Result of FASTA (omim) for
pF1KB4614
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB4614, 596 aa
1>>>pF1KB4614 596 - 596 aa - 596 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.7293+/-0.000461; mu= -10.8580+/- 0.029
mean_var=353.5402+/-74.958, 0's: 0 Z-trim(119.4): 359 B-trim: 777 in 1/59
Lambda= 0.068211
statistics sampled from 32952 (33315) to 32952 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.719), E-opt: 0.2 (0.391), width: 16
Scan time: 11.190
The best scores are: opt bits E(85289)
NP_006448 (OMIM: 605904) PDZ and LIM domain protei ( 596) 4052 413.1 1.4e-114
XP_016863146 (OMIM: 605904) PREDICTED: PDZ and LIM ( 602) 4025 410.4 8.7e-114
NP_001243357 (OMIM: 605904) PDZ and LIM domain pro ( 474) 3251 334.2 6.1e-91
NP_001011513 (OMIM: 605904) PDZ and LIM domain pro ( 487) 2720 281.9 3.3e-75
XP_005262755 (OMIM: 605904) PREDICTED: PDZ and LIM ( 493) 2693 279.3 2.1e-74
XP_011529845 (OMIM: 605904) PREDICTED: PDZ and LIM ( 600) 2659 276.0 2.5e-73
NP_001243356 (OMIM: 605904) PDZ and LIM domain pro ( 483) 2623 272.4 2.5e-72
XP_006714132 (OMIM: 605904) PREDICTED: PDZ and LIM ( 607) 2573 267.5 9e-71
XP_016863147 (OMIM: 605904) PREDICTED: PDZ and LIM ( 498) 2519 262.2 3.1e-69
NP_001243355 (OMIM: 605904) PDZ and LIM domain pro ( 625) 2058 216.9 1.7e-55
XP_006714133 (OMIM: 605904) PREDICTED: PDZ and LIM ( 605) 2053 216.4 2.3e-55
XP_005262753 (OMIM: 605904) PREDICTED: PDZ and LIM ( 619) 2053 216.4 2.3e-55
XP_006714131 (OMIM: 605904) PREDICTED: PDZ and LIM ( 630) 2053 216.4 2.4e-55
XP_005262752 (OMIM: 605904) PREDICTED: PDZ and LIM ( 728) 2053 216.4 2.6e-55
XP_005262750 (OMIM: 605904) PREDICTED: PDZ and LIM ( 734) 2053 216.4 2.7e-55
XP_006714129 (OMIM: 605904) PREDICTED: PDZ and LIM ( 739) 2053 216.4 2.7e-55
NP_001243354 (OMIM: 605904) PDZ and LIM domain pro ( 271) 1934 204.4 4e-52
XP_011537487 (OMIM: 605906,609452) PREDICTED: LIM ( 811) 1176 130.1 2.8e-29
XP_011537486 (OMIM: 605906,609452) PREDICTED: LIM ( 811) 1176 130.1 2.8e-29
XP_011537491 (OMIM: 605906,609452) PREDICTED: LIM ( 696) 1145 127.0 2e-28
XP_011537493 (OMIM: 605906,609452) PREDICTED: LIM ( 633) 1136 126.1 3.5e-28
XP_011537495 (OMIM: 605906,609452) PREDICTED: LIM ( 463) 1132 125.6 3.5e-28
XP_016871096 (OMIM: 605906,609452) PREDICTED: LIM ( 463) 1132 125.6 3.5e-28
XP_016871095 (OMIM: 605906,609452) PREDICTED: LIM ( 743) 1136 126.2 3.9e-28
XP_011537490 (OMIM: 605906,609452) PREDICTED: LIM ( 743) 1136 126.2 3.9e-28
XP_011537492 (OMIM: 605906,609452) PREDICTED: LIM ( 680) 1126 125.2 7.2e-28
XP_005269521 (OMIM: 605906,609452) PREDICTED: LIM ( 727) 1126 125.2 7.6e-28
NP_009009 (OMIM: 605906,609452) LIM domain-binding ( 727) 1126 125.2 7.6e-28
XP_011537488 (OMIM: 605906,609452) PREDICTED: LIM ( 795) 1126 125.2 8.2e-28
XP_011537496 (OMIM: 605906,609452) PREDICTED: LIM ( 400) 1109 123.3 1.5e-27
NP_001073583 (OMIM: 605906,609452) LIM domain-bind ( 617) 1109 123.5 2.1e-27
XP_005269523 (OMIM: 605906,609452) PREDICTED: LIM ( 664) 1109 123.5 2.3e-27
NP_001165081 (OMIM: 605906,609452) LIM domain-bind ( 732) 1109 123.5 2.5e-27
XP_011537489 (OMIM: 605906,609452) PREDICTED: LIM ( 748) 1109 123.5 2.5e-27
XP_011533001 (OMIM: 605903) PREDICTED: PDZ and LIM ( 309) 890 101.7 3.8e-21
XP_011533000 (OMIM: 605903) PREDICTED: PDZ and LIM ( 364) 890 101.8 4.3e-21
NP_976227 (OMIM: 605903) PDZ and LIM domain protei ( 423) 890 101.8 4.9e-21
