Result of FASTA (omim) for
pF1KB4278
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB4278, 344 aa
1>>>pF1KB4278 344 - 344 aa - 344 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2875+/-0.000359; mu= 16.3612+/- 0.022
mean_var=66.6445+/-13.220, 0's: 0 Z-trim(113.5): 31 B-trim: 0 in 0/50
Lambda= 0.157106
statistics sampled from 22879 (22910) to 22879 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.647), E-opt: 0.2 (0.269), width: 16
Scan time: 8.230
The best scores are: opt bits E(85289)
XP_011530701 (OMIM: 603203) PREDICTED: cyclin-G2 i ( 344) 2294 528.8 6.5e-150
NP_004345 (OMIM: 603203) cyclin-G2 [Homo sapiens] ( 344) 2294 528.8 6.5e-150
XP_011530700 (OMIM: 603203) PREDICTED: cyclin-G2 i ( 344) 2294 528.8 6.5e-150
NP_004051 (OMIM: 601578) cyclin-G1 [Homo sapiens] ( 295) 972 229.1 9.1e-60
NP_954854 (OMIM: 601578) cyclin-G1 [Homo sapiens] ( 295) 972 229.1 9.1e-60
NP_066970 (OMIM: 607752,615872) cyclin-O [Homo sap ( 350) 201 54.4 4.2e-07
XP_011515668 (OMIM: 603775) PREDICTED: G1/S-specif ( 288) 180 49.6 9.7e-06
NP_477097 (OMIM: 603775) G1/S-specific cyclin-E2 [ ( 404) 180 49.7 1.3e-05
XP_016869446 (OMIM: 603775) PREDICTED: G1/S-specif ( 404) 180 49.7 1.3e-05
XP_016869448 (OMIM: 603775) PREDICTED: G1/S-specif ( 404) 180 49.7 1.3e-05
XP_016869447 (OMIM: 603775) PREDICTED: G1/S-specif ( 404) 180 49.7 1.3e-05
NP_004692 (OMIM: 602755) G2/mitotic-specific cycli ( 398) 177 49.0 2e-05
XP_011533597 (OMIM: 604036) PREDICTED: cyclin-A1 i ( 421) 177 49.0 2.1e-05
NP_001104517 (OMIM: 604036) cyclin-A1 isoform c [H ( 421) 177 49.0 2.1e-05
XP_011533596 (OMIM: 604036) PREDICTED: cyclin-A1 i ( 421) 177 49.0 2.1e-05
NP_001104516 (OMIM: 604036) cyclin-A1 isoform c [H ( 421) 177 49.0 2.1e-05
XP_011533598 (OMIM: 604036) PREDICTED: cyclin-A1 i ( 421) 177 49.0 2.1e-05
NP_001104515 (OMIM: 604036) cyclin-A1 isoform b [H ( 464) 177 49.1 2.3e-05
NP_003905 (OMIM: 604036) cyclin-A1 isoform a [Homo ( 465) 177 49.1 2.3e-05
NP_001228 (OMIM: 123835) cyclin-A2 [Homo sapiens] ( 432) 174 48.4 3.5e-05
NP_001309191 (OMIM: 123837) G1/S-specific cyclin-E ( 395) 166 46.5 0.00011
XP_011525742 (OMIM: 123837) PREDICTED: G1/S-specif ( 407) 166 46.5 0.00012
NP_001229 (OMIM: 123837) G1/S-specific cyclin-E1 i ( 410) 166 46.5 0.00012
NP_001750 (OMIM: 123833,615938) G1/S-specific cycl ( 289) 163 45.8 0.00014
NP_001751 (OMIM: 123834) G1/S-specific cyclin-D3 i ( 292) 158 44.6 0.00031
NP_444284 (OMIM: 168461,193300,254500) G1/S-specif ( 295) 149 42.6 0.0013
NP_001274356 (OMIM: 123834) G1/S-specific cyclin-D ( 242) 144 41.4 0.0024
>>XP_011530701 (OMIM: 603203) PREDICTED: cyclin-G2 isofo (344 aa)
initn: 2294 init1: 2294 opt: 2294 Z-score: 2812.4 bits: 528.8 E(85289): 6.5e-150
