Result of FASTA (omim) for
pF1KB4115
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB4115, 938 aa
1>>>pF1KB4115 938 - 938 aa - 938 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.7302+/-0.000457; mu= 11.0535+/- 0.028
mean_var=197.8206+/-40.509, 0's: 0 Z-trim(117.0): 144 B-trim: 1329 in 1/51
Lambda= 0.091188
statistics sampled from 28465 (28617) to 28465 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.675), E-opt: 0.2 (0.336), width: 16
Scan time: 14.780
The best scores are: opt bits E(85289)
NP_987095 (OMIM: 613369) ATP-dependent RNA helicas ( 938) 6322 845.4 0
XP_016879600 (OMIM: 613369) PREDICTED: ATP-depende ( 938) 6322 845.4 0
XP_006721720 (OMIM: 613369) PREDICTED: ATP-depende ( 938) 6322 845.4 0
NP_031398 (OMIM: 613369) ATP-dependent RNA helicas ( 938) 6322 845.4 0
XP_016879601 (OMIM: 613369) PREDICTED: ATP-depende ( 775) 5214 699.6 1.6e-200
XP_011522561 (OMIM: 613369) PREDICTED: ATP-depende ( 674) 4520 608.2 4.3e-173
NP_001091974 (OMIM: 608469) probable ATP-dependent ( 731) 1253 178.5 1.1e-43
NP_006377 (OMIM: 608469) probable ATP-dependent RN ( 729) 1245 177.4 2.3e-43
NP_004387 (OMIM: 180630) probable ATP-dependent RN ( 614) 1231 175.5 7.2e-43
NP_001307525 (OMIM: 180630) probable ATP-dependent ( 614) 1231 175.5 7.2e-43
NP_001307524 (OMIM: 180630) probable ATP-dependent ( 614) 1231 175.5 7.2e-43
NP_001307526 (OMIM: 180630) probable ATP-dependent ( 614) 1231 175.5 7.2e-43
XP_011534228 (OMIM: 606286) PREDICTED: probable AT ( 604) 1013 146.8 3.1e-34
XP_011534230 (OMIM: 606286) PREDICTED: probable AT ( 529) 1008 146.1 4.4e-34
XP_011534229 (OMIM: 606286) PREDICTED: probable AT ( 529) 1008 146.1 4.4e-34
NP_061135 (OMIM: 606286) probable ATP-dependent RN ( 648) 1008 146.2 5.1e-34
XP_016866492 (OMIM: 606286) PREDICTED: probable AT ( 439) 973 141.4 9.4e-33
XP_011541799 (OMIM: 605281) PREDICTED: probable AT ( 678) 876 128.8 8.9e-29
NP_001160006 (OMIM: 605281) probable ATP-dependent ( 575) 874 128.5 9.5e-29
NP_001136021 (OMIM: 605281) probable ATP-dependent ( 690) 874 128.6 1.1e-28
XP_011541797 (OMIM: 605281) PREDICTED: probable AT ( 698) 874 128.6 1.1e-28
NP_001160005 (OMIM: 605281) probable ATP-dependent ( 704) 874 128.6 1.1e-28
NP_077726 (OMIM: 605281) probable ATP-dependent RN ( 724) 874 128.6 1.1e-28
XP_011508337 (OMIM: 174300,615464) PREDICTED: prob ( 619) 823 121.8 1e-26
XP_016857921 (OMIM: 174300,615464) PREDICTED: prob ( 619) 823 121.8 1e-26
XP_016857920 (OMIM: 174300,615464) PREDICTED: prob ( 619) 823 121.8 1e-26
NP_001026895 (OMIM: 174300,615464) probable ATP-de ( 619) 823 121.8 1e-26
NP_001289481 (OMIM: 400010,415000) ATP-dependent R ( 657) 770 114.9 1.4e-24
NP_004651 (OMIM: 400010,415000) ATP-dependent RNA ( 660) 770 114.9 1.4e-24
NP_001116137 (OMIM: 400010,415000) ATP-dependent R ( 660) 770 114.9 1.4e-24
XP_016884802 (OMIM: 300160,300958) PREDICTED: ATP- ( 476) 767 114.4 1.4e-24
NP_001180346 (OMIM: 300160,300958) ATP-dependent R ( 646) 767 114.5 1.8e-24
NP_001347 (OMIM: 300160,300958) ATP-dependent RNA ( 662) 767 114.5 1.8e-24
XP_016884803 (OMIM: 300160,300958) PREDICTED: ATP- ( 475) 764 114.0 1.9e-24
NP_001180345 (OMIM: 300160,300958) ATP-dependent R ( 661) 764 114.1 2.4e-24
NP_057439 (OMIM: 615428) probable ATP-dependent RN ( 455) 759 113.3 2.9e-24
XP_011542194 (OMIM: 300160,300958) PREDICTED: ATP- ( 598) 743 111.3 1.5e-23
NP_001307110 (OMIM: 174300,615464) probable ATP-de ( 567) 740 110.9 1.9e-23
XP_006711625 (OMIM: 174300,615464) PREDICTED: prob ( 557) 738 110.6 2.3e-23
NP_057306 (OMIM: 608170,616871) probable ATP-depen ( 622) 737 110.5 2.7e-23
NP_001308661 (OMIM: 608170,616871) probable ATP-de ( 496) 724 108.7 7.4e-23
NP_001308759 (OMIM: 608170,616871) probable ATP-de ( 496) 724 108.7 7.4e-23
NP_060365 (OMIM: 616621) probable ATP-dependent RN ( 796) 720 108.4 1.5e-22
NP_001311124 (OMIM: 400010,415000) ATP-dependent R ( 637) 688 104.1 2.4e-21
NP_076977 (OMIM: 611665) ATP-dependent RNA helicas ( 881) 690 104.5 2.5e-21
NP_001104792 (OMIM: 611665) ATP-dependent RNA heli ( 882) 690 104.5 2.5e-21
