Result of FASTA (ccds) for
pF1KB4123
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB4123, 468 aa
1>>>pF1KB4123 468 - 468 aa - 468 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.7558+/-0.00111; mu= 10.5363+/- 0.066
mean_var=115.8277+/-25.453, 0's: 0 Z-trim(105.8): 207 B-trim: 0 in 0/48
Lambda= 0.119170
statistics sampled from 8414 (8650) to 8414 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.63), E-opt: 0.2 (0.266), width: 16
Scan time: 2.840
The best scores are: opt bits E(32554)
CCDS5420.1 CHN2 gene_id:1124|Hs108|chr7 ( 468) 3145 552.2 4.1e-157
CCDS46455.1 CHN1 gene_id:1123|Hs108|chr2 ( 459) 2319 410.2 2.3e-114
CCDS47566.1 CHN2 gene_id:1124|Hs108|chr7 ( 332) 1885 335.5 5e-92
CCDS56147.1 CHN1 gene_id:1123|Hs108|chr2 ( 334) 1503 269.8 3e-72
CCDS46454.1 CHN1 gene_id:1123|Hs108|chr2 ( 433) 1409 253.8 2.7e-67
CCDS78219.1 CHN2 gene_id:1124|Hs108|chr7 ( 274) 1065 194.5 1.2e-49
CCDS78217.1 CHN2 gene_id:1124|Hs108|chr7 ( 197) 994 182.2 4.3e-46
CCDS78218.1 CHN2 gene_id:1124|Hs108|chr7 ( 260) 824 153.0 3.4e-37
CCDS78220.1 CHN2 gene_id:1124|Hs108|chr7 ( 228) 589 112.6 4.4e-25
CCDS46010.1 MYO9B gene_id:4650|Hs108|chr19 (2022) 463 91.5 8.5e-18
CCDS10239.1 MYO9A gene_id:4649|Hs108|chr15 (2548) 458 90.8 1.9e-17
CCDS11498.1 ARHGAP27 gene_id:201176|Hs108|chr17 ( 548) 443 87.7 3.2e-17
CCDS2184.1 ARHGAP15 gene_id:55843|Hs108|chr2 ( 475) 442 87.5 3.2e-17
CCDS74082.1 ARHGAP27 gene_id:201176|Hs108|chr17 ( 889) 443 87.9 4.8e-17
CCDS7144.2 ARHGAP21 gene_id:57584|Hs108|chr10 (1958) 446 88.6 6.3e-17
CCDS34075.1 ARHGAP10 gene_id:79658|Hs108|chr4 ( 786) 436 86.6 9.9e-17
CCDS56027.1 ARHGAP23 gene_id:57636|Hs108|chr17 (1491) 437 87.0 1.5e-16
CCDS54254.1 ARHGAP33 gene_id:115703|Hs108|chr19 (1123) 432 86.1 2.1e-16
CCDS12477.1 ARHGAP33 gene_id:115703|Hs108|chr19 (1126) 432 86.1 2.1e-16
CCDS59214.1 ARHGAP12 gene_id:94134|Hs108|chr10 ( 794) 429 85.4 2.3e-16
CCDS73082.1 ARHGAP12 gene_id:94134|Hs108|chr10 ( 799) 429 85.4 2.3e-16
CCDS59215.1 ARHGAP12 gene_id:94134|Hs108|chr10 ( 816) 429 85.4 2.4e-16
CCDS59216.1 ARHGAP12 gene_id:94134|Hs108|chr10 ( 841) 429 85.5 2.4e-16
CCDS7170.1 ARHGAP12 gene_id:94134|Hs108|chr10 ( 846) 429 85.5 2.4e-16
CCDS47297.1 ARHGAP26 gene_id:23092|Hs108|chr5 ( 759) 423 84.4 4.6e-16
CCDS4277.1 ARHGAP26 gene_id:23092|Hs108|chr5 ( 814) 423 84.4 4.8e-16
CCDS46127.1 ARHGAP35 gene_id:2909|Hs108|chr19 (1499) 427 85.3 4.9e-16
CCDS8795.1 RACGAP1 gene_id:29127|Hs108|chr12 ( 632) 421 84.0 5e-16
CCDS45095.1 ARHGAP5 gene_id:394|Hs108|chr14 (1501) 422 84.4 8.9e-16
CCDS32062.1 ARHGAP5 gene_id:394|Hs108|chr14 (1502) 422 84.4 8.9e-16