Smith-Waterman score: 2294; 100.0% identity (100.0% similar) in 344 aa overlap (1-344:1-344)
10 20 30 40 50 60
pF1KB4 MKDLGAEHLAGHEGVQLLGLLNVYLEQEERFQPREKGLSLIEATPENDNTLCPGLRNAKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKDLGAEHLAGHEGVQLLGLLNVYLEQEERFQPREKGLSLIEATPENDNTLCPGLRNAKV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 EDLRSLANFFGSCTETFVLAVNILDRFLALMKVKPKHLSCIGVCSFLLAARIVEEDCNIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EDLRSLANFFGSCTETFVLAVNILDRFLALMKVKPKHLSCIGVCSFLLAARIVEEDCNIP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 STHDVIRISQCKCTASDIKRMEKIISEKLHYELEATTALNFLHLYHTIILCHTSERKEIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 STHDVIRISQCKCTASDIKRMEKIISEKLHYELEATTALNFLHLYHTIILCHTSERKEIL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 SLDKLEAQLKACNCRLIFSKAKPSVLALCLLNLEVETLKSVELLEILLLVKKHSKINDTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SLDKLEAQLKACNCRLIFSKAKPSVLALCLLNLEVETLKSVELLEILLLVKKHSKINDTE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 FFYWRELVSKCLAEYSSPECCKPDLKKLVWIVSRRTAQNLHNSYYSVPELPTIPEGGCFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FFYWRELVSKCLAEYSSPECCKPDLKKLVWIVSRRTAQNLHNSYYSVPELPTIPEGGCFD
250 260 270 280 290 300
310 320 330 340
pF1KB4 ESESEDSCEDMSCGEESLSSSPPSDQECTFFFNFKVAQTLCFPS
::::::::::::::::::::::::::::::::::::::::::::
XP_011 ESESEDSCEDMSCGEESLSSSPPSDQECTFFFNFKVAQTLCFPS
310 320 330 340
>>NP_004345 (OMIM: 603203) cyclin-G2 [Homo sapiens] (344 aa)
initn: 2294 init1: 2294 opt: 2294 Z-score: 2812.4 bits: 528.8 E(85289): 6.5e-150
Smith-Waterman score: 2294; 100.0% identity (100.0% similar) in 344 aa overlap (1-344:1-344)
10 20 30 40 50 60
pF1KB4 MKDLGAEHLAGHEGVQLLGLLNVYLEQEERFQPREKGLSLIEATPENDNTLCPGLRNAKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MKDLGAEHLAGHEGVQLLGLLNVYLEQEERFQPREKGLSLIEATPENDNTLCPGLRNAKV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 EDLRSLANFFGSCTETFVLAVNILDRFLALMKVKPKHLSCIGVCSFLLAARIVEEDCNIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 EDLRSLANFFGSCTETFVLAVNILDRFLALMKVKPKHLSCIGVCSFLLAARIVEEDCNIP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 STHDVIRISQCKCTASDIKRMEKIISEKLHYELEATTALNFLHLYHTIILCHTSERKEIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 STHDVIRISQCKCTASDIKRMEKIISEKLHYELEATTALNFLHLYHTIILCHTSERKEIL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 SLDKLEAQLKACNCRLIFSKAKPSVLALCLLNLEVETLKSVELLEILLLVKKHSKINDTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 SLDKLEAQLKACNCRLIFSKAKPSVLALCLLNLEVETLKSVELLEILLLVKKHSKINDTE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 FFYWRELVSKCLAEYSSPECCKPDLKKLVWIVSRRTAQNLHNSYYSVPELPTIPEGGCFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 FFYWRELVSKCLAEYSSPECCKPDLKKLVWIVSRRTAQNLHNSYYSVPELPTIPEGGCFD