NP_076950 (OMIM: 610373) ATP-dependent RNA helicas ( 737) 667 101.4 1.8e-20
XP_016872115 (OMIM: 610373) PREDICTED: ATP-depende ( 737) 667 101.4 1.8e-20
NP_055555 (OMIM: 268305,608546) eukaryotic initiat ( 411) 662 100.5 1.9e-20
XP_016872117 (OMIM: 610373) PREDICTED: ATP-depende ( 672) 655 99.8 5e-20
>>NP_987095 (OMIM: 613369) ATP-dependent RNA helicase DD (938 aa)
initn: 6322 init1: 6322 opt: 6322 Z-score: 4507.9 bits: 845.4 E(85289): 0
Smith-Waterman score: 6322; 100.0% identity (100.0% similar) in 938 aa overlap (1-938:1-938)
10 20 30 40 50 60
pF1KB4 MNWNKGGPGTKRGFGFGGFAISAGKKEEPKLPQQSHSAFGATSSSSGFGKSAPPQLPSFY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_987 MNWNKGGPGTKRGFGFGGFAISAGKKEEPKLPQQSHSAFGATSSSSGFGKSAPPQLPSFY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 KIGSKRANFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKPVDSDSDDDPLEAFM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_987 KIGSKRANFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKPVDSDSDDDPLEAFM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 AEVEDQAARDMKRLEEKDKERKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_987 AEVEDQAARDMKRLEEKDKERKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 LEYDSDGNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_987 LEYDSDGNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_987 LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_987 SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB4 YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_987 YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB4 VRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_987 VRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB4 GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_987 GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB4 ISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_987 ISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYT
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB4 LLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_987 LLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGY
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB4 RERPGLGSENMDRGNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAASLSNQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_987 RERPGLGSENMDRGNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAASLSNQK
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB4 AGSSAAGASGWTSAGSLNSVPTNSAQQGHNSPDSPVTSAAKGIPGFGNTGNISGAPVTYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_987 AGSSAAGASGWTSAGSLNSVPTNSAQQGHNSPDSPVTSAAKGIPGFGNTGNISGAPVTYP
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB4 SAGAQGVNNTASGNNSREGTGGSNGKRERYTENRGSSRHSHGETGNRHSDSPRHGDGGRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_987 SAGAQGVNNTASGNNSREGTGGSNGKRERYTENRGSSRHSHGETGNRHSDSPRHGDGGRH
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB4 GDGYRHPESSSRHTDGHRHGENRHGGSAGRHGENRGANDGRNGESRKEAFNRESKMEPKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_987 GDGYRHPESSSRHTDGHRHGENRHGGSAGRHGENRGANDGRNGESRKEAFNRESKMEPKM
850 860 870 880 890 900
910 920 930
pF1KB4 EPKVDSSKMDKVDSKTDKTADGFAVPEPPKRKKSRWDS
::::::::::::::::::::::::::::::::::::::
NP_987 EPKVDSSKMDKVDSKTDKTADGFAVPEPPKRKKSRWDS
910 920 930
>>XP_016879600 (OMIM: 613369) PREDICTED: ATP-dependent R (938 aa)
initn: 6322 init1: 6322 opt: 6322 Z-score: 4507.9 bits: 845.4 E(85289): 0
Smith-Waterman score: 6322; 100.0% identity (100.0% similar) in 938 aa overlap (1-938:1-938)
10 20 30 40 50 60
pF1KB4 MNWNKGGPGTKRGFGFGGFAISAGKKEEPKLPQQSHSAFGATSSSSGFGKSAPPQLPSFY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNWNKGGPGTKRGFGFGGFAISAGKKEEPKLPQQSHSAFGATSSSSGFGKSAPPQLPSFY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 KIGSKRANFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKPVDSDSDDDPLEAFM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KIGSKRANFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKPVDSDSDDDPLEAFM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 AEVEDQAARDMKRLEEKDKERKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AEVEDQAARDMKRLEEKDKERKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 LEYDSDGNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LEYDSDGNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB4 YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB4 VRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB4 GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB4 ISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYT
