Result of FASTA (ccds) for
pF1KB4394
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB4394, 834 aa
1>>>pF1KB4394 834 - 834 aa - 834 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.9595+/-0.000946; mu= 6.8382+/- 0.058
mean_var=229.8972+/-46.440, 0's: 0 Z-trim(114.3): 20 B-trim: 6 in 1/51
Lambda= 0.084588
statistics sampled from 14835 (14854) to 14835 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.761), E-opt: 0.2 (0.456), width: 16
Scan time: 4.460
The best scores are: opt bits E(32554)
CCDS58386.1 PML gene_id:5371|Hs108|chr15 ( 585) 3897 488.6 1.3e-137
CCDS10258.1 PML gene_id:5371|Hs108|chr15 ( 781) 3587 450.9 3.9e-126
CCDS45300.1 PML gene_id:5371|Hs108|chr15 ( 423) 2896 366.4 6e-101
CCDS10256.1 PML gene_id:5371|Hs108|chr15 ( 435) 2896 366.4 6.1e-101
CCDS45299.1 PML gene_id:5371|Hs108|chr15 ( 560) 2896 366.5 7.4e-101
CCDS45298.1 PML gene_id:5371|Hs108|chr15 ( 611) 2896 366.5 7.9e-101
CCDS45297.1 PML gene_id:5371|Hs108|chr15 ( 633) 2896 366.5 8.1e-101
CCDS10257.1 PML gene_id:5371|Hs108|chr15 ( 829) 2896 366.6 9.9e-101
CCDS10255.1 PML gene_id:5371|Hs108|chr15 ( 882) 2896 366.6 1e-100
>>CCDS58386.1 PML gene_id:5371|Hs108|chr15 (585 aa)
initn: 3931 init1: 3897 opt: 3897 Z-score: 2584.1 bits: 488.6 E(32554): 1.3e-137
Smith-Waterman score: 3897; 99.8% identity (100.0% similar) in 573 aa overlap (1-573:1-573)
10 20 30 40 50 60
pF1KB4 MEPAPARSPRPQQDPARPQEPTMPPPETPSEGRQPSPSPSPTERAPASEEEFQFLRCQQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MEPAPARSPRPQQDPARPQEPTMPPPETPSEGRQPSPSPSPTERAPASEEEFQFLRCQQC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 QAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLGADTPALDNVFFESLQRRLSVYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 QAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLGADTPALDNVFFESLQRRLSVYR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 QIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARPLAELRNQSVREFLDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 QIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARPLAELRNQSVREFLDG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 TRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSELKCDISAEIQQRQEEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 TRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSELKCDISAEIQQRQEEL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 DAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVRQVVAHVRAQERELLEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 DAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVRQVVAHVRAQERELLEA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 VDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQEVLDMHGFLRQALCRLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 VDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQEVLDMHGFLRQALCRLR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB4 QEEPQSLQAAVRTDGFDEFKVRLQDLSSCITQGKDAAVSKKASPEAASTPRDPIDVDLDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 QEEPQSLQAAVRTDGFDEFKVRLQDLSSCITQGKDAAVSKKASPEAASTPRDPIDVDLDV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB4 SNTTTAQKRKCSQTQCPRKVIKMESEEGKEARLARSSPEQPRPSTSKAVSPPHLDGPPSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SNTTTAQKRKCSQTQCPRKVIKMESEEGKEARLARSSPEQPRPSTSKAVSPPHLDGPPSP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB4 RSPVIGSEVFLPNSNHVASGAGEAEERVVVISSSEDSDAENSSSRELDDSSSESSDLQLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 RSPVIGSEVFLPNSNHVASGAGEAEERVVVISSSEDSDAENSSSRELDDSSSESSDLQLE
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB4 GPSTLRVLDENLADPQAEDRPLVFFDLKIDNETQKISQLAAVNRESKFRVVIQPEAFFSI
::::::::::::::::::::::::::::::::.
