Result of FASTA (omim) for
pF1KB4690
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB4690, 895 aa
1>>>pF1KB4690 895 - 895 aa - 895 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 13.6745+/-0.000454; mu= -14.7828+/- 0.028
mean_var=582.7352+/-120.468, 0's: 0 Z-trim(125.1): 28 B-trim: 938 in 1/58
Lambda= 0.053130
statistics sampled from 48056 (48117) to 48056 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.804), E-opt: 0.2 (0.564), width: 16
Scan time: 17.770
The best scores are: opt bits E(85289)
NP_006833 (OMIM: 605591) splicing factor 3B subuni ( 895) 6094 482.4 4.2e-135
XP_005273783 (OMIM: 605591) PREDICTED: splicing fa ( 894) 6077 481.1 1e-134
XP_011543042 (OMIM: 605591) PREDICTED: splicing fa ( 894) 6075 480.9 1.1e-134
XP_016872633 (OMIM: 605591) PREDICTED: splicing fa ( 893) 6058 479.6 2.8e-134
>>NP_006833 (OMIM: 605591) splicing factor 3B subunit 2 (895 aa)
initn: 6094 init1: 6094 opt: 6094 Z-score: 2546.5 bits: 482.4 E(85289): 4.2e-135
Smith-Waterman score: 6094; 100.0% identity (100.0% similar) in 895 aa overlap (1-895:1-895)
10 20 30 40 50 60
pF1KB4 MATEHPEPPKAELQLPPPPPPGHYGAWAAQELQAKLAEIGAPIQGNREELVERLQSYTRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MATEHPEPPKAELQLPPPPPPGHYGAWAAQELQAKLAEIGAPIQGNREELVERLQSYTRQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 TGIVLNRPVLRGEDGDKAAPPPMSAQLPGIPMPPPPLGLPPLQPPPPPPPPPPGLGLGFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 TGIVLNRPVLRGEDGDKAAPPPMSAQLPGIPMPPPPLGLPPLQPPPPPPPPPPGLGLGFP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 MAHPPNLGPPPPLRVGEPVALSEEERLKLAQQQAALLMQQEERAKQQGDHSLKEHELLEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MAHPPNLGPPPPLRVGEPVALSEEERLKLAQQQAALLMQQEERAKQQGDHSLKEHELLEQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 QKRAAVLLEQERQQEIAKMGTPVPRPPQDMGQIGVRTPLGPRVAAPVGPVGPTPTVLPMG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 QKRAAVLLEQERQQEIAKMGTPVPRPPQDMGQIGVRTPLGPRVAAPVGPVGPTPTVLPMG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 APVPRPRGPPPPPGDENREMDDPSVGPKIPQALEKILQLKESRQEEMNSQQEEEEMETDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 APVPRPRGPPPPPGDENREMDDPSVGPKIPQALEKILQLKESRQEEMNSQQEEEEMETDA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 RSSLGQSASETEEDTVSVSKKEKNRKRRNRKKKKKPQRVRGVSSESSGDREKDSTRSRGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 RSSLGQSASETEEDTVSVSKKEKNRKRRNRKKKKKPQRVRGVSSESSGDREKDSTRSRGS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB4 DSPAADVEIEYVTEEPEIYEPNFIFFKRIFEAFKLTDDVKKEKEKEPEKLDKLENSAAPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 DSPAADVEIEYVTEEPEIYEPNFIFFKRIFEAFKLTDDVKKEKEKEPEKLDKLENSAAPK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB4 KKGFEEEHKDSDDDSSDDEQEKKPEAPKLSKKKLRRMNRFTVAELKQLVARPDVVEMHDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 KKGFEEEHKDSDDDSSDDEQEKKPEAPKLSKKKLRRMNRFTVAELKQLVARPDVVEMHDV
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB4 TAQDPKLLVHLKATRNSVPVPRHWCFKRKYLQGKRGIEKPPFELPDFIKRTGIQEMREAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 TAQDPKLLVHLKATRNSVPVPRHWCFKRKYLQGKRGIEKPPFELPDFIKRTGIQEMREAL
