Result of FASTA (omim) for
pF1KB4846
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB4846, 480 aa
1>>>pF1KB4846 480 - 480 aa - 480 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.8285+/-0.000362; mu= -2.2299+/- 0.022
mean_var=251.6268+/-52.944, 0's: 0 Z-trim(121.3): 41 B-trim: 288 in 1/53
Lambda= 0.080853
statistics sampled from 37794 (37835) to 37794 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.761), E-opt: 0.2 (0.444), width: 16
Scan time: 8.450
The best scores are: opt bits E(85289)
NP_001745 (OMIM: 151385,601399) runt-related trans ( 480) 3253 392.5 1.4e-108
XP_011528068 (OMIM: 151385,601399) PREDICTED: runt ( 480) 3253 392.5 1.4e-108
XP_011528069 (OMIM: 151385,601399) PREDICTED: runt ( 467) 3022 365.5 1.8e-100
NP_001001890 (OMIM: 151385,601399) runt-related tr ( 453) 3020 365.3 2.1e-100
XP_005261125 (OMIM: 151385,601399) PREDICTED: runt ( 468) 3020 365.3 2.1e-100
XP_016883976 (OMIM: 151385,601399) PREDICTED: runt ( 429) 2896 350.8 4.5e-96
NP_001265407 (OMIM: 119600,156510,600211) runt-rel ( 485) 1913 236.1 1.6e-61
NP_001015051 (OMIM: 119600,156510,600211) runt-rel ( 499) 1913 236.2 1.7e-61
XP_011513264 (OMIM: 119600,156510,600211) PREDICTE ( 567) 1913 236.2 1.8e-61
XP_011528072 (OMIM: 151385,601399) PREDICTED: runt ( 277) 1810 224.0 4.3e-58
NP_001116079 (OMIM: 151385,601399) runt-related tr ( 250) 1577 196.8 6e-50
XP_011528070 (OMIM: 151385,601399) PREDICTED: runt ( 403) 1451 182.2 2.3e-45
XP_005261126 (OMIM: 151385,601399) PREDICTED: runt ( 416) 1451 182.2 2.4e-45
XP_016866881 (OMIM: 119600,156510,600211) PREDICTE ( 528) 1242 157.9 6.3e-38
XP_016866880 (OMIM: 119600,156510,600211) PREDICTE ( 592) 1242 157.9 6.9e-38
XP_011513262 (OMIM: 119600,156510,600211) PREDICTE ( 610) 1242 157.9 7.1e-38
NP_001019801 (OMIM: 119600,156510,600211) runt-rel ( 521) 1232 156.7 1.4e-37
XP_011513263 (OMIM: 119600,156510,600211) PREDICTE ( 589) 1232 156.8 1.5e-37
XP_011513266 (OMIM: 119600,156510,600211) PREDICTE ( 508) 1223 155.7 2.8e-37
XP_016866882 (OMIM: 119600,156510,600211) PREDICTE ( 438) 1208 153.9 8.5e-37
XP_011513267 (OMIM: 119600,156510,600211) PREDICTE ( 416) 1199 152.8 1.7e-36
NP_001026850 (OMIM: 600210) runt-related transcrip ( 429) 1087 139.8 1.5e-32
XP_005246081 (OMIM: 600210) PREDICTED: runt-relate ( 429) 1087 139.8 1.5e-32
NP_001307601 (OMIM: 600210) runt-related transcrip ( 429) 1087 139.8 1.5e-32
NP_004341 (OMIM: 600210) runt-related transcriptio ( 415) 1083 139.3 2e-32
XP_011540653 (OMIM: 600210) PREDICTED: runt-relate ( 376) 938 122.3 2.3e-27
XP_011513265 (OMIM: 119600,156510,600211) PREDICTE ( 552) 873 114.9 5.9e-25
XP_006715295 (OMIM: 119600,156510,600211) PREDICTE ( 449) 870 114.5 6.4e-25
XP_011513268 (OMIM: 119600,156510,600211) PREDICTE ( 386) 865 113.8 8.5e-25
XP_016866885 (OMIM: 119600,156510,600211) PREDICTE ( 276) 856 112.7 1.4e-24
XP_016866883 (OMIM: 119600,156510,600211) PREDICTE ( 358) 856 112.8 1.7e-24
XP_016866884 (OMIM: 119600,156510,600211) PREDICTE ( 338) 840 110.9 5.8e-24
