Result of FASTA (ccds) for
pF1KB5063
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5063, 775 aa
1>>>pF1KB5063 775 - 775 aa - 775 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.0822+/-0.00103; mu= 15.4219+/- 0.062
mean_var=67.1713+/-13.587, 0's: 0 Z-trim(103.7): 24 B-trim: 248 in 1/50
Lambda= 0.156489
statistics sampled from 7505 (7517) to 7505 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.6), E-opt: 0.2 (0.231), width: 16
Scan time: 3.910
The best scores are: opt bits E(32554)
CCDS2788.1 QARS gene_id:5859|Hs108|chr3 ( 775) 5228 1189.8 0
CCDS63633.1 QARS gene_id:5859|Hs108|chr3 ( 764) 4706 1072.0 0
CCDS31027.1 EPRS gene_id:2058|Hs108|chr1 (1512) 863 204.4 1.1e-51
>>CCDS2788.1 QARS gene_id:5859|Hs108|chr3 (775 aa)
initn: 5228 init1: 5228 opt: 5228 Z-score: 6372.1 bits: 1189.8 E(32554): 0
Smith-Waterman score: 5228; 100.0% identity (100.0% similar) in 775 aa overlap (1-775:1-775)
10 20 30 40 50 60
pF1KB5 MAALDSLSLFTSLGLSEQKARETLKNSALSAQLREAATQAQQTLGSTIDKATGILLYGLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 MAALDSLSLFTSLGLSEQKARETLKNSALSAQLREAATQAQQTLGSTIDKATGILLYGLA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 SRLRDTRRLSFLVSYIASKKIHTEPQLSAALEYVRSHPLDPIDTVDFERECGVGVIVTPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 SRLRDTRRLSFLVSYIASKKIHTEPQLSAALEYVRSHPLDPIDTVDFERECGVGVIVTPE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 QIEEAVEAAINRHRPQLLVERYHFNMGLLMGEARAVLKWADGKMIKNEVDMQVLHLLGPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 QIEEAVEAAINRHRPQLLVERYHFNMGLLMGEARAVLKWADGKMIKNEVDMQVLHLLGPK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 LEADLEKKFKVAKARLEETDRRTAKDVVENGETADQTLSLMEQLRGEALKFHKPGENYKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 LEADLEKKFKVAKARLEETDRRTAKDVVENGETADQTLSLMEQLRGEALKFHKPGENYKT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 PGYVVTPHTMNLLKQHLEITGGQVRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 PGYVVTPHTMNLLKQHLEITGGQVRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 RFDDTNPEKEEAKFFTAICDMVAWLGYTPYKVTYASDYFDQLYAWAVELIRRGLAYVCHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 RFDDTNPEKEEAKFFTAICDMVAWLGYTPYKVTYASDYFDQLYAWAVELIRRGLAYVCHQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 RGEELKGHNTLPSPWRDRPMEESLLLFEAMRKGKFSEGEATLRMKLVMEDGKMDPVAYRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 RGEELKGHNTLPSPWRDRPMEESLLLFEAMRKGKFSEGEATLRMKLVMEDGKMDPVAYRV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 KYTPHHRTGDKWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 KYTPHHRTGDKWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPV
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB5 QWEYGRLNLHYAVVSKRKILQLVATGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 QWEYGRLNLHYAVVSKRKILQLVATGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB5 VTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLESLRVIITNFPAAKSLDIQVPNFPADET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 VTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLESLRVIITNFPAAKSLDIQVPNFPADET
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB5 KGFHQVPFAPIVFIERTDFKEEPEPGFKRLAWGQPVGLRHTGYVIELQHVVKGPSGCVES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 KGFHQVPFAPIVFIERTDFKEEPEPGFKRLAWGQPVGLRHTGYVIELQHVVKGPSGCVES
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB5 LEVTCRRADAGEKPKAFIHWVSQPLMCEVRLYERLFQHKNPEDPTEVPGGFLSDLNLASL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 LEVTCRRADAGEKPKAFIHWVSQPLMCEVRLYERLFQHKNPEDPTEVPGGFLSDLNLASL
670 680 690 700 710 720
730 740 750 760 770
pF1KB5 HVVDAALVDCSVALAKPFDKFQFERLGYFSVDPDSHQGKLVFNRTVTLKEDPGKV
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 HVVDAALVDCSVALAKPFDKFQFERLGYFSVDPDSHQGKLVFNRTVTLKEDPGKV