250 260 270 280 290 300
310 320 330 340
pF1KB4 ESESEDSCEDMSCGEESLSSSPPSDQECTFFFNFKVAQTLCFPS
::::::::::::::::::::::::::::::::::::::::::::
NP_004 ESESEDSCEDMSCGEESLSSSPPSDQECTFFFNFKVAQTLCFPS
310 320 330 340
>>XP_011530700 (OMIM: 603203) PREDICTED: cyclin-G2 isofo (344 aa)
initn: 2294 init1: 2294 opt: 2294 Z-score: 2812.4 bits: 528.8 E(85289): 6.5e-150
Smith-Waterman score: 2294; 100.0% identity (100.0% similar) in 344 aa overlap (1-344:1-344)
10 20 30 40 50 60
pF1KB4 MKDLGAEHLAGHEGVQLLGLLNVYLEQEERFQPREKGLSLIEATPENDNTLCPGLRNAKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKDLGAEHLAGHEGVQLLGLLNVYLEQEERFQPREKGLSLIEATPENDNTLCPGLRNAKV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 EDLRSLANFFGSCTETFVLAVNILDRFLALMKVKPKHLSCIGVCSFLLAARIVEEDCNIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EDLRSLANFFGSCTETFVLAVNILDRFLALMKVKPKHLSCIGVCSFLLAARIVEEDCNIP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 STHDVIRISQCKCTASDIKRMEKIISEKLHYELEATTALNFLHLYHTIILCHTSERKEIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 STHDVIRISQCKCTASDIKRMEKIISEKLHYELEATTALNFLHLYHTIILCHTSERKEIL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 SLDKLEAQLKACNCRLIFSKAKPSVLALCLLNLEVETLKSVELLEILLLVKKHSKINDTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SLDKLEAQLKACNCRLIFSKAKPSVLALCLLNLEVETLKSVELLEILLLVKKHSKINDTE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 FFYWRELVSKCLAEYSSPECCKPDLKKLVWIVSRRTAQNLHNSYYSVPELPTIPEGGCFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FFYWRELVSKCLAEYSSPECCKPDLKKLVWIVSRRTAQNLHNSYYSVPELPTIPEGGCFD
250 260 270 280 290 300
310 320 330 340
pF1KB4 ESESEDSCEDMSCGEESLSSSPPSDQECTFFFNFKVAQTLCFPS
::::::::::::::::::::::::::::::::::::::::::::
XP_011 ESESEDSCEDMSCGEESLSSSPPSDQECTFFFNFKVAQTLCFPS
310 320 330 340
>>NP_004051 (OMIM: 601578) cyclin-G1 [Homo sapiens] (295 aa)
initn: 972 init1: 498 opt: 972 Z-score: 1194.0 bits: 229.1 E(85289): 9.1e-60
Smith-Waterman score: 972; 52.8% identity (79.3% similar) in 290 aa overlap (7-295:3-292)
10 20 30 40 50 60
pF1KB4 MKDLGAEHLAGHEGVQLLGLLNVYLEQEERFQPREKGLSLIEATPENDNTLCPGLRNAKV
: :. .. .:: ::. :::: : ::. :: :::.. .: . ::. .:
NP_004 MIEVLTTTDSQKLLHQLNALLEQESRCQPKVCGLRLIESAHDNGLRMTARLRDFEV
10 20 30 40 50
70 80 90 100 110 120
pF1KB4 EDLRSLANFFGSCTETFVLAVNILDRFLALMKVKPKHLSCIGVCSFLLAARIVEEDCNIP
.:: ::..::: :::: ::::.:::::. :::.::::.:.:. : ::.. .::. :.:
NP_004 KDLLSLTQFFGFDTETFSLAVNLLDRFLSKMKVQPKHLGCVGLSCFYLAVKSIEEERNVP
60 70 80 90 100 110
130 140 150 160 170
pF1KB4 STHDVIRISQCKCTASDIKRMEKIISEKLHYELEATTALNFLHLYHTIILCHTS-ERKEI
. :.::::: . :.::. :::::. ::. ....::::..::.::.... . ::..