CCDS14388.1 OPHN1 gene_id:4983|Hs108|chrX ( 802) 410 82.2 2.2e-15
CCDS31718.1 ARHGAP32 gene_id:9743|Hs108|chr11 (1738) 401 80.8 1.2e-14
CCDS44769.1 ARHGAP32 gene_id:9743|Hs108|chr11 (2087) 401 80.9 1.4e-14
CCDS8967.1 SRGAP1 gene_id:57522|Hs108|chr12 (1085) 396 79.9 1.5e-14
CCDS58497.1 ABR gene_id:29|Hs108|chr17 ( 310) 383 77.3 2.6e-14
CCDS13807.1 BCR gene_id:613|Hs108|chr22 (1227) 388 78.5 4.3e-14
CCDS73936.1 ABR gene_id:29|Hs108|chr17 ( 641) 383 77.5 4.7e-14
CCDS43135.1 ARHGAP31 gene_id:57514|Hs108|chr3 (1444) 388 78.6 4.9e-14
CCDS13806.1 BCR gene_id:613|Hs108|chr22 (1271) 387 78.3 5e-14
CCDS54060.1 ABR gene_id:29|Hs108|chr17 ( 813) 383 77.5 5.7e-14
CCDS11000.1 ABR gene_id:29|Hs108|chr17 ( 822) 383 77.5 5.7e-14
CCDS10999.1 ABR gene_id:29|Hs108|chr17 ( 859) 383 77.6 5.9e-14
CCDS2572.1 SRGAP3 gene_id:9901|Hs108|chr3 (1099) 379 76.9 1.2e-13
CCDS1215.1 ARHGAP30 gene_id:257106|Hs108|chr1 ( 890) 372 75.7 2.3e-13
CCDS30918.1 ARHGAP30 gene_id:257106|Hs108|chr1 (1101) 372 75.7 2.7e-13
CCDS76261.1 SRGAP2 gene_id:23380|Hs108|chr1 ( 789) 369 75.1 2.9e-13
CCDS14736.1 ARHGAP4 gene_id:393|Hs108|chrX ( 946) 369 75.2 3.4e-13
CCDS55540.1 ARHGAP4 gene_id:393|Hs108|chrX ( 986) 369 75.2 3.5e-13
CCDS76262.1 SRGAP2 gene_id:23380|Hs108|chr1 (1070) 369 75.2 3.7e-13
CCDS73017.1 SRGAP2 gene_id:23380|Hs108|chr1 (1071) 369 75.2 3.7e-13
>>CCDS5420.1 CHN2 gene_id:1124|Hs108|chr7 (468 aa)
initn: 3145 init1: 3145 opt: 3145 Z-score: 2934.2 bits: 552.2 E(32554): 4.1e-157
Smith-Waterman score: 3145; 100.0% identity (100.0% similar) in 468 aa overlap (1-468:1-468)
10 20 30 40 50 60
pF1KB4 MAASSNSSLSGSSVSSDAEEYQPPIWKSYLYQLQQEAPRPKRIICPREVENRPKYYGREF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 MAASSNSSLSGSSVSSDAEEYQPPIWKSYLYQLQQEAPRPKRIICPREVENRPKYYGREF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 HGIISREQADELLGGVEGAYILRESQRQPGCYTLALRFGNQTLNYRLFHDGKHFVGEKRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 HGIISREQADELLGGVEGAYILRESQRQPGCYTLALRFGNQTLNYRLFHDGKHFVGEKRF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 ESIHDLVTDGLITLYIETKAAEYISKMTTNPIYEHIGYATLLREKVSRRLSRSKNEPRKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 ESIHDLVTDGLITLYIETKAAEYISKMTTNPIYEHIGYATLLREKVSRRLSRSKNEPRKT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 NVTHEEHTAVEKISSLVRRAALTHNDNHFNYEKTHNFKVHTFRGPHWCEYCANFMWGLIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 NVTHEEHTAVEKISSLVRRAALTHNDNHFNYEKTHNFKVHTFRGPHWCEYCANFMWGLIA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 QGVRCSDCGLNVHKQCSKHVPNDCQPDLKRIKKVYCCDLTTLVKAHNTQRPMVVDICIRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 