Result of FASTA (omim) for
pF1KB5008
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5008, 294 aa
1>>>pF1KB5008 294 - 294 aa - 294 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.6874+/-0.000404; mu= 18.9372+/- 0.025
mean_var=65.6848+/-13.139, 0's: 0 Z-trim(112.5): 83 B-trim: 0 in 0/49
Lambda= 0.158249
statistics sampled from 21406 (21500) to 21406 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.614), E-opt: 0.2 (0.252), width: 16
Scan time: 6.100
The best scores are: opt bits E(85289)
NP_036471 (OMIM: 613140) tetraspanin-15 [Homo sapi ( 294) 1991 463.4 2.4e-130
XP_011537864 (OMIM: 613140) PREDICTED: tetraspanin ( 178) 1235 290.6 1.5e-78
XP_005269724 (OMIM: 613140) PREDICTED: tetraspanin ( 207) 1233 290.2 2.3e-78
XP_005269723 (OMIM: 613140) PREDICTED: tetraspanin ( 229) 1233 290.2 2.5e-78
XP_011537865 (OMIM: 613140) PREDICTED: tetraspanin ( 150) 1064 251.5 7.4e-67
XP_016871499 (OMIM: 613140) PREDICTED: tetraspanin ( 272) 974 231.2 1.8e-60
NP_848657 (OMIM: 610120) tetraspanin-33 [Homo sapi ( 283) 671 162.0 1.2e-39
XP_006716023 (OMIM: 610120) PREDICTED: tetraspanin ( 282) 661 159.7 5.9e-39
NP_005714 (OMIM: 613136) tetraspanin-5 [Homo sapie ( 268) 594 144.4 2.3e-34
XP_005262737 (OMIM: 613136) PREDICTED: tetraspanin ( 219) 450 111.4 1.6e-24
NP_620599 (OMIM: 179620,602243,609057) CD151 antig ( 253) 342 86.8 4.6e-17
NP_620598 (OMIM: 179620,602243,609057) CD151 antig ( 253) 342 86.8 4.6e-17
NP_004348 (OMIM: 179620,602243,609057) CD151 antig ( 253) 342 86.8 4.6e-17
NP_001034579 (OMIM: 179620,602243,609057) CD151 an ( 253) 342 86.8 4.6e-17
NP_003261 (OMIM: 300191) tetraspanin-6 isoform a [ ( 245) 340 86.4 6.1e-17
NP_004606 (OMIM: 300096,300210) tetraspanin-7 [Hom ( 249) 322 82.3 1.1e-15
NP_001161792 (OMIM: 613137) tetraspanin-9 [Homo sa ( 239) 297 76.5 5.4e-14
NP_006666 (OMIM: 613137) tetraspanin-9 [Homo sapie ( 239) 297 76.5 5.4e-14
NP_001254627 (OMIM: 155740) CD63 antigen isoform A ( 238) 295 76.1 7.4e-14
NP_001244320 (OMIM: 155740) CD63 antigen isoform A ( 238) 295 76.1 7.4e-14
NP_001244319 (OMIM: 155740) CD63 antigen isoform A ( 238) 295 76.1 7.4e-14
NP_001244318 (OMIM: 155740) CD63 antigen isoform A ( 238) 295 76.1 7.4e-14
NP_001771 (OMIM: 155740) CD63 antigen isoform A [H ( 238) 295 76.1 7.4e-14
NP_001244321 (OMIM: 155740) CD63 antigen isoform C ( 215) 285 73.8 3.4e-13
XP_005253159 (OMIM: 602644) PREDICTED: tetraspanin ( 238) 279 72.4 9.4e-13
NP_001020409 (OMIM: 602644) tetraspanin-4 isoform ( 238) 279 72.4 9.4e-13
NP_001020405 (OMIM: 602644) tetraspanin-4 isoform ( 238) 279 72.4 9.4e-13
NP_003262 (OMIM: 602644) tetraspanin-4 isoform a [ ( 238) 279 72.4 9.4e-13
NP_001020406 (OMIM: 602644) tetraspanin-4 isoform ( 238) 279 72.4 9.4e-13
NP_001020408 (OMIM: 602644) tetraspanin-4 isoform ( 238) 279 72.4 9.4e-13
NP_001020407 (OMIM: 602644) tetraspanin-4 isoform ( 238) 279 72.4 9.4e-13
