Result of FASTA (ccds) for
pF1KB4445
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB4445, 149 aa
1>>>pF1KB4445 149 - 149 aa - 149 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5815+/-0.00106; mu= 11.2883+/- 0.064
mean_var=113.1007+/-22.111, 0's: 0 Z-trim(107.2): 133 B-trim: 5 in 1/50
Lambda= 0.120598
statistics sampled from 9265 (9430) to 9265 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.659), E-opt: 0.2 (0.29), width: 16
Scan time: 1.490
The best scores are: opt bits E(32554)
CCDS1832.1 CALM2 gene_id:805|Hs108|chr2 ( 149) 959 177.1 3.5e-45
CCDS33061.1 CALM3 gene_id:808|Hs108|chr19 ( 149) 959 177.1 3.5e-45
CCDS9892.1 CALM1 gene_id:801|Hs108|chr14 ( 149) 959 177.1 3.5e-45
CCDS7069.1 CALML3 gene_id:810|Hs108|chr10 ( 149) 855 159.0 9.9e-40
CCDS13375.1 TNNC2 gene_id:7125|Hs108|chr20 ( 160) 532 102.8 8.6e-23
CCDS2857.1 TNNC1 gene_id:7134|Hs108|chr3 ( 161) 512 99.4 9.6e-22
CCDS11820.1 CETN1 gene_id:1068|Hs108|chr18 ( 172) 502 97.6 3.4e-21
CCDS14716.1 CETN2 gene_id:1069|Hs108|chrX ( 172) 496 96.6 6.9e-21
CCDS7068.1 CALML5 gene_id:51806|Hs108|chr10 ( 146) 494 96.2 7.9e-21
CCDS30566.1 CALML6 gene_id:163688|Hs108|chr1 ( 181) 440 86.9 6.2e-18
CCDS81255.1 CALML6 gene_id:163688|Hs108|chr1 ( 164) 436 86.1 9.3e-18
CCDS31834.1 MYL6 gene_id:4637|Hs108|chr12 ( 151) 435 85.9 1e-17
CCDS10226.2 CALML4 gene_id:91860|Hs108|chr15 ( 196) 434 85.9 1.3e-17
CCDS8906.1 MYL6 gene_id:4637|Hs108|chr12 ( 151) 428 84.7 2.3e-17
CCDS12709.1 CABP5 gene_id:56344|Hs108|chr19 ( 173) 422 83.7 5.2e-17
CCDS9204.1 CABP1 gene_id:9478|Hs108|chr12 ( 167) 418 83.0 8.3e-17
CCDS9205.1 CABP1 gene_id:9478|Hs108|chr12 ( 227) 418 83.2 1e-16
CCDS31913.1 CABP1 gene_id:9478|Hs108|chr12 ( 370) 418 83.4 1.4e-16
CCDS13276.1 MYL9 gene_id:10398|Hs108|chr20 ( 172) 411 81.8 2e-16
CCDS11831.1 MYL12B gene_id:103910|Hs108|chr18 ( 172) 407 81.1 3.2e-16
CCDS8905.1 MYL6B gene_id:140465|Hs108|chr12 ( 208) 406 81.0 4.1e-16
CCDS2391.1 MYL1 gene_id:4632|Hs108|chr2 ( 150) 402 80.2 5.3e-16
CCDS8170.1 CABP2 gene_id:51475|Hs108|chr11 ( 220) 403 80.5 6.1e-16
CCDS11830.1 MYL12A gene_id:10627|Hs108|chr18 ( 171) 401 80.1 6.5e-16
CCDS77145.1 MYL12A gene_id:10627|Hs108|chr18 ( 177) 401 80.1 6.7e-16
CCDS73333.1 CABP4 gene_id:57010|Hs108|chr11 ( 170) 398 79.5 9.4e-16
CCDS8166.1 CABP4 gene_id:57010|Hs108|chr11 ( 275) 398 79.8 1.3e-15
CCDS2390.1 MYL1 gene_id:4632|Hs108|chr2 ( 194) 395 79.1 1.5e-15
CCDS4066.1 CETN3 gene_id:1070|Hs108|chr5 ( 167) 385 77.3 4.4e-15
CCDS2746.1 MYL3 gene_id:4634|Hs108|chr3 ( 195) 382 76.8 7.1e-15
CCDS11510.1 MYL4 gene_id:4635|Hs108|chr17 ( 197) 360 73.0 1e-13
CCDS75274.1 CETN3 gene_id:1070|Hs108|chr5 ( 191) 342 69.9 8.7e-13
CCDS66808.1 CALML4 gene_id:91860|Hs108|chr15 ( 120) 338 68.9 1e-12
CCDS31082.1 EFCAB2 gene_id:84288|Hs108|chr1 ( 162) 322 66.3 8.7e-12
CCDS31901.1 MYL2 gene_id:4633|Hs108|chr12 ( 166) 318 65.6 1.4e-11
CCDS43197.1 MYL5 gene_id:4636|Hs108|chr4 ( 173) 314 64.9 2.4e-11
CCDS42052.1 CALML4 gene_id:91860|Hs108|chr15 ( 149) 306 63.5 5.6e-11
CCDS46310.1 PPP3R1 gene_id:5534|Hs108|chr2 ( 170) 302 62.8 1e-10
>>CCDS1832.1 CALM2 gene_id:805|Hs108|chr2 (149 aa)
initn: 959 init1: 959 opt: 959 Z-score: 924.5 bits: 177.1 E(32554): 3.5e-45
Smith-Waterman score: 959; 100.0% identity (100.0% similar) in 149 aa overlap (1-149:1-149)
10 20 30 40 50 60
pF1KB4 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS18 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS18 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE
70 80 90 100 110 120
130 140
pF1KB4 EVDEMIREADIDGDGQVNYEEFVQMMTAK
:::::::::::::::::::::::::::::
CCDS18 EVDEMIREADIDGDGQVNYEEFVQMMTAK
130 140
>>CCDS33061.1 CALM3 gene_id:808|Hs108|chr19 (149 aa)
initn: 959 init1: 959 opt: 959 Z-score: 924.5 bits: 177.1 E(32554): 3.5e-45
Smith-Waterman score: 959; 100.0% identity (100.0% similar) in 149 aa overlap (1-149:1-149)
10 20 30 40 50 60
pF1KB4 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE
70 80 90 100 110 120
130 140
pF1KB4 EVDEMIREADIDGDGQVNYEEFVQMMTAK
:::::::::::::::::::::::::::::
CCDS33 EVDEMIREADIDGDGQVNYEEFVQMMTAK
130 140
>>CCDS9892.1 CALM1 gene_id:801|Hs108|chr14 (149 aa)
initn: 959 init1: 959 opt: 959 Z-score: 924.5 bits: 177.1 E(32554): 3.5e-45
Smith-Waterman score: 959; 100.0% identity (100.0% similar) in 149 aa overlap (1-149:1-149)
10 20 30 40 50 60
pF1KB4 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS98 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS98 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE
70 80 90 100 110 120
130 140
pF1KB4 EVDEMIREADIDGDGQVNYEEFVQMMTAK
:::::::::::::::::::::::::::::
CCDS98 EVDEMIREADIDGDGQVNYEEFVQMMTAK
130 140
>>CCDS7069.1 CALML3 gene_id:810|Hs108|chr10 (149 aa)
initn: 1059 init1: 855 opt: 855 Z-score: 826.7 bits: 159.0 E(32554): 9.9e-40
Smith-Waterman score: 855; 84.6% identity (96.0% similar) in 149 aa overlap (1-149:1-149)
10 20 30 40 50 60
pF1KB4 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG
:::::::::..::::::::::::::: :::.::::::::::::::::::.::..:.: ::
CCDS70 MADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE
:::.:::::: ::::::::::.:::::::::::::::::..:::::::::: :::::.::
CCDS70 NGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDE
70 80 90 100 110 120
130 140
pF1KB4 EVDEMIREADIDGDGQVNYEEFVQMMTAK
::::::: :: ::::::::::::.....:
CCDS70 EVDEMIRAADTDGDGQVNYEEFVRVLVSK
130 140
>>CCDS13375.1 TNNC2 gene_id:7125|Hs108|chr20 (160 aa)
initn: 529 init1: 324 opt: 532 Z-score: 522.7 bits: 102.8 E(32554): 8.6e-23
Smith-Waterman score: 532; 53.1% identity (83.4% similar) in 145 aa overlap (5-146:12-156)
10 20 30 40 50
pF1KB4 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI
:.::.::::: ::..:: :: : :..:::::::: :::.::. ::. .:
CCDS13 MTDQQAEARSYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAII
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB4 NEVDADGNGTIDFPEFLTMMARKMKDT---DSEEEIREAFRVFDKDGNGYISAAELRHVM
.::: ::.::::: :::.::.:.::. ::::. : ::.::....:::. :: ...
CCDS13 EEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDPEELAEIF
70 80 90 100 110 120
120 130 140
pF1KB4 TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK
::..::::.. .....: ..::.....::..::
CCDS13 RASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMMEGVQ
130 140 150 160
>>CCDS2857.1 TNNC1 gene_id:7134|Hs108|chr3 (161 aa)
initn: 521 init1: 267 opt: 512 Z-score: 503.8 bits: 99.4 E(32554): 9.6e-22
Smith-Waterman score: 512; 52.0% identity (80.4% similar) in 148 aa overlap (3-146:10-157)
10 20 30 40 50
pF1KB4 MADQLTEEQIAEFKEAFSLFDKDG-DGTITTKELGTVMRSLGQNPTEAELQDM
.:::::: ::: ::..: . :: :.::::: ::: :::::: :::.:
CCDS28 MDDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEM
10 20 30 40 50 60
60 70 80 90 100
pF1KB4 INEVDADGNGTIDFPEFLTMMARKMKDTD---SEEEIREAFRVFDKDGNGYISAAELRHV
:.::: ::.::.:: :::.::.: ::: . ::::. . ::.:::...:::. ::. .
