Result of FASTA (ccds) for
pF1KB4680
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB4680, 522 aa
1>>>pF1KB4680 522 - 522 aa - 522 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.6652+/-0.0014; mu= 2.8529+/- 0.081
mean_var=280.6112+/-62.863, 0's: 0 Z-trim(108.8): 858 B-trim: 457 in 1/50
Lambda= 0.076563
statistics sampled from 9422 (10432) to 9422 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.674), E-opt: 0.2 (0.32), width: 16
Scan time: 3.540
The best scores are: opt bits E(32554)
CCDS1622.1 ZBTB18 gene_id:10472|Hs108|chr1 ( 531) 3510 401.9 9.1e-112
CCDS45174.1 ZBTB42 gene_id:100128927|Hs108|chr14 ( 422) 791 101.5 2e-21
CCDS8034.1 ZBTB3 gene_id:79842|Hs108|chr11 ( 574) 700 91.6 2.6e-18
>>CCDS1622.1 ZBTB18 gene_id:10472|Hs108|chr1 (531 aa)
initn: 3510 init1: 3510 opt: 3510 Z-score: 2120.1 bits: 401.9 E(32554): 9.1e-112
Smith-Waterman score: 3510; 100.0% identity (100.0% similar) in 522 aa overlap (1-522:10-531)
10 20 30 40 50
pF1KB4 MEFPDHSRHLLQCLSEQRHQGFLCDCTVLVGDAQFRAHRAVLASCSMYFHL
:::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 MCPKGYEDSMEFPDHSRHLLQCLSEQRHQGFLCDCTVLVGDAQFRAHRAVLASCSMYFHL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB4 FYKDQLDKRDIVHLNSDIVTAPAFALLLEFMYEGKLQFKDLPIEDVLAAASYLHMYDIVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 FYKDQLDKRDIVHLNSDIVTAPAFALLLEFMYEGKLQFKDLPIEDVLAAASYLHMYDIVK
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB4 VCKKKLKEKATTEADSTKKEEDASSCSDKVESLSDGSSHIAGDLPSDEDEGEDEKLNILP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 VCKKKLKEKATTEADSTKKEEDASSCSDKVESLSDGSSHIAGDLPSDEDEGEDEKLNILP
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB4 SKRDLAAEPGNMWMRLPSDSAGIPQAGGEAEPHATAAGKTVASPCSSTESLSQRSVTSVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 SKRDLAAEPGNMWMRLPSDSAGIPQAGGEAEPHATAAGKTVASPCSSTESLSQRSVTSVR
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB4 DSADVDCVLDLSVKSSLSGVENLNSSYFSSQDVLRSNLVQVKVEKEASCDESDVGTNDYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 DSADVDCVLDLSVKSSLSGVENLNSSYFSSQDVLRSNLVQVKVEKEASCDESDVGTNDYD
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB4 MEHSTVKESVSTNNRVQYEPAHLAPLREDSVLRELDREDKASDDEMMTPESERVQVEGGM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 MEHSTVKESVSTNNRVQYEPAHLAPLREDSVLRELDREDKASDDEMMTPESERVQVEGGM
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB4 ESSLLPYVSNILSPAGQIFMCPLCNKVFPSPHILQIHLSTHFREQDGIRSKPAADVNVPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 ESSLLPYVSNILSPAGQIFMCPLCNKVFPSPHILQIHLSTHFREQDGIRSKPAADVNVPT
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB4 CSLCGKTFSCMYTLKRHERTHSGEKPYTCTQCGKSFQYSHNLSRHAVVHTREKPHACKWC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 CSLCGKTFSCMYTLKRHERTHSGEKPYTCTQCGKSFQYSHNLSRHAVVHTREKPHACKWC
430 440 450 460 470 480
480 490 500 510 520
pF1KB4 ERRFTQSGDLYRHIRKFHCELVNSLSVKSEALSLPTVRDWTLEDSSQELWK
:::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 ERRFTQSGDLYRHIRKFHCELVNSLSVKSEALSLPTVRDWTLEDSSQELWK
490 500 510 520 530
>>CCDS45174.1 ZBTB42 gene_id:100128927|Hs108|chr14 (422 aa)
initn: 1578 init1: 767 opt: 791 Z-score: 498.1 bits: 101.5 E(32554): 2e-21
Smith-Waterman score: 1267; 45.6% identity (63.1% similar) in 502 aa overlap (1-498:1-422)
10 20 30 40 50
pF1KB4 MEFPDHSRHLLQCLSEQRHQGFLCDCTVLVGDAQFRAHRAVLASCSMYFHLFYKDQ-LDK
::::.:. .:: : .::. :::::::::::::.: :::::::.::.::::::.:. .