XP_006718286 (OMIM: 176807,600623) PREDICTED: CD82 ( 267) 270 70.4 4.2e-12
NP_002222 (OMIM: 176807,600623) CD82 antigen isofo ( 267) 270 70.4 4.2e-12
NP_005715 (OMIM: 613134) tetraspanin-3 isoform 1 [ ( 253) 263 68.8 1.2e-11
NP_005718 (OMIM: 613170) tetraspanin-1 [Homo sapie ( 241) 257 67.4 3.1e-11
XP_011538762 (OMIM: 613170) PREDICTED: tetraspanin ( 258) 257 67.4 3.2e-11
NP_000551 (OMIM: 151525) leukocyte surface antigen ( 219) 255 66.9 3.9e-11
NP_001035122 (OMIM: 151525) leukocyte surface anti ( 219) 255 66.9 3.9e-11
XP_011518638 (OMIM: 602644) PREDICTED: tetraspanin ( 269) 234 62.2 1.3e-09
XP_011518369 (OMIM: 176807,600623) PREDICTED: CD82 ( 236) 221 59.2 9e-09
NP_001244329 (OMIM: 155740) CD63 antigen isoform D ( 156) 209 56.3 4.4e-08
NP_001244330 (OMIM: 155740) CD63 antigen isoform D ( 156) 209 56.3 4.4e-08
XP_011529320 (OMIM: 300191) PREDICTED: tetraspanin ( 157) 202 54.7 1.3e-07
NP_001265669 (OMIM: 300191) tetraspanin-6 isoform ( 157) 202 54.7 1.3e-07
NP_001265670 (OMIM: 300191) tetraspanin-6 isoform ( 157) 202 54.7 1.3e-07
NP_001265671 (OMIM: 300191) tetraspanin-6 isoform ( 137) 199 54.0 2e-07
NP_001265672 (OMIM: 300191) tetraspanin-6 isoform ( 129) 194 52.8 4.1e-07
XP_011519214 (OMIM: 613137) PREDICTED: tetraspanin ( 175) 187 51.3 1.6e-06
XP_011519215 (OMIM: 613137) PREDICTED: tetraspanin ( 175) 187 51.3 1.6e-06
NP_001020015 (OMIM: 176807,600623) CD82 antigen is ( 242) 188 51.7 1.7e-06
>>NP_036471 (OMIM: 613140) tetraspanin-15 [Homo sapiens] (294 aa)
initn: 1991 init1: 1991 opt: 1991 Z-score: 2461.1 bits: 463.4 E(85289): 2.4e-130
Smith-Waterman score: 1991; 100.0% identity (100.0% similar) in 294 aa overlap (1-294:1-294)
10 20 30 40 50 60
pF1KB5 MPRGDSEQVRYCARFSYLWLKFSLIIYSTVFWLIGALVLSVGIYAEVERQKYKTLESAFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 MPRGDSEQVRYCARFSYLWLKFSLIIYSTVFWLIGALVLSVGIYAEVERQKYKTLESAFL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 APAIILILLGVVMFMVSFIGVLASLRDNLYLLQAFMYILGICLIMELIGGVVALTFRNQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 APAIILILLGVVMFMVSFIGVLASLRDNLYLLQAFMYILGICLIMELIGGVVALTFRNQT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 IDFLNDNIRRGIENYYDDLDFKNIMDFVQKKFKCCGGEDYRDWSKNQYHDCSAPGPLACG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 IDFLNDNIRRGIENYYDDLDFKNIMDFVQKKFKCCGGEDYRDWSKNQYHDCSAPGPLACG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 VPYTCCIRNTTEVVNTMCGYKTIDKERFSVQDVIYVRGCTNAVIIWFMDNYTIMAGILLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 VPYTCCIRNTTEVVNTMCGYKTIDKERFSVQDVIYVRGCTNAVIIWFMDNYTIMAGILLG
190 200 210 220 230 240
250 260 270 280 290
pF1KB5 ILLPQFLGVLLTLLYITRVEDIIMEHSVTDGLLGPGAKPSVEAAGTGCCLCYPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 ILLPQFLGVLLTLLYITRVEDIIMEHSVTDGLLGPGAKPSVEAAGTGCCLCYPN
250 260 270 280 290
>>XP_011537864 (OMIM: 613140) PREDICTED: tetraspanin-15 (178 aa)
