Result of FASTA (ccds) for
pF1KB4670
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB4670, 401 aa
1>>>pF1KB4670 401 - 401 aa - 401 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.7542+/-0.00079; mu= 12.3642+/- 0.049
mean_var=145.6206+/-30.389, 0's: 0 Z-trim(112.9): 51 B-trim: 766 in 1/51
Lambda= 0.106283
statistics sampled from 13561 (13612) to 13561 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.763), E-opt: 0.2 (0.418), width: 16
Scan time: 3.280
The best scores are: opt bits E(32554)
CCDS45217.1 MEIS2 gene_id:4212|Hs108|chr15 ( 401) 2817 443.2 2e-124
CCDS45218.1 MEIS2 gene_id:4212|Hs108|chr15 ( 394) 2744 432.0 4.6e-121
CCDS45219.1 MEIS2 gene_id:4212|Hs108|chr15 ( 388) 2720 428.3 5.8e-120
CCDS10044.1 MEIS2 gene_id:4212|Hs108|chr15 ( 477) 2679 422.1 5.2e-118
CCDS42014.1 MEIS2 gene_id:4212|Hs108|chr15 ( 381) 2647 417.1 1.3e-116
CCDS10045.1 MEIS2 gene_id:4212|Hs108|chr15 ( 470) 2606 410.9 1.2e-114
CCDS45220.1 MEIS2 gene_id:4212|Hs108|chr15 ( 306) 2090 331.6 5.9e-91
CCDS46309.1 MEIS1 gene_id:4211|Hs108|chr2 ( 390) 2074 329.3 3.8e-90
CCDS74406.1 MEIS3 gene_id:56917|Hs108|chr19 ( 375) 1599 256.4 3.1e-68
CCDS33064.1 MEIS3 gene_id:56917|Hs108|chr19 ( 421) 1229 199.7 4.1e-51
CCDS46132.1 MEIS3 gene_id:56917|Hs108|chr19 ( 358) 913 151.2 1.4e-36
CCDS13692.1 PKNOX1 gene_id:5316|Hs108|chr21 ( 436) 436 78.2 1.7e-14
CCDS41730.1 PKNOX2 gene_id:63876|Hs108|chr11 ( 472) 380 69.6 6.8e-12
CCDS68211.1 PKNOX1 gene_id:5316|Hs108|chr21 ( 319) 355 65.6 7.3e-11
>>CCDS45217.1 MEIS2 gene_id:4212|Hs108|chr15 (401 aa)
initn: 2817 init1: 2817 opt: 2817 Z-score: 2347.4 bits: 443.2 E(32554): 2e-124
Smith-Waterman score: 2817; 100.0% identity (100.0% similar) in 401 aa overlap (1-401:1-401)
10 20 30 40 50 60
pF1KB4 MAQRYDELPHYGGMDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MAQRYDELPHYGGMDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 MPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 EDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 EDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 GKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 ASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 ASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAGFLLDPSVSQGAAYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAGFLLDPSVSQGAAYS
310 320 330 340 350 360
370 380 390 400
pF1KB4 PEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMDGQWHYM
:::::::::::::::::::::::::::::::::::::::::
CCDS45 PEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMDGQWHYM
370 380 390 400
>>CCDS45218.1 MEIS2 gene_id:4212|Hs108|chr15 (394 aa)
initn: 2407 init1: 2407 opt: 2744 Z-score: 2287.0 bits: 432.0 E(32554): 4.6e-121
Smith-Waterman score: 2744; 98.3% identity (98.3% similar) in 401 aa overlap (1-401:1-394)
10 20 30 40 50 60
pF1KB4 MAQRYDELPHYGGMDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MAQRYDELPHYGGMDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 MPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 EDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 EDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 GKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 ASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 ASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAGFLLDPSVSQGAAYS
::::::::::::::::::::::::::::::::::::::::::::: ::::::::
CCDS45 HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRA-------VSQGAAYS
310 320 330 340 350
370 380 390 400
pF1KB4 PEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMDGQWHYM
:::::::::::::::::::::::::::::::::::::::::
CCDS45 PEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMDGQWHYM
360 370 380 390
>>CCDS45219.1 MEIS2 gene_id:4212|Hs108|chr15 (388 aa)
initn: 2720 init1: 2720 opt: 2720 Z-score: 2267.2 bits: 428.3 E(32554): 5.8e-120
Smith-Waterman score: 2720; 100.0% identity (100.0% similar) in 388 aa overlap (14-401:1-388)
10 20 30 40 50 60
pF1KB4 MAQRYDELPHYGGMDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNV
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNV
10 20 30 40
70 80 90 100 110 120
pF1KB4 MPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFN
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB4 EDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 EDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLK
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB4 GKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGH
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB4 ASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 ASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLT
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB4 HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAGFLLDPSVSQGAAYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAGFLLDPSVSQGAAYS
290 300 310 320 330 340
370 380 390 400
pF1KB4 PEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMDGQWHYM
:::::::::::::::::::::::::::::::::::::::::
CCDS45 PEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMDGQWHYM
350 360 370 380
>>CCDS10044.1 MEIS2 gene_id:4212|Hs108|chr15 (477 aa)
initn: 2704 init1: 2674 opt: 2679 Z-score: 2232.1 bits: 422.1 E(32554): 5.2e-118
Smith-Waterman score: 2679; 97.2% identity (97.5% similar) in 400 aa overlap (1-394:1-400)
10 20 30 40 50 60
pF1KB4 MAQRYDELPHYGGMDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MAQRYDELPHYGGMDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 MPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 EDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 EDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 GKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 GKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 ASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 ASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAGFLLDPSVSQGAAYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAGFLLDPSVSQGAAYS
310 320 330 340 350 360
370 380 390 400
pF1KB4 PEGQPMGSFVLDGQQHMGIRPAG--PMSG----MGMNMGMDGQWHYM
::::::::::::::::::::::: : : .: :::
CCDS10 PEGQPMGSFVLDGQQHMGIRPAGLQSMPGDYVSQGGPMGMSMAQPSYTPPQMTPHPTQLR
370 380 390 400 410 420
CCDS10 HGPPMHSYLPSHPHHPAMMMHGGPPTHPGMTMSAQSPTMLNSVDPNVGGQVMDIHAQ
430 440 450 460 470
>>CCDS42014.1 MEIS2 gene_id:4212|Hs108|chr15 (381 aa)
initn: 2310 init1: 2310 opt: 2647 Z-score: 2206.8 bits: 417.1 E(32554): 1.3e-116
Smith-Waterman score: 2647; 98.2% identity (98.2% similar) in 388 aa overlap (14-401:1-381)
10 20 30 40 50 60
pF1KB4 MAQRYDELPHYGGMDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNV
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNV
10 20 30 40
70 80 90 100 110 120
pF1KB4 MPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFN
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB4 EDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 EDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLK
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB4 GKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 GKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGH
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB4 ASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 ASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLT
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB4 HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAGFLLDPSVSQGAAYS
::::::::::::::::::::::::::::::::::::::::::::: ::::::::
CCDS42 HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRA-------VSQGAAYS
290 300 310 320 330 340
370 380 390 400
pF1KB4 PEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMDGQWHYM
:::::::::::::::::::::::::::::::::::::::::
CCDS42 PEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMDGQWHYM
350 360 370 380
>>CCDS10045.1 MEIS2 gene_id:4212|Hs108|chr15 (470 aa)
initn: 2611 init1: 2407 opt: 2606 Z-score: 2171.7 bits: 410.9 E(32554): 1.2e-114
Smith-Waterman score: 2606; 95.5% identity (95.8% similar) in 400 aa overlap (1-394:1-393)
10 20 30 40 50 60
pF1KB4 MAQRYDELPHYGGMDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MAQRYDELPHYGGMDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 MPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 EDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 EDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 GKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 GKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 ASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 ASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAGFLLDPSVSQGAAYS
::::::::::::::::::::::::::::::::::::::::::::: ::::::::
CCDS10 HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRA-------VSQGAAYS
310 320 330 340 350
370 380 390 400
pF1KB4 PEGQPMGSFVLDGQQHMGIRPAG--PMSG----MGMNMGMDGQWHYM
::::::::::::::::::::::: : : .: :::
CCDS10 PEGQPMGSFVLDGQQHMGIRPAGLQSMPGDYVSQGGPMGMSMAQPSYTPPQMTPHPTQLR
360 370 380 390 400 410
CCDS10 HGPPMHSYLPSHPHHPAMMMHGGPPTHPGMTMSAQSPTMLNSVDPNVGGQVMDIHAQ
420 430 440 450 460 470
>>CCDS45220.1 MEIS2 gene_id:4212|Hs108|chr15 (306 aa)
initn: 1753 init1: 1753 opt: 2090 Z-score: 1746.5 bits: 331.6 E(32554): 5.9e-91
Smith-Waterman score: 2090; 97.4% identity (97.8% similar) in 313 aa overlap (89-401:1-306)
60 70 80 90 100 110
pF1KB4 NVMPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDS
.:::::::::::::::::::::::::::::
CCDS45 MALVFEKCELATCTPREPGVAGGDVCSSDS
10 20 30
120 130 140 150 160 170
pF1KB4 FNEDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 FNEDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISC
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB4 LKGKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 LKGKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSG
100 110 120 130 140 150
240 250 260 270 280 290
pF1KB4 GHASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GHASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQH
160 170 180 190 200 210
300 310 320 330 340 350
pF1KB4 LTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAGFLLDPSVSQGAA
::::::::::::::::::::::::::::::::::::::::::::::: ::::::
CCDS45 LTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRA-------VSQGAA
220 230 240 250 260
360 370 380 390 400
pF1KB4 YSPEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMDGQWHYM
:::::::::::::::::::::::::::::::::::::::::::
CCDS45 YSPEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMDGQWHYM
270 280 290 300
>>CCDS46309.1 MEIS1 gene_id:4211|Hs108|chr2 (390 aa)
initn: 1548 init1: 947 opt: 2074 Z-score: 1731.8 bits: 329.3 E(32554): 3.8e-90
Smith-Waterman score: 2353; 84.3% identity (93.3% similar) in 401 aa overlap (1-401:1-390)
10 20 30 40 50 60
pF1KB4 MAQRYDELPHYGGMDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNV
::::::.:::::::::::.:..::::::: : . ::::::::::::. :. :. : :.
CCDS46 MAQRYDDLPHYGGMDGVGIPSTMYGDPHAARSMQPVHHLNHGPPLHSHQY--PHTAHTNA
10 20 30 40 50
70 80 90 100 110 120
pF1KB4 MPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFN
: ::::.:::::::::::::::::::::::.::::::::::::::::::::::::.:::
CCDS46 MAPSMGSSVNDALKRDKDAIYGHPLFPLLALIFEKCELATCTPREPGVAGGDVCSSESFN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB4 EDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLK
:::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 EDIAVFAKQIRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLK
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB4 GKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGH
::::::::::.:.:.:::: :... :.::.:. :: :::::..::.:.::::::::::
CCDS46 GKMPIDLVIDDREGGSKSDSEDIT-RSANLTDQ-PSWNRDHDDTASTRSGGTPGPSSGGH
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB4 ASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLT
.:.:::::::::::::::::::.:::::::::::::.:::::::::::::::::::::::
CCDS46 TSHSGDNSSEQGDGLDNSVASPSTGDDDDPDKDKKRHKKRGIFPKVATNIMRAWLFQHLT
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB4 HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAGFLLDPSVSQGAAYS
::::::::::::::::::::::::::::::::::::::::::::: ::::. :.
CCDS46 HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRA-------VSQGTPYN
300 310 320 330 340
370 380 390 400
pF1KB4 PEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMDGQWHYM
:.:::::.::.::::::::: ::::::::::::.::::::
CCDS46 PDGQPMGGFVMDGQQHMGIRAPGPMSGMGMNMGMEGQWHYM
350 360 370 380 390
>>CCDS74406.1 MEIS3 gene_id:56917|Hs108|chr19 (375 aa)
initn: 1795 init1: 1125 opt: 1599 Z-score: 1338.4 bits: 256.4 E(32554): 3.1e-68
Smith-Waterman score: 1755; 66.3% identity (82.0% similar) in 410 aa overlap (1-401:1-375)
10 20 30 40 50
pF1KB4 MAQRYDELPHYGGM-DGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPN
::.:::::::: :. :: ::.. . :. .: : :: :: : : :.