QGVRCSDCGLNVHKQCSKHVPNDCQPDLKRIKKVYCCDLTTLVKAHNTQRPMVVDICIRE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 IEARGLKSEGLYRVSGFTEHIEDVKMAFDRDGEKADISANVYPDINIITGALKLYFRDLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 IEARGLKSEGLYRVSGFTEHIEDVKMAFDRDGEKADISANVYPDINIITGALKLYFRDLP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB4 IPVITYDTYSKFIDAAKISNADERLEAVHEVLMLLPPAHYETLRYLMIHLKKVTMNEKDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 IPVITYDTYSKFIDAAKISNADERLEAVHEVLMLLPPAHYETLRYLMIHLKKVTMNEKDN
370 380 390 400 410 420
430 440 450 460
pF1KB4 FMNAENLGIVFGPTLMRPPEDSTLTTLHDMRYQKLIVQILIENEDVLF
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 FMNAENLGIVFGPTLMRPPEDSTLTTLHDMRYQKLIVQILIENEDVLF
430 440 450 460
>>CCDS46455.1 CHN1 gene_id:1123|Hs108|chr2 (459 aa)
initn: 2320 init1: 1505 opt: 2319 Z-score: 2166.8 bits: 410.2 E(32554): 2.3e-114
Smith-Waterman score: 2319; 73.5% identity (91.2% similar) in 453 aa overlap (17-468:7-459)
10 20 30 40 50 60
pF1KB4 MAASSNSSLSGSSVSSDAEEYQPPIWKSYLYQLQQEAPRPKRIICPREVENRPKYYGREF
:..::.::.:::::::::::::.:.:: : :::::::::::::
CCDS46 MALTLFDTDEYRPPVWKSYLYQLQQEAPHPRRITCTCEVENRPKYYGREF
10 20 30 40 50
70 80 90 100 110 120
pF1KB4 HGIISREQADELLGGVEGAYILRESQRQPGCYTLALRFGNQTLNYRLFHDGKHFVGEKRF
::.:::: ::.:: .::.:..:::::::: ::::::::.:: :.::..:::::::::::
CCDS46 HGMISREAADQLLIVAEGSYLIRESQRQPGTYTLALRFGSQTRNFRLYYDGKHFVGEKRF
60 70 80 90 100 110
130 140 150 160 170
pF1KB4 ESIHDLVTDGLITLYIETKAAEYISKMTTNPIYEHIGYATLLREKVSRR-LSRSKNEPRK
::::::::::::::::::::::::.::: ::::::.::.:: :: . .. . :. .
CCDS46 ESIHDLVTDGLITLYIETKAAEYIAKMTINPIYEHVGYTTLNREPAYKKHMPVLKETHDE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB4 TNVTHEEHTAVEKISSLVRRAALTHNDNHFNYEKTHNFKVHTFRGPHWCEYCANFMWGLI
. : .. .. ....::::::.: .:.. .::: :::::::::::::::::::::::::
CCDS46 RDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVHTFRGPHWCEYCANFMWGLI
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB4 AQGVRCSDCGLNVHKQCSKHVPNDCQPDLKRIKKVYCCDLTTLVKAHNTQRPMVVDICIR
::::.:.:::::::::::: :::::.::::..:::: ::::::::::.:.::::::.:::
CCDS46 AQGVKCADCGLNVHKQCSKMVPNDCKPDLKHVKKVYSCDLTTLVKAHTTKRPMVVDMCIR
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB4 EIEARGLKSEGLYRVSGFTEHIEDVKMAFDRDGEKADISANVYPDINIITGALKLYFRDL
:::.:::.::::::::::.. ::::::::::::::::::.:.: ::::::::::::::::
CCDS46 EIESRGLNSEGLYRVSGFSDLIEDVKMAFDRDGEKADISVNMYEDINIITGALKLYFRDL
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB4 PIPVITYDTYSKFIDAAKISNADERLEAVHEVLMLLPPAHYETLRYLMIHLKKVTMNEKD
:::.::::.: :::..::: . ::.::..::.: :::::: ::::::: :::.::..::.