XP_016858159 (OMIM: 600210) PREDICTED: runt-relate ( 162) 693 93.5 4.7e-19
>>NP_001745 (OMIM: 151385,601399) runt-related transcrip (480 aa)
initn: 3253 init1: 3253 opt: 3253 Z-score: 2070.2 bits: 392.5 E(85289): 1.4e-108
Smith-Waterman score: 3253; 99.8% identity (99.8% similar) in 480 aa overlap (1-480:1-480)
10 20 30 40 50 60
pF1KB4 MASDSIFESFPSYPQCFMRECILGMNPSRDVHDASTSRRFTPPSTALSPGKMSEASPLGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::
NP_001 MASDSIFESFPSYPQCFMRECILGMNPSRDVHDASTSRRFTPPSTALSPGKMSEALPLGA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 PDAGAALAGKLRSGDRSMVEVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PDAGAALAGKLRSGDRSMVEVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 LGDVPDGTLVTVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGDVPDGTLVTVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 TNPPQVATYHRAIKITVDGPREPRRHRQKLDDQTKPGSLSFSERLSELEQLRRTAMRVSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TNPPQVATYHRAIKITVDGPREPRRHRQKLDDQTKPGSLSFSERLSELEQLRRTAMRVSP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 HHPAPTPNPRASLNHSTAFNPQPQSQMQDTRQIQPSPPWSYDQSYQYLGSIASPSVHPAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HHPAPTPNPRASLNHSTAFNPQPQSQMQDTRQIQPSPPWSYDQSYQYLGSIASPSVHPAT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 PISPGRASGMTTLSAELSSRLSTAPDLTAFSDPRQFPALPSISDPRMHYPGAFTYSPTPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PISPGRASGMTTLSAELSSRLSTAPDLTAFSDPRQFPALPSISDPRMHYPGAFTYSPTPV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB4 TSGIGIGMSAMGSATRYHTYLPPPYPGSSQAQGGPFQASSPSYHLYYGASAGSYQFSMVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TSGIGIGMSAMGSATRYHTYLPPPYPGSSQAQGGPFQASSPSYHLYYGASAGSYQFSMVG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB4 GERSPPRILPPCTNASTGSALLNPSLPNQSDVVEAEGSHSNSPTNMAPSARLEEAVWRPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GERSPPRILPPCTNASTGSALLNPSLPNQSDVVEAEGSHSNSPTNMAPSARLEEAVWRPY
430 440 450 460 470 480
>>XP_011528068 (OMIM: 151385,601399) PREDICTED: runt-rel (480 aa)
initn: 3253 init1: 3253 opt: 3253 Z-score: 2070.2 bits: 392.5 E(85289): 1.4e-108
Smith-Waterman score: 3253; 99.8% identity (99.8% similar) in 480 aa overlap (1-480:1-480)
10 20 30 40 50 60
pF1KB4 MASDSIFESFPSYPQCFMRECILGMNPSRDVHDASTSRRFTPPSTALSPGKMSEASPLGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::
XP_011 MASDSIFESFPSYPQCFMRECILGMNPSRDVHDASTSRRFTPPSTALSPGKMSEALPLGA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 PDAGAALAGKLRSGDRSMVEVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PDAGAALAGKLRSGDRSMVEVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 LGDVPDGTLVTVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LGDVPDGTLVTVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 TNPPQVATYHRAIKITVDGPREPRRHRQKLDDQTKPGSLSFSERLSELEQLRRTAMRVSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TNPPQVATYHRAIKITVDGPREPRRHRQKLDDQTKPGSLSFSERLSELEQLRRTAMRVSP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 