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB4 QEKEEQKTMKSKMREKVRPKMGKIDIDYQKLHDAFFKWQTKPKLTIHGDLYYEGKEFETR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 QEKEEQKTMKSKMREKVRPKMGKIDIDYQKLHDAFFKWQTKPKLTIHGDLYYEGKEFETR
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB4 LKEKKPGDLSDELRISLGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNSPIPES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 LKEKKPGDLSDELRISLGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNSPIPES
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB4 CSFGYHAGGWGKPPVDETGKPLYGDVFGTNAAEFQTKTEEEEIDRTPWGELEPSDEESSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 CSFGYHAGGWGKPPVDETGKPLYGDVFGTNAAEFQTKTEEEEIDRTPWGELEPSDEESSE
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB4 EEEEEESDEDKPDETGFITPADSGLITPGGFSSVPAGMETPELIELRKKKIEEAMDGSET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 EEEEEESDEDKPDETGFITPADSGLITPGGFSSVPAGMETPELIELRKKKIEEAMDGSET
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB4 PQLFTVLPEKRTATVGGAMMGSTHIYDMSTVMSRKGPAPELQGVEVALAPEELELDPMAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 PQLFTVLPEKRTATVGGAMMGSTHIYDMSTVMSRKGPAPELQGVEVALAPEELELDPMAM
790 800 810 820 830 840
850 860 870 880 890
pF1KB4 TQKYEEHVREQQAQVEKEDFSDMVAEHAAKQKQKKRKAQPQDSRGGSKKYKEFKF
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 TQKYEEHVREQQAQVEKEDFSDMVAEHAAKQKQKKRKAQPQDSRGGSKKYKEFKF
850 860 870 880 890
>>XP_005273783 (OMIM: 605591) PREDICTED: splicing factor (894 aa)
initn: 4601 init1: 4601 opt: 6077 Z-score: 2539.5 bits: 481.1 E(85289): 1e-134
Smith-Waterman score: 6077; 99.9% identity (99.9% similar) in 895 aa overlap (1-895:1-894)
10 20 30 40 50 60
pF1KB4 MATEHPEPPKAELQLPPPPPPGHYGAWAAQELQAKLAEIGAPIQGNREELVERLQSYTRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MATEHPEPPKAELQLPPPPPPGHYGAWAAQELQAKLAEIGAPIQGNREELVERLQSYTRQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 TGIVLNRPVLRGEDGDKAAPPPMSAQLPGIPMPPPPLGLPPLQPPPPPPPPPPGLGLGFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TGIVLNRPVLRGEDGDKAAPPPMSAQLPGIPMPPPPLGLPPLQPPPPPPPPPPGLGLGFP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 MAHPPNLGPPPPLRVGEPVALSEEERLKLAQQQAALLMQQEERAKQQGDHSLKEHELLEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MAHPPNLGPPPPLRVGEPVALSEEERLKLAQQQAALLMQQEERAKQQGDHSLKEHELLEQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 QKRAAVLLEQERQQEIAKMGTPVPRPPQDMGQIGVRTPLGPRVAAPVGPVGPTPTVLPMG
:::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::
XP_005 QKRAAVLLEQERQQEIAKMGTPVPRPPQDMGQIGVRTPLGPR-AAPVGPVGPTPTVLPMG
190 200 210 220 230
250 260 270 280 290 300
pF1KB4 APVPRPRGPPPPPGDENREMDDPSVGPKIPQALEKILQLKESRQEEMNSQQEEEEMETDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 APVPRPRGPPPPPGDENREMDDPSVGPKIPQALEKILQLKESRQEEMNSQQEEEEMETDA
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB4 RSSLGQSASETEEDTVSVSKKEKNRKRRNRKKKKKPQRVRGVSSESSGDREKDSTRSRGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RSSLGQSASETEEDTVSVSKKEKNRKRRNRKKKKKPQRVRGVSSESSGDREKDSTRSRGS
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB4 DSPAADVEIEYVTEEPEIYEPNFIFFKRIFEAFKLTDDVKKEKEKEPEKLDKLENSAAPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DSPAADVEIEYVTEEPEIYEPNFIFFKRIFEAFKLTDDVKKEKEKEPEKLDKLENSAAPK