CCDS58 GPSTLRVLDENLADPQAEDRPLVFFDLKIDNESGFSWGYPHPFLI
550 560 570 580
610 620 630 640 650 660
pF1KB4 YSKAVSLEVGLQHFLSFLSSMRRPILACYKLWGPGLPNFFRALEDINRLWEFQEAISGFL
>>CCDS10258.1 PML gene_id:5371|Hs108|chr15 (781 aa)
initn: 3587 init1: 3587 opt: 3587 Z-score: 2378.0 bits: 450.9 E(32554): 3.9e-126
Smith-Waterman score: 3587; 97.9% identity (98.9% similar) in 535 aa overlap (1-535:1-535)
10 20 30 40 50 60
pF1KB4 MEPAPARSPRPQQDPARPQEPTMPPPETPSEGRQPSPSPSPTERAPASEEEFQFLRCQQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MEPAPARSPRPQQDPARPQEPTMPPPETPSEGRQPSPSPSPTERAPASEEEFQFLRCQQC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 QAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLGADTPALDNVFFESLQRRLSVYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 QAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLGADTPALDNVFFESLQRRLSVYR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 QIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARPLAELRNQSVREFLDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 QIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARPLAELRNQSVREFLDG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 TRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSELKCDISAEIQQRQEEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 TRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSELKCDISAEIQQRQEEL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 DAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVRQVVAHVRAQERELLEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 DAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVRQVVAHVRAQERELLEA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 VDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQEVLDMHGFLRQALCRLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 VDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQEVLDMHGFLRQALCRLR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB4 QEEPQSLQAAVRTDGFDEFKVRLQDLSSCITQGKDAAVSKKASPEAASTPRDPIDVDLDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 QEEPQSLQAAVRTDGFDEFKVRLQDLSSCITQGKDAAVSKKASPEAASTPRDPIDVDLDV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB4 SNTTTAQKRKCSQTQCPRKVIKMESEEGKEARLARSSPEQPRPSTSKAVSPPHLDGPPSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 SNTTTAQKRKCSQTQCPRKVIKMESEEGKEARLARSSPEQPRPSTSKAVSPPHLDGPPSP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB4 RSPVIGSEVFLPNSNHVASGAGEAEERVVVISSSEDSDAENSSSRELDDSSSESSDLQLE
:::::::::::::::::::::::::::::::::::::::::: . .. . .::
CCDS10 RSPVIGSEVFLPNSNHVASGAGEAEERVVVISSSEDSDAENSCMEPMETAEPQSSPAHSS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB4 GPSTLRVLDENLADPQAEDRPLVFFDLKIDNETQKISQLAAVNRESKFRVVIQPEAFFSI
CCDS10 PAHSSPAHSSPVQSLLRAQGASSLPCGTYHPPAWPPHQPAEQAATPDAEPHSEPPDHQER
550 560 570 580 590 600
>>CCDS45300.1 PML gene_id:5371|Hs108|chr15 (423 aa)
initn: 2896 init1: 2896 opt: 2896 Z-score: 1925.9 bits: 366.4 E(32554): 6e-101
Smith-Waterman score: 2896; 100.0% identity (100.0% similar) in 418 aa overlap (1-418:1-418)
10 20 30 40 50 60
pF1KB4 MEPAPARSPRPQQDPARPQEPTMPPPETPSEGRQPSPSPSPTERAPASEEEFQFLRCQQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MEPAPARSPRPQQDPARPQEPTMPPPETPSEGRQPSPSPSPTERAPASEEEFQFLRCQQC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 QAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLGADTPALDNVFFESLQRRLSVYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 QAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLGADTPALDNVFFESLQRRLSVYR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 QIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARPLAELRNQSVREFLDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 QIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARPLAELRNQSVREFLDG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 TRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSELKCDISAEIQQRQEEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 TRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSELKCDISAEIQQRQEEL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 DAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVRQVVAHVRAQERELLEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 DAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVRQVVAHVRAQERELLEA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 VDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQEVLDMHGFLRQALCRLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 VDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQEVLDMHGFLRQALCRLR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB4 QEEPQSLQAAVRTDGFDEFKVRLQDLSSCITQGKDAAVSKKASPEAASTPRDPIDVDLDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 QEEPQSLQAAVRTDGFDEFKVRLQDLSSCITQGKDAAVSKKASPEAASTPRDPIDVDLRN
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB4 SNTTTAQKRKCSQTQCPRKVIKMESEEGKEARLARSSPEQPRPSTSKAVSPPHLDGPPSP
CCDS45 ALW
>>CCDS10256.1 PML gene_id:5371|Hs108|chr15 (435 aa)
initn: 2896 init1: 2896 opt: 2896 Z-score: 1925.7 bits: 366.4 E(32554): 6.1e-101