HHPAPTPNPRASLNHSTAFNPQPQSQMQDTRQIQPSPPWSYDQSYQYLGSIASPSVHPAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HHPAPTPNPRASLNHSTAFNPQPQSQMQDTRQIQPSPPWSYDQSYQYLGSIASPSVHPAT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 PISPGRASGMTTLSAELSSRLSTAPDLTAFSDPRQFPALPSISDPRMHYPGAFTYSPTPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PISPGRASGMTTLSAELSSRLSTAPDLTAFSDPRQFPALPSISDPRMHYPGAFTYSPTPV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB4 TSGIGIGMSAMGSATRYHTYLPPPYPGSSQAQGGPFQASSPSYHLYYGASAGSYQFSMVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TSGIGIGMSAMGSATRYHTYLPPPYPGSSQAQGGPFQASSPSYHLYYGASAGSYQFSMVG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB4 GERSPPRILPPCTNASTGSALLNPSLPNQSDVVEAEGSHSNSPTNMAPSARLEEAVWRPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GERSPPRILPPCTNASTGSALLNPSLPNQSDVVEAEGSHSNSPTNMAPSARLEEAVWRPY
430 440 450 460 470 480
>>XP_011528069 (OMIM: 151385,601399) PREDICTED: runt-rel (467 aa)
initn: 3021 init1: 3021 opt: 3022 Z-score: 1924.8 bits: 365.5 E(85289): 1.8e-100
Smith-Waterman score: 3121; 97.1% identity (97.1% similar) in 480 aa overlap (1-480:1-467)
10 20 30 40 50 60
pF1KB4 MASDSIFESFPSYPQCFMRECILGMNPSRDVHDASTSRRFTPPSTALSPGKMSEASPLGA
::::::::::::::::::: ::::::::::::::::::::::: ::::
XP_011 MASDSIFESFPSYPQCFMR-------------DASTSRRFTPPSTALSPGKMSEALPLGA
10 20 30 40
70 80 90 100 110 120
pF1KB4 PDAGAALAGKLRSGDRSMVEVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PDAGAALAGKLRSGDRSMVEVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVA
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB4 LGDVPDGTLVTVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LGDVPDGTLVTVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVF
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB4 TNPPQVATYHRAIKITVDGPREPRRHRQKLDDQTKPGSLSFSERLSELEQLRRTAMRVSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TNPPQVATYHRAIKITVDGPREPRRHRQKLDDQTKPGSLSFSERLSELEQLRRTAMRVSP
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB4 HHPAPTPNPRASLNHSTAFNPQPQSQMQDTRQIQPSPPWSYDQSYQYLGSIASPSVHPAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HHPAPTPNPRASLNHSTAFNPQPQSQMQDTRQIQPSPPWSYDQSYQYLGSIASPSVHPAT
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB4 PISPGRASGMTTLSAELSSRLSTAPDLTAFSDPRQFPALPSISDPRMHYPGAFTYSPTPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PISPGRASGMTTLSAELSSRLSTAPDLTAFSDPRQFPALPSISDPRMHYPGAFTYSPTPV
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB4 TSGIGIGMSAMGSATRYHTYLPPPYPGSSQAQGGPFQASSPSYHLYYGASAGSYQFSMVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TSGIGIGMSAMGSATRYHTYLPPPYPGSSQAQGGPFQASSPSYHLYYGASAGSYQFSMVG
350 360 370 380 390 400
430 440 450 460 470 480
pF1KB4 GERSPPRILPPCTNASTGSALLNPSLPNQSDVVEAEGSHSNSPTNMAPSARLEEAVWRPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GERSPPRILPPCTNASTGSALLNPSLPNQSDVVEAEGSHSNSPTNMAPSARLEEAVWRPY
410 420 430 440 450 460
>>NP_001001890 (OMIM: 151385,601399) runt-related transc (453 aa)