initn: 1235 init1: 1235 opt: 1235 Z-score: 1531.2 bits: 290.6 E(85289): 1.5e-78
Smith-Waterman score: 1235; 99.4% identity (100.0% similar) in 176 aa overlap (119-294:3-178)
90 100 110 120 130 140
pF1KB5 LYLLQAFMYILGICLIMELIGGVVALTFRNQTIDFLNDNIRRGIENYYDDLDFKNIMDFV
.:::::::::::::::::::::::::::::
XP_011 MRETIDFLNDNIRRGIENYYDDLDFKNIMDFV
10 20 30
150 160 170 180 190 200
pF1KB5 QKKFKCCGGEDYRDWSKNQYHDCSAPGPLACGVPYTCCIRNTTEVVNTMCGYKTIDKERF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QKKFKCCGGEDYRDWSKNQYHDCSAPGPLACGVPYTCCIRNTTEVVNTMCGYKTIDKERF
40 50 60 70 80 90
210 220 230 240 250 260
pF1KB5 SVQDVIYVRGCTNAVIIWFMDNYTIMAGILLGILLPQFLGVLLTLLYITRVEDIIMEHSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SVQDVIYVRGCTNAVIIWFMDNYTIMAGILLGILLPQFLGVLLTLLYITRVEDIIMEHSV
100 110 120 130 140 150
270 280 290
pF1KB5 TDGLLGPGAKPSVEAAGTGCCLCYPN
::::::::::::::::::::::::::
XP_011 TDGLLGPGAKPSVEAAGTGCCLCYPN
160 170
>>XP_005269724 (OMIM: 613140) PREDICTED: tetraspanin-15 (207 aa)
initn: 1233 init1: 1233 opt: 1233 Z-score: 1527.9 bits: 290.2 E(85289): 2.3e-78
Smith-Waterman score: 1278; 70.4% identity (70.4% similar) in 294 aa overlap (1-294:1-207)
10 20 30 40 50 60
pF1KB5 MPRGDSEQVRYCARFSYLWLKFSLIIYSTVFWLIGALVLSVGIYAEVERQKYKTLESAFL
::::::::::::::::::::::::::::::::
XP_005 MPRGDSEQVRYCARFSYLWLKFSLIIYSTVFW----------------------------
10 20 30
70 80 90 100 110 120
pF1KB5 APAIILILLGVVMFMVSFIGVLASLRDNLYLLQAFMYILGICLIMELIGGVVALTFRNQT
:
XP_005 -----------------------------------------------------------T
130 140 150 160 170 180
pF1KB5 IDFLNDNIRRGIENYYDDLDFKNIMDFVQKKFKCCGGEDYRDWSKNQYHDCSAPGPLACG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IDFLNDNIRRGIENYYDDLDFKNIMDFVQKKFKCCGGEDYRDWSKNQYHDCSAPGPLACG
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB5 VPYTCCIRNTTEVVNTMCGYKTIDKERFSVQDVIYVRGCTNAVIIWFMDNYTIMAGILLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VPYTCCIRNTTEVVNTMCGYKTIDKERFSVQDVIYVRGCTNAVIIWFMDNYTIMAGILLG
100 110 120 130 140 150
250 260 270 280 290
pF1KB5 ILLPQFLGVLLTLLYITRVEDIIMEHSVTDGLLGPGAKPSVEAAGTGCCLCYPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ILLPQFLGVLLTLLYITRVEDIIMEHSVTDGLLGPGAKPSVEAAGTGCCLCYPN
160 170 180 190 200
>>XP_005269723 (OMIM: 613140) PREDICTED: tetraspanin-15 (229 aa)
initn: 1233 init1: 1233 opt: 1233 Z-score: 1527.3 bits: 290.2 E(85289): 2.5e-78
Smith-Waterman score: 1233; 100.0% identity (100.0% similar) in 175 aa overlap (120-294:55-229)
90 100 110 120 130 140
pF1KB5 YLLQAFMYILGICLIMELIGGVVALTFRNQTIDFLNDNIRRGIENYYDDLDFKNIMDFVQ
::::::::::::::::::::::::::::::
XP_005 SVWHRSRECPLRPQSLLILDLRALKAAIVTTIDFLNDNIRRGIENYYDDLDFKNIMDFVQ
30 40 50 60 70 80
150 160 170 180 190 200
pF1KB5 KKFKCCGGEDYRDWSKNQYHDCSAPGPLACGVPYTCCIRNTTEVVNTMCGYKTIDKERFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KKFKCCGGEDYRDWSKNQYHDCSAPGPLACGVPYTCCIRNTTEVVNTMCGYKTIDKERFS
90 100 110 120 130 140
210 220 230 240 250 260
