FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB4107, 641 aa
  1>>>pF1KB4107 641 - 641 aa - 641 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 14.3862+/-0.0013; mu= -15.0503+/- 0.080
 mean_var=845.0825+/-172.816, 0's: 0 Z-trim(117.9): 118  B-trim: 57 in 1/52
 Lambda= 0.044119
 statistics sampled from 18627 (18742) to 18627 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.811), E-opt: 0.2 (0.576), width:  16
 Scan time:  5.030

The best scores are:                                      opt bits E(32554)
CCDS8666.1 WBP11 gene_id:51729|Hs108|chr12         ( 641) 4493 301.3 2.7e-81


>>CCDS8666.1 WBP11 gene_id:51729|Hs108|chr12              (641 aa)
 initn: 4493 init1: 4493 opt: 4493  Z-score: 1573.1  bits: 301.3 E(32554): 2.7e-81
Smith-Waterman score: 4493; 100.0% identity (100.0% similar) in 641 aa overlap (1-641:1-641)

               10        20        30        40        50        60
pF1KB4 MGRRSTSSTKSGKFMNPTDQARKEARKRELKKNKKQRMMVRAAVLKMKDPKQIIRDMEKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS86 MGRRSTSSTKSGKFMNPTDQARKEARKRELKKNKKQRMMVRAAVLKMKDPKQIIRDMEKL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 DEMEFNPVQQPQLNEKVLKDKRKKLRETFERILRLYEKENPDIYKELRKLEVEYEQKRAQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS86 DEMEFNPVQQPQLNEKVLKDKRKKLRETFERILRLYEKENPDIYKELRKLEVEYEQKRAQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 LSQYFDAVKNAQHVEVESIPLPDMPHAPSNILIQDIPLPGAQPPSILKKTSAYGPPTRAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS86 LSQYFDAVKNAQHVEVESIPLPDMPHAPSNILIQDIPLPGAQPPSILKKTSAYGPPTRAV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 SILPLLGHGVPRLPPGRKPPGPPPGPPPPQVVQMYGRKVGFALDLPPRRRDEDMLYSPEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS86 SILPLLGHGVPRLPPGRKPPGPPPGPPPPQVVQMYGRKVGFALDLPPRRRDEDMLYSPEL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 AQRGHDDDVSSTSEDDGYPEDMDQDKHDDSTDDSDTDKSDGESDGDEFVHRDNGERDNNE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS86 AQRGHDDDVSSTSEDDGYPEDMDQDKHDDSTDDSDTDKSDGESDGDEFVHRDNGERDNNE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB4 EKKSGLSVRFADMPGKSRKKKKNMKELTPLQAMMLRMAGQEIPEEGREVEEFSEDDDEDD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS86 EKKSGLSVRFADMPGKSRKKKKNMKELTPLQAMMLRMAGQEIPEEGREVEEFSEDDDEDD
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB4 SDDSEAEKQSQKQHKEESHSDGTSTASSQQQAPPQSVPPSQIQAPPMPGPPPLGPPPAPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS86 SDDSEAEKQSQKQHKEESHSDGTSTASSQQQAPPQSVPPSQIQAPPMPGPPPLGPPPAPP
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB4 LRPPGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS86 LRPPGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPP
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB4 GPPPRGPPPRLPPPAPPGIPPPRPGMMRPPLVPPLGPAPPGLFPPAPLPNPGVLSAPPNL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS86 GPPPRGPPPRLPPPAPPGIPPPRPGMMRPPLVPPLGPAPPGLFPPAPLPNPGVLSAPPNL
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB4 IQRPKADDTSAATIEKKATATISAKPQITNPKAEITRFVPTALRVRRENKGATAAPQRKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS86 IQRPKADDTSAATIEKKATATISAKPQITNPKAEITRFVPTALRVRRENKGATAAPQRKS
              550       560       570       580       590       600

              610       620       630       640 
pF1KB4 EDDSAVPLAKAAPKSGPSVPVSVQTKDDVYEAFMKEMEGLL
       :::::::::::::::::::::::::::::::::::::::::
CCDS86 EDDSAVPLAKAAPKSGPSVPVSVQTKDDVYEAFMKEMEGLL
              610       620       630       640 




641 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 14:23:41 2016 done: Thu Nov  3 14:23:41 2016
 Total Scan time:  5.030 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]