initn: 3020 init1: 3020 opt: 3020 Z-score: 1923.7 bits: 365.3 E(85289): 2.1e-100
Smith-Waterman score: 3020; 99.8% identity (99.8% similar) in 448 aa overlap (33-480:6-453)
10 20 30 40 50 60
pF1KB4 SDSIFESFPSYPQCFMRECILGMNPSRDVHDASTSRRFTPPSTALSPGKMSEASPLGAPD
::::::::::::::::::::::: ::::::
NP_001 MRIPVDASTSRRFTPPSTALSPGKMSEALPLGAPD
10 20 30
70 80 90 100 110 120
pF1KB4 AGAALAGKLRSGDRSMVEVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AGAALAGKLRSGDRSMVEVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALG
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB4 DVPDGTLVTVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DVPDGTLVTVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTN
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB4 PPQVATYHRAIKITVDGPREPRRHRQKLDDQTKPGSLSFSERLSELEQLRRTAMRVSPHH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPQVATYHRAIKITVDGPREPRRHRQKLDDQTKPGSLSFSERLSELEQLRRTAMRVSPHH
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB4 PAPTPNPRASLNHSTAFNPQPQSQMQDTRQIQPSPPWSYDQSYQYLGSIASPSVHPATPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PAPTPNPRASLNHSTAFNPQPQSQMQDTRQIQPSPPWSYDQSYQYLGSIASPSVHPATPI
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB4 SPGRASGMTTLSAELSSRLSTAPDLTAFSDPRQFPALPSISDPRMHYPGAFTYSPTPVTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPGRASGMTTLSAELSSRLSTAPDLTAFSDPRQFPALPSISDPRMHYPGAFTYSPTPVTS
280 290 300 310 320 330
370 380 390 400 410 420
pF1KB4 GIGIGMSAMGSATRYHTYLPPPYPGSSQAQGGPFQASSPSYHLYYGASAGSYQFSMVGGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GIGIGMSAMGSATRYHTYLPPPYPGSSQAQGGPFQASSPSYHLYYGASAGSYQFSMVGGE
340 350 360 370 380 390
430 440 450 460 470 480
pF1KB4 RSPPRILPPCTNASTGSALLNPSLPNQSDVVEAEGSHSNSPTNMAPSARLEEAVWRPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RSPPRILPPCTNASTGSALLNPSLPNQSDVVEAEGSHSNSPTNMAPSARLEEAVWRPY
400 410 420 430 440 450
>>XP_005261125 (OMIM: 151385,601399) PREDICTED: runt-rel (468 aa)
initn: 3020 init1: 3020 opt: 3020 Z-score: 1923.5 bits: 365.3 E(85289): 2.1e-100
Smith-Waterman score: 3020; 99.8% identity (99.8% similar) in 448 aa overlap (33-480:21-468)
10 20 30 40 50 60
pF1KB4 SDSIFESFPSYPQCFMRECILGMNPSRDVHDASTSRRFTPPSTALSPGKMSEASPLGAPD
::::::::::::::::::::::: ::::::
XP_005 MPAAPRGPAQGEAAARTRSRDASTSRRFTPPSTALSPGKMSEALPLGAPD
10 20 30 40 50
70 80 90 100 110 120
pF1KB4 AGAALAGKLRSGDRSMVEVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AGAALAGKLRSGDRSMVEVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALG
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB4 DVPDGTLVTVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DVPDGTLVTVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTN
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB4 PPQVATYHRAIKITVDGPREPRRHRQKLDDQTKPGSLSFSERLSELEQLRRTAMRVSPHH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PPQVATYHRAIKITVDGPREPRRHRQKLDDQTKPGSLSFSERLSELEQLRRTAMRVSPHH