360 370 380 390 400 410
430 440 450 460 470 480
pF1KB4 KKGFEEEHKDSDDDSSDDEQEKKPEAPKLSKKKLRRMNRFTVAELKQLVARPDVVEMHDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KKGFEEEHKDSDDDSSDDEQEKKPEAPKLSKKKLRRMNRFTVAELKQLVARPDVVEMHDV
420 430 440 450 460 470
490 500 510 520 530 540
pF1KB4 TAQDPKLLVHLKATRNSVPVPRHWCFKRKYLQGKRGIEKPPFELPDFIKRTGIQEMREAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TAQDPKLLVHLKATRNSVPVPRHWCFKRKYLQGKRGIEKPPFELPDFIKRTGIQEMREAL
480 490 500 510 520 530
550 560 570 580 590 600
pF1KB4 QEKEEQKTMKSKMREKVRPKMGKIDIDYQKLHDAFFKWQTKPKLTIHGDLYYEGKEFETR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QEKEEQKTMKSKMREKVRPKMGKIDIDYQKLHDAFFKWQTKPKLTIHGDLYYEGKEFETR
540 550 560 570 580 590
610 620 630 640 650 660
pF1KB4 LKEKKPGDLSDELRISLGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNSPIPES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LKEKKPGDLSDELRISLGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNSPIPES
600 610 620 630 640 650
670 680 690 700 710 720
pF1KB4 CSFGYHAGGWGKPPVDETGKPLYGDVFGTNAAEFQTKTEEEEIDRTPWGELEPSDEESSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CSFGYHAGGWGKPPVDETGKPLYGDVFGTNAAEFQTKTEEEEIDRTPWGELEPSDEESSE
660 670 680 690 700 710
730 740 750 760 770 780
pF1KB4 EEEEEESDEDKPDETGFITPADSGLITPGGFSSVPAGMETPELIELRKKKIEEAMDGSET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EEEEEESDEDKPDETGFITPADSGLITPGGFSSVPAGMETPELIELRKKKIEEAMDGSET
720 730 740 750 760 770
790 800 810 820 830 840
pF1KB4 PQLFTVLPEKRTATVGGAMMGSTHIYDMSTVMSRKGPAPELQGVEVALAPEELELDPMAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PQLFTVLPEKRTATVGGAMMGSTHIYDMSTVMSRKGPAPELQGVEVALAPEELELDPMAM
780 790 800 810 820 830
850 860 870 880 890
pF1KB4 TQKYEEHVREQQAQVEKEDFSDMVAEHAAKQKQKKRKAQPQDSRGGSKKYKEFKF
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TQKYEEHVREQQAQVEKEDFSDMVAEHAAKQKQKKRKAQPQDSRGGSKKYKEFKF
840 850 860 870 880 890
>>XP_011543042 (OMIM: 605591) PREDICTED: splicing factor (894 aa)
initn: 5014 init1: 5014 opt: 6075 Z-score: 2538.7 bits: 480.9 E(85289): 1.1e-134
Smith-Waterman score: 6075; 99.9% identity (99.9% similar) in 895 aa overlap (1-895:1-894)
10 20 30 40 50 60
pF1KB4 MATEHPEPPKAELQLPPPPPPGHYGAWAAQELQAKLAEIGAPIQGNREELVERLQSYTRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MATEHPEPPKAELQLPPPPPPGHYGAWAAQELQAKLAEIGAPIQGNREELVERLQSYTRQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 TGIVLNRPVLRGEDGDKAAPPPMSAQLPGIPMPPPPLGLPPLQPPPPPPPPPPGLGLGFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TGIVLNRPVLRGEDGDKAAPPPMSAQLPGIPMPPPPLGLPPLQPPPPPPPPPPGLGLGFP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 MAHPPNLGPPPPLRVGEPVALSEEERLKLAQQQAALLMQQEERAKQQGDHSLKEHELLEQ
:::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::
XP_011 MAHPPNLGPPPPLRVGEPVALSEEERLKLAQQQAALLMQQEERAKQ-GDHSLKEHELLEQ
130 140 150 160 170
190 200 210 220 230 240
pF1KB4 QKRAAVLLEQERQQEIAKMGTPVPRPPQDMGQIGVRTPLGPRVAAPVGPVGPTPTVLPMG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QKRAAVLLEQERQQEIAKMGTPVPRPPQDMGQIGVRTPLGPRVAAPVGPVGPTPTVLPMG
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB4 APVPRPRGPPPPPGDENREMDDPSVGPKIPQALEKILQLKESRQEEMNSQQEEEEMETDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 APVPRPRGPPPPPGDENREMDDPSVGPKIPQALEKILQLKESRQEEMNSQQEEEEMETDA
