Result of FASTA (omim) for
pF1KB4670
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB4670, 401 aa
1>>>pF1KB4670 401 - 401 aa - 401 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.1480+/-0.000323; mu= 9.9448+/- 0.020
mean_var=145.4537+/-29.165, 0's: 0 Z-trim(120.5): 121 B-trim: 0 in 0/54
Lambda= 0.106344
statistics sampled from 35684 (35810) to 35684 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.762), E-opt: 0.2 (0.42), width: 16
Scan time: 8.710
The best scores are: opt bits E(85289)
NP_733777 (OMIM: 601740) homeobox protein Meis2 is ( 401) 2817 443.5 4.4e-124
XP_006720587 (OMIM: 601740) PREDICTED: homeobox pr ( 400) 2791 439.5 6.9e-123
NP_733774 (OMIM: 601740) homeobox protein Meis2 is ( 394) 2744 432.3 1e-120
NP_758526 (OMIM: 601740) homeobox protein Meis2 is ( 388) 2720 428.6 1.3e-119
XP_006720588 (OMIM: 601740) PREDICTED: homeobox pr ( 393) 2718 428.3 1.6e-119
NP_733775 (OMIM: 601740) homeobox protein Meis2 is ( 477) 2679 422.4 1.2e-117
XP_006720586 (OMIM: 601740) PREDICTED: homeobox pr ( 476) 2653 418.4 1.9e-116
NP_002390 (OMIM: 601740) homeobox protein Meis2 is ( 381) 2647 417.4 3e-116
NP_001207411 (OMIM: 601740) homeobox protein Meis2 ( 470) 2606 411.2 2.7e-114
NP_733776 (OMIM: 601740) homeobox protein Meis2 is ( 470) 2606 411.2 2.7e-114
XP_016859631 (OMIM: 601739) PREDICTED: homeobox pr ( 417) 2101 333.6 5.3e-91
XP_005264379 (OMIM: 601739) PREDICTED: homeobox pr ( 465) 2093 332.4 1.3e-90
XP_016877694 (OMIM: 601740) PREDICTED: homeobox pr ( 306) 2090 331.8 1.3e-90
NP_758527 (OMIM: 601740) homeobox protein Meis2 is ( 306) 2090 331.8 1.3e-90
XP_016859630 (OMIM: 601739) PREDICTED: homeobox pr ( 433) 2075 329.7 8.6e-90
NP_002389 (OMIM: 601739) homeobox protein Meis1 [H ( 390) 2074 329.5 8.8e-90
XP_005264378 (OMIM: 601739) PREDICTED: homeobox pr ( 481) 2067 328.5 2.2e-89
XP_005264380 (OMIM: 601739) PREDICTED: homeobox pr ( 406) 2048 325.5 1.4e-88
XP_006720589 (OMIM: 601740) PREDICTED: homeobox pr ( 389) 2025 321.9 1.6e-87
XP_006720592 (OMIM: 601740) PREDICTED: homeobox pr ( 255) 1777 283.8 3.3e-76
XP_016859632 (OMIM: 601739) PREDICTED: homeobox pr ( 352) 1653 264.8 2.3e-70
XP_005264381 (OMIM: 601739) PREDICTED: homeobox pr ( 400) 1645 263.7 5.8e-70
XP_011519893 (OMIM: 601740) PREDICTED: homeobox pr ( 331) 1639 262.7 9.6e-70
XP_006720590 (OMIM: 601740) PREDICTED: homeobox pr ( 331) 1639 262.7 9.6e-70
XP_005264382 (OMIM: 601739) PREDICTED: homeobox pr ( 325) 1626 260.7 3.8e-69
XP_016859635 (OMIM: 601739) PREDICTED: homeobox pr ( 246) 1477 237.7 2.3e-62
XP_016859634 (OMIM: 601739) PREDICTED: homeobox pr ( 321) 1344 217.4 3.9e-56
XP_016859633 (OMIM: 601739) PREDICTED: homeobox pr ( 321) 1344 217.4 3.9e-56
XP_011541248 (OMIM: 613066) PREDICTED: homeobox pr ( 356) 451 80.4 7.5e-15
XP_016873601 (OMIM: 613066) PREDICTED: homeobox pr ( 327) 440 78.7 2.3e-14
NP_004562 (OMIM: 602100) homeobox protein PKNOX1 i ( 436) 436 78.2 4.3e-14
NP_001307623 (OMIM: 602100) homeobox protein PKNOX ( 435) 432 77.6 6.6e-14
XP_006718957 (OMIM: 613066) PREDICTED: homeobox pr ( 339) 380 69.5 1.4e-11
XP_016873600 (OMIM: 613066) PREDICTED: homeobox pr ( 339) 380 69.5 1.4e-11
XP_011541249 (OMIM: 613066) PREDICTED: homeobox pr ( 339) 380 69.5 1.4e-11
XP_005271700 (OMIM: 613066) PREDICTED: homeobox pr ( 443) 380 69.6 1.7e-11
NP_071345 (OMIM: 613066) homeobox protein PKNOX2 [ ( 472) 380 69.6 1.8e-11
XP_011541247 (OMIM: 613066) PREDICTED: homeobox pr ( 472) 380 69.6 1.8e-11
XP_005271699 (OMIM: 613066) PREDICTED: homeobox pr ( 472) 380 69.6 1.8e-11
XP_011541246 (OMIM: 613066) PREDICTED: homeobox pr ( 472) 380 69.6 1.8e-11
XP_016873599 (OMIM: 613066) PREDICTED: homeobox pr ( 472) 380 69.6 1.8e-11
NP_001273187 (OMIM: 602100) homeobox protein PKNOX ( 319) 355 65.7 1.9e-10
NP_620410 (OMIM: 300411) homeobox protein TGIF2LX ( 241) 266 51.9 1.9e-06
NP_631960 (OMIM: 400025) homeobox protein TGIF2LY ( 185) 257 50.4 4.1e-06
NP_775299 (OMIM: 142946,602630) homeobox protein T ( 286) 244 48.6 2.3e-05
NP_001186444 (OMIM: 607294) homeobox protein TGIF2 ( 237) 242 48.2 2.5e-05
NP_068581 (OMIM: 607294) homeobox protein TGIF2 [H ( 237) 242 48.2 2.5e-05
NP_001186442 (OMIM: 607294) homeobox protein TGIF2 ( 237) 242 48.2 2.5e-05
NP_001186443 (OMIM: 607294) homeobox protein TGIF2 ( 237) 242 48.2 2.5e-05
NP_733796 (OMIM: 142946,602630) homeobox protein T ( 401) 241 48.3 4.1e-05
>>NP_733777 (OMIM: 601740) homeobox protein Meis2 isofor (401 aa)