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB4 PAPTPNPRASLNHSTAFNPQPQSQMQDTRQIQPSPPWSYDQSYQYLGSIASPSVHPATPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PAPTPNPRASLNHSTAFNPQPQSQMQDTRQIQPSPPWSYDQSYQYLGSIASPSVHPATPI
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB4 SPGRASGMTTLSAELSSRLSTAPDLTAFSDPRQFPALPSISDPRMHYPGAFTYSPTPVTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SPGRASGMTTLSAELSSRLSTAPDLTAFSDPRQFPALPSISDPRMHYPGAFTYSPTPVTS
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB4 GIGIGMSAMGSATRYHTYLPPPYPGSSQAQGGPFQASSPSYHLYYGASAGSYQFSMVGGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GIGIGMSAMGSATRYHTYLPPPYPGSSQAQGGPFQASSPSYHLYYGASAGSYQFSMVGGE
360 370 380 390 400 410
430 440 450 460 470 480
pF1KB4 RSPPRILPPCTNASTGSALLNPSLPNQSDVVEAEGSHSNSPTNMAPSARLEEAVWRPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RSPPRILPPCTNASTGSALLNPSLPNQSDVVEAEGSHSNSPTNMAPSARLEEAVWRPY
420 430 440 450 460
>>XP_016883976 (OMIM: 151385,601399) PREDICTED: runt-rel (429 aa)
initn: 2896 init1: 2896 opt: 2896 Z-score: 1845.8 bits: 350.8 E(85289): 4.5e-96
Smith-Waterman score: 2896; 99.8% identity (99.8% similar) in 429 aa overlap (52-480:1-429)
30 40 50 60 70 80
pF1KB4 ILGMNPSRDVHDASTSRRFTPPSTALSPGKMSEASPLGAPDAGAALAGKLRSGDRSMVEV
:::: :::::::::::::::::::::::::
XP_016 MSEALPLGAPDAGAALAGKLRSGDRSMVEV
10 20 30
90 100 110 120 130 140
pF1KB4 LADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYS
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB4 AELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPR
100 110 120 130 140 150
210 220 230 240 250 260
pF1KB4 EPRRHRQKLDDQTKPGSLSFSERLSELEQLRRTAMRVSPHHPAPTPNPRASLNHSTAFNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EPRRHRQKLDDQTKPGSLSFSERLSELEQLRRTAMRVSPHHPAPTPNPRASLNHSTAFNP
160 170 180 190 200 210
270 280 290 300 310 320
pF1KB4 QPQSQMQDTRQIQPSPPWSYDQSYQYLGSIASPSVHPATPISPGRASGMTTLSAELSSRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QPQSQMQDTRQIQPSPPWSYDQSYQYLGSIASPSVHPATPISPGRASGMTTLSAELSSRL
220 230 240 250 260 270
330 340 350 360 370 380
pF1KB4 STAPDLTAFSDPRQFPALPSISDPRMHYPGAFTYSPTPVTSGIGIGMSAMGSATRYHTYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 STAPDLTAFSDPRQFPALPSISDPRMHYPGAFTYSPTPVTSGIGIGMSAMGSATRYHTYL
280 290 300 310 320 330
390 400 410 420 430 440
pF1KB4 PPPYPGSSQAQGGPFQASSPSYHLYYGASAGSYQFSMVGGERSPPRILPPCTNASTGSAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PPPYPGSSQAQGGPFQASSPSYHLYYGASAGSYQFSMVGGERSPPRILPPCTNASTGSAL
340 350 360 370 380 390
450 460 470 480
pF1KB4 LNPSLPNQSDVVEAEGSHSNSPTNMAPSARLEEAVWRPY
:::::::::::::::::::::::::::::::::::::::
XP_016 LNPSLPNQSDVVEAEGSHSNSPTNMAPSARLEEAVWRPY
400 410 420
>>NP_001265407 (OMIM: 119600,156510,600211) runt-related (485 aa)
initn: 1554 init1: 880 opt: 1913 Z-score: 1225.4 bits: 236.1 E(85289): 1.6e-61
Smith-Waterman score: 1963; 62.9% identity (80.3% similar) in 493 aa overlap (33-480:6-485)
10 20 30 40 50
pF1KB4 SDSIFESFPSYPQCFMRECILGMNPSRDVHDASTSRRFTPPSTALSPGKMSEASPL----
: ::::::.:::..:.:::::..::.