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB4 RSSLGQSASETEEDTVSVSKKEKNRKRRNRKKKKKPQRVRGVSSESSGDREKDSTRSRGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RSSLGQSASETEEDTVSVSKKEKNRKRRNRKKKKKPQRVRGVSSESSGDREKDSTRSRGS
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB4 DSPAADVEIEYVTEEPEIYEPNFIFFKRIFEAFKLTDDVKKEKEKEPEKLDKLENSAAPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DSPAADVEIEYVTEEPEIYEPNFIFFKRIFEAFKLTDDVKKEKEKEPEKLDKLENSAAPK
360 370 380 390 400 410
430 440 450 460 470 480
pF1KB4 KKGFEEEHKDSDDDSSDDEQEKKPEAPKLSKKKLRRMNRFTVAELKQLVARPDVVEMHDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KKGFEEEHKDSDDDSSDDEQEKKPEAPKLSKKKLRRMNRFTVAELKQLVARPDVVEMHDV
420 430 440 450 460 470
490 500 510 520 530 540
pF1KB4 TAQDPKLLVHLKATRNSVPVPRHWCFKRKYLQGKRGIEKPPFELPDFIKRTGIQEMREAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TAQDPKLLVHLKATRNSVPVPRHWCFKRKYLQGKRGIEKPPFELPDFIKRTGIQEMREAL
480 490 500 510 520 530
550 560 570 580 590 600
pF1KB4 QEKEEQKTMKSKMREKVRPKMGKIDIDYQKLHDAFFKWQTKPKLTIHGDLYYEGKEFETR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QEKEEQKTMKSKMREKVRPKMGKIDIDYQKLHDAFFKWQTKPKLTIHGDLYYEGKEFETR
540 550 560 570 580 590
610 620 630 640 650 660
pF1KB4 LKEKKPGDLSDELRISLGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNSPIPES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LKEKKPGDLSDELRISLGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNSPIPES
600 610 620 630 640 650
670 680 690 700 710 720
pF1KB4 CSFGYHAGGWGKPPVDETGKPLYGDVFGTNAAEFQTKTEEEEIDRTPWGELEPSDEESSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CSFGYHAGGWGKPPVDETGKPLYGDVFGTNAAEFQTKTEEEEIDRTPWGELEPSDEESSE
660 670 680 690 700 710
730 740 750 760 770 780
pF1KB4 EEEEEESDEDKPDETGFITPADSGLITPGGFSSVPAGMETPELIELRKKKIEEAMDGSET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EEEEEESDEDKPDETGFITPADSGLITPGGFSSVPAGMETPELIELRKKKIEEAMDGSET
720 730 740 750 760 770
790 800 810 820 830 840
pF1KB4 PQLFTVLPEKRTATVGGAMMGSTHIYDMSTVMSRKGPAPELQGVEVALAPEELELDPMAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PQLFTVLPEKRTATVGGAMMGSTHIYDMSTVMSRKGPAPELQGVEVALAPEELELDPMAM
780 790 800 810 820 830
850 860 870 880 890
pF1KB4 TQKYEEHVREQQAQVEKEDFSDMVAEHAAKQKQKKRKAQPQDSRGGSKKYKEFKF
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TQKYEEHVREQQAQVEKEDFSDMVAEHAAKQKQKKRKAQPQDSRGGSKKYKEFKF
840 850 860 870 880 890
>>XP_016872633 (OMIM: 605591) PREDICTED: splicing factor (893 aa)
initn: 4587 init1: 4587 opt: 6058 Z-score: 2531.6 bits: 479.6 E(85289): 2.8e-134
Smith-Waterman score: 6058; 99.8% identity (99.8% similar) in 895 aa overlap (1-895:1-893)
10 20 30 40 50 60
pF1KB4 MATEHPEPPKAELQLPPPPPPGHYGAWAAQELQAKLAEIGAPIQGNREELVERLQSYTRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MATEHPEPPKAELQLPPPPPPGHYGAWAAQELQAKLAEIGAPIQGNREELVERLQSYTRQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 TGIVLNRPVLRGEDGDKAAPPPMSAQLPGIPMPPPPLGLPPLQPPPPPPPPPPGLGLGFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TGIVLNRPVLRGEDGDKAAPPPMSAQLPGIPMPPPPLGLPPLQPPPPPPPPPPGLGLGFP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 MAHPPNLGPPPPLRVGEPVALSEEERLKLAQQQAALLMQQEERAKQQGDHSLKEHELLEQ