NP_005442 (OMIM: 605903) PDZ and LIM domain protei ( 457) 890 101.8 5.2e-21
NP_001011516 (OMIM: 605904) PDZ and LIM domain pro ( 214) 644 77.4 5.5e-14
NP_001011515 (OMIM: 605904) PDZ and LIM domain pro ( 234) 644 77.4 5.9e-14
NP_057011 (OMIM: 602353) transforming growth facto ( 444) 609 74.2 1.1e-12
NP_001158191 (OMIM: 602353) transforming growth fa ( 444) 609 74.2 1.1e-12
NP_001035919 (OMIM: 602353) transforming growth fa ( 461) 609 74.2 1.1e-12
XP_016871097 (OMIM: 605906,609452) PREDICTED: LIM ( 330) 560 69.3 2.4e-11
NP_001073584 (OMIM: 605906,609452) LIM domain-bind ( 330) 560 69.3 2.4e-11
XP_005269525 (OMIM: 605906,609452) PREDICTED: LIM ( 330) 560 69.3 2.4e-11
XP_006718813 (OMIM: 605390) PREDICTED: leupaxin is ( 290) 557 68.9 2.6e-11
XP_011543693 (OMIM: 605390) PREDICTED: leupaxin is ( 366) 557 69.0 3.2e-11
XP_011543690 (OMIM: 605390) PREDICTED: leupaxin is ( 366) 557 69.0 3.2e-11
NP_001294880 (OMIM: 605390) leupaxin isoform 3 [Ho ( 366) 557 69.0 3.2e-11
>>NP_006448 (OMIM: 605904) PDZ and LIM domain protein 5 (596 aa)
initn: 4052 init1: 4052 opt: 4052 Z-score: 2178.3 bits: 413.1 E(85289): 1.4e-114
Smith-Waterman score: 4052; 99.7% identity (100.0% similar) in 596 aa overlap (1-596:1-596)
10 20 30 40 50 60
pF1KB4 MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 MTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQKGEPKEVVKPVPITSPAVSKVTST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQKGEPKEVVKPVPITSPAVSKVTST
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 NNMAYNKAPRPFGSVSSPKVTSIPSPSSAFTPAHATTSSHASPSPVAAVTPPLFAASGLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 NNMAYNKAPRPFGSVSSPKVTSIPSPSSAFTPAHATTSSHASPSPVAAVTPPLFAASGLH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 ANANLSADQSPSALSAGKTAVNVPRQPTVTSVCSETSQELAEGQRRGSQGDSKQQNGPPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 ANANLSADQSPSALSAGKTAVNVPRQPTVTSVCSETSQELAEGQRRGSQGDSKQQNGPPR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 KHIVERYTEFYHVPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQITGTEHLKESEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 KHIVERYTEFYHVPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQITGTEHLKESEA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 DNTKKANNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTSLTTAAAFKPVGSTGVIKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 DNTKKANNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTSLTTAAAFKPVGSTGVIKS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB4 PSWQRPNQGVPSTGRISNSAAYSGSVAPANSALGQTQPSDQDTLVQRAEHIPAGKRTPMC
::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::
NP_006 PSWQRPNQGVPSTGRISNSATYSGSVAPANSALGQTQPSDQDTLVQRAEHIPAGKRTPMC
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB4 AHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFAPECG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 AHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFAPECG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB4 RCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGTICHG
:::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 RCQRKILGEVISALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGTICHG
490 500 510 520 530 540
550 560 570 580 590
pF1KB4 CEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAHSVNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 CEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAHSVNF
550 560 570 580 590
>>XP_016863146 (OMIM: 605904) PREDICTED: PDZ and LIM dom (602 aa)
initn: 4033 init1: 2503 opt: 4025 Z-score: 2163.8 bits: 410.4 E(85289): 8.7e-114
Smith-Waterman score: 4025; 98.5% identity (99.0% similar) in 602 aa overlap (1-596:1-602)
10 20 30 40 50 60
pF1KB4 MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 MTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQKGEPKEVVKPVPITSPAVSKVTST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQKGEPKEVVKPVPITSPAVSKVTST
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 NNMAYNKAPRPFGSVSSPKVTSIPSPSSAFTPAHATTSSHASPSPVAAVTPPLFAASGLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NNMAYNKAPRPFGSVSSPKVTSIPSPSSAFTPAHATTSSHASPSPVAAVTPPLFAASGLH
130 140 150 160 170 180
190 200 210 220 230
pF1KB4 ANANLSADQSPSALSAGKTAVNVPRQPTVTSVCSETSQELAEGQRRGSQGDSKQQNG---
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ANANLSADQSPSALSAGKTAVNVPRQPTVTSVCSETSQELAEGQRRGSQGDSKQQNGKIP
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB4 ---PPRKHIVERYTEFYHVPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQITGTEH
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PKRPPRKHIVERYTEFYHVPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQITGTEH
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB4 LKESEADNTKKANNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTSLTTAAAFKPVGS
::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::
XP_016 LKESEADNTKKANNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTSLTAAAAFKPVGS
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB4 TGVIKSPSWQRPNQGVPSTGRISNSAAYSGSVAPANSALGQTQPSDQDTLVQRAEHIPAG
::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::
XP_016 TGVIKSPSWQRPNQGVPSTGRISNSATYSGSVAPANSALGQTQPSDQDTLVQRAEHIPAG
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB4 KRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKF
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB4 FAPECGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALF
:::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::
XP_016 FAPECGRCQRKILGEVISALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALF
490 500 510 520 530 540
540 550 560 570 580 590
pF1KB4 GTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAHSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAHSV
550 560 570 580 590 600
pF1KB4 NF
::
XP_016 NF
>>NP_001243357 (OMIM: 605904) PDZ and LIM domain protein (474 aa)
initn: 3251 init1: 3251 opt: 3251 Z-score: 1753.7 bits: 334.2 E(85289): 6.1e-91
Smith-Waterman score: 3251; 99.6% identity (100.0% similar) in 474 aa overlap (123-596:1-474)
100 110 120 130 140 150
pF1KB4 VPVQKGEPKEVVKPVPITSPAVSKVTSTNNMAYNKAPRPFGSVSSPKVTSIPSPSSAFTP
::::::::::::::::::::::::::::::
NP_001 MAYNKAPRPFGSVSSPKVTSIPSPSSAFTP
10 20 30
160 170 180 190 200 210
pF1KB4 AHATTSSHASPSPVAAVTPPLFAASGLHANANLSADQSPSALSAGKTAVNVPRQPTVTSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AHATTSSHASPSPVAAVTPPLFAASGLHANANLSADQSPSALSAGKTAVNVPRQPTVTSV
40 50 60 70 80 90
220 230 240 250 260 270
pF1KB4 CSETSQELAEGQRRGSQGDSKQQNGPPRKHIVERYTEFYHVPTHSDASKKRLIEDTEDWR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CSETSQELAEGQRRGSQGDSKQQNGPPRKHIVERYTEFYHVPTHSDASKKRLIEDTEDWR
100 110 120 130 140 150
280 290 300 310 320 330
pF1KB4 PRTGTTQSRSFRILAQITGTEHLKESEADNTKKANNSQEPSPQLASSVASTRSMPESLDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PRTGTTQSRSFRILAQITGTEHLKESEADNTKKANNSQEPSPQLASSVASTRSMPESLDS
