Result of FASTA (omim) for
pF1KB4280
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB4280, 271 aa
1>>>pF1KB4280 271 - 271 aa - 271 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0435+/-0.000352; mu= 16.2586+/- 0.022
mean_var=63.0745+/-12.698, 0's: 0 Z-trim(115.3): 16 B-trim: 0 in 0/49
Lambda= 0.161491
statistics sampled from 25633 (25649) to 25633 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.678), E-opt: 0.2 (0.301), width: 16
Scan time: 7.400
The best scores are: opt bits E(85289)
NP_000745 (OMIM: 116790,167870,181500) catechol O- ( 271) 1830 434.7 8.6e-122
XP_016884083 (OMIM: 116790,167870,181500) PREDICTE ( 271) 1830 434.7 8.6e-122
XP_016884084 (OMIM: 116790,167870,181500) PREDICTE ( 271) 1830 434.7 8.6e-122
NP_001128633 (OMIM: 116790,167870,181500) catechol ( 271) 1830 434.7 8.6e-122
NP_001128634 (OMIM: 116790,167870,181500) catechol ( 271) 1830 434.7 8.6e-122
XP_011528188 (OMIM: 116790,167870,181500) PREDICTE ( 309) 1830 434.8 9.6e-122
NP_009294 (OMIM: 116790,167870,181500) catechol O- ( 221) 1485 354.3 1.1e-97
XP_016872846 (OMIM: 611451,612414) PREDICTED: tran ( 258) 569 140.9 2.3e-33
XP_016872845 (OMIM: 611451,612414) PREDICTED: tran ( 258) 569 140.9 2.3e-33
XP_016872847 (OMIM: 611451,612414) PREDICTED: tran ( 258) 569 140.9 2.3e-33
NP_001138781 (OMIM: 611451,612414) transmembrane O ( 291) 569 140.9 2.5e-33
NP_001138780 (OMIM: 611451,612414) transmembrane O ( 291) 569 140.9 2.5e-33
NP_001138782 (OMIM: 611451,612414) transmembrane O ( 251) 563 139.5 5.9e-33
>>NP_000745 (OMIM: 116790,167870,181500) catechol O-meth (271 aa)
initn: 1830 init1: 1830 opt: 1830 Z-score: 2307.5 bits: 434.7 E(85289): 8.6e-122
Smith-Waterman score: 1830; 99.6% identity (100.0% similar) in 271 aa overlap (1-271:1-271)
10 20 30 40 50 60
pF1KB4 MPEAPPLLLAAVLLGLVLLVVLLLLLRHWGWGLCLIGWNEFILQPIHNLLMGDTKEQRIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MPEAPPLLLAAVLLGLVLLVVLLLLLRHWGWGLCLIGWNEFILQPIHNLLMGDTKEQRIL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 NHVLQHAEPGNAQSVLEAIDTYCEQKEWAMNVGDKKGKIVDAVIQEHQPSVLLELGAYCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 NHVLQHAEPGNAQSVLEAIDTYCEQKEWAMNVGDKKGKIVDAVIQEHQPSVLLELGAYCG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 YSAVRMARLLSPGARLITIEINPDCAAITQRMVDFAGMKDKVTLVVGASQDIIPQLKKKY
:::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::
NP_000 YSAVRMARLLSPGARLITIEINPDCAAITQRMVDFAGVKDKVTLVVGASQDIIPQLKKKY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 DVDTLDMVFLDHWKDRYLPDTLLLEECGLLRKGTVLLADNVICPGAPDFLAHVRGSSCFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 DVDTLDMVFLDHWKDRYLPDTLLLEECGLLRKGTVLLADNVICPGAPDFLAHVRGSSCFE
190 200 210 220 230 240
250 260 270
pF1KB4 CTHYQSFLEYREVVDGLEKAIYKGPGSEAGP
:::::::::::::::::::::::::::::::
NP_000 CTHYQSFLEYREVVDGLEKAIYKGPGSEAGP
250 260 270
>>XP_016884083 (OMIM: 116790,167870,181500) PREDICTED: c (271 aa)
initn: 1830 init1: 1830 opt: 1830 Z-score: 2307.5 bits: 434.7 E(85289): 8.6e-122
Smith-Waterman score: 1830; 99.6% identity (100.0% similar) in 271 aa overlap (1-271:1-271)