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB4 LLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGY
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB4 RERPGLGSENMDRGNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAASLSNQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RERPGLGSENMDRGNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAASLSNQK
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB4 AGSSAAGASGWTSAGSLNSVPTNSAQQGHNSPDSPVTSAAKGIPGFGNTGNISGAPVTYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AGSSAAGASGWTSAGSLNSVPTNSAQQGHNSPDSPVTSAAKGIPGFGNTGNISGAPVTYP
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB4 SAGAQGVNNTASGNNSREGTGGSNGKRERYTENRGSSRHSHGETGNRHSDSPRHGDGGRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SAGAQGVNNTASGNNSREGTGGSNGKRERYTENRGSSRHSHGETGNRHSDSPRHGDGGRH
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB4 GDGYRHPESSSRHTDGHRHGENRHGGSAGRHGENRGANDGRNGESRKEAFNRESKMEPKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GDGYRHPESSSRHTDGHRHGENRHGGSAGRHGENRGANDGRNGESRKEAFNRESKMEPKM
850 860 870 880 890 900
910 920 930
pF1KB4 EPKVDSSKMDKVDSKTDKTADGFAVPEPPKRKKSRWDS
::::::::::::::::::::::::::::::::::::::
XP_016 EPKVDSSKMDKVDSKTDKTADGFAVPEPPKRKKSRWDS
910 920 930
>>XP_006721720 (OMIM: 613369) PREDICTED: ATP-dependent R (938 aa)
initn: 6322 init1: 6322 opt: 6322 Z-score: 4507.9 bits: 845.4 E(85289): 0
Smith-Waterman score: 6322; 100.0% identity (100.0% similar) in 938 aa overlap (1-938:1-938)
10 20 30 40 50 60
pF1KB4 MNWNKGGPGTKRGFGFGGFAISAGKKEEPKLPQQSHSAFGATSSSSGFGKSAPPQLPSFY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MNWNKGGPGTKRGFGFGGFAISAGKKEEPKLPQQSHSAFGATSSSSGFGKSAPPQLPSFY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 KIGSKRANFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKPVDSDSDDDPLEAFM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KIGSKRANFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKPVDSDSDDDPLEAFM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 AEVEDQAARDMKRLEEKDKERKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AEVEDQAARDMKRLEEKDKERKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 LEYDSDGNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LEYDSDGNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB4 YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB4 VRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB4 GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB4 ISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYT
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB4 LLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGY
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB4 RERPGLGSENMDRGNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAASLSNQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RERPGLGSENMDRGNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAASLSNQK
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB4 AGSSAAGASGWTSAGSLNSVPTNSAQQGHNSPDSPVTSAAKGIPGFGNTGNISGAPVTYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AGSSAAGASGWTSAGSLNSVPTNSAQQGHNSPDSPVTSAAKGIPGFGNTGNISGAPVTYP
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB4 SAGAQGVNNTASGNNSREGTGGSNGKRERYTENRGSSRHSHGETGNRHSDSPRHGDGGRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SAGAQGVNNTASGNNSREGTGGSNGKRERYTENRGSSRHSHGETGNRHSDSPRHGDGGRH
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB4 GDGYRHPESSSRHTDGHRHGENRHGGSAGRHGENRGANDGRNGESRKEAFNRESKMEPKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GDGYRHPESSSRHTDGHRHGENRHGGSAGRHGENRGANDGRNGESRKEAFNRESKMEPKM
850 860 870 880 890 900
910 920 930