CCDS46 PIPLITYDAYPKFIESAKIMDPDEQLETLHEALKLLPPAHCETLRYLMAHLKRVTLHEKE
360 370 380 390 400 410
420 430 440 450 460
pF1KB4 NFMNAENLGIVFGPTLMRPPEDSTLTTLHDMRYQKLIVQILIENEDVLF
:.:::::::::::::::: :: .....:.:.:::.:.:..::.:::.::
CCDS46 NLMNAENLGIVFGPTLMRSPELDAMAALNDIRYQRLVVELLIKNEDILF
420 430 440 450
>>CCDS47566.1 CHN2 gene_id:1124|Hs108|chr7 (332 aa)
initn: 1885 init1: 1885 opt: 1885 Z-score: 1765.6 bits: 335.5 E(32554): 5e-92
Smith-Waterman score: 1885; 98.9% identity (99.3% similar) in 280 aa overlap (189-468:53-332)
160 170 180 190 200 210
pF1KB4 ATLLREKVSRRLSRSKNEPRKTNVTHEEHTAVEKISSLVRRAALTHNDNHFNYEKTHNFK
: .::::::::::::::::::::::::::
CCDS47 GRKRQELLAVAFGVKVGVKGGFLWPPLKLFACSQISSLVRRAALTHNDNHFNYEKTHNFK
30 40 50 60 70 80
220 230 240 250 260 270
pF1KB4 VHTFRGPHWCEYCANFMWGLIAQGVRCSDCGLNVHKQCSKHVPNDCQPDLKRIKKVYCCD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VHTFRGPHWCEYCANFMWGLIAQGVRCSDCGLNVHKQCSKHVPNDCQPDLKRIKKVYCCD
90 100 110 120 130 140
280 290 300 310 320 330
pF1KB4 LTTLVKAHNTQRPMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRDGEKADIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LTTLVKAHNTQRPMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRDGEKADIS
150 160 170 180 190 200
340 350 360 370 380 390
pF1KB4 ANVYPDINIITGALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEVLMLLPPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ANVYPDINIITGALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEVLMLLPPA
210 220 230 240 250 260
400 410 420 430 440 450
pF1KB4 HYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLMRPPEDSTLTTLHDMRYQKLIVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 HYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLMRPPEDSTLTTLHDMRYQKLIVQ
270 280 290 300 310 320
460
pF1KB4 ILIENEDVLF
::::::::::
CCDS47 ILIENEDVLF
330
>>CCDS56147.1 CHN1 gene_id:1123|Hs108|chr2 (334 aa)
initn: 1503 init1: 1503 opt: 1503 Z-score: 1410.6 bits: 269.8 E(32554): 3e-72
Smith-Waterman score: 1503; 76.1% identity (93.6% similar) in 280 aa overlap (189-468:55-334)
160 170 180 190 200 210
pF1KB4 ATLLREKVSRRLSRSKNEPRKTNVTHEEHTAVEKISSLVRRAALTHNDNHFNYEKTHNFK
: ...::::::.: .:.. .::: ::::
CCDS56 RQQDLLIAALGMKLGSPKSSVTIWQPLKLFAYSQLTSLVRRATLKENEQIPKYEKIHNFK
30 40 50 60 70 80
220 230 240 250 260 270
pF1KB4 VHTFRGPHWCEYCANFMWGLIAQGVRCSDCGLNVHKQCSKHVPNDCQPDLKRIKKVYCCD
:::::::::::::::::::::::::.:.:::::::::::: :::::.::::..:::: ::
CCDS56 VHTFRGPHWCEYCANFMWGLIAQGVKCADCGLNVHKQCSKMVPNDCKPDLKHVKKVYSCD
90 100 110 120 130 140
280 290 300 310 320 330
pF1KB4 LTTLVKAHNTQRPMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRDGEKADIS
::::::::.:.::::::.::::::.:::.::::::::::.. ::::::::::::::::::
CCDS56 LTTLVKAHTTKRPMVVDMCIREIESRGLNSEGLYRVSGFSDLIEDVKMAFDRDGEKADIS
150 160 170 180 190 200
340 350 360 370 380 390
pF1KB4 ANVYPDINIITGALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEVLMLLPPA
.:.: :::::::::::::::::::.::::.: :::..::: . ::.::..::.: :::::
CCDS56 VNMYEDINIITGALKLYFRDLPIPLITYDAYPKFIESAKIMDPDEQLETLHEALKLLPPA
210 220 230 240 250 260
400 410 420 430 440 450
pF1KB4 HYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLMRPPEDSTLTTLHDMRYQKLIVQ
: ::::::: :::.::..::.:.:::::::::::::::: :: .....:.:.:::.:.:.
