FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB4745, 373 aa 1>>>pF1KB4745 373 - 373 aa - 373 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.8464+/-0.00106; mu= 13.0511+/- 0.063 mean_var=63.0414+/-13.197, 0's: 0 Z-trim(102.8): 24 B-trim: 294 in 1/48 Lambda= 0.161533 statistics sampled from 7095 (7108) to 7095 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.582), E-opt: 0.2 (0.218), width: 16 Scan time: 2.720 The best scores are: opt bits E(32554) CCDS7297.1 AIFM2 gene_id:84883|Hs108|chr10 ( 373) 2365 560.2 1.1e-159 >>CCDS7297.1 AIFM2 gene_id:84883|Hs108|chr10 (373 aa) initn: 2365 init1: 2365 opt: 2365 Z-score: 2980.5 bits: 560.2 E(32554): 1.1e-159 Smith-Waterman score: 2365; 100.0% identity (100.0% similar) in 373 aa overlap (1-373:1-373) 10 20 30 40 50 60 pF1KB4 MGSQVSVESGALHVVIVGGGFGGIAAASQLQALNVPFMLVDMKDSFHHNVAALRASVETG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 MGSQVSVESGALHVVIVGGGFGGIAAASQLQALNVPFMLVDMKDSFHHNVAALRASVETG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB4 FAKKTFISYSVTFKDNFRQGLVVGIDLKNQMVLLQGGEALPFSHLILATGSTGPFPGKFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 FAKKTFISYSVTFKDNFRQGLVVGIDLKNQMVLLQGGEALPFSHLILATGSTGPFPGKFN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB4 EVSSQQAAIQAYEDMVRQVQRSRFIVVVGGGSAGVEMAAEIKTEYPEKEVTLIHSQVALA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 EVSSQQAAIQAYEDMVRQVQRSRFIVVVGGGSAGVEMAAEIKTEYPEKEVTLIHSQVALA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB4 DKELLPSVRQEVKEILLRKGVQLLLSERVSNLEELPLNEYREYIKVQTDKGTEVATNLVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 DKELLPSVRQEVKEILLRKGVQLLLSERVSNLEELPLNEYREYIKVQTDKGTEVATNLVI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB4 LCTGIKINSSAYRKAFESRLASSGALRVNEHLQVEGHSNVYAIGDCADVRTPKMAYLAGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 LCTGIKINSSAYRKAFESRLASSGALRVNEHLQVEGHSNVYAIGDCADVRTPKMAYLAGL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB4 HANIAVANIVNSVKQRPLQAYKPGALTFLLSMGRNDGVGQISGFYVGRLMVRLTKSRDLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 HANIAVANIVNSVKQRPLQAYKPGALTFLLSMGRNDGVGQISGFYVGRLMVRLTKSRDLF 310 320 330 340 350 360 370 pF1KB4 VSTSWKTMRQSPP ::::::::::::: CCDS72 VSTSWKTMRQSPP 370 373 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Thu Nov 3 15:28:14 2016 done: Thu Nov 3 15:28:15 2016 Total Scan time: 2.720 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]