pF1KB4 EPKVDSSKMDKVDSKTDKTADGFAVPEPPKRKKSRWDS
::::::::::::::::::::::::::::::::::::::
XP_006 EPKVDSSKMDKVDSKTDKTADGFAVPEPPKRKKSRWDS
910 920 930
>>NP_031398 (OMIM: 613369) ATP-dependent RNA helicase DD (938 aa)
initn: 6322 init1: 6322 opt: 6322 Z-score: 4507.9 bits: 845.4 E(85289): 0
Smith-Waterman score: 6322; 100.0% identity (100.0% similar) in 938 aa overlap (1-938:1-938)
10 20 30 40 50 60
pF1KB4 MNWNKGGPGTKRGFGFGGFAISAGKKEEPKLPQQSHSAFGATSSSSGFGKSAPPQLPSFY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 MNWNKGGPGTKRGFGFGGFAISAGKKEEPKLPQQSHSAFGATSSSSGFGKSAPPQLPSFY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 KIGSKRANFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKPVDSDSDDDPLEAFM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 KIGSKRANFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKPVDSDSDDDPLEAFM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 AEVEDQAARDMKRLEEKDKERKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 AEVEDQAARDMKRLEEKDKERKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 LEYDSDGNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 LEYDSDGNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB4 YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB4 VRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 VRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB4 GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB4 ISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 ISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYT
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB4 LLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 LLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGY
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB4 RERPGLGSENMDRGNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAASLSNQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 RERPGLGSENMDRGNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAASLSNQK
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB4 AGSSAAGASGWTSAGSLNSVPTNSAQQGHNSPDSPVTSAAKGIPGFGNTGNISGAPVTYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 AGSSAAGASGWTSAGSLNSVPTNSAQQGHNSPDSPVTSAAKGIPGFGNTGNISGAPVTYP
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB4 SAGAQGVNNTASGNNSREGTGGSNGKRERYTENRGSSRHSHGETGNRHSDSPRHGDGGRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 SAGAQGVNNTASGNNSREGTGGSNGKRERYTENRGSSRHSHGETGNRHSDSPRHGDGGRH
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB4 GDGYRHPESSSRHTDGHRHGENRHGGSAGRHGENRGANDGRNGESRKEAFNRESKMEPKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 GDGYRHPESSSRHTDGHRHGENRHGGSAGRHGENRGANDGRNGESRKEAFNRESKMEPKM
850 860 870 880 890 900
910 920 930
pF1KB4 EPKVDSSKMDKVDSKTDKTADGFAVPEPPKRKKSRWDS
::::::::::::::::::::::::::::::::::::::
NP_031 EPKVDSSKMDKVDSKTDKTADGFAVPEPPKRKKSRWDS
910 920 930
>>XP_016879601 (OMIM: 613369) PREDICTED: ATP-dependent R (775 aa)
initn: 5214 init1: 5214 opt: 5214 Z-score: 3721.2 bits: 699.6 E(85289): 1.6e-200
Smith-Waterman score: 5214; 100.0% identity (100.0% similar) in 775 aa overlap (164-938:1-775)
140 150 160 170 180 190
pF1KB4 LEEKDKERKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDNLEYDSDGNPIAPT
::::::::::::::::::::::::::::::
XP_016 MAENPTAGVVQEEEEDNLEYDSDGNPIAPT
10 20 30
200 210 220 230 240 250
pF1KB4 KKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGS
40 50 60 70 80 90
260 270 280 290 300 310
pF1KB4 SFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLI
100 110 120 130 140 150
320 330 340 350 360 370
pF1KB4 HIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKAL
160 170 180 190 200 210
380 390 400 410 420 430
pF1KB4 QEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQ
220 230 240 250 260 270
440 450 460 470 480 490
pF1KB4 TLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLV
280 290 300 310 320 330
500 510 520 530 540 550
pF1KB4 EFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLV
340 350 360 370 380 390
560 570 580 590 600 610
pF1KB4 ATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDL
400 410 420 430 440 450