NP_004 LATDLIRISQYRFTVSDLMRMEKIVLEKVCWKVKATTAFQFLQLYYSLLQENLPLERRNS
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB4 LSLDKLEAQLKACNCRLIFSKAKPSVLALCLLNLEVETLKSVELLEILLLVKKHSKINDT
.....::::::::.::.:::::::::::: .. ::... : ::: : . ..::::::
NP_004 INFERLEAQLKACHCRIIFSKAKPSVLALSIIALEIQAQKCVELTEGIECLQKHSKINGR
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB4 EFFYWRELVSKCLAEYSSPECCKPDLKKLVWIVSRRTAQNLHNSYYSVPELPTIPEGGCF
.. .:.:::::::.:::: .: ::...:: :::: :::..:..::: . .::::::
NP_004 DLTFWQELVSKCLTEYSSNKCSKPNVQKLKWIVSGRTARQLKHSYYRITHLPTIPEMVP
240 250 260 270 280 290
300 310 320 330 340
pF1KB4 DESESEDSCEDMSCGEESLSSSPPSDQECTFFFNFKVAQTLCFPS
>>NP_954854 (OMIM: 601578) cyclin-G1 [Homo sapiens] (295 aa)
initn: 972 init1: 498 opt: 972 Z-score: 1194.0 bits: 229.1 E(85289): 9.1e-60
Smith-Waterman score: 972; 52.8% identity (79.3% similar) in 290 aa overlap (7-295:3-292)
10 20 30 40 50 60
pF1KB4 MKDLGAEHLAGHEGVQLLGLLNVYLEQEERFQPREKGLSLIEATPENDNTLCPGLRNAKV
: :. .. .:: ::. :::: : ::. :: :::.. .: . ::. .:
NP_954 MIEVLTTTDSQKLLHQLNALLEQESRCQPKVCGLRLIESAHDNGLRMTARLRDFEV
10 20 30 40 50
70 80 90 100 110 120
pF1KB4 EDLRSLANFFGSCTETFVLAVNILDRFLALMKVKPKHLSCIGVCSFLLAARIVEEDCNIP
.:: ::..::: :::: ::::.:::::. :::.::::.:.:. : ::.. .::. :.:
NP_954 KDLLSLTQFFGFDTETFSLAVNLLDRFLSKMKVQPKHLGCVGLSCFYLAVKSIEEERNVP
60 70 80 90 100 110
130 140 150 160 170
pF1KB4 STHDVIRISQCKCTASDIKRMEKIISEKLHYELEATTALNFLHLYHTIILCHTS-ERKEI
. :.::::: . :.::. :::::. ::. ....::::..::.::.... . ::..
NP_954 LATDLIRISQYRFTVSDLMRMEKIVLEKVCWKVKATTAFQFLQLYYSLLQENLPLERRNS
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB4 LSLDKLEAQLKACNCRLIFSKAKPSVLALCLLNLEVETLKSVELLEILLLVKKHSKINDT
.....::::::::.::.:::::::::::: .. ::... : ::: : . ..::::::
NP_954 INFERLEAQLKACHCRIIFSKAKPSVLALSIIALEIQAQKCVELTEGIECLQKHSKINGR
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB4 EFFYWRELVSKCLAEYSSPECCKPDLKKLVWIVSRRTAQNLHNSYYSVPELPTIPEGGCF
.. .:.:::::::.:::: .: ::...:: :::: :::..:..::: . .::::::
NP_954 DLTFWQELVSKCLTEYSSNKCSKPNVQKLKWIVSGRTARQLKHSYYRITHLPTIPEMVP
240 250 260 270 280 290
300 310 320 330 340
pF1KB4 DESESEDSCEDMSCGEESLSSSPPSDQECTFFFNFKVAQTLCFPS
>>NP_066970 (OMIM: 607752,615872) cyclin-O [Homo sapiens (350 aa)
initn: 161 init1: 104 opt: 201 Z-score: 248.5 bits: 54.4 E(85289): 4.2e-07
Smith-Waterman score: 201; 29.4% identity (53.8% similar) in 197 aa overlap (27-219:112-296)
10 20 30 40 50
pF1KB4 MKDLGAEHLAGHEGVQLLGLLNVYLEQEERFQPREKGLSLIEATPENDNTLCPGLR
:: .:.::: ..: :. : :
NP_066 PLPGPAQPVAQLDLQTFRDYGQSCYAFRKAQESHFHPREALARQPQVTAESRCKLLSWL-
90 100 110 120 130 140
60 70 80 90 100 110
pF1KB4 NAKVEDLRSLANFFGSCTETFVLAVNILDRFLALMKVKPKHLSCIGVCSFLLAARIVEED
. :. :: :.. :.:: :::::. : .. .:: :.:.: . ::
NP_066 ---IPVHRQ----FGLSFESLCLTVNTLDRFLTTTPVAADCFQLLGVTSLLIACKQVE--
150 160 170 180 190
120 130 140 150 160 170
pF1KB4 CNIPSTHDVIRISQCKCTASDIKRMEKIISEKLHYELEATTALNFL-HLYHTIILCHTSE
. : ..... . . ... .: :. .:::. : : : :: :. :. . .:
NP_066 VHPPRVKQLLALCCGAFSRQQLCNLECIVLHKLHFTLGAPTISFFLEHFTHARVEAGQAE
200 210 220 230 240 250
180 190 200 210 220 230
pF1KB4 RKEILSLDKLE---AQLKACNCRLIFSKAKPSVLALCLLNLEVETLKSVELLEILLLVKK
.: : . : :.:. . :.. .::.::.: : : . :.