Smith-Waterman score: 2896; 100.0% identity (100.0% similar) in 418 aa overlap (1-418:1-418)
10 20 30 40 50 60
pF1KB4 MEPAPARSPRPQQDPARPQEPTMPPPETPSEGRQPSPSPSPTERAPASEEEFQFLRCQQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MEPAPARSPRPQQDPARPQEPTMPPPETPSEGRQPSPSPSPTERAPASEEEFQFLRCQQC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 QAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLGADTPALDNVFFESLQRRLSVYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 QAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLGADTPALDNVFFESLQRRLSVYR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 QIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARPLAELRNQSVREFLDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 QIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARPLAELRNQSVREFLDG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 TRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSELKCDISAEIQQRQEEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 TRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSELKCDISAEIQQRQEEL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 DAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVRQVVAHVRAQERELLEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 DAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVRQVVAHVRAQERELLEA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 VDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQEVLDMHGFLRQALCRLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 VDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQEVLDMHGFLRQALCRLR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB4 QEEPQSLQAAVRTDGFDEFKVRLQDLSSCITQGKDAAVSKKASPEAASTPRDPIDVDLDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 QEEPQSLQAAVRTDGFDEFKVRLQDLSSCITQGKDAAVSKKASPEAASTPRDPIDVDLLP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB4 SNTTTAQKRKCSQTQCPRKVIKMESEEGKEARLARSSPEQPRPSTSKAVSPPHLDGPPSP
CCDS10 PPAHALTGPAQSSTH
430
>>CCDS45299.1 PML gene_id:5371|Hs108|chr15 (560 aa)
initn: 3458 init1: 2896 opt: 2896 Z-score: 1924.2 bits: 366.5 E(32554): 7.4e-101
Smith-Waterman score: 3367; 91.0% identity (91.2% similar) in 556 aa overlap (1-507:1-556)
10 20 30 40 50 60
pF1KB4 MEPAPARSPRPQQDPARPQEPTMPPPETPSEGRQPSPSPSPTERAPASEEEFQFLRCQQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MEPAPARSPRPQQDPARPQEPTMPPPETPSEGRQPSPSPSPTERAPASEEEFQFLRCQQC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 QAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLGADTPALDNVFFESLQRRLSVYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 QAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLGADTPALDNVFFESLQRRLSVYR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 QIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARPLAELRNQSVREFLDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 QIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARPLAELRNQSVREFLDG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 TRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSELKCDISAEIQQRQEEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 TRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSELKCDISAEIQQRQEEL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 DAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVRQVVAHVRAQERELLEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 DAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVRQVVAHVRAQERELLEA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 VDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQEVLDMHGFLRQALCRLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 VDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQEVLDMHGFLRQALCRLR
310 320 330 340 350 360
370 380 390 400 410
pF1KB4 QEEPQSLQAAVRTDGFDEFKVRLQDLSSCITQGKDAAVSKKASPEAASTPRDPIDVDL--
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 QEEPQSLQAAVRTDGFDEFKVRLQDLSSCITQGKDAAVSKKASPEAASTPRDPIDVDLPE
370 380 390 400 410 420
420 430
pF1KB4 ----------------------------------------------DVSNTTTAQKRKCS
::::::::::::::
CCDS45 EAERVKAQVQALGLAEAQPMAVVQSVPGAHPVPVYAFSIKGPSYGEDVSNTTTAQKRKCS
430 440 450 460 470 480
440 450 460 470 480 490
pF1KB4 QTQCPRKVIKMESEEGKEARLARSSPEQPRPSTSKAVSPPHLDGPPSPRSPVIGSEVFLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 QTQCPRKVIKMESEEGKEARLARSSPEQPRPSTSKAVSPPHLDGPPSPRSPVIGSEVFLP
490 500 510 520 530 540
500 510 520 530 540 550
pF1KB4 NSNHVASGAGEA-EERVVVISSSEDSDAENSSSRELDDSSSESSDLQLEGPSTLRVLDEN
:::::::::::: .::
CCDS45 NSNHVASGAGEAGRERNALW
550 560
>>CCDS45298.1 PML gene_id:5371|Hs108|chr15 (611 aa)
initn: 3565 init1: 2896 opt: 2896 Z-score: 1923.7 bits: 366.5 E(32554): 7.9e-101
Smith-Waterman score: 3479; 88.4% identity (89.9% similar) in 596 aa overlap (1-547:1-596)
10 20 30 40 50 60