620 630 640 650 660 670
pF1KB4 VRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRERPGLGSENMDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRERPGLGSENMDR
460 470 480 490 500 510
680 690 700 710 720 730
pF1KB4 GNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAASLSNQKAGSSAAGASGWTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAASLSNQKAGSSAAGASGWTS
520 530 540 550 560 570
740 750 760 770 780 790
pF1KB4 AGSLNSVPTNSAQQGHNSPDSPVTSAAKGIPGFGNTGNISGAPVTYPSAGAQGVNNTASG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AGSLNSVPTNSAQQGHNSPDSPVTSAAKGIPGFGNTGNISGAPVTYPSAGAQGVNNTASG
580 590 600 610 620 630
800 810 820 830 840 850
pF1KB4 NNSREGTGGSNGKRERYTENRGSSRHSHGETGNRHSDSPRHGDGGRHGDGYRHPESSSRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NNSREGTGGSNGKRERYTENRGSSRHSHGETGNRHSDSPRHGDGGRHGDGYRHPESSSRH
640 650 660 670 680 690
860 870 880 890 900 910
pF1KB4 TDGHRHGENRHGGSAGRHGENRGANDGRNGESRKEAFNRESKMEPKMEPKVDSSKMDKVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TDGHRHGENRHGGSAGRHGENRGANDGRNGESRKEAFNRESKMEPKMEPKVDSSKMDKVD
700 710 720 730 740 750
920 930
pF1KB4 SKTDKTADGFAVPEPPKRKKSRWDS
:::::::::::::::::::::::::
XP_016 SKTDKTADGFAVPEPPKRKKSRWDS
760 770
>>XP_011522561 (OMIM: 613369) PREDICTED: ATP-dependent R (674 aa)
initn: 4520 init1: 4520 opt: 4520 Z-score: 3228.5 bits: 608.2 E(85289): 4.3e-173
Smith-Waterman score: 4520; 100.0% identity (100.0% similar) in 674 aa overlap (265-938:1-674)
240 250 260 270 280 290
pF1KB4 LRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMI
::::::::::::::::::::::::::::::
XP_011 MHQIRKSEYTQPTPIQCQGVPVALSGRDMI
10 20 30
300 310 320 330 340 350
pF1KB4 GIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYN
40 50 60 70 80 90
360 370 380 390 400 410
pF1KB4 LRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFD
100 110 120 130 140 150
420 430 440 450 460 470
pF1KB4 MGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQI
160 170 180 190 200 210
480 490 500 510 520 530
pF1KB4 VEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQ
220 230 240 250 260 270
540 550 560 570 580 590
pF1KB4 SERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGE
280 290 300 310 320 330
600 610 620 630 640 650
pF1KB4 KGVAYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KGVAYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIG
340 350 360 370 380 390
660 670 680 690 700 710
pF1KB4 GGGLGYRERPGLGSENMDRGNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GGGLGYRERPGLGSENMDRGNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAA
400 410 420 430 440 450
720 730 740 750 760 770
pF1KB4 SLSNQKAGSSAAGASGWTSAGSLNSVPTNSAQQGHNSPDSPVTSAAKGIPGFGNTGNISG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SLSNQKAGSSAAGASGWTSAGSLNSVPTNSAQQGHNSPDSPVTSAAKGIPGFGNTGNISG
460 470 480 490 500 510
780 790 800 810 820 830
pF1KB4 APVTYPSAGAQGVNNTASGNNSREGTGGSNGKRERYTENRGSSRHSHGETGNRHSDSPRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 APVTYPSAGAQGVNNTASGNNSREGTGGSNGKRERYTENRGSSRHSHGETGNRHSDSPRH
520 530 540 550 560 570
840 850 860 870 880 890
pF1KB4 GDGGRHGDGYRHPESSSRHTDGHRHGENRHGGSAGRHGENRGANDGRNGESRKEAFNRES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GDGGRHGDGYRHPESSSRHTDGHRHGENRHGGSAGRHGENRGANDGRNGESRKEAFNRES
580 590 600 610 620 630
900 910 920 930
pF1KB4 KMEPKMEPKVDSSKMDKVDSKTDKTADGFAVPEPPKRKKSRWDS
::::::::::::::::::::::::::::::::::::::::::::
XP_011 KMEPKMEPKVDSSKMDKVDSKTDKTADGFAVPEPPKRKKSRWDS
640 650 660 670
>>NP_001091974 (OMIM: 608469) probable ATP-dependent RNA (731 aa)
initn: 1232 init1: 714 opt: 1253 Z-score: 905.3 bits: 178.5 E(85289): 1.1e-43
Smith-Waterman score: 1264; 36.2% identity (65.6% similar) in 639 aa overlap (174-789:88-707)
150 160 170 180 190 200
pF1KB4 VKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDNLEYDSDGNPIAPTKKIIDPLPPI
.....: . . :. : ::. .: .
NP_001 EPQALPSPAIRAPLPDLYPFGTMRGGGFGDRDRDRDRGGFGARGGGGLPPKKFGNPGERL
60 70 80 90 100 110
210 220 230 240 250
pF1KB4 DHSEIDY---PPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGA-APPRPGSSFAHFG
... : : :::::: :: :.. ::: .. .::.: .. : :. . :.: .: : .