160 170 180 190 200 210
340 350 360 370 380 390
pF1KB4 PTSGRPGVTSLTTAAAFKPVGSTGVIKSPSWQRPNQGVPSTGRISNSAAYSGSVAPANSA
::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::
NP_001 PTSGRPGVTSLTTAAAFKPVGSTGVIKSPSWQRPNQGVPSTGRISNSATYSGSVAPANSA
220 230 240 250 260 270
400 410 420 430 440 450
pF1KB4 LGQTQPSDQDTLVQRAEHIPAGKRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGQTQPSDQDTLVQRAEHIPAGKRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNT
280 290 300 310 320 330
460 470 480 490 500 510
pF1KB4 MAYIGFVEEKGALYCELCYEKFFAPECGRCQRKILGEVINALKQTWHVSCFVCVACGKPI
:::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::
NP_001 MAYIGFVEEKGALYCELCYEKFFAPECGRCQRKILGEVISALKQTWHVSCFVCVACGKPI
340 350 360 370 380 390
520 530 540 550 560 570
pF1KB4 RNNVFHLEDGEPYCETDYYALFGTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RNNVFHLEDGEPYCETDYYALFGTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCES
400 410 420 430 440 450
580 590
pF1KB4 LEGQTFFSKKDKPLCKKHAHSVNF
::::::::::::::::::::::::
NP_001 LEGQTFFSKKDKPLCKKHAHSVNF
460 470
>>NP_001011513 (OMIM: 605904) PDZ and LIM domain protein (487 aa)
initn: 2714 init1: 2714 opt: 2720 Z-score: 1471.1 bits: 281.9 E(85289): 3.3e-75
Smith-Waterman score: 3127; 81.4% identity (81.7% similar) in 596 aa overlap (1-596:1-487)
10 20 30 40 50 60
pF1KB4 MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 MTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQKGEPKEVVKPVPITSPAVSKVTST
:::::::::::::::::::::::::::::::::::::
NP_001 MTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQK-----------------------
70 80 90
130 140 150 160 170 180
pF1KB4 NNMAYNKAPRPFGSVSSPKVTSIPSPSSAFTPAHATTSSHASPSPVAAVTPPLFAASGLH
NP_001 ------------------------------------------------------------
190 200 210 220 230 240
pF1KB4 ANANLSADQSPSALSAGKTAVNVPRQPTVTSVCSETSQELAEGQRRGSQGDSKQQNGPPR
::::::::::::::::::::::::::::::::::
NP_001 --------------------------PTVTSVCSETSQELAEGQRRGSQGDSKQQNGPPR
100 110 120 130
250 260 270 280 290 300
pF1KB4 KHIVERYTEFYHVPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQITGTEHLKESEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KHIVERYTEFYHVPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQITGTEHLKESEA
140 150 160 170 180 190
310 320 330 340 350 360
pF1KB4 DNTKKANNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTSLTTAAAFKPVGSTGVIKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DNTKKANNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTSLTTAAAFKPVGSTGVIKS
200 210 220 230 240 250
370 380 390 400 410 420
pF1KB4 PSWQRPNQGVPSTGRISNSAAYSGSVAPANSALGQTQPSDQDTLVQRAEHIPAGKRTPMC
::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::
NP_001 PSWQRPNQGVPSTGRISNSATYSGSVAPANSALGQTQPSDQDTLVQRAEHIPAGKRTPMC
260 270 280 290 300 310
430 440 450 460 470 480
pF1KB4 AHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFAPECG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFAPECG
320 330 340 350 360 370
490 500 510 520 530 540
pF1KB4 RCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGTICHG
:::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RCQRKILGEVISALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGTICHG
380 390 400 410 420 430
550 560 570 580 590
pF1KB4 CEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAHSVNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAHSVNF
440 450 460 470 480