NP_001 MRIPVDPSTSRRFSPPSSSLQPGKMSDVSPVVAAQ
10 20 30
60 70 80
pF1KB4 -------------------------------GAPDAGAALAGKLRS--GDRSMVEVLADH
.: :.:: . .:: .:.:::..:::
NP_001 QQQQQQQQQQQQQQQQQQQQQQEAAAAAAAAAAAAAAAAAVPRLRPPHDNRTMVEIIADH
40 50 60 70 80 90
90 100 110 120 130 140
pF1KB4 PGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAELR
:.::::::::::::::::.:::::::::.::::::::.:::::.::::::::::::::::
NP_001 PAELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGEVPDGTVVTVMAGNDENYSAELR
100 110 120 130 140 150
150 160 170 180 190 200
pF1KB4 NATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPRR
::.:.::::::::::::::::::::::::::::::::::::::::::::.::::::::::
NP_001 NASAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKVTVDGPREPRR
160 170 180 190 200 210
210 220 230 240 250 260
pF1KB4 HRQKLDDQTKPGSLSFSERLSELEQLRRTAMRVSPHHPAPTPNPRASLNHS-TAFNPQPQ
::::::: .:: :: ::.:::.: .. . .:::. .: ::: ::: . . :::: :
NP_001 HRQKLDD-SKP-SL-FSDRLSDLGRIPHPSMRVG----VPPQNPRPSLNSAPSPFNPQGQ
220 230 240 250 260
270 280 290 300 310 320
pF1KB4 SQMQDTRQIQPSPPWSYDQSY-QYLGSIASPSVHPATPISPGRASGMTTLSAELSSRLST
::. : :: : :::::::::: .::....:::.: .::.: :..:. ... .. :.:
NP_001 SQITDPRQAQSSPPWSYDQSYPSYLSQMTSPSIHSTTPLSSTRGTGLPAIT-DVPRRISG
270 280 290 300 310 320
330 340 350 360 370
pF1KB4 APDLTAFSDPRQFPALPSI-----SDPRMHYPGAFTYSPTPVTSGIGIGMSAMGSATRYH
: .: ::::::::.. :. :.::::::..:::.: :::::...:::: .:.::
NP_001 ASELGPFSDPRQFPSISSLTESRFSNPRMHYPATFTYTP-PVTSGMSLGMSA---TTHYH
330 340 350 360 370 380
380 390 400 410 420 430
pF1KB4 TYLPPPYPGSSQAQGGPFQASSPSYHLYYGASAGSYQFSMV-GGERSPPRILPPCTNAST
::::::::::::.:.::::.:: : ::::.:.::::: :: ::.::: :.:::::..:.
NP_001 TYLPPPYPGSSQSQSGPFQTSSTPY-LYYGTSSGSYQFPMVPGGDRSPSRMLPPCTTTSN
390 400 410 420 430 440
440 450 460 470 480
pF1KB4 GSALLNPSLPNQSDVVEAEGSHSNSPTNMAPSARLEEAVWRPY
::.::::.::::.: :.:.::::.::: . :.:..:.:::::
NP_001 GSTLLNPNLPNQNDGVDADGSHSSSPTVLNSSGRMDESVWRPY
450 460 470 480
>>NP_001015051 (OMIM: 119600,156510,600211) runt-related (499 aa)
initn: 1554 init1: 880 opt: 1913 Z-score: 1225.2 bits: 236.2 E(85289): 1.7e-61
Smith-Waterman score: 1965; 60.4% identity (77.5% similar) in 525 aa overlap (1-480:1-499)
10 20 30 40 50
pF1KB4 MASDSIFESFPSYPQCFMRECILGMNPSRDVHDASTSRRFTPPSTALSPGKMSEASPL--
:::.:.: . : :. : ::::::.:::..:.:::::..::.
NP_001 MASNSLFSTVTPCQQNFFW-------------DPSTSRRFSPPSSSLQPGKMSDVSPVVA
10 20 30 40
60 70 80
pF1KB4 ---------------------------------GAPDAGAALAGKLRS--GDRSMVEVLA
.: :.:: . .:: .:.:::..:
NP_001 AQQQQQQQQQQQQQQQQQQQQQQQEAAAAAAAAAAAAAAAAAVPRLRPPHDNRTMVEIIA
50 60 70 80 90 100
90 100 110 120 130 140
pF1KB4 DHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAE
:::.::::::::::::::::.:::::::::.::::::::.:::::.::::::::::::::
NP_001 DHPAELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGEVPDGTVVTVMAGNDENYSAE
110 120 130 140 150 160
150 160 170 180 190 200
pF1KB4 LRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREP
::::.:.::::::::::::::::::::::::::::::::::::::::::::.::::::::
NP_001 LRNASAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKVTVDGPREP
170 180 190 200 210 220
210 220 230 240 250 260
pF1KB4 RRHRQKLDDQTKPGSLSFSERLSELEQLRRTAMRVSPHHPAPTPNPRASLNHS-TAFNPQ
::::::::: .:: :: ::.:::.: .. . .:::. .: ::: ::: . . ::::
NP_001 RRHRQKLDD-SKP-SL-FSDRLSDLGRIPHPSMRVG----VPPQNPRPSLNSAPSPFNPQ
230 240 250 260 270 280
270 280 290 300 310 320
pF1KB4 PQSQMQDTRQIQPSPPWSYDQSY-QYLGSIASPSVHPATPISPGRASGMTTLSAELSSRL
:::. : :: : :::::::::: .::....:::.: .::.: :..:. ... .. :.