NP_001 RKKKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHAN
120 130 140 150 160 170
260 270 280 290 300 310
pF1KB4 FDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQK
: . .: . ...:.:::::::: :.:::::::.:::.:::::: :.. : ..:: :
NP_001 FPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQP
180 190 200 210 220 230
320 330 340 350 360 370
pF1KB4 ELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEI
:: ::::: ... ::::: ::.. .:: :.:. .:::. : . :..:.::
NP_001 YLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEI
240 250 260 270 280 290
380 390 400 410 420 430
pF1KB4 VVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSA
. ::::::: ... :::.: .:::.::::::.::::: :.:.:....:::::::..::
NP_001 CIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSA
300 310 320 330 340 350
440 450 460 470 480 490
pF1KB4 TFRKKIEKLARDILIDPIRVVQGDIG-EANEDVTQIVEILHSGPSKWNWLTRRLVEFTSS
:. :....::.:.: : .. :.. ::... :::.. . : . : . . :. .
NP_001 TWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESE-KDHKLIQLMEEIMAE
360 370 380 390 400 410
500 510 520 530 540 550
pF1KB4 --GSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATD
.....:: : ..:. ....: .::: .: ::. :...:.. :.:.:::
NP_001 KENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATD
420 430 440 450 460 470
560 570 580 590 600 610
pF1KB4 VAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRN
::.::::. ..: ::::: . . ..::::::.:. .::.:::..:: . . : .:..
NP_001 VASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKV
480 490 500 510 520 530
620 630 640 650 660 670
pF1KB4 LEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRERPGLGSENM---DR
:: ::: .. .:..:. : :: : : :: :: . .. :. :.
NP_001 LEEANQAINPKLMQLV-------DHRGGGGGGGK----GGRSRYRTTSSANNPNLMYQDE
540 550 560 570 580
680 690 700 710 720
pF1KB4 GNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQ--SQY---KSHFVAA----SLSNQKAGSS
. . . .. . ..... :: . .:.. : : .: : : . .. :..
NP_001 CDRRLRGVKDGGRRDSASYRDRSETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAA
590 600 610 620 630 640
730 740 750 760 770 780
pF1KB4 AAGASGWTS----AGSLNSVPTNSAQQGHNSPDSPVTSAAKGIPGFGNTGNISGAPVTYP
: :.:..:. ::. .. :.:. :..: :... . :.: .:. ..
NP_001 AYGTSSYTAQEYGAGTYGASSTTST--GRSSQ-----SSSQQFSGIGRSGQQPQPLMSQQ
650 660 670 680 690
790 800 810 820 830 840
pF1KB4 SAGAQGVNNTASGNNSREGTGGSNGKRERYTENRGSSRHSHGETGNRHSDSPRHGDGGRH
: :..:
NP_001 FAQPPGATNMIGYMGQTAYQYPPPPPPPPPSRK
700 710 720 730
>>NP_006377 (OMIM: 608469) probable ATP-dependent RNA he (729 aa)
initn: 1228 init1: 714 opt: 1245 Z-score: 899.6 bits: 177.4 E(85289): 2.3e-43
Smith-Waterman score: 1265; 36.1% identity (65.9% similar) in 640 aa overlap (174-789:88-705)
150 160 170 180 190 200
pF1KB4 VKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDNLEYDSDGNPIAPTKKIIDPLPPI
.....: . . :. : ::. .: .
NP_006 EPQALPSPAIRAPLPDLYPFGTMRGGGFGDRDRDRDRGGFGARGGGGLPPKKFGNPGERL
60 70 80 90 100 110
210 220 230 240 250
pF1KB4 DHSEIDY---PPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGA-APPRPGSSFAHFG
... : : :::::: :: :.. ::: .. .::.: .. : :. . :.: .: : .
NP_006 RKKKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHAN
120 130 140 150 160 170
260 270 280 290 300 310
pF1KB4 FDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQK
: . .: . ...:.:::::::: :.:::::::.:::.:::::: :.. : ..:: :
NP_006 FPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQP
180 190 200 210 220 230
320 330 340 350 360 370
pF1KB4 ELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEI
:: ::::: ... ::::: ::.. .:: :.:. .:::. : . :..:.::
NP_006 YLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEI
240 250 260 270 280 290
380 390 400 410 420 430
pF1KB4 VVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSA
. ::::::: ... :::.: .:::.::::::.::::: :.:.:....:::::::..::
NP_006 CIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSA
300 310 320 330 340 350
440 450 460 470 480 490
pF1KB4 TFRKKIEKLARDILIDPIRVVQGDIG-EANEDVTQIVEILHSGPSKWNWLTRRLVEFTSS
:. :....::.:.: : .. :.. ::... :::.. . : . : . . :. .