CCDS28 IDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIM
70 80 90 100 110 120
110 120 130 140
pF1KB4 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK
. :: .:.....:.....: ..::...:.::...:
CCDS28 LQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGVE
130 140 150 160
>>CCDS11820.1 CETN1 gene_id:1068|Hs108|chr18 (172 aa)
initn: 601 init1: 500 opt: 502 Z-score: 494.1 bits: 97.6 E(32554): 3.4e-21
Smith-Waterman score: 502; 54.5% identity (83.2% similar) in 143 aa overlap (4-146:24-166)
10 20 30 40
pF1KB4 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL
.:::.: : .:::.::: ::.::: .::: ..::.:
CCDS11 MASGFKKPSAASTGQKRKVAPKPELTEDQKQEVREAFDLFDVDGSGTIDAKELKVAMRAL
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB4 GQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY
: .: . :.. ::.::: .:.: :.: .::..:..::.. :..::: .:::.:: : .:
CCDS11 GFEPRKEEMKKMISEVDREGTGKISFNDFLAVMTQKMSEKDTKEEILKAFRLFDDDETGK
70 80 90 100 110 120
110 120 130 140
pF1KB4 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK
:: .:..: ..:::.:::::..::: ::: ::::.:: :::...:
CCDS11 ISFKNLKRVANELGENLTDEELQEMIDEADRDGDGEVNEEEFLRIMKKTSLY
130 140 150 160 170
>>CCDS14716.1 CETN2 gene_id:1069|Hs108|chrX (172 aa)
initn: 599 init1: 494 opt: 496 Z-score: 488.4 bits: 96.6 E(32554): 6.9e-21
Smith-Waterman score: 496; 52.4% identity (82.5% similar) in 143 aa overlap (4-146:24-166)
10 20 30 40
pF1KB4 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL
.::::: :..:::.::: :: ::: .::: ..::.:
CCDS14 MASNFKKANMASSSQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRAL
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB4 GQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY
: .: . :.. ::.:.: .:.: ..: .:::.:..::.. :..::: .::..:: : .:
CCDS14 GFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGK
70 80 90 100 110 120
110 120 130 140
pF1KB4 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK
:: .:..: .:::.:::::..::: ::: ::::.:. .::...:
CCDS14 ISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTSLY
130 140 150 160 170
>>CCDS7068.1 CALML5 gene_id:51806|Hs108|chr10 (146 aa)
initn: 524 init1: 253 opt: 494 Z-score: 487.4 bits: 96.2 E(32554): 7.9e-21
Smith-Waterman score: 494; 51.4% identity (83.6% similar) in 146 aa overlap (1-146:1-143)
10 20 30 40 50 60
pF1KB4 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG
:: .:: :. :..:.::: : ::.:::...:::..... :.: .::.:. .:.:::.::
CCDS70 MAGELTPEEEAQYKKAFSAVDTDGNGTINAQELGAALKATGKNLSEAQLRKLISEVDSDG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE
.: :.: :::: :.: . . :... :::.::.::.:.:.. :::..:..::. : .:
CCDS70 DGEISFQEFLTA-AKKARA--GLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQE
70 80 90 100 110
130 140
pF1KB4 EVDEMIREADIDGDGQVNYEEFVQMMTAK
:.: ::::::.: ::.::::::..:.
CCDS70 ELDAMIREADVDQDGRVNYEEFARMLAQE
120 130 140
>>CCDS30566.1 CALML6 gene_id:163688|Hs108|chr1 (181 aa)
initn: 415 init1: 228 opt: 440 Z-score: 435.5 bits: 86.9 E(32554): 6.2e-18
Smith-Waterman score: 440; 45.3% identity (75.3% similar) in 150 aa overlap (1-149:26-175)
10 20 30
pF1KB4 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGT
:...:. ::: :.: .: .::..:.: . : ::
CCDS30 MGLQQEISLQPWCHHPAESCQTTTDMTERLSAEQIKEYKGVFEMFDEEGNGEVKTGELEW
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB4 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA-RKMKDTDSEEEIREAFRVFD
.: :: :::..:: .: ..:: :..: .. ::..:. . : ..: :.: ::::::
CCDS30 LMSLLGINPTKSELASMAKDVDRDNKGFFNCDGFLALMGVYHEKAQNQESELRAAFRVFD
70 80 90 100 110 120
100 110 120 130 140
pF1KB4 KDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK
:.:.:::. :..:. : :: :.. :...:..::: ::: ..::::: :::..
CCDS30 KEGKGYIDWNTLKYVLMNAGEPLNEVEAEQMMKEADKDGDRTIDYEEFVAMMTGESFKLI
130 140 150 160 170 180
CCDS30 Q
149 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 15:02:38 2016 done: Thu Nov 3 15:02:38 2016
Total Scan time: 1.490 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]