706) poly [ADP-ribose] polymera (257 aa)
initn: 1733 init1: 1733 opt: 1733 Z-score: 2052.9 bits: 387.8 E(85289): 1.3e-107
Smith-Waterman score: 1733; 99.6% identity (100.0% similar) in 250 aa overlap (89-338:8-257)
60 70 80 90 100 110
pF1KB4 SSEDIEKSFKTNPCGSISFTTSKFSYKIDFAEMKQMNLTTGKQRLIKRAPFSISAFSYIC
.:::::::::::::::::::::::::::::
NP_001 MWEVAHVSEMKQMNLTTGKQRLIKRAPFSISAFSYIC
10 20 30
120 130 140 150 160 170
pF1KB4 ENEAIPMPPHWENVNTQVPYQLIPLHNQTHEYNEVANLFGKTMDRNRIKRIQRIQNLDLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENEAIPMPPHWENVNTQVPYQLIPLHNQTHEYNEVANLFGKTMDRNRIKRIQRIQNLDLW
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB4 EFFCRKKAQLKKKRGVPQINEQMLFHGTSSEFVEAICIHNFDWRINGIHGAVFGKGTYFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EFFCRKKAQLKKKRGVPQINEQMLFHGTSSEFVEAICIHNFDWRINGIHGAVFGKGTYFA
100 110 120 130 140 150
240 250 260 270 280 290
pF1KB4 RDAAYSSRFCKDDIKHGNTFQIHGVSLQQRHLFRTYKSMFLARVLIGDYINGDSKYMRPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RDAAYSSRFCKDDIKHGNTFQIHGVSLQQRHLFRTYKSMFLARVLIGDYINGDSKYMRPP
160 170 180 190 200 210
300 310 320 330
pF1KB4 SKDGSYVNLYDSCVDDTWNPKIFVVFDANQIYPEYLIDFH
::::::::::::::::::::::::::::::::::::::::
NP_001 SKDGSYVNLYDSCVDDTWNPKIFVVFDANQIYPEYLIDFH
220 230 240 250
>>NP_001273450 (OMIM: 616706) poly [ADP-ribose] polymera (257 aa)
initn: 1733 init1: 1733 opt: 1733 Z-score: 2052.9 bits: 387.8 E(85289): 1.3e-107
Smith-Waterman score: 1733; 99.6% identity (100.0% similar) in 250 aa overlap (89-338:8-257)
60 70 80 90 100 110
pF1KB4 SSEDIEKSFKTNPCGSISFTTSKFSYKIDFAEMKQMNLTTGKQRLIKRAPFSISAFSYIC
.:::::::::::::::::::::::::::::
NP_001 MWEVAHVSEMKQMNLTTGKQRLIKRAPFSISAFSYIC
10 20 30
120 130 140 150 160 170
pF1KB4 ENEAIPMPPHWENVNTQVPYQLIPLHNQTHEYNEVANLFGKTMDRNRIKRIQRIQNLDLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENEAIPMPPHWENVNTQVPYQLIPLHNQTHEYNEVANLFGKTMDRNRIKRIQRIQNLDLW
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB4 EFFCRKKAQLKKKRGVPQINEQMLFHGTSSEFVEAICIHNFDWRINGIHGAVFGKGTYFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EFFCRKKAQLKKKRGVPQINEQMLFHGTSSEFVEAICIHNFDWRINGIHGAVFGKGTYFA
100 110 120 130 140 150
240 250 260 270 280 290
pF1KB4 RDAAYSSRFCKDDIKHGNTFQIHGVSLQQRHLFRTYKSMFLARVLIGDYINGDSKYMRPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RDAAYSSRFCKDDIKHGNTFQIHGVSLQQRHLFRTYKSMFLARVLIGDYINGDSKYMRPP
160 170 180 190 200 210
300 310 320 330
pF1KB4 SKDGSYVNLYDSCVDDTWNPKIFVVFDANQIYPEYLIDFH
::::::::::::::::::::::::::::::::::::::::
NP_001 SKDGSYVNLYDSCVDDTWNPKIFVVFDANQIYPEYLIDFH
220 230 240 250
>>NP_073587 (OMIM: 612481) poly [ADP-ribose] polymerase (701 aa)
initn: 657 init1: 423 opt: 496 Z-score: 586.2 bits: 117.9 E(85289): 6.5e-26
Smith-Waterman score: 763; 36.5% identity (66.6% similar) in 323 aa overlap (32-337:375-677)
10 20 30 40 50
pF1KB4 WEANPEMFHKAEELFSKTTNNEVDDMDTSDTQWGWFYLAECGKWHMF--QPDTNSQCSVS
:.: :.. : :.:. . : .. .::
NP_073 NFNAMTYGATQARRLSTASSVTKPPHFILTTDWIWYWSDEFGSWQEYGRQGTVHPVTTVS
350 360 370 380 390 400
60 70 80 90 100 110
pF1KB4 SEDIEKSF-------KTNPCGSISFTTSKFSYKIDFAEMKQMNLTTGKQRLIKRAPFSIS
: :.::.. . . ....: ..: .:..:: . : ::. : . . : : .:
NP_073 SSDVEKAYLAYCTPGSDGQAATLKFQAGKHNYELDFKAFVQKNLVYGTTKKVCRRPKYVS
410 420 430 440 450 460
120 130 140 150 160
pF1KB4 ---AFSYICENEAIP----MPPHWENVNTQVP-YQLIPLHNQTHEYNEVANLFGKTMDRN
. .. : .: .: .:.. : .: : : ....::..: :::..:.
NP_073 PQDVTTMQTCNTKFPGPKSIPDYWDSSALPDPGFQKITLSSSSEEYQKVWNLFNRTLPFY
470 480 490 500 510 520
170 180 190 200 210 220
pF1KB4 RIKRIQRIQNLDLWEFFCRKKAQLKKKRGVPQINEQMLFHGTSSEFVEAICIHNFDWRIN
...:.:.::: ::: . .:.:..:. : ..:..::::::. ::.::: .:::::.
NP_073 FVQKIERVQNLALWEVYQWQKGQMQKQNGGKAVDERQLFHGTSAIFVDAICQQNFDWRVC
530 540 550 560 570 580
230 240 250 260 270 280
pF1KB4 GIHGAVFGKGTYFARDAAYSSRFCKDDIKHGNTFQIHGVSLQQRHLFRTYKSMFLARVLI
:.::. .:::.::::::::: .. :.: : : .:::::::.
NP_073 GVHGTSYGKGSYFARDAAYSHHYSKSDT------QTH--------------TMFLARVLV
590 600 610 620
290 300 310 320 330
pF1KB4 GDYINGDSKYMRPPSKDGSYVNLYDSCVDDTWNPKIFVVFDANQIYPEYLIDFH
:... :.....:::.:.: .:::::... .:.:::.:. .:.::::.:..
NP_073 GEFVRGNASFVRPPAKEGWSNAFYDSCVNSVSDPSIFVIFEKHQVYPEYVIQYTTSSKPS
630 640 650 660 670 680
NP_073 VTPSILLALGSLFSSRQ
690 700
338 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 05:35:41 2016 done: Sat Nov 5 05:35:42 2016
Total Scan time: 7.070 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]