NP_066 ASEALEAQALARGVAELSLAD--YAFTSYSPSLLAICCLALADRMLRVSRPVDLRLGDHP
260 270 280 290 300
240 250 260 270 280 290
pF1KB4 HSKINDTEFFYWRELVSKCLAEYSSPECCKPDLKKLVWIVSRRTAQNLHNSYYSVPELPT
NP_066 EAALEDCMGKLQLLVAINSTSLTHMLPVQICEKCSLPPSSK
310 320 330 340 350
>>XP_011515668 (OMIM: 603775) PREDICTED: G1/S-specific c (288 aa)
initn: 119 init1: 71 opt: 180 Z-score: 224.0 bits: 49.6 E(85289): 9.7e-06
Smith-Waterman score: 180; 29.3% identity (63.8% similar) in 116 aa overlap (51-165:137-250)
30 40 50 60 70 80
pF1KB4 LNVYLEQEERFQPREKGLSLIEATPENDNTLCPGLRNAKVEDLRSLANFFGSCTETFVLA
: : .:. .. : . . . ::: ::
XP_011 WGCSKEVWLNMLKKESRYVHDKHFEVLHSDLEPQMRSILLDWLLEVCEVYTLHRETFYLA
110 120 130 140 150 160
90 100 110 120 130
pF1KB4 VNILDRFLALMK-VKPKHLSCIGVCSFLLAARIVEEDCNIPSTHDVIRISQCKCTASDIK
...:::. .: .. . :. ::. :...:... :. :. .. ... :. ::
XP_011 QDFFDRFMLTQKDINKNMLQLIGITSLFIASKL--EEIYAPKLQEFAYVTDGACSEEDIL
170 180 190 200 210 220
140 150 160 170 180 190
pF1KB4 RMEKIISEKLHYELEATTALNFLHLYHTIILCHTSERKEILSLDKLEAQLKACNCRLIFS
::: :: . :..:: .: ...:.:.
XP_011 RMELIILKALKWELCPVTIISWLNLFLQVDALKDAPKVLLPQYSQETFIQIAQLFSHFSY
230 240 250 260 270 280
>>NP_477097 (OMIM: 603775) G1/S-specific cyclin-E2 [Homo (404 aa)
initn: 119 init1: 71 opt: 180 Z-score: 221.8 bits: 49.7 E(85289): 1.3e-05
Smith-Waterman score: 180; 29.3% identity (63.8% similar) in 116 aa overlap (51-165:137-250)
30 40 50 60 70 80
pF1KB4 LNVYLEQEERFQPREKGLSLIEATPENDNTLCPGLRNAKVEDLRSLANFFGSCTETFVLA
: : .:. .. : . . . ::: ::
NP_477 WGCSKEVWLNMLKKESRYVHDKHFEVLHSDLEPQMRSILLDWLLEVCEVYTLHRETFYLA
110 120 130 140 150 160
90 100 110 120 130
pF1KB4 VNILDRFLALMK-VKPKHLSCIGVCSFLLAARIVEEDCNIPSTHDVIRISQCKCTASDIK
...:::. .: .. . :. ::. :...:... :. :. .. ... :. ::
NP_477 QDFFDRFMLTQKDINKNMLQLIGITSLFIASKL--EEIYAPKLQEFAYVTDGACSEEDIL
170 180 190 200 210 220
140 150 160 170 180 190
pF1KB4 RMEKIISEKLHYELEATTALNFLHLYHTIILCHTSERKEILSLDKLEAQLKACNCRLIFS
::: :: . :..:: .: ...:.:.