10 20 30 40 50 60
pF1KB4 MPEAPPLLLAAVLLGLVLLVVLLLLLRHWGWGLCLIGWNEFILQPIHNLLMGDTKEQRIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MPEAPPLLLAAVLLGLVLLVVLLLLLRHWGWGLCLIGWNEFILQPIHNLLMGDTKEQRIL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 NHVLQHAEPGNAQSVLEAIDTYCEQKEWAMNVGDKKGKIVDAVIQEHQPSVLLELGAYCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NHVLQHAEPGNAQSVLEAIDTYCEQKEWAMNVGDKKGKIVDAVIQEHQPSVLLELGAYCG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 YSAVRMARLLSPGARLITIEINPDCAAITQRMVDFAGMKDKVTLVVGASQDIIPQLKKKY
:::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::
XP_016 YSAVRMARLLSPGARLITIEINPDCAAITQRMVDFAGVKDKVTLVVGASQDIIPQLKKKY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 DVDTLDMVFLDHWKDRYLPDTLLLEECGLLRKGTVLLADNVICPGAPDFLAHVRGSSCFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DVDTLDMVFLDHWKDRYLPDTLLLEECGLLRKGTVLLADNVICPGAPDFLAHVRGSSCFE
190 200 210 220 230 240
250 260 270
pF1KB4 CTHYQSFLEYREVVDGLEKAIYKGPGSEAGP
:::::::::::::::::::::::::::::::
XP_016 CTHYQSFLEYREVVDGLEKAIYKGPGSEAGP
250 260 270
>>XP_016884084 (OMIM: 116790,167870,181500) PREDICTED: c (271 aa)
initn: 1830 init1: 1830 opt: 1830 Z-score: 2307.5 bits: 434.7 E(85289): 8.6e-122
Smith-Waterman score: 1830; 99.6% identity (100.0% similar) in 271 aa overlap (1-271:1-271)
10 20 30 40 50 60
pF1KB4 MPEAPPLLLAAVLLGLVLLVVLLLLLRHWGWGLCLIGWNEFILQPIHNLLMGDTKEQRIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MPEAPPLLLAAVLLGLVLLVVLLLLLRHWGWGLCLIGWNEFILQPIHNLLMGDTKEQRIL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 NHVLQHAEPGNAQSVLEAIDTYCEQKEWAMNVGDKKGKIVDAVIQEHQPSVLLELGAYCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NHVLQHAEPGNAQSVLEAIDTYCEQKEWAMNVGDKKGKIVDAVIQEHQPSVLLELGAYCG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 YSAVRMARLLSPGARLITIEINPDCAAITQRMVDFAGMKDKVTLVVGASQDIIPQLKKKY
:::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::
XP_016 YSAVRMARLLSPGARLITIEINPDCAAITQRMVDFAGVKDKVTLVVGASQDIIPQLKKKY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 DVDTLDMVFLDHWKDRYLPDTLLLEECGLLRKGTVLLADNVICPGAPDFLAHVRGSSCFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DVDTLDMVFLDHWKDRYLPDTLLLEECGLLRKGTVLLADNVICPGAPDFLAHVRGSSCFE
190 200 210 220 230 240
250 260 270
pF1KB4 CTHYQSFLEYREVVDGLEKAIYKGPGSEAGP
:::::::::::::::::::::::::::::::
XP_016 CTHYQSFLEYREVVDGLEKAIYKGPGSEAGP
250 260 270
>>NP_001128633 (OMIM: 116790,167870,181500) catechol O-m (271 aa)
initn: 1830 init1: 1830 opt: 1830 Z-score: 2307.5 bits: 434.7 E(85289): 8.6e-122
Smith-Waterman score: 1830; 99.6% identity (100.0% similar) in 271 aa overlap (1-271:1-271)
10 20 30 40 50 60
pF1KB4 MPEAPPLLLAAVLLGLVLLVVLLLLLRHWGWGLCLIGWNEFILQPIHNLLMGDTKEQRIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MPEAPPLLLAAVLLGLVLLVVLLLLLRHWGWGLCLIGWNEFILQPIHNLLMGDTKEQRIL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 NHVLQHAEPGNAQSVLEAIDTYCEQKEWAMNVGDKKGKIVDAVIQEHQPSVLLELGAYCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NHVLQHAEPGNAQSVLEAIDTYCEQKEWAMNVGDKKGKIVDAVIQEHQPSVLLELGAYCG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 YSAVRMARLLSPGARLITIEINPDCAAITQRMVDFAGMKDKVTLVVGASQDIIPQLKKKY