NP_001 GQSQITDPRQAQSSPPWSYDQSYPSYLSQMTSPSIHSTTPLSSTRGTGLPAIT-DVPRRI
290 300 310 320 330
330 340 350 360 370
pF1KB4 STAPDLTAFSDPRQFPALPSI-----SDPRMHYPGAFTYSPTPVTSGIGIGMSAMGSATR
: : .: ::::::::.. :. :.::::::..:::.: :::::...:::: .:.
NP_001 SGASELGPFSDPRQFPSISSLTESRFSNPRMHYPATFTYTP-PVTSGMSLGMSA---TTH
340 350 360 370 380 390
380 390 400 410 420 430
pF1KB4 YHTYLPPPYPGSSQAQGGPFQASSPSYHLYYGASAGSYQFSMV-GGERSPPRILPPCTNA
::::::::::::::.:.::::.:: : ::::.:.::::: :: ::.::: :.:::::..
NP_001 YHTYLPPPYPGSSQSQSGPFQTSSTPY-LYYGTSSGSYQFPMVPGGDRSPSRMLPPCTTT
400 410 420 430 440 450
440 450 460 470 480
pF1KB4 STGSALLNPSLPNQSDVVEAEGSHSNSPTNMAPSARLEEAVWRPY
:.::.::::.::::.: :.:.::::.::: . :.:..:.:::::
NP_001 SNGSTLLNPNLPNQNDGVDADGSHSSSPTVLNSSGRMDESVWRPY
460 470 480 490
>>XP_011513264 (OMIM: 119600,156510,600211) PREDICTED: r (567 aa)
initn: 1554 init1: 880 opt: 1913 Z-score: 1224.4 bits: 236.2 E(85289): 1.8e-61
Smith-Waterman score: 1965; 60.4% identity (77.5% similar) in 525 aa overlap (1-480:69-567)
10 20 30
pF1KB4 MASDSIFESFPSYPQCFMRECILGMNPSRD
:::.:.: . : :.
XP_011 QPPRPTESFKAASSIYNRGYKFYLKKKGGTMASNSLFSTVTPCQQNFFW-----------
40 50 60 70 80
40 50
pF1KB4 VHDASTSRRFTPPSTALSPGKMSEASPL--------------------------------
: ::::::.:::..:.:::::..::.
XP_011 --DPSTSRRFSPPSSSLQPGKMSDVSPVVAAQQQQQQQQQQQQQQQQQQQQQQQEAAAAA
90 100 110 120 130 140
60 70 80 90 100 110
pF1KB4 ---GAPDAGAALAGKLRS--GDRSMVEVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLP
.: :.:: . .:: .:.:::..::::.::::::::::::::::.:::::::::
XP_011 AAAAAAAAAAAAVPRLRPPHDNRTMVEIIADHPAELVRTDSPNFLCSVLPSHWRCNKTLP
150 160 170 180 190 200
120 130 140 150 160 170
pF1KB4 IAFKVVALGDVPDGTLVTVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSF
.::::::::.:::::.::::::::::::::::::.:.:::::::::::::::::::::::
XP_011 VAFKVVALGEVPDGTVVTVMAGNDENYSAELRNASAVMKNQVARFNDLRFVGRSGRGKSF
210 220 230 240 250 260
180 190 200 210 220 230
pF1KB4 TLTITVFTNPPQVATYHRAIKITVDGPREPRRHRQKLDDQTKPGSLSFSERLSELEQLRR
:::::::::::::::::::::.::::::::::::::::: .:: :: ::.:::.: .. .