>>XP_005262755 (OMIM: 605904) PREDICTED: PDZ and LIM dom (493 aa)
initn: 3133 init1: 2503 opt: 2693 Z-score: 1456.7 bits: 279.3 E(85289): 2.1e-74
Smith-Waterman score: 3100; 80.4% identity (80.9% similar) in 602 aa overlap (1-596:1-493)
10 20 30 40 50 60
pF1KB4 MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 MTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQKGEPKEVVKPVPITSPAVSKVTST
:::::::::::::::::::::::::::::::::::::
XP_005 MTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQK-----------------------
70 80 90
130 140 150 160 170 180
pF1KB4 NNMAYNKAPRPFGSVSSPKVTSIPSPSSAFTPAHATTSSHASPSPVAAVTPPLFAASGLH
XP_005 ------------------------------------------------------------
190 200 210 220 230
pF1KB4 ANANLSADQSPSALSAGKTAVNVPRQPTVTSVCSETSQELAEGQRRGSQGDSKQQNG---
:::::::::::::::::::::::::::::::
XP_005 --------------------------PTVTSVCSETSQELAEGQRRGSQGDSKQQNGKIP
100 110 120 130
240 250 260 270 280 290
pF1KB4 ---PPRKHIVERYTEFYHVPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQITGTEH
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PKRPPRKHIVERYTEFYHVPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQITGTEH
140 150 160 170 180 190
300 310 320 330 340 350
pF1KB4 LKESEADNTKKANNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTSLTTAAAFKPVGS
::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::
XP_005 LKESEADNTKKANNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTSLTAAAAFKPVGS
200 210 220 230 240 250
360 370 380 390 400 410
pF1KB4 TGVIKSPSWQRPNQGVPSTGRISNSAAYSGSVAPANSALGQTQPSDQDTLVQRAEHIPAG
::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::
XP_005 TGVIKSPSWQRPNQGVPSTGRISNSATYSGSVAPANSALGQTQPSDQDTLVQRAEHIPAG
260 270 280 290 300 310
420 430 440 450 460 470
pF1KB4 KRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKF
320 330 340 350 360 370
480 490 500 510 520 530
pF1KB4 FAPECGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALF
:::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::
XP_005 FAPECGRCQRKILGEVISALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALF
380 390 400 410 420 430
540 550 560 570 580 590
pF1KB4 GTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAHSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAHSV
440 450 460 470 480 490
pF1KB4 NF
::
XP_005 NF
>>XP_011529845 (OMIM: 605904) PREDICTED: PDZ and LIM dom (600 aa)
initn: 2683 init1: 2053 opt: 2659 Z-score: 1437.4 bits: 276.0 E(85289): 2.5e-73
Smith-Waterman score: 2661; 69.4% identity (80.5% similar) in 611 aa overlap (1-596:1-600)
10 20 30 40 50 60
pF1KB4 MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 MTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQKGEPKEVVKPVPITSPAVSKVTST
::::::::::::::::::::::::::::::::::::: .:.: .: : ....
XP_011 MTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQK--KTQVTKKIPPKRPPRKHIVER
70 80 90 100 110
130 140 150 160 170 180
pF1KB4 NNMAYNKAPRPFGSVSSPKVTSIPSPSSAFTPAHATTSSHASPSPVAAVTPPLFAASGLH
. :. : : .: : . . . : .::.:. : .: .: . .
XP_011 YTEFYHV---PTHSDASKK--RLIEDTEDWRPRTGTTQSR-SFRILAQITGTEHLKES-E
120 130 140 150 160 170
190 200 210 220 230
pF1KB4 ANANLSADQSPSAL-SAGKTAVNVPRQPTVTSVCSETSQELAEGQRRGSQGDSKQQNGPP
:. : . . ::: . :.. . : : : .. :... :.. :. .:. :
XP_011 AD-NTKKAKFDSALEDLPKSGPHPPATPQVLTIGSQVAT-LSKVATTYSSLSSSTGNVED
180 190 200 210 220
240 250 260 270 280
pF1KB4 RKHIVERYTEF-----YHVPTHSDAS---KKRLIEDTEDWRPRTGTTQSRSFRI--LAQI
. . .. : : . . :.:. . . :. . :. . .. : ...