:::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::
NP_001 YSAVRMARLLSPGARLITIEINPDCAAITQRMVDFAGVKDKVTLVVGASQDIIPQLKKKY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 DVDTLDMVFLDHWKDRYLPDTLLLEECGLLRKGTVLLADNVICPGAPDFLAHVRGSSCFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DVDTLDMVFLDHWKDRYLPDTLLLEECGLLRKGTVLLADNVICPGAPDFLAHVRGSSCFE
190 200 210 220 230 240
250 260 270
pF1KB4 CTHYQSFLEYREVVDGLEKAIYKGPGSEAGP
:::::::::::::::::::::::::::::::
NP_001 CTHYQSFLEYREVVDGLEKAIYKGPGSEAGP
250 260 270
>>NP_001128634 (OMIM: 116790,167870,181500) catechol O-m (271 aa)
initn: 1830 init1: 1830 opt: 1830 Z-score: 2307.5 bits: 434.7 E(85289): 8.6e-122
Smith-Waterman score: 1830; 99.6% identity (100.0% similar) in 271 aa overlap (1-271:1-271)
10 20 30 40 50 60
pF1KB4 MPEAPPLLLAAVLLGLVLLVVLLLLLRHWGWGLCLIGWNEFILQPIHNLLMGDTKEQRIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MPEAPPLLLAAVLLGLVLLVVLLLLLRHWGWGLCLIGWNEFILQPIHNLLMGDTKEQRIL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 NHVLQHAEPGNAQSVLEAIDTYCEQKEWAMNVGDKKGKIVDAVIQEHQPSVLLELGAYCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NHVLQHAEPGNAQSVLEAIDTYCEQKEWAMNVGDKKGKIVDAVIQEHQPSVLLELGAYCG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 YSAVRMARLLSPGARLITIEINPDCAAITQRMVDFAGMKDKVTLVVGASQDIIPQLKKKY
:::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::
NP_001 YSAVRMARLLSPGARLITIEINPDCAAITQRMVDFAGVKDKVTLVVGASQDIIPQLKKKY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 DVDTLDMVFLDHWKDRYLPDTLLLEECGLLRKGTVLLADNVICPGAPDFLAHVRGSSCFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DVDTLDMVFLDHWKDRYLPDTLLLEECGLLRKGTVLLADNVICPGAPDFLAHVRGSSCFE
190 200 210 220 230 240
250 260 270
pF1KB4 CTHYQSFLEYREVVDGLEKAIYKGPGSEAGP
:::::::::::::::::::::::::::::::
NP_001 CTHYQSFLEYREVVDGLEKAIYKGPGSEAGP
250 260 270
>>XP_011528188 (OMIM: 116790,167870,181500) PREDICTED: c (309 aa)
initn: 1830 init1: 1830 opt: 1830 Z-score: 2306.7 bits: 434.8 E(85289): 9.6e-122
Smith-Waterman score: 1830; 99.6% identity (100.0% similar) in 271 aa overlap (1-271:39-309)
10 20 30
pF1KB4 MPEAPPLLLAAVLLGLVLLVVLLLLLRHWG
::::::::::::::::::::::::::::::
XP_011 NNICFAAELRGDPRPLPQPEGWSLLRGALKMPEAPPLLLAAVLLGLVLLVVLLLLLRHWG
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB4 WGLCLIGWNEFILQPIHNLLMGDTKEQRILNHVLQHAEPGNAQSVLEAIDTYCEQKEWAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WGLCLIGWNEFILQPIHNLLMGDTKEQRILNHVLQHAEPGNAQSVLEAIDTYCEQKEWAM
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB4 NVGDKKGKIVDAVIQEHQPSVLLELGAYCGYSAVRMARLLSPGARLITIEINPDCAAITQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NVGDKKGKIVDAVIQEHQPSVLLELGAYCGYSAVRMARLLSPGARLITIEINPDCAAITQ
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB4 RMVDFAGMKDKVTLVVGASQDIIPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEECGLL
:::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RMVDFAGVKDKVTLVVGASQDIIPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEECGLL
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB4 RKGTVLLADNVICPGAPDFLAHVRGSSCFECTHYQSFLEYREVVDGLEKAIYKGPGSEAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RKGTVLLADNVICPGAPDFLAHVRGSSCFECTHYQSFLEYREVVDGLEKAIYKGPGSEAG
250 260 270 280 290 300
pF1KB4 P
:
XP_011 P
>>NP_009294 (OMIM: 116790,167870,181500) catechol O-meth (221 aa)
initn: 1485 init1: 1485 opt: 1485 Z-score: 1874.4 bits: 354.3 E(85289): 1.1e-97
Smith-Waterman score: 1485; 99.5% identity (100.0% similar) in 221 aa overlap (51-271:1-221)
30 40 50 60 70 80
pF1KB4 VLLLLLRHWGWGLCLIGWNEFILQPIHNLLMGDTKEQRILNHVLQHAEPGNAQSVLEAID
::::::::::::::::::::::::::::::
NP_009 MGDTKEQRILNHVLQHAEPGNAQSVLEAID
10 20 30
90 100 110 120 130 140
pF1KB4 TYCEQKEWAMNVGDKKGKIVDAVIQEHQPSVLLELGAYCGYSAVRMARLLSPGARLITIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 TYCEQKEWAMNVGDKKGKIVDAVIQEHQPSVLLELGAYCGYSAVRMARLLSPGARLITIE
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB4 INPDCAAITQRMVDFAGMKDKVTLVVGASQDIIPQLKKKYDVDTLDMVFLDHWKDRYLPD
:::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::
NP_009 INPDCAAITQRMVDFAGVKDKVTLVVGASQDIIPQLKKKYDVDTLDMVFLDHWKDRYLPD
100 110 120 130 140 150
210 220 230 240 250 260
pF1KB4 TLLLEECGLLRKGTVLLADNVICPGAPDFLAHVRGSSCFECTHYQSFLEYREVVDGLEKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 TLLLEECGLLRKGTVLLADNVICPGAPDFLAHVRGSSCFECTHYQSFLEYREVVDGLEKA
160 170 180 190 200 210
270
pF1KB4 IYKGPGSEAGP
:::::::::::
NP_009 IYKGPGSEAGP
220
>>XP_016872846 (OMIM: 611451,612414) PREDICTED: transmem (258 aa)
initn: 531 init1: 277 opt: 569 Z-score: 720.1 bits: 140.9 E(85289): 2.3e-33
Smith-Waterman score: 569; 36.3% identity (67.6% similar) in 259 aa overlap (10-266:4-258)
10 20 30 40 50 60
pF1KB4 MPEAPPLLLAAVLLGLVLLVVLLLLLRHWGWGLCLIGWNEFILQPIHNLLMGDTKEQRIL
: .: : :.:.::. ::. : .:. ... : : :.: .
XP_016 MSPAIALAFLPLVVTLLVRYRHYFRLLV----RTVLLRSLRDCLSGLRIEERAF
10 20 30 40 50
70 80 90 100 110 120
pF1KB4 NHVLQHAEPGNAQSVLEAIDTYCEQKEWAMNVGDKKGKIVDAVIQEHQPSVLLELGAYCG
..:: :: ::. .: ..: . . :. ..: ::.:. ...:. :. .::::.:::
XP_016 SYVLTHALPGDPGHILTTLDHWSSRCEYLSHMGPVKGQILMRLVEEKAPACVLELGTYCG
60 70 80 90 100 110
130 140 150 160 170
pF1KB4 YSAVRMARLLSPGARLITIEINPDCAAITQRMVDFAGMKDK-VTLVVGASQDIIPQLKKK
::.. .:: : ::.::.:.: .: ::...... .::. .. : :.::.:.:.:: :. .
XP_016 YSTLLIARALPPGGRLLTVERDPRTAAVAEKLIRLAGFDEHMVELIVGSSEDVIPCLRTQ
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB4 YDVDTLDMVFLDHWKDRYLPDTLLLEECGLLRKGTVLLADNVICPGAPDFLAHVRGSSCF
:... :.:.: : :: : ::: .:: :...:::.:. :::: :: .... . .
XP_016 YQLSRADLVLLAHRPRCYLRDLQLLEAHALLPAGATVLADHVLFPGAPRFLQYAKSCGRY
180 190 200 210 220 230
240 250 260 270
pF1KB4 ECT-HYQSFLEYREVVDGLEKAIYKGPGSEAGP
.: :. .. .. . ::. . : :::
XP_016 RCRLHHTGLPDFPAIKDGIAQLTYAGPG
240 250
>>XP_016872845 (OMIM: 611451,612414) PREDICTED: transmem (258 aa)
initn: 531 init1: 277 opt: 569 Z-score: 720.1 bits: 140.9 E(85289): 2.3e-33
Smith-Waterman score: 569; 36.3% identity (67.6% similar) in 259 aa overlap (10-266:4-258)
10 20 30 40 50 60
pF1KB4 MPEAPPLLLAAVLLGLVLLVVLLLLLRHWGWGLCLIGWNEFILQPIHNLLMGDTKEQRIL
: .: : :.:.::. ::. : .:. ... : : :.: .