pF1KB5 VQDVIYVRGCTNAVIIWFMDNYTIMAGILLGILLPQFLGVLLTLLYITRVEDIIMEHSVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VQDVIYVRGCTNAVIIWFMDNYTIMAGILLGILLPQFLGVLLTLLYITRVEDIIMEHSVT
150 160 170 180 190 200
270 280 290
pF1KB5 DGLLGPGAKPSVEAAGTGCCLCYPN
:::::::::::::::::::::::::
XP_005 DGLLGPGAKPSVEAAGTGCCLCYPN
210 220
>>XP_011537865 (OMIM: 613140) PREDICTED: tetraspanin-15 (150 aa)
initn: 1064 init1: 1064 opt: 1064 Z-score: 1321.2 bits: 251.5 E(85289): 7.4e-67
Smith-Waterman score: 1064; 100.0% identity (100.0% similar) in 150 aa overlap (145-294:1-150)
120 130 140 150 160 170
pF1KB5 TFRNQTIDFLNDNIRRGIENYYDDLDFKNIMDFVQKKFKCCGGEDYRDWSKNQYHDCSAP
::::::::::::::::::::::::::::::
XP_011 MDFVQKKFKCCGGEDYRDWSKNQYHDCSAP
10 20 30
180 190 200 210 220 230
pF1KB5 GPLACGVPYTCCIRNTTEVVNTMCGYKTIDKERFSVQDVIYVRGCTNAVIIWFMDNYTIM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GPLACGVPYTCCIRNTTEVVNTMCGYKTIDKERFSVQDVIYVRGCTNAVIIWFMDNYTIM
40 50 60 70 80 90
240 250 260 270 280 290
pF1KB5 AGILLGILLPQFLGVLLTLLYITRVEDIIMEHSVTDGLLGPGAKPSVEAAGTGCCLCYPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AGILLGILLPQFLGVLLTLLYITRVEDIIMEHSVTDGLLGPGAKPSVEAAGTGCCLCYPN
100 110 120 130 140 150
>>XP_016871499 (OMIM: 613140) PREDICTED: tetraspanin-15 (272 aa)
initn: 974 init1: 974 opt: 974 Z-score: 1206.7 bits: 231.2 E(85289): 1.8e-60
Smith-Waterman score: 974; 100.0% identity (100.0% similar) in 151 aa overlap (1-151:1-151)
10 20 30 40 50 60
pF1KB5 MPRGDSEQVRYCARFSYLWLKFSLIIYSTVFWLIGALVLSVGIYAEVERQKYKTLESAFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MPRGDSEQVRYCARFSYLWLKFSLIIYSTVFWLIGALVLSVGIYAEVERQKYKTLESAFL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 APAIILILLGVVMFMVSFIGVLASLRDNLYLLQAFMYILGICLIMELIGGVVALTFRNQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 APAIILILLGVVMFMVSFIGVLASLRDNLYLLQAFMYILGICLIMELIGGVVALTFRNQT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 IDFLNDNIRRGIENYYDDLDFKNIMDFVQKKFKCCGGEDYRDWSKNQYHDCSAPGPLACG
:::::::::::::::::::::::::::::::
XP_016 IDFLNDNIRRGIENYYDDLDFKNIMDFVQKKGPFLSSEQGLGDDGSSSFLLASLSSSAVA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 VPYTCCIRNTTEVVNTMCGYKTIDKERFSVQDVIYVRGCTNAVIIWFMDNYTIMAGILLG
XP_016 GRTTEIGARISTTTAVPLDPWPVGCPTPAASGTRQKLSTPCVATKLSTRRDMDEAGSHHS
190 200 210 220 230 240
>>NP_848657 (OMIM: 610120) tetraspanin-33 [Homo sapiens] (283 aa)
initn: 653 init1: 451 opt: 671 Z-score: 832.7 bits: 162.0 E(85289): 1.2e-39
Smith-Waterman score: 671; 35.8% identity (73.2% similar) in 254 aa overlap (15-263:15-268)
10 20 30 40 50
pF1KB5 MPRGDSEQVRYCARFSYL--WLKFSLIIYSTVFWLIGALVLSVGIYAEVERQKYKTLESA
::.. .:. :.... .::.:. ....::.::.. .. .:
NP_848 MARRPRAPAASGEEFSFVSPLVKYLLFFFNMLFWVISMVMVAVGVYARLMKHAEAALACL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 FLAPAIILILLGVVMFMVSFIGVLASLRDNLYLLQAFMYILGICLIMELIGGVVALTFRN
. :::.::..::.::...: : ..:::.:. :::.: : ....: .:.....: .