730 740 750 760 770
>>CCDS63633.1 QARS gene_id:5859|Hs108|chr3 (764 aa)
initn: 4706 init1: 4706 opt: 4706 Z-score: 5735.3 bits: 1072.0 E(32554): 0
Smith-Waterman score: 5123; 98.5% identity (98.6% similar) in 775 aa overlap (1-775:1-764)
10 20 30 40 50 60
pF1KB5 MAALDSLSLFTSLGLSEQKARETLKNSALSAQLREAATQAQQTLGSTIDKATGILLYGLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 MAALDSLSLFTSLGLSEQKARETLKNSALSAQLREAATQAQQTLGSTIDKATGILLYGLA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 SRLRDTRRLSFLVSYIASKKIHTEPQLSAALEYVRSHPLDPIDTVDFERECGVGVIVTPE
:::::::::::::::::. :::::::::::::::::::::::::::::::
CCDS63 SRLRDTRRLSFLVSYIAT-----------ALEYVRSHPLDPIDTVDFERECGVGVIVTPE
70 80 90 100
130 140 150 160 170 180
pF1KB5 QIEEAVEAAINRHRPQLLVERYHFNMGLLMGEARAVLKWADGKMIKNEVDMQVLHLLGPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 QIEEAVEAAINRHRPQLLVERYHFNMGLLMGEARAVLKWADGKMIKNEVDMQVLHLLGPK
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB5 LEADLEKKFKVAKARLEETDRRTAKDVVENGETADQTLSLMEQLRGEALKFHKPGENYKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 LEADLEKKFKVAKARLEETDRRTAKDVVENGETADQTLSLMEQLRGEALKFHKPGENYKT
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB5 PGYVVTPHTMNLLKQHLEITGGQVRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 PGYVVTPHTMNLLKQHLEITGGQVRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB5 RFDDTNPEKEEAKFFTAICDMVAWLGYTPYKVTYASDYFDQLYAWAVELIRRGLAYVCHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 RFDDTNPEKEEAKFFTAICDMVAWLGYTPYKVTYASDYFDQLYAWAVELIRRGLAYVCHQ
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB5 RGEELKGHNTLPSPWRDRPMEESLLLFEAMRKGKFSEGEATLRMKLVMEDGKMDPVAYRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 RGEELKGHNTLPSPWRDRPMEESLLLFEAMRKGKFSEGEATLRMKLVMEDGKMDPVAYRV
350 360 370 380 390 400
430 440 450 460 470 480
pF1KB5 KYTPHHRTGDKWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 KYTPHHRTGDKWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPV
410 420 430 440 450 460
490 500 510 520 530 540
pF1KB5 QWEYGRLNLHYAVVSKRKILQLVATGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 QWEYGRLNLHYAVVSKRKILQLVATGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG
470 480 490 500 510 520
550 560 570 580 590 600
pF1KB5 VTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLESLRVIITNFPAAKSLDIQVPNFPADET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 VTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLESLRVIITNFPAAKSLDIQVPNFPADET
530 540 550 560 570 580
610 620 630 640 650 660
pF1KB5 KGFHQVPFAPIVFIERTDFKEEPEPGFKRLAWGQPVGLRHTGYVIELQHVVKGPSGCVES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 KGFHQVPFAPIVFIERTDFKEEPEPGFKRLAWGQPVGLRHTGYVIELQHVVKGPSGCVES
590 600 610 620 630 640
670 680 690 700 710 720
pF1KB5 LEVTCRRADAGEKPKAFIHWVSQPLMCEVRLYERLFQHKNPEDPTEVPGGFLSDLNLASL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 LEVTCRRADAGEKPKAFIHWVSQPLMCEVRLYERLFQHKNPEDPTEVPGGFLSDLNLASL
650 660 670 680 690 700
730 740 750 760 770
pF1KB5 HVVDAALVDCSVALAKPFDKFQFERLGYFSVDPDSHQGKLVFNRTVTLKEDPGKV
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 HVVDAALVDCSVALAKPFDKFQFERLGYFSVDPDSHQGKLVFNRTVTLKEDPGKV
710 720 730 740 750 760
>>CCDS31027.1 EPRS gene_id:2058|Hs108|chr1 (1512 aa)
initn: 725 init1: 443 opt: 863 Z-score: 1041.3 bits: 204.4 E(32554): 1.1e-51
Smith-Waterman score: 888; 34.5% identity (60.2% similar) in 527 aa overlap (245-752:176-681)
220 230 240 250 260 270
pF1KB5 DQTLSLMEQLRGEALKFHKPGENYKTPGYVVTPHTMNLLKQHLEITG---GQVRTRFPPE
:.:. . . . .:. : :.: .:::::
CCDS31 HVKRWFGFLEAQQAFQSVGTKWDVSTTKARVAPEKKQDVGKFVELPGAEMGKVTVRFPPE
150 160 170 180 190 200
280 290 300 310 320 330
pF1KB5 PNGILHIGHAKAINFNFGYAKANNGICFLRFDDTNPEKEEAKFFTAICDMVAWLGYTPYK
.: :::::::: .: : .: ..::::::::::. : .: . :: : : .