XP_011 TLTITVFTNPPQVATYHRAIKVTVDGPREPRRHRQKLDD-SKP-SL-FSDRLSDLGRIPH
270 280 290 300 310 320
240 250 260 270 280 290
pF1KB4 TAMRVSPHHPAPTPNPRASLNHS-TAFNPQPQSQMQDTRQIQPSPPWSYDQSY-QYLGSI
.:::. .: ::: ::: . . :::: :::. : :: : :::::::::: .::...
XP_011 PSMRVG----VPPQNPRPSLNSAPSPFNPQGQSQITDPRQAQSSPPWSYDQSYPSYLSQM
330 340 350 360 370
300 310 320 330 340
pF1KB4 ASPSVHPATPISPGRASGMTTLSAELSSRLSTAPDLTAFSDPRQFPALPSI-----SDPR
.:::.: .::.: :..:. ... .. :.: : .: ::::::::.. :. :.::
XP_011 TSPSIHSTTPLSSTRGTGLPAIT-DVPRRISGASELGPFSDPRQFPSISSLTESRFSNPR
380 390 400 410 420 430
350 360 370 380 390 400
pF1KB4 MHYPGAFTYSPTPVTSGIGIGMSAMGSATRYHTYLPPPYPGSSQAQGGPFQASSPSYHLY
::::..:::.: :::::...:::: .:.::::::::::::::.:.::::.:: : ::
XP_011 MHYPATFTYTP-PVTSGMSLGMSA---TTHYHTYLPPPYPGSSQSQSGPFQTSSTPY-LY
440 450 460 470 480 490
410 420 430 440 450 460
pF1KB4 YGASAGSYQFSMV-GGERSPPRILPPCTNASTGSALLNPSLPNQSDVVEAEGSHSNSPTN
::.:.::::: :: ::.::: :.:::::..:.::.::::.::::.: :.:.::::.:::
XP_011 YGTSSGSYQFPMVPGGDRSPSRMLPPCTTTSNGSTLLNPNLPNQNDGVDADGSHSSSPTV
500 510 520 530 540 550
470 480
pF1KB4 MAPSARLEEAVWRPY
. :.:..:.:::::
XP_011 LNSSGRMDESVWRPY
560
>>XP_011528072 (OMIM: 151385,601399) PREDICTED: runt-rel (277 aa)
initn: 1801 init1: 1801 opt: 1810 Z-score: 1163.9 bits: 224.0 E(85289): 4.3e-58
Smith-Waterman score: 1810; 96.4% identity (97.5% similar) in 279 aa overlap (1-279:1-275)
10 20 30 40 50 60
pF1KB4 MASDSIFESFPSYPQCFMRECILGMNPSRDVHDASTSRRFTPPSTALSPGKMSEASPLGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::
XP_011 MASDSIFESFPSYPQCFMRECILGMNPSRDVHDASTSRRFTPPSTALSPGKMSEALPLGA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 PDAGAALAGKLRSGDRSMVEVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PDAGAALAGKLRSGDRSMVEVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 LGDVPDGTLVTVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LGDVPDGTLVTVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 TNPPQVATYHRAIKITVDGPREPRRHRQKLDDQTKPGSLSFSERLSELEQLRRTAMRVSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TNPPQVATYHRAIKITVDGPREPRRHRQKLDDQTKPGSLSFSERLSELEQLRRTAMRVSP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 HHPAPTPNPRASLNHSTAFNPQPQSQMQDTRQIQPSPPWSYDQSYQYLGSIASPSVHPAT
::::::::::::::::::::::::::::. . . ::
XP_011 HHPAPTPNPRASLNHSTAFNPQPQSQMQE----EDTAPWRC
250 260 270
310 320 330 340 350 360
pF1KB4 PISPGRASGMTTLSAELSSRLSTAPDLTAFSDPRQFPALPSISDPRMHYPGAFTYSPTPV
480 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 21:46:48 2016 done: Thu Nov 3 21:46:49 2016
Total Scan time: 8.450 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]