CCDS74 MARRYDELPHYPGIVDG---PAALAS---FPETVPAVP----GP-------YGPHRP-PQ
10 20 30 40
60 70 80 90 100 110
pF1KB4 VMPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAG------GDV
.: .. : :.:::.:: ::::::::::::::::::::::.::. . :: :::
CCDS74 PLPPGLDS---DGLKREKDEIYGHPLFPLLALVFEKCELATCSPRDGAGAGLGTPPGGDV
50 60 70 80 90
120 130 140 150 160 170
pF1KB4 CSSDSFNEDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCH
:::::::::::.::::::.:.:::::::::::::::::::::::::::::::.:::::::
CCDS74 CSSDSFNEDIAAFAKQVRSERPLFSSNPELDNLMIQAIQVLRFHLLELEKVHDLCDNFCH
100 110 120 130 140 150
180 190 200 210 220 230
pF1KB4 RYISCLKGKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSW-RDHDDATSTHSAGT
:::.::::::::::::..:::. . : :. .: .: :.: . : :::.:. :.: ::
CCDS74 RYITCLKGKMPIDLVIEDRDGGCREDFEDYPASCPSLPDQN-NMWIRDHEDSGSVH-LGT
160 170 180 190 200 210
240 250 260 270 280 290
pF1KB4 PGPSSGGHASQSGDNSSEQGDGLDNSVASPGTG-DDDDPDKDKKRQKKRGIFPKVATNIM
::::::: :::::::::.::::::.:::::..: .:.: :....:.::::::::::::::
CCDS74 PGPSSGGLASQSGDNSSDQGDGLDTSVASPSSGGEDEDLDQERRRNKKRGIFPKVATNIM
220 230 240 250 260 270
300 310 320 330 340 350
pF1KB4 RAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAGFLLDP
::::::::.::::::::::::::::::::::::::::::::::::::::::::.:
CCDS74 RAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRTG-----
280 290 300 310 320 330
360 370 380 390 400
pF1KB4 SVSQGAAYSPEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMDGQWHYM
::::.::::::.:... . : :...:: : ..::.....:.:::.
CCDS74 ---QGAAFSPEGQPIGGYT-ETQPHVAVRPPG---SVGMSLNLEGEWHYL
340 350 360 370
>>CCDS33064.1 MEIS3 gene_id:56917|Hs108|chr19 (421 aa)
initn: 1781 init1: 818 opt: 1229 Z-score: 1031.2 bits: 199.7 E(32554): 4.1e-51
Smith-Waterman score: 1642; 59.7% identity (73.6% similar) in 454 aa overlap (1-399:1-419)
10 20 30 40 50
pF1KB4 MAQRYDELPHYGGM-DGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPN
::.:::::::: :. :: ::.. . :. .: : :: :: : : :.
CCDS33 MARRYDELPHYPGIVDG---PAALAS---FPETVPAVP----GP-------YGPHRP-PQ
10 20 30 40
60 70 80 90 100 110
pF1KB4 VMPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAG------GDV
.: .. : :.:::.:: ::::::::::::::::::::::.::. . :: :::
CCDS33 PLPPGLDS---DGLKREKDEIYGHPLFPLLALVFEKCELATCSPRDGAGAGLGTPPGGDV
50 60 70 80 90
120 130 140 150 160 170
pF1KB4 CSSDSFNEDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCH
:::::::::::.::::::.:.:::::::::::::::::::::::::::::::.:::::::
CCDS33 CSSDSFNEDIAAFAKQVRSERPLFSSNPELDNLMIQAIQVLRFHLLELEKVHDLCDNFCH
100 110 120 130 140 150
180 190 200 210 220 230
pF1KB4 RYISCLKGKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSW-RDHDDATSTHSAGT
:::.::::::::::::..:::. . : :. .: .: :.: . : :::.:. :.: ::
CCDS33 RYITCLKGKMPIDLVIEDRDGGCREDFEDYPASCPSLPDQN-NMWIRDHEDSGSVH-LGT
160 170 180 190 200 210
240 250 260 270 280 290
pF1KB4 PGPSSGGHASQSGDNSSEQGDGLDNSVASPGTG-DDDDPDKDKKRQKKRGIFPKVATNIM
::::::: :::::::::.::::::.:::::..: .:.: :....:.::::::::::::::
CCDS33 PGPSSGGLASQSGDNSSDQGDGLDTSVASPSSGGEDEDLDQERRRNKKRGIFPKVATNIM
220 230 240 250 260 270
300
pF1KB4 RAWLFQHLT----------------------------------------------HPYPS
::::::::. :::::
CCDS33 RAWLFQHLSRRSEAPVLPDVCLGLGSPSPGPRWARPWGSDCGRPGRQSDSCWWLQHPYPS
280 290 300 310 320 330
310 320 330 340 350 360
pF1KB4 EEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAGFLLDPSVSQGAAYSPEGQP
:::::::::::::::::::::::::::::::::::::::.: ::::.::::::
CCDS33 EEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRTG--------QGAAFSPEGQP
340 350 360 370 380
370 380 390 400
pF1KB4 MGSFVLDGQQHMGIRPAGPMSGMGMNMGMDGQWHYM
.:... . : :...:: : ..::.....:.::
CCDS33 IGGYT-ETQPHVAVRPPG---SVGMSLNLEGEWHYL
390 400 410 420
401 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 15:19:14 2016 done: Thu Nov 3 15:19:15 2016
Total Scan time: 3.280 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]