:::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::
XP_016 MAHPPNLGPPPPLRVGEPVALSEEERLKLAQQQAALLMQQEERAKQ-GDHSLKEHELLEQ
130 140 150 160 170
190 200 210 220 230 240
pF1KB4 QKRAAVLLEQERQQEIAKMGTPVPRPPQDMGQIGVRTPLGPRVAAPVGPVGPTPTVLPMG
:::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::
XP_016 QKRAAVLLEQERQQEIAKMGTPVPRPPQDMGQIGVRTPLGPR-AAPVGPVGPTPTVLPMG
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB4 APVPRPRGPPPPPGDENREMDDPSVGPKIPQALEKILQLKESRQEEMNSQQEEEEMETDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 APVPRPRGPPPPPGDENREMDDPSVGPKIPQALEKILQLKESRQEEMNSQQEEEEMETDA
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB4 RSSLGQSASETEEDTVSVSKKEKNRKRRNRKKKKKPQRVRGVSSESSGDREKDSTRSRGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RSSLGQSASETEEDTVSVSKKEKNRKRRNRKKKKKPQRVRGVSSESSGDREKDSTRSRGS
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB4 DSPAADVEIEYVTEEPEIYEPNFIFFKRIFEAFKLTDDVKKEKEKEPEKLDKLENSAAPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DSPAADVEIEYVTEEPEIYEPNFIFFKRIFEAFKLTDDVKKEKEKEPEKLDKLENSAAPK
360 370 380 390 400 410
430 440 450 460 470 480
pF1KB4 KKGFEEEHKDSDDDSSDDEQEKKPEAPKLSKKKLRRMNRFTVAELKQLVARPDVVEMHDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KKGFEEEHKDSDDDSSDDEQEKKPEAPKLSKKKLRRMNRFTVAELKQLVARPDVVEMHDV
420 430 440 450 460 470
490 500 510 520 530 540
pF1KB4 TAQDPKLLVHLKATRNSVPVPRHWCFKRKYLQGKRGIEKPPFELPDFIKRTGIQEMREAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TAQDPKLLVHLKATRNSVPVPRHWCFKRKYLQGKRGIEKPPFELPDFIKRTGIQEMREAL
480 490 500 510 520 530
550 560 570 580 590 600
pF1KB4 QEKEEQKTMKSKMREKVRPKMGKIDIDYQKLHDAFFKWQTKPKLTIHGDLYYEGKEFETR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QEKEEQKTMKSKMREKVRPKMGKIDIDYQKLHDAFFKWQTKPKLTIHGDLYYEGKEFETR
540 550 560 570 580 590
610 620 630 640 650 660
pF1KB4 LKEKKPGDLSDELRISLGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNSPIPES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LKEKKPGDLSDELRISLGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNSPIPES
600 610 620 630 640 650
670 680 690 700 710 720
pF1KB4 CSFGYHAGGWGKPPVDETGKPLYGDVFGTNAAEFQTKTEEEEIDRTPWGELEPSDEESSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CSFGYHAGGWGKPPVDETGKPLYGDVFGTNAAEFQTKTEEEEIDRTPWGELEPSDEESSE
660 670 680 690 700 710
730 740 750 760 770 780
pF1KB4 EEEEEESDEDKPDETGFITPADSGLITPGGFSSVPAGMETPELIELRKKKIEEAMDGSET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEEEEESDEDKPDETGFITPADSGLITPGGFSSVPAGMETPELIELRKKKIEEAMDGSET
720 730 740 750 760 770
790 800 810 820 830 840
pF1KB4 PQLFTVLPEKRTATVGGAMMGSTHIYDMSTVMSRKGPAPELQGVEVALAPEELELDPMAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PQLFTVLPEKRTATVGGAMMGSTHIYDMSTVMSRKGPAPELQGVEVALAPEELELDPMAM
780 790 800 810 820 830
850 860 870 880 890
pF1KB4 TQKYEEHVREQQAQVEKEDFSDMVAEHAAKQKQKKRKAQPQDSRGGSKKYKEFKF
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TQKYEEHVREQQAQVEKEDFSDMVAEHAAKQKQKKRKAQPQDSRGGSKKYKEFKF
840 850 860 870 880 890
895 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 03:10:59 2016 done: Fri Nov 4 03:11:02 2016
Total Scan time: 17.770 Total Display time: 0.120
Function used was FASTA [36.3.4 Apr, 2011]