Result of FASTA (omim) for
pF1KB4640
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB4640, 614 aa
1>>>pF1KB4640 614 - 614 aa - 614 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.1454+/-0.000388; mu= 15.9522+/- 0.024
mean_var=92.6930+/-17.981, 0's: 0 Z-trim(114.4): 13 B-trim: 278 in 2/51
Lambda= 0.133214
statistics sampled from 24215 (24225) to 24215 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.656), E-opt: 0.2 (0.284), width: 16
Scan time: 10.100
The best scores are: opt bits E(85289)
NP_001138735 (OMIM: 188550,601984) nuclear recepto ( 614) 4212 820.0 0
NP_005428 (OMIM: 188550,601984) nuclear receptor c ( 614) 4212 820.0 0
NP_001138734 (OMIM: 188550,601984) nuclear recepto ( 614) 4212 820.0 0
NP_001138733 (OMIM: 188550,601984) nuclear recepto ( 630) 4212 820.0 0
NP_001138732 (OMIM: 188550,601984) nuclear recepto ( 650) 4205 818.7 0
>>NP_001138735 (OMIM: 188550,601984) nuclear receptor co (614 aa)
initn: 4212 init1: 4212 opt: 4212 Z-score: 4377.1 bits: 820.0 E(85289): 0
Smith-Waterman score: 4212; 100.0% identity (100.0% similar) in 614 aa overlap (1-614:1-614)
10 20 30 40 50 60
pF1KB4 MNTFQDQSGSSSNREPLLRCSDARRDLELAIGGVLRAEQQIKDNLREVKAQIHSCISRHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNTFQDQSGSSSNREPLLRCSDARRDLELAIGGVLRAEQQIKDNLREVKAQIHSCISRHL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 ECLRSREVWLYEQVDLIYQLKEETLQQQAQQLYSLLGQFNCLTHQLECTQNKDLANQVSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ECLRSREVWLYEQVDLIYQLKEETLQQQAQQLYSLLGQFNCLTHQLECTQNKDLANQVSV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 CLERLGSLTLKPEDSTVLLFEADTITLRQTITTFGSLKTIQIPEHLMAHASSANIGPFLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CLERLGSLTLKPEDSTVLLFEADTITLRQTITTFGSLKTIQIPEHLMAHASSANIGPFLE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 KRGCISMPEQKSASGIVAVPFSEWLLGSKPASGYQAPYIPSTDPQDWLTQKQTLENSQTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRGCISMPEQKSASGIVAVPFSEWLLGSKPASGYQAPYIPSTDPQDWLTQKQTLENSQTS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 SRACNFFNNVGGNLKGLENWLLKSEKSSYQKCNSHSTTSSFSIEMEKVGDQELPDQDEMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SRACNFFNNVGGNLKGLENWLLKSEKSSYQKCNSHSTTSSFSIEMEKVGDQELPDQDEMD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 LSDWLVTPQESHKLRKPENGSRETSEKFKLLFQSYNVNDWLVKTDSCTNCQGNQPKGVEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSDWLVTPQESHKLRKPENGSRETSEKFKLLFQSYNVNDWLVKTDSCTNCQGNQPKGVEI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB4 ENLGNLKCLNDHLEAKKPLSTPSMVTEDWLVQNHQDPCKVEEVCRANEPCTSFAECVCDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENLGNLKCLNDHLEAKKPLSTPSMVTEDWLVQNHQDPCKVEEVCRANEPCTSFAECVCDE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB4 NCEKEALYKWLLKKEGKDKNGMPVEPKPEPEKHKDSLNMWLCPRKEVIEQTKAPKAMTPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NCEKEALYKWLLKKEGKDKNGMPVEPKPEPEKHKDSLNMWLCPRKEVIEQTKAPKAMTPS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB4 RIADSFQVIKNSPLSEWLIRPPYKEGSPKEVPGTEDRAGKQKFKSPMNTSWCSFNTADWV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RIADSFQVIKNSPLSEWLIRPPYKEGSPKEVPGTEDRAGKQKFKSPMNTSWCSFNTADWV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB4 LPGKKMGNLSQLSSGEDKWLLRKKAQEVLLNSPLQEEHNFPPDHYGLPAVCDLFACMQLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LPGKKMGNLSQLSSGEDKWLLRKKAQEVLLNSPLQEEHNFPPDHYGLPAVCDLFACMQLK
550 560 570 580 590 600
610
pF1KB4 VDKEKWLYRTPLQM
::::::::::::::
NP_001 VDKEKWLYRTPLQM
610
>>NP_005428 (OMIM: 188550,601984) nuclear receptor coact (614 aa)