XP_011 SFEGFRNFSTFSSPARYSAAVLSSAAATVSAVIATKTRLYTPERYHSLLDALCISPVSKP
230 240 250 260 270 280
290 300 310 320 330 340
pF1KB4 TGTEHLKESEAD----NTKKANNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTSLTT
. .:. :. . ..::..:::::::::::::::::::::::::::::::::::::.
XP_011 LAFSYLQSSRKSTGSIHVKKTSNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTSLTA
290 300 310 320 330 340
350 360 370 380 390 400
pF1KB4 AAAFKPVGSTGVIKSPSWQRPNQGVPSTGRISNSAAYSGSVAPANSALGQTQPSDQDTLV
:::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::
XP_011 AAAFKPVGSTGVIKSPSWQRPNQGVPSTGRISNSATYSGSVAPANSALGQTQPSDQDTLV
350 360 370 380 390 400
410 420 430 440 450 460
pF1KB4 QRAEHIPAGKRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QRAEHIPAGKRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGAL
410 420 430 440 450 460
470 480 490 500 510 520
pF1KB4 YCELCYEKFFAPECGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPY
::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::
XP_011 YCELCYEKFFAPECGRCQRKILGEVISALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPY
470 480 490 500 510 520
530 540 550 560 570 580
pF1KB4 CETDYYALFGTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CETDYYALFGTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKP
530 540 550 560 570 580
590
pF1KB4 LCKKHAHSVNF
:::::::::::
XP_011 LCKKHAHSVNF
590 600
>>NP_001243356 (OMIM: 605904) PDZ and LIM domain protein (483 aa)
initn: 3063 init1: 2433 opt: 2623 Z-score: 1419.6 bits: 272.4 E(85289): 2.5e-72
Smith-Waterman score: 3030; 80.2% identity (80.6% similar) in 592 aa overlap (1-586:1-483)
10 20 30 40 50 60
pF1KB4 MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 MTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQKGEPKEVVKPVPITSPAVSKVTST
:::::::::::::::::::::::::::::::::::::
NP_001 MTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQK-----------------------
70 80 90
130 140 150 160 170 180
pF1KB4 NNMAYNKAPRPFGSVSSPKVTSIPSPSSAFTPAHATTSSHASPSPVAAVTPPLFAASGLH
NP_001 ------------------------------------------------------------
190 200 210 220 230
pF1KB4 ANANLSADQSPSALSAGKTAVNVPRQPTVTSVCSETSQELAEGQRRGSQGDSKQQNG---
:::::::::::::::::::::::::::::::
NP_001 --------------------------PTVTSVCSETSQELAEGQRRGSQGDSKQQNGKIP
100 110 120 130
240 250 260 270 280 290
pF1KB4 ---PPRKHIVERYTEFYHVPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQITGTEH
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PKRPPRKHIVERYTEFYHVPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQITGTEH
140 150 160 170 180 190
300 310 320 330 340 350
pF1KB4 LKESEADNTKKANNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTSLTTAAAFKPVGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKESEADNTKKANNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTSLTTAAAFKPVGS
200 210 220 230 240 250
360 370 380 390 400 410
pF1KB4 TGVIKSPSWQRPNQGVPSTGRISNSAAYSGSVAPANSALGQTQPSDQDTLVQRAEHIPAG
::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::
NP_001 TGVIKSPSWQRPNQGVPSTGRISNSATYSGSVAPANSALGQTQPSDQDTLVQRAEHIPAG
260 270 280 290 300 310
420 430 440 450 460 470
pF1KB4 KRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKF
320 330 340 350 360 370
480 490 500 510 520 530
pF1KB4 FAPECGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALF
:::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::
NP_001 FAPECGRCQRKILGEVISALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALF
380 390 400 410 420 430
540 550 560 570 580 590
pF1KB4 GTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAHSV
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPL
440 450 460 470 480
pF1KB4 NF
>>XP_006714132 (OMIM: 605904) PREDICTED: PDZ and LIM dom (607 aa)
initn: 2503 init1: 2503 opt: 2573 Z-score: 1391.6 bits: 267.5 E(85289): 9e-71