CCDS56 HCETLRYLMAHLKRVTLHEKENLMNAENLGIVFGPTLMRSPELDAMAALNDIRYQRLVVE
270 280 290 300 310 320
460
pF1KB4 ILIENEDVLF
.::.:::.::
CCDS56 LLIKNEDILF
330
>>CCDS46454.1 CHN1 gene_id:1123|Hs108|chr2 (433 aa)
initn: 2223 init1: 1408 opt: 1409 Z-score: 1321.6 bits: 253.8 E(32554): 2.7e-67
Smith-Waterman score: 2185; 72.3% identity (87.4% similar) in 452 aa overlap (17-468:7-433)
10 20 30 40 50 60
pF1KB4 MAASSNSSLSGSSVSSDAEEYQPPIWKSYLYQLQQEAPRPKRIICPREVENRPKYYGREF
:..::.::.:::::::::::::.:.:: : :::::::::::::
CCDS46 MALTLFDTDEYRPPVWKSYLYQLQQEAPHPRRITCTCEVENRPKYYGREF
10 20 30 40 50
70 80 90 100 110 120
pF1KB4 HGIISREQADELLGGVEGAYILRESQRQPGCYTLALRFGNQTLNYRLFHDGKHFVGEKRF
::.:::: ::.:: .::.:..:::::::: ::::::::.:: :.::..:::::::::::
CCDS46 HGMISREAADQLLIVAEGSYLIRESQRQPGTYTLALRFGSQTRNFRLYYDGKHFVGEKRF
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB4 ESIHDLVTDGLITLYIETKAAEYISKMTTNPIYEHIGYATLLREKVSRRLSRSKNEPRKT
::::::::::::::::::::::::.::: ::::::.::.:: :: . . :. :
CCDS46 ESIHDLVTDGLITLYIETKAAEYIAKMTINPIYEHVGYTTLNREPAYK-----KHMP---
120 130 140 150 160
190 200 210 220 230 240
pF1KB4 NVTHEEHTAVEKISSLVRRAALTHNDNHFNYEKTHNFKVHTFRGPHWCEYCANFMWGLIA
: .: : :. : : .:. :: .::::::::::::::::::::::
CCDS46 -VLKETHD--ERDS--------TGQDG--VSEK----RVHTFRGPHWCEYCANFMWGLIA
170 180 190 200
250 260 270 280 290 300
pF1KB4 QGVRCSDCGLNVHKQCSKHVPNDCQPDLKRIKKVYCCDLTTLVKAHNTQRPMVVDICIRE
:::.:.:::::::::::: :::::.::::..:::: ::::::::::.:.::::::.::::
CCDS46 QGVKCADCGLNVHKQCSKMVPNDCKPDLKHVKKVYSCDLTTLVKAHTTKRPMVVDMCIRE
210 220 230 240 250 260
310 320 330 340 350 360
pF1KB4 IEARGLKSEGLYRVSGFTEHIEDVKMAFDRDGEKADISANVYPDINIITGALKLYFRDLP
::.:::.::::::::::.. ::::::::::::::::::.:.: :::::::::::::::::
CCDS46 IESRGLNSEGLYRVSGFSDLIEDVKMAFDRDGEKADISVNMYEDINIITGALKLYFRDLP
270 280 290 300 310 320
370 380 390 400 410 420
pF1KB4 IPVITYDTYSKFIDAAKISNADERLEAVHEVLMLLPPAHYETLRYLMIHLKKVTMNEKDN
::.::::.: :::..::: . ::.::..::.: :::::: ::::::: :::.::..::.:
CCDS46 IPLITYDAYPKFIESAKIMDPDEQLETLHEALKLLPPAHCETLRYLMAHLKRVTLHEKEN
330 340 350 360 370 380
430 440 450 460
pF1KB4 FMNAENLGIVFGPTLMRPPEDSTLTTLHDMRYQKLIVQILIENEDVLF
.:::::::::::::::: :: .....:.:.:::.:.:..::.:::.::
CCDS46 LMNAENLGIVFGPTLMRSPELDAMAALNDIRYQRLVVELLIKNEDILF
390 400 410 420 430
>>CCDS78219.1 CHN2 gene_id:1124|Hs108|chr7 (274 aa)