CCDS31 ASGYLHIGHAKAALLNQHYQVNFKGKLIMRFDDTNPEKEKEDFEKVILEDVAMLHIKPDQ
210 220 230 240 250 260
340 350 360 370 380
pF1KB5 VTYASDYFDQLYAWAVELIRRGLAYVCHQRGEELKGH--NTLPSPWRDRPMEESLLLFEA
::.::.:. .. .: .::..: ::: .:..:.. . . : : :.:..: ..:
CCDS31 FTYTSDHFETIMKYAEKLIQEGKAYVDDTPAEQMKAEREQRIDSKHRKNPIEKNLQMWEE
270 280 290 300 310 320
390 400 410 420 430 440
pF1KB5 MRKG-KFSEGEATLRMKLVM--EDGKM-DPVAYRVKYTPHHRTGDKWCIYPTYDYTHCLC
:.:: .:... :: :. : ..: : ::. :: : :: :::.:. .:::::.. .
CCDS31 MKKGSQFGQS-CCLRAKIDMSSNNGCMRDPTLYRCKIQPHPRTGNKYNVYPTYDFACPIV
330 340 350 360 370 380
450 460 470 480 490 500
pF1KB5 DSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPVQWEYGRLNLHYAVVSKRKILQLVAT
:::: .::.: : :.. : ...:. .:: . : :::.::::. .:.::::. .:
CCDS31 DSIEGVTHALRTTEYHDRDEQFYWIIEALGIRKPYIWEYSRLNLNNTVLSKRKLTWFVNE
390 400 410 420 430 440
510 520 530 540 550 560
pF1KB5 GAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVGVTVAQTTMEPHLLEACVRDVLNDTA
: : :::::. :. .. :::. :....: : : . . ..:: . : . :.. .:
CCDS31 GLVDGWDDPRFPTVRGVLRRGMTVEGLKQFIAAQGSSRSVVNMEWDKIWAFNKKVIDPVA
450 460 470 480 490 500
570 580 590 600 610 620
pF1KB5 PRAMAVLESLRVIITNFPAAKSLDIQVPNFPADETKGFHQVPFAPIVFIERTD---FKEE
:: .:.:.. .:: .: : :. .: . : . :.. : ..: :::: .: :.:
CCDS31 PRYVALLKK-EVIPVNVPEAQEEMKEVAKHPKNPEVGLKPVWYSPKVFIEGADAETFSEG
510 520 530 540 550 560
630 640 650 660 670 680
pF1KB5 PEPGFKRLAWGQPVGLRHTGYVIELQHVVKGPSGCVESLEVTCRRADAGEKPKAFIHWVS
: . ::. ... .. :. .: . ::.. . : . . :..
CCDS31 EMVTF--INWGN----------LNITKIHKNADGKIISLDAKLNLENKDYKKTTKVTWLA
570 580 590 600 610
690 700 710 720 730
pF1KB5 Q-------PLMCEVRLYERLFQHKNPEDPTEVPGGFLSDLNLASLHVVDAALVDCSVALA
. :..: . ::.:. : : : . .: : : . : : .
CCDS31 ETTHALPIPVICVT--YEHLIT-KPVLGKDE---DFKQYVNKNSKHE-ELMLGDPCLKDL
620 630 640 650 660
740 750 760 770
pF1KB5 KPFDKFQFERLGYFSVDPDSHQGKLVFNRTVTLKEDPGKV
: : .:..: :.: :
CCDS31 KKGDIIQLQRRGFFICDQPYEPVSPYSCKEAPCVLIYIPDGHTKEMPTSGSKEKTKVEAT
670 680 690 700 710 720
775 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 22:15:01 2016 done: Thu Nov 3 22:15:02 2016
Total Scan time: 3.910 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]