pF1KB4 MEPAPARSPRPQQDPARPQEPTMPPPETPSEGRQPSPSPSPTERAPASEEEFQFLRCQQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MEPAPARSPRPQQDPARPQEPTMPPPETPSEGRQPSPSPSPTERAPASEEEFQFLRCQQC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 QAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLGADTPALDNVFFESLQRRLSVYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 QAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLGADTPALDNVFFESLQRRLSVYR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 QIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARPLAELRNQSVREFLDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 QIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARPLAELRNQSVREFLDG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 TRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSELKCDISAEIQQRQEEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 TRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSELKCDISAEIQQRQEEL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 DAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVRQVVAHVRAQERELLEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 DAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVRQVVAHVRAQERELLEA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 VDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQEVLDMHGFLRQALCRLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 VDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQEVLDMHGFLRQALCRLR
310 320 330 340 350 360
370 380 390 400 410
pF1KB4 QEEPQSLQAAVRTDGFDEFKVRLQDLSSCITQGKDAAVSKKASPEAASTPRDPIDVDL--
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 QEEPQSLQAAVRTDGFDEFKVRLQDLSSCITQGKDAAVSKKASPEAASTPRDPIDVDLPE
370 380 390 400 410 420
420 430
pF1KB4 ----------------------------------------------DVSNTTTAQKRKCS
::::::::::::::
CCDS45 EAERVKAQVQALGLAEAQPMAVVQSVPGAHPVPVYAFSIKGPSYGEDVSNTTTAQKRKCS
430 440 450 460 470 480
440 450 460 470 480 490
pF1KB4 QTQCPRKVIKMESEEGKEARLARSSPEQPRPSTSKAVSPPHLDGPPSPRSPVIGSEVFLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 QTQCPRKVIKMESEEGKEARLARSSPEQPRPSTSKAVSPPHLDGPPSPRSPVIGSEVFLP
490 500 510 520 530 540
500 510 520 530 540 550
pF1KB4 NSNHVASGAGEAEERVVVISSSEDSDAENS-SSRELDDSSSESSDLQLEGPSTLRVLDEN
:::::::::::::::::::::::::::::: :. :.. . : .. .: . .:
CCDS45 NSNHVASGAGEAEERVVVISSSEDSDAENSVSGPEVQPRTPASPHFRSQGAQPQQVTLRL
550 560 570 580 590 600
560 570 580 590 600 610
pF1KB4 LADPQAEDRPLVFFDLKIDNETQKISQLAAVNRESKFRVVIQPEAFFSIYSKAVSLEVGL
CCDS45 ALRLGNFPVRH
610
>>CCDS45297.1 PML gene_id:5371|Hs108|chr15 (633 aa)
initn: 3883 init1: 2896 opt: 2896 Z-score: 1923.5 bits: 366.5 E(32554): 8.1e-101
Smith-Waterman score: 3791; 92.1% identity (92.3% similar) in 621 aa overlap (1-573:1-621)
10 20 30 40 50 60
pF1KB4 MEPAPARSPRPQQDPARPQEPTMPPPETPSEGRQPSPSPSPTERAPASEEEFQFLRCQQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MEPAPARSPRPQQDPARPQEPTMPPPETPSEGRQPSPSPSPTERAPASEEEFQFLRCQQC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 QAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLGADTPALDNVFFESLQRRLSVYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 QAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLGADTPALDNVFFESLQRRLSVYR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 QIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARPLAELRNQSVREFLDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 QIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARPLAELRNQSVREFLDG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 TRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSELKCDISAEIQQRQEEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 TRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSELKCDISAEIQQRQEEL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 DAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVRQVVAHVRAQERELLEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 DAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVRQVVAHVRAQERELLEA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 VDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQEVLDMHGFLRQALCRLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 VDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQEVLDMHGFLRQALCRLR
310 320 330 340 350 360
370 380 390 400 410
pF1KB4 QEEPQSLQAAVRTDGFDEFKVRLQDLSSCITQGKDAAVSKKASPEAASTPRDPIDVDL--
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 QEEPQSLQAAVRTDGFDEFKVRLQDLSSCITQGKDAAVSKKASPEAASTPRDPIDVDLPE
370 380 390 400 410 420
420 430
pF1KB4 ----------------------------------------------DVSNTTTAQKRKCS
::::::::::::::
CCDS45 EAERVKAQVQALGLAEAQPMAVVQSVPGAHPVPVYAFSIKGPSYGEDVSNTTTAQKRKCS
430 440 450 460 470 480
440 450 460 470 480 490
pF1KB4 QTQCPRKVIKMESEEGKEARLARSSPEQPRPSTSKAVSPPHLDGPPSPRSPVIGSEVFLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 QTQCPRKVIKMESEEGKEARLARSSPEQPRPSTSKAVSPPHLDGPPSPRSPVIGSEVFLP
490 500 510 520 530 540
500 510 520 530 540 550
pF1KB4 NSNHVASGAGEAEERVVVISSSEDSDAENSSSRELDDSSSESSDLQLEGPSTLRVLDENL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 NSNHVASGAGEAEERVVVISSSEDSDAENSSSRELDDSSSESSDLQLEGPSTLRVLDENL
550 560 570 580 590 600
560 570 580 590 600 610
pF1KB4 ADPQAEDRPLVFFDLKIDNETQKISQLAAVNRESKFRVVIQPEAFFSIYSKAVSLEVGLQ
::::::::::::::::::::.