initn: 4212 init1: 4212 opt: 4212 Z-score: 4377.1 bits: 820.0 E(85289): 0
Smith-Waterman score: 4212; 100.0% identity (100.0% similar) in 614 aa overlap (1-614:1-614)
10 20 30 40 50 60
pF1KB4 MNTFQDQSGSSSNREPLLRCSDARRDLELAIGGVLRAEQQIKDNLREVKAQIHSCISRHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MNTFQDQSGSSSNREPLLRCSDARRDLELAIGGVLRAEQQIKDNLREVKAQIHSCISRHL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 ECLRSREVWLYEQVDLIYQLKEETLQQQAQQLYSLLGQFNCLTHQLECTQNKDLANQVSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 ECLRSREVWLYEQVDLIYQLKEETLQQQAQQLYSLLGQFNCLTHQLECTQNKDLANQVSV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 CLERLGSLTLKPEDSTVLLFEADTITLRQTITTFGSLKTIQIPEHLMAHASSANIGPFLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 CLERLGSLTLKPEDSTVLLFEADTITLRQTITTFGSLKTIQIPEHLMAHASSANIGPFLE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 KRGCISMPEQKSASGIVAVPFSEWLLGSKPASGYQAPYIPSTDPQDWLTQKQTLENSQTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 KRGCISMPEQKSASGIVAVPFSEWLLGSKPASGYQAPYIPSTDPQDWLTQKQTLENSQTS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 SRACNFFNNVGGNLKGLENWLLKSEKSSYQKCNSHSTTSSFSIEMEKVGDQELPDQDEMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 SRACNFFNNVGGNLKGLENWLLKSEKSSYQKCNSHSTTSSFSIEMEKVGDQELPDQDEMD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 LSDWLVTPQESHKLRKPENGSRETSEKFKLLFQSYNVNDWLVKTDSCTNCQGNQPKGVEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LSDWLVTPQESHKLRKPENGSRETSEKFKLLFQSYNVNDWLVKTDSCTNCQGNQPKGVEI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB4 ENLGNLKCLNDHLEAKKPLSTPSMVTEDWLVQNHQDPCKVEEVCRANEPCTSFAECVCDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 ENLGNLKCLNDHLEAKKPLSTPSMVTEDWLVQNHQDPCKVEEVCRANEPCTSFAECVCDE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB4 NCEKEALYKWLLKKEGKDKNGMPVEPKPEPEKHKDSLNMWLCPRKEVIEQTKAPKAMTPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 NCEKEALYKWLLKKEGKDKNGMPVEPKPEPEKHKDSLNMWLCPRKEVIEQTKAPKAMTPS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB4 RIADSFQVIKNSPLSEWLIRPPYKEGSPKEVPGTEDRAGKQKFKSPMNTSWCSFNTADWV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 RIADSFQVIKNSPLSEWLIRPPYKEGSPKEVPGTEDRAGKQKFKSPMNTSWCSFNTADWV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB4 LPGKKMGNLSQLSSGEDKWLLRKKAQEVLLNSPLQEEHNFPPDHYGLPAVCDLFACMQLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LPGKKMGNLSQLSSGEDKWLLRKKAQEVLLNSPLQEEHNFPPDHYGLPAVCDLFACMQLK
550 560 570 580 590 600
610
pF1KB4 VDKEKWLYRTPLQM
::::::::::::::
NP_005 VDKEKWLYRTPLQM
610
>>NP_001138734 (OMIM: 188550,601984) nuclear receptor co (614 aa)
initn: 4212 init1: 4212 opt: 4212 Z-score: 4377.1 bits: 820.0 E(85289): 0
Smith-Waterman score: 4212; 100.0% identity (100.0% similar) in 614 aa overlap (1-614:1-614)
10 20 30 40 50 60
pF1KB4 MNTFQDQSGSSSNREPLLRCSDARRDLELAIGGVLRAEQQIKDNLREVKAQIHSCISRHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNTFQDQSGSSSNREPLLRCSDARRDLELAIGGVLRAEQQIKDNLREVKAQIHSCISRHL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 ECLRSREVWLYEQVDLIYQLKEETLQQQAQQLYSLLGQFNCLTHQLECTQNKDLANQVSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ECLRSREVWLYEQVDLIYQLKEETLQQQAQQLYSLLGQFNCLTHQLECTQNKDLANQVSV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 CLERLGSLTLKPEDSTVLLFEADTITLRQTITTFGSLKTIQIPEHLMAHASSANIGPFLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CLERLGSLTLKPEDSTVLLFEADTITLRQTITTFGSLKTIQIPEHLMAHASSANIGPFLE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 