NP_006 TWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESE-KDHKLIQLMEEIMAE
360 370 380 390 400 410
500 510 520 530 540 550
pF1KB4 --GSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATD
.....:: : ..:. ....: .::: .: ::. :...:.. :.:.:::
NP_006 KENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATD
420 430 440 450 460 470
560 570 580 590 600 610
pF1KB4 VAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRN
::.::::. ..: ::::: . . ..::::::.:. .::.:::..:: . . : .:..
NP_006 VASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKV
480 490 500 510 520 530
620 630 640 650 660 670
pF1KB4 LEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLG-YRERPGLGSENM---D
:: ::: .. .:..:. . .:: : :::: . :: . .. :. :
NP_006 LEEANQAINPKLMQLVDH---------RGGGG-----GGGGRSRYRTTSSANNPNLMYQD
540 550 560 570 580
680 690 700 710 720
pF1KB4 RGNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQ--SQY---KSHFVAA----SLSNQKAGS
. . . . .. . ..... :: . .:.. : : .: : : . .. :.
NP_006 ECDRRLRGVKDGGRRDSASYRDRSETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGA
590 600 610 620 630 640
730 740 750 760 770
pF1KB4 SAAGASGWTS----AGSLNSVPTNSAQQGHNSPDSPVTSAAKGIPGFGNTGNISGAPVTY
.: :.:..:. ::. .. :.:. :..: :... . :.: .:. ..
NP_006 AAYGTSSYTAQEYGAGTYGASSTTST--GRSSQ-----SSSQQFSGIGRSGQQPQPLMSQ
650 660 670 680 690
780 790 800 810 820 830
pF1KB4 PSAGAQGVNNTASGNNSREGTGGSNGKRERYTENRGSSRHSHGETGNRHSDSPRHGDGGR
: :..:
NP_006 QFAQPPGATNMIGYMGQTAYQYPPPPPPPPPSRK
700 710 720
>>NP_004387 (OMIM: 180630) probable ATP-dependent RNA he (614 aa)
initn: 1147 init1: 790 opt: 1231 Z-score: 890.6 bits: 175.5 E(85289): 7.2e-43
Smith-Waterman score: 1231; 37.3% identity (67.9% similar) in 585 aa overlap (192-764:37-607)
170 180 190 200 210 220
pF1KB4 RYMAENPTAGVVQEEEEDNLEYDSDGNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNEH
: .:.. .: . : ::::::.::
NP_004 DRDRGRDRGFGAPRFGGSRAGPLSGKKFGNPGEKLVKKKWNLD----ELPKFEKNFYQEH
10 20 30 40 50 60
230 240 250 260 270 280
pF1KB4 EEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQC
... : :.. :.. .. : : :.: .: . .: ..: : ....:.:: ::
NP_004 PDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQA
70 80 90 100 110 120
290 300 310 320 330 340
pF1KB4 QGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQ
:: :::::: ::.:.:.:::::: ... : ..:: : :: ::::: ... ::::: ::
NP_004 QGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQ
130 140 150 160 170 180
350 360 370 380 390 400
pF1KB4 IHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRV
.. .. .: :.:. .:::. : . :..:.:: . ::::::: .. :::.:.
NP_004 VQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRT
190 200 210 220 230 240
410 420 430 440 450 460
pF1KB4 SYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQ
.:::.::::::.::::: :.:.:....:::::::..:::. :....::.:.: : :..
NP_004 TYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINI
250 260 270 280 290 300
470 480 490 500 510
pF1KB4 GDIG-EANEDVTQIVEILHSGPSKWNWLTRRLVEFTSS--GSVLLFVTKKANAEELANNL
: . ::... :::.. :. : . : : . :. : .....:: : .::. ..
NP_004 GALELSANHNILQIVDVCHD-VEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKM
310 320 330 340 350 360
520 530 540 550 560 570
pF1KB4 KQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARD
...: .::: .:.::. :...::. :.:.:::::.::::. ..: ::::: .
NP_004 RRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNS
370 380 390 400 410 420
580 590 600 610 620 630
pF1KB4 IDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWF
. . ::::::.:. . :.:::..::.. . ..::. :. ::: .. .::.: ...
NP_004 SEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQL-VEDRGS
430 440 450 460 470 480
640 650 660 670 680 690
pF1KB4 RKSRFKGG----KGKKLNIG--GGGLGYRERPGLGSENMDRGNNNVMSNYEAYKPSTGAM
.:: .:: . . . : :: .:.: ::.::: ..... . : ..:..