NP_477 RMELIILKALKWELCPVTIISWLNLFLQVDALKDAPKVLLPQYSQETFIQIAQLLDLCIL
230 240 250 260 270 280
>>XP_016869446 (OMIM: 603775) PREDICTED: G1/S-specific c (404 aa)
initn: 119 init1: 71 opt: 180 Z-score: 221.8 bits: 49.7 E(85289): 1.3e-05
Smith-Waterman score: 180; 29.3% identity (63.8% similar) in 116 aa overlap (51-165:137-250)
30 40 50 60 70 80
pF1KB4 LNVYLEQEERFQPREKGLSLIEATPENDNTLCPGLRNAKVEDLRSLANFFGSCTETFVLA
: : .:. .. : . . . ::: ::
XP_016 WGCSKEVWLNMLKKESRYVHDKHFEVLHSDLEPQMRSILLDWLLEVCEVYTLHRETFYLA
110 120 130 140 150 160
90 100 110 120 130
pF1KB4 VNILDRFLALMK-VKPKHLSCIGVCSFLLAARIVEEDCNIPSTHDVIRISQCKCTASDIK
...:::. .: .. . :. ::. :...:... :. :. .. ... :. ::
XP_016 QDFFDRFMLTQKDINKNMLQLIGITSLFIASKL--EEIYAPKLQEFAYVTDGACSEEDIL
170 180 190 200 210 220
140 150 160 170 180 190
pF1KB4 RMEKIISEKLHYELEATTALNFLHLYHTIILCHTSERKEILSLDKLEAQLKACNCRLIFS
::: :: . :..:: .: ...:.:.
XP_016 RMELIILKALKWELCPVTIISWLNLFLQVDALKDAPKVLLPQYSQETFIQIAQLLDLCIL
230 240 250 260 270 280
>>XP_016869448 (OMIM: 603775) PREDICTED: G1/S-specific c (404 aa)
initn: 119 init1: 71 opt: 180 Z-score: 221.8 bits: 49.7 E(85289): 1.3e-05
Smith-Waterman score: 180; 29.3% identity (63.8% similar) in 116 aa overlap (51-165:137-250)
30 40 50 60 70 80
pF1KB4 LNVYLEQEERFQPREKGLSLIEATPENDNTLCPGLRNAKVEDLRSLANFFGSCTETFVLA
: : .:. .. : . . . ::: ::
XP_016 WGCSKEVWLNMLKKESRYVHDKHFEVLHSDLEPQMRSILLDWLLEVCEVYTLHRETFYLA
110 120 130 140 150 160
90 100 110 120 130
pF1KB4 VNILDRFLALMK-VKPKHLSCIGVCSFLLAARIVEEDCNIPSTHDVIRISQCKCTASDIK
...:::. .: .. . :. ::. :...:... :. :. .. ... :. ::
XP_016 QDFFDRFMLTQKDINKNMLQLIGITSLFIASKL--EEIYAPKLQEFAYVTDGACSEEDIL
170 180 190 200 210 220
140 150 160 170 180 190
pF1KB4 RMEKIISEKLHYELEATTALNFLHLYHTIILCHTSERKEILSLDKLEAQLKACNCRLIFS
::: :: . :..:: .: ...:.:.
XP_016 RMELIILKALKWELCPVTIISWLNLFLQVDALKDAPKVLLPQYSQETFIQIAQLLDLCIL
230 240 250 260 270 280
344 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 05:46:01 2016 done: Sat Nov 5 05:46:02 2016
Total Scan time: 8.230 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]