initn: 1063 init1: 1063 opt: 1065 Z-score: 1004.9 bits: 194.5 E(32554): 1.2e-49
Smith-Waterman score: 1340; 78.2% identity (78.6% similar) in 280 aa overlap (189-468:53-274)
160 170 180 190 200 210
pF1KB4 ATLLREKVSRRLSRSKNEPRKTNVTHEEHTAVEKISSLVRRAALTHNDNHFNYEKTHNFK
: .::::::::::::::::::::::::::
CCDS78 GRKRQELLAVAFGVKVGVKGGFLWPPLKLFACSQISSLVRRAALTHNDNHFNYEKTHNFK
30 40 50 60 70 80
220 230 240 250 260 270
pF1KB4 VHTFRGPHWCEYCANFMWGLIAQGVRCSDCGLNVHKQCSKHVPNDCQPDLKRIKKVYCCD
::::::::::::::::::::::::::::
CCDS78 VHTFRGPHWCEYCANFMWGLIAQGVRCS--------------------------------
90 100 110
280 290 300 310 320 330
pF1KB4 LTTLVKAHNTQRPMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRDGEKADIS
::::::::::::::::::::::::::::::::::
CCDS78 --------------------------GLKSEGLYRVSGFTEHIEDVKMAFDRDGEKADIS
120 130 140
340 350 360 370 380 390
pF1KB4 ANVYPDINIITGALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEVLMLLPPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 ANVYPDINIITGALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEVLMLLPPA
150 160 170 180 190 200
400 410 420 430 440 450
pF1KB4 HYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLMRPPEDSTLTTLHDMRYQKLIVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 HYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLMRPPEDSTLTTLHDMRYQKLIVQ
210 220 230 240 250 260
460
pF1KB4 ILIENEDVLF
::::::::::
CCDS78 ILIENEDVLF
270
>>CCDS78217.1 CHN2 gene_id:1124|Hs108|chr7 (197 aa)
initn: 994 init1: 994 opt: 994 Z-score: 941.0 bits: 182.2 E(32554): 4.3e-46
Smith-Waterman score: 994; 97.9% identity (98.6% similar) in 142 aa overlap (189-330:53-194)
160 170 180 190 200 210
pF1KB4 ATLLREKVSRRLSRSKNEPRKTNVTHEEHTAVEKISSLVRRAALTHNDNHFNYEKTHNFK
: .::::::::::::::::::::::::::
CCDS78 GRKRQELLAVAFGVKVGVKGGFLWPPLKLFACSQISSLVRRAALTHNDNHFNYEKTHNFK
30 40 50 60 70 80
220 230 240 250 260 270
pF1KB4 VHTFRGPHWCEYCANFMWGLIAQGVRCSDCGLNVHKQCSKHVPNDCQPDLKRIKKVYCCD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 VHTFRGPHWCEYCANFMWGLIAQGVRCSDCGLNVHKQCSKHVPNDCQPDLKRIKKVYCCD
90 100 110 120 130 140
280 290 300 310 320 330
pF1KB4 LTTLVKAHNTQRPMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRDGEKADIS
::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 LTTLVKAHNTQRPMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRGLL
150 160 170 180 190