CCDS45 MEFPEHGGRLLGRLRQQRELGFLCDCTVLVGDARFPAHRAVLAACSVYFHLFYRDRPAGS
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB4 RDIVHLNSDIVTAPAFALLLEFMYEGKLQFKDLPIEDVLAAASYLHMYDIVKVCKKKLKE
:: :.::.::::::::. ::.:::::.:....::.:::::::::::::::::::: .:.:
CCDS45 RDTVRLNGDIVTAPAFGRLLDFMYEGRLDLRSLPVEDVLAAASYLHMYDIVKVCKGRLQE
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB4 KATTEADSTKKEEDASSCSDKVESLSDGSSHIAGDLPSDEDEGEDE-KLNILPSKRDLAA
: :. ::. :. : :.. .. :. :
CCDS45 K------------------DR--SLDPGNP-APGAEPAQPPCPWPVWTADLCPAARKAKL
130 140 150
180 190 200 210 220 230
pF1KB4 EPGNMWMRLPSDSAGIPQAGGEAEPHATAAGKTVASPCSSTESLSQRSVTSVRDSADVDC
: .. :: ..: : ::. : . :
CCDS45 PPFGVKAALPPRASGPP-------------------PCQVPE--------------ESDQ
160 170 180
240 250 260 270 280 290
pF1KB4 VLDLSVKSSLSGVENLNSSYFSSQDVLRSNLVQVKVEKEASCDESDVGTNDY--DMEHST
.::::.::. . ::.. : :.. . :.. : . :
CCDS45 ALDLSLKSGPR------QERVHPPCVLQTPL----------CSQRQPGAQPLVKDERDSL
190 200 210 220 230
300 310 320 330 340 350
pF1KB4 VKESVSTNNRVQYEPAHLAPLREDSVLRELDREDKASDDEMMTPESERVQVEGGMESSLL
.. :...: . : . :. . : . : . :..... .: .:
CCDS45 SEQEESSSSRSPHSPPKPPPVPAAKGLVVGLQPLPLSGEG-----SRELELGAGRLAS--
240 250 260 270 280
360 370 380 390 400 410
pF1KB4 PYVSNILSPAGQIFMCPLCNKVFPSPHILQIHLSTHFREQDGIRSKPAADVNVPTCSLCG
. :.:.: . .::::.:.::: :.::.:::.::::.:. :.. . : .::: :::
CCDS45 ---EDELGPGGPLCICPLCSKLFPSSHVLQLHLSAHFRERDSTRARLSPDGVAPTCPLCG
290 300 310 320 330 340
420 430 440 450 460 470
pF1KB4 KTFSCMYTLKRHERTHSGEKPYTCTQCGKSFQYSHNLSRHAVVHTREKPHACKWCERRFT
::::: ::::::::::::::::::.:::::::::::::::.:::::::::::.:::::::
CCDS45 KTFSCTYTLKRHERTHSGEKPYTCVQCGKSFQYSHNLSRHTVVHTREKPHACRWCERRFT
350 360 370 380 390 400
480 490 500 510 520
pF1KB4 QSGDLYRHIRKFHCELVNSLSVKSEALSLPTVRDWTLEDSSQELWK
::::::::.::::: ::.:: :
CCDS45 QSGDLYRHVRKFHCGLVKSLLV
410 420
>>CCDS8034.1 ZBTB3 gene_id:79842|Hs108|chr11 (574 aa)
initn: 1055 init1: 294 opt: 700 Z-score: 442.2 bits: 91.6 E(32554): 2.6e-18
Smith-Waterman score: 915; 39.3% identity (59.8% similar) in 507 aa overlap (1-491:51-525)
10 20 30
pF1KB4 MEFPDHSRHLLQCLSEQRHQGFLCDCTVLV
::::.::..::: : ::: :::::::::.:
CCDS80 KRSLLRGAVGRYRGATGGDLFWAPFPSWGTMEFPEHSQQLLQSLREQRSQGFLCDCTVMV
30 40 50 60 70 80
40 50 60 70 80
pF1KB4 GDAQFRAHRAVLASCSMYFHLFYKD-QLDKRDIVHLNSDIVTAPAFALLLEFMYEGKLQF
:..:: :::::::::: .:.::::. .:::::.: ....:::::::.:::.::: :.: .