CCDS45 ADPQAEDRPLVFFDLKIDNESGFSWGYPHPFLI
610 620 630
>>CCDS10257.1 PML gene_id:5371|Hs108|chr15 (829 aa)
initn: 3573 init1: 2896 opt: 2896 Z-score: 1921.9 bits: 366.6 E(32554): 9.9e-101
Smith-Waterman score: 3481; 89.9% identity (90.7% similar) in 583 aa overlap (1-535:1-583)
10 20 30 40 50 60
pF1KB4 MEPAPARSPRPQQDPARPQEPTMPPPETPSEGRQPSPSPSPTERAPASEEEFQFLRCQQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MEPAPARSPRPQQDPARPQEPTMPPPETPSEGRQPSPSPSPTERAPASEEEFQFLRCQQC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 QAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLGADTPALDNVFFESLQRRLSVYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 QAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLGADTPALDNVFFESLQRRLSVYR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 QIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARPLAELRNQSVREFLDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 QIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARPLAELRNQSVREFLDG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 TRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSELKCDISAEIQQRQEEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 TRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSELKCDISAEIQQRQEEL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 DAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVRQVVAHVRAQERELLEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 DAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVRQVVAHVRAQERELLEA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 VDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQEVLDMHGFLRQALCRLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 VDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQEVLDMHGFLRQALCRLR
310 320 330 340 350 360
370 380 390 400 410
pF1KB4 QEEPQSLQAAVRTDGFDEFKVRLQDLSSCITQGKDAAVSKKASPEAASTPRDPIDVDL--
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 QEEPQSLQAAVRTDGFDEFKVRLQDLSSCITQGKDAAVSKKASPEAASTPRDPIDVDLPE
370 380 390 400 410 420
420 430
pF1KB4 ----------------------------------------------DVSNTTTAQKRKCS
::::::::::::::
CCDS10 EAERVKAQVQALGLAEAQPMAVVQSVPGAHPVPVYAFSIKGPSYGEDVSNTTTAQKRKCS
430 440 450 460 470 480
440 450 460 470 480 490
pF1KB4 QTQCPRKVIKMESEEGKEARLARSSPEQPRPSTSKAVSPPHLDGPPSPRSPVIGSEVFLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 QTQCPRKVIKMESEEGKEARLARSSPEQPRPSTSKAVSPPHLDGPPSPRSPVIGSEVFLP
490 500 510 520 530 540
500 510 520 530 540 550
pF1KB4 NSNHVASGAGEAEERVVVISSSEDSDAENSSSRELDDSSSESSDLQLEGPSTLRVLDENL
:::::::::::::::::::::::::::::: . .. . .::
CCDS10 NSNHVASGAGEAEERVVVISSSEDSDAENSCMEPMETAEPQSSPAHSSPAHSSPAHSSPV
550 560 570 580 590 600
560 570 580 590 600 610
pF1KB4 ADPQAEDRPLVFFDLKIDNETQKISQLAAVNRESKFRVVIQPEAFFSIYSKAVSLEVGLQ
CCDS10 QSLLRAQGASSLPCGTYHPPAWPPHQPAEQAATPDAEPHSEPPDHQERPAVHRGIRYLLY
610 620 630 640 650 660
>>CCDS10255.1 PML gene_id:5371|Hs108|chr15 (882 aa)
initn: 5575 init1: 2896 opt: 2896 Z-score: 1921.5 bits: 366.6 E(32554): 1e-100
Smith-Waterman score: 5383; 94.5% identity (94.5% similar) in 866 aa overlap (1-818:1-866)
10 20 30 40 50 60