NP_848 AVDPAILLIVVGVLMFLLTFCGCIGSLRENICLLQTFSLCLTAVFLLQLAAGILGFVFSD
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 QTIDFLNDNIRRGIENYYDDLDFKNIMDFVQKKFKCCGGEDYRDWSKNQYHDCSAPGPLA
.. ... : .: .: ::::..:..:: ::::.:::: .:.:::.:.: .:: .:
NP_848 KARGKVSEIINNAIVHYRDDLDLQNLIDFGQKKFSCCGGISYKDWSQNMYFNCSEDNPSR
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB5 --CGVPYTCCIRNTTE-VVNTMCGYKTIDKERFSVQDVIYVRGCTNAVIIWFMDNYTIMA
:.:::.::. . . :.::::: . . .. :::. :: . .. :. .: ...
NP_848 ERCSVPYSCCLPTPDQAVINTMCGQGMQAFDYLEASKVIYTNGCIDKLVNWIHSNLFLLG
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB5 GILLGILLPQFLGVLLTLLYITRVEDIIMEHSVTDGLLGPGAKPSVEAAGTGCCLCYPN
:. ::. .::..:.::. . .....: :
NP_848 GVALGLAIPQLVGILLSQILVNQIKDQIKLQLYNQQHRADPWY
250 260 270 280
>>XP_006716023 (OMIM: 610120) PREDICTED: tetraspanin-33 (282 aa)
initn: 628 init1: 375 opt: 661 Z-score: 820.3 bits: 159.7 E(85289): 5.9e-39
Smith-Waterman score: 661; 35.8% identity (73.2% similar) in 254 aa overlap (15-263:15-267)
10 20 30 40 50
pF1KB5 MPRGDSEQVRYCARFSYL--WLKFSLIIYSTVFWLIGALVLSVGIYAEVERQKYKTLESA
::.. .:. :.... .::.:. ....::.::.. .. .:
XP_006 MARRPRAPAASGEEFSFVSPLVKYLLFFFNMLFWVISMVMVAVGVYARLMKHA-AALACL
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 FLAPAIILILLGVVMFMVSFIGVLASLRDNLYLLQAFMYILGICLIMELIGGVVALTFRN
. :::.::..::.::...: : ..:::.:. :::.: : ....: .:.....: .
XP_006 AVDPAILLIVVGVLMFLLTFCGCIGSLRENICLLQTFSLCLTAVFLLQLAAGILGFVFSD
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 QTIDFLNDNIRRGIENYYDDLDFKNIMDFVQKKFKCCGGEDYRDWSKNQYHDCSAPGPLA
.. ... : .: .: ::::..:..:: ::::.:::: .:.:::.:.: .:: .:
XP_006 KARGKVSEIINNAIVHYRDDLDLQNLIDFGQKKFSCCGGISYKDWSQNMYFNCSEDNPSR
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 --CGVPYTCCIRNTTE-VVNTMCGYKTIDKERFSVQDVIYVRGCTNAVIIWFMDNYTIMA
:.:::.::. . . :.::::: . . .. :::. :: . .. :. .: ...