NP_004 GRSRGRGGMKDDRRDRYSAGKRGGFNTFRDR-----ENYDRGYSSLLKRDFGAKTQNGVY
490 500 510 520 530
700 710 720 730 740 750
pF1KB4 GDRLTAMKAAFQSQYKSHFVAASL-SNQKAGSSAAGASGWTSAGSLNSVPTNSAQQGHNS
. . ...: :.. : . .:. ... .:. : .. . :: .::. .....
NP_004 SAA-NYTNGSFGSNFVSAGIQTSFRTGNPTGTYQNGYDSTQQYGS--NVPNMHNGMNQQA
540 550 560 570 580 590
760 770 780 790 800
pF1KB4 PDSPVTSAAK--GIPGFGNTGNISGAPVTYPSAGAQGVNNTASGNNSREGTGGSNGKRER
:.:.:: : :
NP_004 YAYPATAAAPMIGYPMPTGYSQ
600 610
>>NP_001307525 (OMIM: 180630) probable ATP-dependent RNA (614 aa)
initn: 1147 init1: 790 opt: 1231 Z-score: 890.6 bits: 175.5 E(85289): 7.2e-43
Smith-Waterman score: 1231; 37.3% identity (67.9% similar) in 585 aa overlap (192-764:37-607)
170 180 190 200 210 220
pF1KB4 RYMAENPTAGVVQEEEEDNLEYDSDGNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNEH
: .:.. .: . : ::::::.::
NP_001 DRDRGRDRGFGAPRFGGSRAGPLSGKKFGNPGEKLVKKKWNLD----ELPKFEKNFYQEH
10 20 30 40 50 60
230 240 250 260 270 280
pF1KB4 EEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQC
... : :.. :.. .. : : :.: .: . .: ..: : ....:.:: ::
NP_001 PDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQA
70 80 90 100 110 120
290 300 310 320 330 340
pF1KB4 QGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQ
:: :::::: ::.:.:.:::::: ... : ..:: : :: ::::: ... ::::: ::
NP_001 QGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQ
130 140 150 160 170 180
350 360 370 380 390 400
pF1KB4 IHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRV
.. .. .: :.:. .:::. : . :..:.:: . ::::::: .. :::.:.
NP_001 VQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRT
190 200 210 220 230 240
410 420 430 440 450 460
pF1KB4 SYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQ
.:::.::::::.::::: :.:.:....:::::::..:::. :....::.:.: : :..
NP_001 TYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINI
250 260 270 280 290 300
470 480 490 500 510
pF1KB4 GDIG-EANEDVTQIVEILHSGPSKWNWLTRRLVEFTSS--GSVLLFVTKKANAEELANNL
: . ::... :::.. :. : . : : . :. : .....:: : .::. ..
NP_001 GALELSANHNILQIVDVCHD-VEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKM
310 320 330 340 350 360
520 530 540 550 560 570
pF1KB4 KQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARD
...: .::: .:.::. :...::. :.:.:::::.::::. ..: ::::: .
NP_001 RRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNS
370 380 390 400 410 420
580 590 600 610 620 630
pF1KB4 IDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWF
. . ::::::.:. . :.:::..::.. . ..::. :. ::: .. .::.: ...
NP_001 SEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQL-VEDRGS
430 440 450 460 470 480
640 650 660 670 680 690
pF1KB4 RKSRFKGG----KGKKLNIG--GGGLGYRERPGLGSENMDRGNNNVMSNYEAYKPSTGAM
.:: .:: . . . : :: .:.: ::.::: ..... . : ..:..
NP_001 GRSRGRGGMKDDRRDRYSAGKRGGFNTFRDR-----ENYDRGYSSLLKRDFGAKTQNGVY
490 500 510 520 530
700 710 720 730 740 750
pF1KB4 GDRLTAMKAAFQSQYKSHFVAASL-SNQKAGSSAAGASGWTSAGSLNSVPTNSAQQGHNS
. . ...: :.. : . .:. ... .:. : .. . :: .::. .....
NP_001 SAA-NYTNGSFGSNFVSAGIQTSFRTGNPTGTYQNGYDSTQQYGS--NVPNMHNGMNQQA
540 550 560 570 580 590
760 770 780 790 800
pF1KB4 PDSPVTSAAK--GIPGFGNTGNISGAPVTYPSAGAQGVNNTASGNNSREGTGGSNGKRER
:.:.:: : :
NP_001 YAYPATAAAPMIGYPMPTGYSQ
600 610
938 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 14:25:17 2016 done: Thu Nov 3 14:25:20 2016
Total Scan time: 14.780 Total Display time: 0.300
Function used was FASTA [36.3.4 Apr, 2011]