CCDS80 GSTQFLAHRAVLASCSPFFQLFYKERELDKRDLVCIHNEIVTAPAFGLLLDFMYAGQLTL
90 100 110 120 130 140
90 100 110 120 130 140
pF1KB4 K-DLPIEDVLAAASYLHMYDIVKVCKKKLKEKATTEADSTKKEEDASSCSDKVESLSDGS
. : :.:::::::::::: :::::::..:. .: .:::::::::...: ..: ::. :
CCDS80 RGDTPVEDVLAAASYLHMNDIVKVCKRRLQARALAEADSTKKEEETNSQLPSLEFLSSTS
150 160 170 180 190 200
150 160 170 180 190 200
pF1KB4 SHIAGDLPSDEDEGE----DEKLNILPSKRDLAAEPGNMWMRLPSDSAGIPQAGGEAE--
.: : : :. . : . :: . : . : :..: : : :..
CCDS80 RGTQPSLASAETSGHWGKGEWKGSAAPSP--TVRPPDEPPM---SSGADTTQPGMEVDAP
210 220 230 240 250
210 220 230 240 250
pF1KB4 ----PHATAAGKTVASPCSSTESLSQRSVTSVRDSADVDCVLDLSVKSSLSGVENLNSSY
:: .: ..::: ::::.. .: ...... . .:.: : :.:
CCDS80 HLRAPHPPVADVSLASPSSSTETIPTNYFSSGISAVSLEPLPSLDV-----GPESLR--V
260 270 280 290 300
260 270 280 290 300 310
pF1KB4 FSSQDVLRSNLVQVKVEKEASCDESDVGTNDYDMEHSTVKESVSTNNRVQYEPAHLAPLR
.: .. .: :: : . :. : .. . : :.:. ..
CCDS80 VEPKDP--GGPLQ-GFYPPASAPTS---------APAPVSAPVPSQAPAPAE-AELVQVK
310 320 330 340 350
320 330 340 350 360 370
pF1KB4 EDSVLRELDREDKASDDEMMTPESERVQVEGGMESSLLPYVSNILSPAGQIFMCPLCNKV
.... :.: .::.. . : ::. :: . : . . : . ..:
CCDS80 VEAIVIS-DEETDVSDEQPQGP--ERAFPSGGAVYGAQPSQPEAFEDPGAAGL----EEV
360 370 380 390 400
380 390 400 410 420 430
pF1KB4 FPSPHILQI--HLSTHFREQDGIRSKPAADVNVPT-CSLCGKTF-SCMYTLKRHERTHSG
:: :.: :: :. : . . .:. :: . : :
CCDS80 GPSDHFLPTDPHLPYHLLPGAGQYHRGLVTSPLPAPASLHEPLYLSSEYEAAPGSFGVFT
410 420 430 440 450 460
440 450 460 470 480 490
pF1KB4 EKPYTCTQCGKSFQYSHNLSRHAVVHTREKPHACKWCERRFTQSGDLYRHIRKFHCELVN
: :: :::.:. :..: :::.:::::.:. :..: : .:::::::::::: : :
CCDS80 EDVPTCKTCGKTFSCSYTLRRHATVHTRERPYECRYCLRSYTQSGDLYRHIRKAHNEDLA
470 480 490 500 510 520
500 510 520
pF1KB4 SLSVKSEALSLPTVRDWTLEDSSQELWK
CCDS80 KRSKPDPEVGPLLGVQPLPGSPTADRQSSSGGGPPKDFVLAPKTNI
530 540 550 560 570
522 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 15:21:04 2016 done: Thu Nov 3 15:21:04 2016
Total Scan time: 3.540 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]