Smith-Waterman score: 4015; 97.7% identity (98.2% similar) in 607 aa overlap (1-596:1-607)
10 20 30 40 50 60
pF1KB4 MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 MTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQKGEPKEVVKPVPITSPAVSKVTST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQKGEPKEVVKPVPITSPAVSKVTST
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 NNMAYNKAPRPFGSVSSPKVTSIPSPSSAFTPAHATTSSHASPSPVAAVTPPLFAASGLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NNMAYNKAPRPFGSVSSPKVTSIPSPSSAFTPAHATTSSHASPSPVAAVTPPLFAASGLH
130 140 150 160 170 180
190 200 210 220 230
pF1KB4 ANANLSADQSPSALSAGKTAVNVPRQPTVTSVCSETSQELAEGQRRGSQGDSKQQNG---
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ANANLSADQSPSALSAGKTAVNVPRQPTVTSVCSETSQELAEGQRRGSQGDSKQQNGNPG
190 200 210 220 230 240
240 250 260 270 280
pF1KB4 --------PPRKHIVERYTEFYHVPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQI
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TVKIPPKRPPRKHIVERYTEFYHVPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQI
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB4 TGTEHLKESEADNTKKANNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTSLTTAAAF
:::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::
XP_006 TGTEHLKESEADNTKKANNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTSLTAAAAF
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB4 KPVGSTGVIKSPSWQRPNQGVPSTGRISNSAAYSGSVAPANSALGQTQPSDQDTLVQRAE
:::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
XP_006 KPVGSTGVIKSPSWQRPNQGVPSTGRISNSATYSGSVAPANSALGQTQPSDQDTLVQRAE
370 380 390 400 410 420
410 420 430 440 450 460
pF1KB4 HIPAGKRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 HIPAGKRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCEL
430 440 450 460 470 480
470 480 490 500 510 520
pF1KB4 CYEKFFAPECGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETD
::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::
XP_006 CYEKFFAPECGRCQRKILGEVISALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETD
490 500 510 520 530 540
530 540 550 560 570 580
pF1KB4 YYALFGTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 YYALFGTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKK
550 560 570 580 590 600
590
pF1KB4 HAHSVNF
:::::::
XP_006 HAHSVNF
>>XP_016863147 (OMIM: 605904) PREDICTED: PDZ and LIM dom (498 aa)
initn: 3133 init1: 2503 opt: 2519 Z-score: 1364.1 bits: 262.2 E(85289): 3.1e-69
Smith-Waterman score: 3090; 79.7% identity (80.2% similar) in 607 aa overlap (1-596:1-498)
10 20 30 40 50 60
pF1KB4 MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 MTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQKGEPKEVVKPVPITSPAVSKVTST
:::::::::::::::::::::::::::::::::::::
XP_016 MTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQK-----------------------
70 80 90
130 140 150 160 170 180
pF1KB4 NNMAYNKAPRPFGSVSSPKVTSIPSPSSAFTPAHATTSSHASPSPVAAVTPPLFAASGLH
XP_016 ------------------------------------------------------------
190 200 210 220 230
pF1KB4 ANANLSADQSPSALSAGKTAVNVPRQPTVTSVCSETSQELAEGQRRGSQGDSKQQNG---
:::::::::::::::::::::::::::::::
XP_016 --------------------------PTVTSVCSETSQELAEGQRRGSQGDSKQQNGNPG
100 110 120 130
240 250 260 270 280
pF1KB4 --------PPRKHIVERYTEFYHVPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQI
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TVKIPPKRPPRKHIVERYTEFYHVPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQI
140 150 160 170 180 190
290 300 310 320 330 340
pF1KB4 TGTEHLKESEADNTKKANNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTSLTTAAAF
:::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::
XP_016 TGTEHLKESEADNTKKANNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTSLTAAAAF
200 210 220 230 240 250
350 360 370 380 390 400
pF1KB4 KPVGSTGVIKSPSWQRPNQGVPSTGRISNSAAYSGSVAPANSALGQTQPSDQDTLVQRAE