XP_006 ERCSVPYSCCLPTPDQAVINTMCGQGMQAFDYLEASKVIYTNGCIDKLVNWIHSNLFLLG
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 GILLGILLPQFLGVLLTLLYITRVEDIIMEHSVTDGLLGPGAKPSVEAAGTGCCLCYPN
:. ::. .::..:.::. . .....: :
XP_006 GVALGLAIPQLVGILLSQILVNQIKDQIKLQLYNQQHRADPWY
240 250 260 270 280
>>NP_005714 (OMIM: 613136) tetraspanin-5 [Homo sapiens] (268 aa)
initn: 524 init1: 306 opt: 594 Z-score: 738.0 bits: 144.4 E(85289): 2.3e-34
Smith-Waterman score: 594; 35.0% identity (68.9% similar) in 254 aa overlap (20-262:15-264)
10 20 30 40 50
pF1KB5 MPRGDSEQVRYCARFSYLWLKFSLIIYSTVFWLIGALVLSVGIYAEVERQKYKTLESAF-
.:. .. ....::..: :..:..: :. ... :
NP_005 MSGKHYKGPEVSCCIKYFIFGFNVIFWFLGITFLGIGLWAWNEKGVLSNISSITD
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 ---LAPAIILILLGVVMFMVSFIGVLASLRDNLYLLQAFMYILGICLIMELIGGVVALTF
. :. .....: :::...: : ...::.: .::. : .::: ...:: .::.:..:
NP_005 LGGFDPVWLFLVVGGVMFILGFAGCIGALRENTFLLKFFSVFLGIIFFLELTAGVLAFVF
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 RNQTID----FLNDNIRRGIENYYDDLDFKNIMDFVQKKFKCCGGEDYRDWSKNQYHDC-
.. : :.:.::: : ::.:..:..::.:. ..:::. ::. : : .:
NP_005 KDWIKDQLYFFINNNIR----AYRDDIDLQNLIDFTQEYWQCCGAFGADDWNLNIYFNCT
120 130 140 150 160 170
180 190 200 210 220
pF1KB5 -SAPGPLACGVPYTCCIRNTTE-VVNTMCGYKTIDKERFSVQDVIYVRGCTNAVIIWFMD
: . ::::..:: .. .: :.::.::: . .: . . : :::..::. :..:
NP_005 DSNASRERCGVPFSCCTKDPAEDVINTQCGYDARQKPEVDQQIVIYTKGCVPQFEKWLQD
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB5 NYTIMAGILLGILLPQFLGVLLTLLYITRVEDIIMEHSVTDGLLGPGAKPSVEAAGTGCC
: ::.:::..:: : :..:. :. .. .: .
NP_005 NLTIVAGIFIGIALLQIFGICLAQNLVSDIEAVRASW
240 250 260
290
pF1KB5 LCYPN
>>XP_005262737 (OMIM: 613136) PREDICTED: tetraspanin-5 i (219 aa)
initn: 434 init1: 216 opt: 450 Z-score: 561.4 bits: 111.4 E(85289): 1.6e-24
Smith-Waterman score: 450; 38.4% identity (68.4% similar) in 177 aa overlap (93-262:43-215)
70 80 90 100 110 120
pF1KB5 AIILILLGVVMFMVSFIGVLASLRDNLYLLQAFMYILGICLIMELIGGVVALTFRNQTID
. : .::: ...:: .::.:..:.. :
XP_005 CCIKYFIFGFNVIFWFLGITFLGIGLWAWNEKFSVFLGIIFFLELTAGVLAFVFKDWIKD
20 30 40 50 60 70
130 140 150 160 170
pF1KB5 ----FLNDNIRRGIENYYDDLDFKNIMDFVQKKFKCCGGEDYRDWSKNQYHDC--SAPGP
:.:.::: : ::.:..:..::.:. ..:::. ::. : : .: : .
XP_005 QLYFFINNNIR----AYRDDIDLQNLIDFTQEYWQCCGAFGADDWNLNIYFNCTDSNASR
80 90 100 110 120
180 190 200 210 220 230
pF1KB5 LACGVPYTCCIRNTTE-VVNTMCGYKTIDKERFSVQDVIYVRGCTNAVIIWFMDNYTIMA
::::..:: .. .: :.::.::: . .: . . : :::..::. :..:: ::.:
XP_005 ERCGVPFSCCTKDPAEDVINTQCGYDARQKPEVDQQIVIYTKGCVPQFEKWLQDNLTIVA
130 140 150 160 170 180
240 250 260 270 280 290
pF1KB5 GILLGILLPQFLGVLLTLLYITRVEDIIMEHSVTDGLLGPGAKPSVEAAGTGCCLCYPN
::..:: : :..:. :. .. .: .
XP_005 GIFIGIALLQIFGICLAQNLVSDIEAVRASW
190 200 210
294 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 06:15:22 2016 done: Sat Nov 5 06:15:23 2016
Total Scan time: 6.100 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]