340 350 360 370 380 390
pF1KB4 ANVYPDINIITGALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEVLMLLPPA
>>CCDS78218.1 CHN2 gene_id:1124|Hs108|chr7 (260 aa)
initn: 824 init1: 824 opt: 824 Z-score: 781.3 bits: 153.0 E(32554): 3.4e-37
Smith-Waterman score: 1259; 72.9% identity (73.6% similar) in 280 aa overlap (189-468:53-260)
160 170 180 190 200 210
pF1KB4 ATLLREKVSRRLSRSKNEPRKTNVTHEEHTAVEKISSLVRRAALTHNDNHFNYEKTHNFK
: .::::::::::::::::::::::::::
CCDS78 GRKRQELLAVAFGVKVGVKGGFLWPPLKLFACSQISSLVRRAALTHNDNHFNYEKTHNFK
30 40 50 60 70 80
220 230 240 250 260 270
pF1KB4 VHTFRGPHWCEYCANFMWGLIAQGVRCSDCGLNVHKQCSKHVPNDCQPDLKRIKKVYCCD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 VHTFRGPHWCEYCANFMWGLIAQGVRCSDCGLNVHKQCSKHVPNDCQPDLKRIKKVYCCD
90 100 110 120 130 140
280 290 300 310 320 330
pF1KB4 LTTLVKAHNTQRPMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRDGEKADIS
::::::::::::::::::::::::::
CCDS78 LTTLVKAHNTQRPMVVDICIREIEAR----------------------------------
150 160
340 350 360 370 380 390
pF1KB4 ANVYPDINIITGALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEVLMLLPPA
.:::::::::::::::::::::
CCDS78 --------------------------------------EISNADERLEAVHEVLMLLPPA
170 180 190
400 410 420 430 440 450
pF1KB4 HYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLMRPPEDSTLTTLHDMRYQKLIVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 HYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLMRPPEDSTLTTLHDMRYQKLIVQ
200 210 220 230 240 250
460
pF1KB4 ILIENEDVLF
::::::::::
CCDS78 ILIENEDVLF
260
>>CCDS78220.1 CHN2 gene_id:1124|Hs108|chr7 (228 aa)
initn: 980 init1: 589 opt: 589 Z-score: 563.7 bits: 112.6 E(32554): 4.4e-25
Smith-Waterman score: 937; 61.4% identity (62.1% similar) in 280 aa overlap (189-468:53-228)
160 170 180 190 200 210
pF1KB4 ATLLREKVSRRLSRSKNEPRKTNVTHEEHTAVEKISSLVRRAALTHNDNHFNYEKTHNFK
: .::::::::::::::::::::::::::
CCDS78 GRKRQELLAVAFGVKVGVKGGFLWPPLKLFACSQISSLVRRAALTHNDNHFNYEKTHNFK
30 40 50 60 70 80
220 230 240 250 260 270
pF1KB4 VHTFRGPHWCEYCANFMWGLIAQGVRCSDCGLNVHKQCSKHVPNDCQPDLKRIKKVYCCD
::::::::::::::::::::::::::::
CCDS78 VHTFRGPHWCEYCANFMWGLIAQGVRCS--------------------------------
90 100 110
280 290 300 310 320 330
pF1KB4 LTTLVKAHNTQRPMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRDGEKADIS
::::::::::::::::::::::::::.