pF1KB4 MEPAPARSPRPQQDPARPQEPTMPPPETPSEGRQPSPSPSPTERAPASEEEFQFLRCQQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MEPAPARSPRPQQDPARPQEPTMPPPETPSEGRQPSPSPSPTERAPASEEEFQFLRCQQC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 QAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLGADTPALDNVFFESLQRRLSVYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 QAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLGADTPALDNVFFESLQRRLSVYR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 QIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARPLAELRNQSVREFLDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 QIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARPLAELRNQSVREFLDG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 TRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSELKCDISAEIQQRQEEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 TRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSELKCDISAEIQQRQEEL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 DAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVRQVVAHVRAQERELLEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 DAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVRQVVAHVRAQERELLEA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 VDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQEVLDMHGFLRQALCRLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 VDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQEVLDMHGFLRQALCRLR
310 320 330 340 350 360
370 380 390 400 410
pF1KB4 QEEPQSLQAAVRTDGFDEFKVRLQDLSSCITQGKDAAVSKKASPEAASTPRDPIDVDL--
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 QEEPQSLQAAVRTDGFDEFKVRLQDLSSCITQGKDAAVSKKASPEAASTPRDPIDVDLPE
370 380 390 400 410 420
420 430
pF1KB4 ----------------------------------------------DVSNTTTAQKRKCS
::::::::::::::
CCDS10 EAERVKAQVQALGLAEAQPMAVVQSVPGAHPVPVYAFSIKGPSYGEDVSNTTTAQKRKCS
430 440 450 460 470 480
440 450 460 470 480 490
pF1KB4 QTQCPRKVIKMESEEGKEARLARSSPEQPRPSTSKAVSPPHLDGPPSPRSPVIGSEVFLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 QTQCPRKVIKMESEEGKEARLARSSPEQPRPSTSKAVSPPHLDGPPSPRSPVIGSEVFLP
490 500 510 520 530 540
500 510 520 530 540 550
pF1KB4 NSNHVASGAGEAEERVVVISSSEDSDAENSSSRELDDSSSESSDLQLEGPSTLRVLDENL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 NSNHVASGAGEAEERVVVISSSEDSDAENSSSRELDDSSSESSDLQLEGPSTLRVLDENL
550 560 570 580 590 600
560 570 580 590 600 610
pF1KB4 ADPQAEDRPLVFFDLKIDNETQKISQLAAVNRESKFRVVIQPEAFFSIYSKAVSLEVGLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 ADPQAEDRPLVFFDLKIDNETQKISQLAAVNRESKFRVVIQPEAFFSIYSKAVSLEVGLQ
610 620 630 640 650 660
620 630 640 650 660 670
pF1KB4 HFLSFLSSMRRPILACYKLWGPGLPNFFRALEDINRLWEFQEAISGFLAALPLIRERVPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 HFLSFLSSMRRPILACYKLWGPGLPNFFRALEDINRLWEFQEAISGFLAALPLIRERVPG
670 680 690 700 710 720
680 690 700 710 720 730
pF1KB4 ASSFKLKNLAQTYLARNMSERSAMAAVLAMRDLCRLLEVSPGPQLAQHVYPFSSLQCFAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 ASSFKLKNLAQTYLARNMSERSAMAAVLAMRDLCRLLEVSPGPQLAQHVYPFSSLQCFAS
730 740 750 760 770 780
740 750 760 770 780 790
pF1KB4 LQPLVQAAVLPRAEARLLALHNVSFMELLSAHRRDRQGGLKKYSRYLSLQTTTLPPAQPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LQPLVQAAVLPRAEARLLALHNVSFMELLSAHRRDRQGGLKKYSRYLSLQTTTLPPAQPA
790 800 810 820 830 840
800 810 820 830
pF1KB4 FNLQALGTYFEGLLEGPALARAEGVSTPLAGRGLAERASQQS
::::::::::::::::::::::::::
CCDS10 FNLQALGTYFEGLLEGPALARAEGVSTPLAGRGLAERASQQS
850 860 870 880
834 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 14:56:38 2016 done: Thu Nov 3 14:56:39 2016
Total Scan time: 4.460 Total Display time: 0.140
Function used was FASTA [36.3.4 Apr, 2011]