XP_016 MSPAIALAFLPLVVTLLVRYRHYFRLLV----RTVLLRSLRDCLSGLRIEERAF
10 20 30 40 50
70 80 90 100 110 120
pF1KB4 NHVLQHAEPGNAQSVLEAIDTYCEQKEWAMNVGDKKGKIVDAVIQEHQPSVLLELGAYCG
..:: :: ::. .: ..: . . :. ..: ::.:. ...:. :. .::::.:::
XP_016 SYVLTHALPGDPGHILTTLDHWSSRCEYLSHMGPVKGQILMRLVEEKAPACVLELGTYCG
60 70 80 90 100 110
130 140 150 160 170
pF1KB4 YSAVRMARLLSPGARLITIEINPDCAAITQRMVDFAGMKDK-VTLVVGASQDIIPQLKKK
::.. .:: : ::.::.:.: .: ::...... .::. .. : :.::.:.:.:: :. .
XP_016 YSTLLIARALPPGGRLLTVERDPRTAAVAEKLIRLAGFDEHMVELIVGSSEDVIPCLRTQ
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB4 YDVDTLDMVFLDHWKDRYLPDTLLLEECGLLRKGTVLLADNVICPGAPDFLAHVRGSSCF
:... :.:.: : :: : ::: .:: :...:::.:. :::: :: .... . .
XP_016 YQLSRADLVLLAHRPRCYLRDLQLLEAHALLPAGATVLADHVLFPGAPRFLQYAKSCGRY
180 190 200 210 220 230
240 250 260 270
pF1KB4 ECT-HYQSFLEYREVVDGLEKAIYKGPGSEAGP
.: :. .. .. . ::. . : :::
XP_016 RCRLHHTGLPDFPAIKDGIAQLTYAGPG
240 250
>>XP_016872847 (OMIM: 611451,612414) PREDICTED: transmem (258 aa)
initn: 531 init1: 277 opt: 569 Z-score: 720.1 bits: 140.9 E(85289): 2.3e-33
Smith-Waterman score: 569; 36.3% identity (67.6% similar) in 259 aa overlap (10-266:4-258)
10 20 30 40 50 60
pF1KB4 MPEAPPLLLAAVLLGLVLLVVLLLLLRHWGWGLCLIGWNEFILQPIHNLLMGDTKEQRIL
: .: : :.:.::. ::. : .:. ... : : :.: .
XP_016 MSPAIALAFLPLVVTLLVRYRHYFRLLV----RTVLLRSLRDCLSGLRIEERAF
10 20 30 40 50
70 80 90 100 110 120
pF1KB4 NHVLQHAEPGNAQSVLEAIDTYCEQKEWAMNVGDKKGKIVDAVIQEHQPSVLLELGAYCG
..:: :: ::. .: ..: . . :. ..: ::.:. ...:. :. .::::.:::
XP_016 SYVLTHALPGDPGHILTTLDHWSSRCEYLSHMGPVKGQILMRLVEEKAPACVLELGTYCG
60 70 80 90 100 110
130 140 150 160 170
pF1KB4 YSAVRMARLLSPGARLITIEINPDCAAITQRMVDFAGMKDK-VTLVVGASQDIIPQLKKK
::.. .:: : ::.::.:.: .: ::...... .::. .. : :.::.:.:.:: :. .
XP_016 YSTLLIARALPPGGRLLTVERDPRTAAVAEKLIRLAGFDEHMVELIVGSSEDVIPCLRTQ
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB4 YDVDTLDMVFLDHWKDRYLPDTLLLEECGLLRKGTVLLADNVICPGAPDFLAHVRGSSCF
:... :.:.: : :: : ::: .:: :...:::.:. :::: :: .... . .
XP_016 YQLSRADLVLLAHRPRCYLRDLQLLEAHALLPAGATVLADHVLFPGAPRFLQYAKSCGRY
180 190 200 210 220 230
240 250 260 270
pF1KB4 ECT-HYQSFLEYREVVDGLEKAIYKGPGSEAGP
.: :. .. .. . ::. . : :::
XP_016 RCRLHHTGLPDFPAIKDGIAQLTYAGPG
240 250
271 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 02:56:19 2016 done: Fri Nov 4 02:56:20 2016
Total Scan time: 7.400 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]