KRGCISMPEQKSASGIVAVPFSEWLLGSKPASGYQAPYIPSTDPQDWLTQKQTLENSQTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRGCISMPEQKSASGIVAVPFSEWLLGSKPASGYQAPYIPSTDPQDWLTQKQTLENSQTS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 SRACNFFNNVGGNLKGLENWLLKSEKSSYQKCNSHSTTSSFSIEMEKVGDQELPDQDEMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SRACNFFNNVGGNLKGLENWLLKSEKSSYQKCNSHSTTSSFSIEMEKVGDQELPDQDEMD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 LSDWLVTPQESHKLRKPENGSRETSEKFKLLFQSYNVNDWLVKTDSCTNCQGNQPKGVEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSDWLVTPQESHKLRKPENGSRETSEKFKLLFQSYNVNDWLVKTDSCTNCQGNQPKGVEI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB4 ENLGNLKCLNDHLEAKKPLSTPSMVTEDWLVQNHQDPCKVEEVCRANEPCTSFAECVCDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENLGNLKCLNDHLEAKKPLSTPSMVTEDWLVQNHQDPCKVEEVCRANEPCTSFAECVCDE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB4 NCEKEALYKWLLKKEGKDKNGMPVEPKPEPEKHKDSLNMWLCPRKEVIEQTKAPKAMTPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NCEKEALYKWLLKKEGKDKNGMPVEPKPEPEKHKDSLNMWLCPRKEVIEQTKAPKAMTPS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB4 RIADSFQVIKNSPLSEWLIRPPYKEGSPKEVPGTEDRAGKQKFKSPMNTSWCSFNTADWV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RIADSFQVIKNSPLSEWLIRPPYKEGSPKEVPGTEDRAGKQKFKSPMNTSWCSFNTADWV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB4 LPGKKMGNLSQLSSGEDKWLLRKKAQEVLLNSPLQEEHNFPPDHYGLPAVCDLFACMQLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LPGKKMGNLSQLSSGEDKWLLRKKAQEVLLNSPLQEEHNFPPDHYGLPAVCDLFACMQLK
550 560 570 580 590 600
610
pF1KB4 VDKEKWLYRTPLQM
::::::::::::::
NP_001 VDKEKWLYRTPLQM
610
>>NP_001138733 (OMIM: 188550,601984) nuclear receptor co (630 aa)
initn: 4212 init1: 4212 opt: 4212 Z-score: 4377.0 bits: 820.0 E(85289): 0
Smith-Waterman score: 4212; 100.0% identity (100.0% similar) in 614 aa overlap (1-614:17-630)
10 20 30 40
pF1KB4 MNTFQDQSGSSSNREPLLRCSDARRDLELAIGGVLRAEQQIKDN
::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGAQLTTFALAGAVRRMNTFQDQSGSSSNREPLLRCSDARRDLELAIGGVLRAEQQIKDN
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB4 LREVKAQIHSCISRHLECLRSREVWLYEQVDLIYQLKEETLQQQAQQLYSLLGQFNCLTH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LREVKAQIHSCISRHLECLRSREVWLYEQVDLIYQLKEETLQQQAQQLYSLLGQFNCLTH
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB4 QLECTQNKDLANQVSVCLERLGSLTLKPEDSTVLLFEADTITLRQTITTFGSLKTIQIPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLECTQNKDLANQVSVCLERLGSLTLKPEDSTVLLFEADTITLRQTITTFGSLKTIQIPE
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB4 HLMAHASSANIGPFLEKRGCISMPEQKSASGIVAVPFSEWLLGSKPASGYQAPYIPSTDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HLMAHASSANIGPFLEKRGCISMPEQKSASGIVAVPFSEWLLGSKPASGYQAPYIPSTDP
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB4 QDWLTQKQTLENSQTSSRACNFFNNVGGNLKGLENWLLKSEKSSYQKCNSHSTTSSFSIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QDWLTQKQTLENSQTSSRACNFFNNVGGNLKGLENWLLKSEKSSYQKCNSHSTTSSFSIE
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB4 MEKVGDQELPDQDEMDLSDWLVTPQESHKLRKPENGSRETSEKFKLLFQSYNVNDWLVKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEKVGDQELPDQDEMDLSDWLVTPQESHKLRKPENGSRETSEKFKLLFQSYNVNDWLVKT
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB4 DSCTNCQGNQPKGVEIENLGNLKCLNDHLEAKKPLSTPSMVTEDWLVQNHQDPCKVEEVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSCTNCQGNQPKGVEIENLGNLKCLNDHLEAKKPLSTPSMVTEDWLVQNHQDPCKVEEVC
370 380 390 400 410 420
410 420 430 440 450 460
pF1KB4 RANEPCTSFAECVCDENCEKEALYKWLLKKEGKDKNGMPVEPKPEPEKHKDSLNMWLCPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RANEPCTSFAECVCDENCEKEALYKWLLKKEGKDKNGMPVEPKPEPEKHKDSLNMWLCPR