CCDS78 --------------------------GLKSEGLYRVSGFTEHIEDVKMAFDRE-------
120 130
340 350 360 370 380 390
pF1KB4 ANVYPDINIITGALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEVLMLLPPA
:::::::::::::::::::::
CCDS78 ---------------------------------------ISNADERLEAVHEVLMLLPPA
140 150
400 410 420 430 440 450
pF1KB4 HYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLMRPPEDSTLTTLHDMRYQKLIVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 HYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLMRPPEDSTLTTLHDMRYQKLIVQ
160 170 180 190 200 210
460
pF1KB4 ILIENEDVLF
::::::::::
CCDS78 ILIENEDVLF
220
>>CCDS46010.1 MYO9B gene_id:4650|Hs108|chr19 (2022 aa)
initn: 248 init1: 179 opt: 463 Z-score: 433.0 bits: 91.5 E(32554): 8.5e-18
Smith-Waterman score: 471; 29.1% identity (59.9% similar) in 364 aa overlap (110-464:1555-1884)
80 90 100 110 120 130
pF1KB4 YILRESQRQPGCYTLALRFGNQTLNYRLFHDGKHFVGEKRFESIHDLVTDGLITLYIETK
.:: :: : . ...:...:
CCDS46 LRSQKTPIESLFIEATEKFRSNIKTMYSVPNGKIHVGYKDLMENYQIVVSNL--------
1530 1540 1550 1560 1570
140 150 160 170 180 190
pF1KB4 AAEYISKMTTNPIYEHIGYATLLREKVSRRLSRSKNEPRKTNVTHEEHTAVEKISSLVRR
:.: .: :: . . . .:: : .: ... :: : . ..... : :
CCDS46 ATERGQK-DTNLVLNL--FQSLLDE-FTRGYTKNDFEPVKQSKAQKKKRKQE-------R
1580 1590 1600 1610 1620
200 210 220 230 240 250
pF1KB4 AALTHNDNHFNYEKTHNFKVHTFRGPHWCEYCANFMWGLIAQGVRCSDCGLNVHKQCSKH
:. :: : : . :. :: : ...: :. ... :: : .. ::.: ..
CCDS46 AVQEHNG--------HVFASYQVSIPQSCEQCLSYIW-LMDKALLCSVCKMTCHKKCVHK
1630 1640 1650 1660 1670
260 270 280 290 300 310
pF1KB4 VPNDC--------QPDLKRIKKVYCCDLTTLVKAHNTQRPMVVDICIREIEARGLKSEGL
. . : .: .. . : : : :: . :.:.. ....: .:: .:::
CCDS46 IQSHCSYTYGRKGEPGVEPGHFGVCVDSLTSDKA---SVPIVLEKLLEHVEMHGLYTEGL
1680 1690 1700 1710 1720 1730
320 330 340 350 360 370
pF1KB4 YRVSGFTEHIEDVKMAFDRDGEKADISANVYPDINIITGALKLYFRDLPIPVITYDTYSK
:: :: ... .....:.. : : .. . .: :. :::.:: ..:.:: :..:. :.
CCDS46 YRKSGAANRTRELRQALQTD--PAAVKLENFP-IHAITGVLKQWLRELPEPLMTFAQYGD
1740 1750 1760 1770 1780 1790
380 390 400 410 420 430
pF1KB4 FIDAAKISNADERLEAVHEVLMLLPPAHYETLRYLMIHLKKVTMNEKDNFMNAENLGIVF
:. :... . .:.: :.. :: :: :....:. :..:: ::.. : : :. :.:.:
CCDS46 FLRAVELPEKQEQLAAIYAVLEHLPEANHNSLERLIFHLVKVALLEDVNRMSPGALAIIF
1800 1810 1820 1830 1840 1850
440 450 460
pF1KB4 GPTLMRPPEDST-LTTLHDMRYQKLIVQILIENEDVLF
.: :.: :..: ::...:. :..::...
CCDS46 APCLLRCPDNSDPLTSMKDVLKITTCVEMLIKEQMRKYKVKMEEISQLEAAESIAFRRLS
1860 1870 1880 1890 1900 1910
CCDS46 LLRQNAPWPLKLGFSSPYEGVLNKSPKTRDIQEEELEVLLEEEAAGGDEDREKEILIERI
1920 1930 1940 1950 1960 1970
468 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 05:39:21 2016 done: Sat Nov 5 05:39:22 2016
Total Scan time: 2.840 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]