initn: 2817 init1: 2817 opt: 2817 Z-score: 2348.7 bits: 443.5 E(85289): 4.4e-124
Smith-Waterman score: 2817; 100.0% identity (100.0% similar) in 401 aa overlap (1-401:1-401)
10 20 30 40 50 60
pF1KB4 MAQRYDELPHYGGMDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_733 MAQRYDELPHYGGMDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 MPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_733 MPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 EDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_733 EDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 GKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_733 GKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 ASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_733 ASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAGFLLDPSVSQGAAYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_733 HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAGFLLDPSVSQGAAYS
310 320 330 340 350 360
370 380 390 400
pF1KB4 PEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMDGQWHYM
:::::::::::::::::::::::::::::::::::::::::
NP_733 PEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMDGQWHYM
370 380 390 400
>>XP_006720587 (OMIM: 601740) PREDICTED: homeobox protei (400 aa)
initn: 2791 init1: 2791 opt: 2791 Z-score: 2327.2 bits: 439.5 E(85289): 6.9e-123
Smith-Waterman score: 2791; 100.0% identity (100.0% similar) in 397 aa overlap (5-401:4-400)
10 20 30 40 50 60
pF1KB4 MAQRYDELPHYGGMDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MFLYDELPHYGGMDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNV
10 20 30 40 50
70 80 90 100 110 120
pF1KB4 MPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB4 EDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLK
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB4 GKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGH
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB4 ASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLT
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB4 HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAGFLLDPSVSQGAAYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAGFLLDPSVSQGAAYS
300 310 320 330 340 350
370 380 390 400
pF1KB4 PEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMDGQWHYM
:::::::::::::::::::::::::::::::::::::::::
XP_006 PEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMDGQWHYM
360 370 380 390 400
>>NP_733774 (OMIM: 601740) homeobox protein Meis2 isofor (394 aa)
initn: 2407 init1: 2407 opt: 2744 Z-score: 2288.3 bits: 432.3 E(85289): 1e-120
Smith-Waterman score: 2744; 98.3% identity (98.3% similar) in 401 aa overlap (1-401:1-394)
10 20 30 40 50 60
pF1KB4 MAQRYDELPHYGGMDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_733 MAQRYDELPHYGGMDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 MPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_733 MPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 EDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_733 EDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 GKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_733 GKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 ASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_733 ASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAGFLLDPSVSQGAAYS
::::::::::::::::::::::::::::::::::::::::::::: ::::::::
NP_733 HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRA-------VSQGAAYS
310 320 330 340 350
370 380 390 400
pF1KB4 PEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMDGQWHYM
:::::::::::::::::::::::::::::::::::::::::
NP_733 PEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMDGQWHYM
360 370 380 390
>>NP_758526 (OMIM: 601740) homeobox protein Meis2 isofor (388 aa)
initn: 2720 init1: 2720 opt: 2720 Z-score: 2268.5 bits: 428.6 E(85289): 1.3e-119
Smith-Waterman score: 2720; 100.0% identity (100.0% similar) in 388 aa overlap (14-401:1-388)
10 20 30 40 50 60
pF1KB4 MAQRYDELPHYGGMDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNV
:::::::::::::::::::::::::::::::::::::::::::::::
NP_758 MDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNV
10 20 30 40
70 80 90 100 110 120
pF1KB4 MPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_758 MPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFN
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB4 EDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_758 EDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLK
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB4 GKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_758 GKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGH
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB4 ASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_758 ASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLT
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB4 HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAGFLLDPSVSQGAAYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_758 HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAGFLLDPSVSQGAAYS
290 300 310 320 330 340
370 380 390 400
pF1KB4 PEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMDGQWHYM
:::::::::::::::::::::::::::::::::::::::::
NP_758 PEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMDGQWHYM
350 360 370 380
>>XP_006720588 (OMIM: 601740) PREDICTED: homeobox protei (393 aa)
initn: 2381 init1: 2381 opt: 2718 Z-score: 2266.8 bits: 428.3 E(85289): 1.6e-119
Smith-Waterman score: 2718; 98.2% identity (98.2% similar) in 397 aa overlap (5-401:4-393)
10 20 30 40 50 60
pF1KB4 MAQRYDELPHYGGMDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MFLYDELPHYGGMDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNV
10 20 30 40 50
70 80 90 100 110 120
pF1KB4 MPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB4 EDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLK
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB4 GKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGH
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB4 ASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLT
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB4 HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAGFLLDPSVSQGAAYS
::::::::::::::::::::::::::::::::::::::::::::: ::::::::
XP_006 HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRA-------VSQGAAYS
300 310 320 330 340 350
370 380 390 400
pF1KB4 PEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMDGQWHYM
:::::::::::::::::::::::::::::::::::::::::
XP_006 PEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMDGQWHYM
360 370 380 390
>>NP_733775 (OMIM: 601740) homeobox protein Meis2 isofor (477 aa)
initn: 2704 init1: 2674 opt: 2679 Z-score: 2233.3 bits: 422.4 E(85289): 1.2e-117
Smith-Waterman score: 2679; 97.2% identity (97.5% similar) in 400 aa overlap (1-394:1-400)
10 20 30 40 50 60
pF1KB4 MAQRYDELPHYGGMDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_733 MAQRYDELPHYGGMDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 MPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_733 MPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 EDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_733 EDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 GKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_733 GKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 ASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_733 ASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAGFLLDPSVSQGAAYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_733 HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAGFLLDPSVSQGAAYS
310 320 330 340 350 360
370 380 390 400
pF1KB4 PEGQPMGSFVLDGQQHMGIRPAG--PMSG----MGMNMGMDGQWHYM
::::::::::::::::::::::: : : .: :::
NP_733 PEGQPMGSFVLDGQQHMGIRPAGLQSMPGDYVSQGGPMGMSMAQPSYTPPQMTPHPTQLR
370 380 390 400 410 420
NP_733 HGPPMHSYLPSHPHHPAMMMHGGPPTHPGMTMSAQSPTMLNSVDPNVGGQVMDIHAQ
430 440 450 460 470
>>XP_006720586 (OMIM: 601740) PREDICTED: homeobox protei (476 aa)
initn: 2678 init1: 2648 opt: 2653 Z-score: 2211.7 bits: 418.4 E(85289): 1.9e-116
Smith-Waterman score: 2653; 97.2% identity (97.5% similar) in 396 aa overlap (5-394:4-399)
10 20 30 40 50 60
pF1KB4 MAQRYDELPHYGGMDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MFLYDELPHYGGMDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNV
10 20 30 40 50
70 80 90 100 110 120
pF1KB4 MPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB4 EDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLK
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB4 GKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGH
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB4 ASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLT
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB4 HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAGFLLDPSVSQGAAYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAGFLLDPSVSQGAAYS
300 310 320 330 340 350
370 380 390 400
pF1KB4 PEGQPMGSFVLDGQQHMGIRPAG--PMSG----MGMNMGMDGQWHYM
::::::::::::::::::::::: : : .: :::
XP_006 PEGQPMGSFVLDGQQHMGIRPAGLQSMPGDYVSQGGPMGMSMAQPSYTPPQMTPHPTQLR
360 370 380 390 400 410
XP_006 HGPPMHSYLPSHPHHPAMMMHGGPPTHPGMTMSAQSPTMLNSVDPNVGGQVMDIHAQ
420 430 440 450 460 470
>>NP_002390 (OMIM: 601740) homeobox protein Meis2 isofor (381 aa)
initn: 2310 init1: 2310 opt: 2647 Z-score: 2208.1 bits: 417.4 E(85289): 3e-116
Smith-Waterman score: 2647; 98.2% identity (98.2% similar) in 388 aa overlap (14-401:1-381)
10 20 30 40 50 60
pF1KB4 MAQRYDELPHYGGMDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNV
:::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNV
10 20 30 40
70 80 90 100 110 120
pF1KB4 MPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFN
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB4 EDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 EDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLK
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB4 GKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 GKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGH
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB4 ASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 ASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLT
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB4 HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAGFLLDPSVSQGAAYS
::::::::::::::::::::::::::::::::::::::::::::: ::::::::
NP_002 HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRA-------VSQGAAYS
290 300 310 320 330 340
370 380 390 400
pF1KB4 PEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMDGQWHYM
:::::::::::::::::::::::::::::::::::::::::
NP_002 PEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMDGQWHYM
350 360 370 380
>>NP_001207411 (OMIM: 601740) homeobox protein Meis2 iso (470 aa)
initn: 2611 init1: 2407 opt: 2606 Z-score: 2172.8 bits: 411.2 E(85289): 2.7e-114
Smith-Waterman score: 2606; 95.5% identity (95.8% similar) in 400 aa overlap (1-394:1-393)
10 20 30 40 50 60
pF1KB4 MAQRYDELPHYGGMDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAQRYDELPHYGGMDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 MPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 EDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 GKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 ASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAGFLLDPSVSQGAAYS
::::::::::::::::::::::::::::::::::::::::::::: ::::::::
NP_001 HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRA-------VSQGAAYS
310 320 330 340 350
370 380 390 400
pF1KB4 PEGQPMGSFVLDGQQHMGIRPAG--PMSG----MGMNMGMDGQWHYM
::::::::::::::::::::::: : : .: :::
NP_001 PEGQPMGSFVLDGQQHMGIRPAGLQSMPGDYVSQGGPMGMSMAQPSYTPPQMTPHPTQLR
360 370 380 390 400 410
NP_001 HGPPMHSYLPSHPHHPAMMMHGGPPTHPGMTMSAQSPTMLNSVDPNVGGQVMDIHAQ
420 430 440 450 460 470
>>NP_733776 (OMIM: 601740) homeobox protein Meis2 isofor (470 aa)
initn: 2611 init1: 2407 opt: 2606 Z-score: 2172.8 bits: 411.2 E(85289): 2.7e-114
Smith-Waterman score: 2606; 95.5% identity (95.8% similar) in 400 aa overlap (1-394:1-393)
10 20 30 40 50 60
pF1KB4 MAQRYDELPHYGGMDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_733 MAQRYDELPHYGGMDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 MPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_733 MPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 EDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_733 EDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 GKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_733 GKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 ASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_733 ASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAGFLLDPSVSQGAAYS
::::::::::::::::::::::::::::::::::::::::::::: ::::::::
NP_733 HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRA-------VSQGAAYS
310 320 330 340 350
370 380 390 400
pF1KB4 PEGQPMGSFVLDGQQHMGIRPAG--PMSG----MGMNMGMDGQWHYM
::::::::::::::::::::::: : : .: :::
NP_733 PEGQPMGSFVLDGQQHMGIRPAGLQSMPGDYVSQGGPMGMSMAQPSYTPPQMTPHPTQLR
360 370 380 390 400 410
NP_733 HGPPMHSYLPSHPHHPAMMMHGGPPTHPGMTMSAQSPTMLNSVDPNVGGQVMDIHAQ
420 430 440 450 460 470
401 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 15:19:15 2016 done: Thu Nov 3 15:19:16 2016
Total Scan time: 8.710 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]