:::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
XP_016 KPVGSTGVIKSPSWQRPNQGVPSTGRISNSATYSGSVAPANSALGQTQPSDQDTLVQRAE
260 270 280 290 300 310
410 420 430 440 450 460
pF1KB4 HIPAGKRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HIPAGKRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCEL
320 330 340 350 360 370
470 480 490 500 510 520
pF1KB4 CYEKFFAPECGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETD
::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::
XP_016 CYEKFFAPECGRCQRKILGEVISALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETD
380 390 400 410 420 430
530 540 550 560 570 580
pF1KB4 YYALFGTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YYALFGTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKK
440 450 460 470 480 490
590
pF1KB4 HAHSVNF
:::::::
XP_016 HAHSVNF
>>NP_001243355 (OMIM: 605904) PDZ and LIM domain protein (625 aa)
initn: 2688 init1: 2058 opt: 2058 Z-score: 1117.5 bits: 216.9 E(85289): 1.7e-55
Smith-Waterman score: 2825; 65.9% identity (66.3% similar) in 734 aa overlap (1-596:1-625)
10 20 30 40 50 60
pF1KB4 MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 MTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQKGEPKEVVKPVPITSPAVSKVTST
:::::::::::::::::::::::::::::::::::::
NP_001 MTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQK-----------------------
70 80 90
130 140 150 160 170 180
pF1KB4 NNMAYNKAPRPFGSVSSPKVTSIPSPSSAFTPAHATTSSHASPSPVAAVTPPLFAASGLH
NP_001 ------------------------------------------------------------
190 200 210 220 230
pF1KB4 ANANLSADQSPSALSAGKTAVNVPRQPTVTSVCSETSQELAEGQRRGSQGDSKQQNG---
:::::::::::::::::::::::::::::::
NP_001 --------------------------PTVTSVCSETSQELAEGQRRGSQGDSKQQNGKIP
100 110 120 130
240 250 260 270 280 290
pF1KB4 ---PPRKHIVERYTEFYHVPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQITGTEH
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PKRPPRKHIVERYTEFYHVPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQITGTEH
140 150 160 170 180 190
300
pF1KB4 LKESEADNTKKA------------------------------------------------
::::::::::::
NP_001 LKESEADNTKKAKFDSALEDLPKSGPHPPATPQVLTIGSQVATLSKVATTYSSLSSSTGN
200 210 220 230 240 250
pF1KB4 ------------------------------------------------------------
NP_001 VEDSFEGFRNFSTFSSPARYSAAVLSSAAATVSAVIATKTRLYTPERYHSLLDALCISPV
260 270 280 290 300 310
310 320 330 340
pF1KB4 ------------------------NNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTS
.:::::::::::::::::::::::::::::::::::
NP_001 SKPLAFSYLQSSRKSTGSIHVKKTSNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTS
320 330 340 350 360 370
350 360 370 380 390 400
pF1KB4 LTTAAAFKPVGSTGVIKSPSWQRPNQGVPSTGRISNSAAYSGSVAPANSALGQTQPSDQD
::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::
NP_001 LTTAAAFKPVGSTGVIKSPSWQRPNQGVPSTGRISNSATYSGSVAPANSALGQTQPSDQD
380 390 400 410 420 430
410 420 430 440 450 460
pF1KB4 TLVQRAEHIPAGKRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLVQRAEHIPAGKRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEK
440 450 460 470 480 490
470 480 490 500 510 520
pF1KB4 GALYCELCYEKFFAPECGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDG
:::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::
NP_001 GALYCELCYEKFFAPECGRCQRKILGEVISALKQTWHVSCFVCVACGKPIRNNVFHLEDG
500 510 520 530 540 550
530 540 550 560 570 580
pF1KB4 EPYCETDYYALFGTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EPYCETDYYALFGTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKK
560 570 580 590 600 610
590
pF1KB4 DKPLCKKHAHSVNF
::::::::::::::
NP_001 DKPLCKKHAHSVNF
620
596 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 21:55:40 2016 done: Sat Nov 5 21:55:41 2016
Total Scan time: 11.190 Total Display time: 0.140
Function used was FASTA [36.3.4 Apr, 2011]