430 440 450 460 470 480
470 480 490 500 510 520
pF1KB4 KEVIEQTKAPKAMTPSRIADSFQVIKNSPLSEWLIRPPYKEGSPKEVPGTEDRAGKQKFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KEVIEQTKAPKAMTPSRIADSFQVIKNSPLSEWLIRPPYKEGSPKEVPGTEDRAGKQKFK
490 500 510 520 530 540
530 540 550 560 570 580
pF1KB4 SPMNTSWCSFNTADWVLPGKKMGNLSQLSSGEDKWLLRKKAQEVLLNSPLQEEHNFPPDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPMNTSWCSFNTADWVLPGKKMGNLSQLSSGEDKWLLRKKAQEVLLNSPLQEEHNFPPDH
550 560 570 580 590 600
590 600 610
pF1KB4 YGLPAVCDLFACMQLKVDKEKWLYRTPLQM
::::::::::::::::::::::::::::::
NP_001 YGLPAVCDLFACMQLKVDKEKWLYRTPLQM
610 620 630
>>NP_001138732 (OMIM: 188550,601984) nuclear receptor co (650 aa)
initn: 4205 init1: 4205 opt: 4205 Z-score: 4369.5 bits: 818.7 E(85289): 0
Smith-Waterman score: 4205; 100.0% identity (100.0% similar) in 613 aa overlap (1-613:17-629)
10 20 30 40
pF1KB4 MNTFQDQSGSSSNREPLLRCSDARRDLELAIGGVLRAEQQIKDN
::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGAQLTTFALAGAVRRMNTFQDQSGSSSNREPLLRCSDARRDLELAIGGVLRAEQQIKDN
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB4 LREVKAQIHSCISRHLECLRSREVWLYEQVDLIYQLKEETLQQQAQQLYSLLGQFNCLTH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LREVKAQIHSCISRHLECLRSREVWLYEQVDLIYQLKEETLQQQAQQLYSLLGQFNCLTH
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB4 QLECTQNKDLANQVSVCLERLGSLTLKPEDSTVLLFEADTITLRQTITTFGSLKTIQIPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLECTQNKDLANQVSVCLERLGSLTLKPEDSTVLLFEADTITLRQTITTFGSLKTIQIPE
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB4 HLMAHASSANIGPFLEKRGCISMPEQKSASGIVAVPFSEWLLGSKPASGYQAPYIPSTDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HLMAHASSANIGPFLEKRGCISMPEQKSASGIVAVPFSEWLLGSKPASGYQAPYIPSTDP
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB4 QDWLTQKQTLENSQTSSRACNFFNNVGGNLKGLENWLLKSEKSSYQKCNSHSTTSSFSIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QDWLTQKQTLENSQTSSRACNFFNNVGGNLKGLENWLLKSEKSSYQKCNSHSTTSSFSIE
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB4 MEKVGDQELPDQDEMDLSDWLVTPQESHKLRKPENGSRETSEKFKLLFQSYNVNDWLVKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEKVGDQELPDQDEMDLSDWLVTPQESHKLRKPENGSRETSEKFKLLFQSYNVNDWLVKT
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB4 DSCTNCQGNQPKGVEIENLGNLKCLNDHLEAKKPLSTPSMVTEDWLVQNHQDPCKVEEVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSCTNCQGNQPKGVEIENLGNLKCLNDHLEAKKPLSTPSMVTEDWLVQNHQDPCKVEEVC
370 380 390 400 410 420
410 420 430 440 450 460
pF1KB4 RANEPCTSFAECVCDENCEKEALYKWLLKKEGKDKNGMPVEPKPEPEKHKDSLNMWLCPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RANEPCTSFAECVCDENCEKEALYKWLLKKEGKDKNGMPVEPKPEPEKHKDSLNMWLCPR
430 440 450 460 470 480
470 480 490 500 510 520
pF1KB4 KEVIEQTKAPKAMTPSRIADSFQVIKNSPLSEWLIRPPYKEGSPKEVPGTEDRAGKQKFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KEVIEQTKAPKAMTPSRIADSFQVIKNSPLSEWLIRPPYKEGSPKEVPGTEDRAGKQKFK
490 500 510 520 530 540
530 540 550 560 570 580
pF1KB4 SPMNTSWCSFNTADWVLPGKKMGNLSQLSSGEDKWLLRKKAQEVLLNSPLQEEHNFPPDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPMNTSWCSFNTADWVLPGKKMGNLSQLSSGEDKWLLRKKAQEVLLNSPLQEEHNFPPDH
550 560 570 580 590 600
590 600 610
pF1KB4 YGLPAVCDLFACMQLKVDKEKWLYRTPLQM
:::::::::::::::::::::::::::::
NP_001 YGLPAVCDLFACMQLKVDKEKWLYRTPLQAYFKMNFQDVTVGNFQIPCGF
610 620 630 640 650
614 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 15:16:40 2016 done: Thu Nov 3 15:16:42 2016
Total Scan time: 10.100 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]