Result of FASTA (omim) for
pF1KB5063
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5063, 775 aa
1>>>pF1KB5063 775 - 775 aa - 775 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8903+/-0.000415; mu= 16.5941+/- 0.026
mean_var=71.5305+/-14.167, 0's: 0 Z-trim(110.5): 38 B-trim: 0 in 0/55
Lambda= 0.151645
statistics sampled from 18792 (18823) to 18792 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.584), E-opt: 0.2 (0.221), width: 16
Scan time: 10.290
The best scores are: opt bits E(85289)
NP_005042 (OMIM: 603727,615760) glutamine--tRNA li ( 775) 5228 1153.8 0
XP_016862454 (OMIM: 603727,615760) PREDICTED: glut ( 751) 4843 1069.5 0
NP_001259002 (OMIM: 603727,615760) glutamine--tRNA ( 764) 4706 1039.6 0
NP_004437 (OMIM: 138295) bifunctional glutamate/pr (1512) 863 198.9 1.3e-49
NP_001077083 (OMIM: 612799,614924) probable glutam ( 523) 161 45.2 0.00087
NP_001295140 (OMIM: 612799,614924) probable glutam ( 534) 161 45.2 0.00089
>>NP_005042 (OMIM: 603727,615760) glutamine--tRNA ligase (775 aa)
initn: 5228 init1: 5228 opt: 5228 Z-score: 6177.3 bits: 1153.8 E(85289): 0
Smith-Waterman score: 5228; 100.0% identity (100.0% similar) in 775 aa overlap (1-775:1-775)
10 20 30 40 50 60
pF1KB5 MAALDSLSLFTSLGLSEQKARETLKNSALSAQLREAATQAQQTLGSTIDKATGILLYGLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MAALDSLSLFTSLGLSEQKARETLKNSALSAQLREAATQAQQTLGSTIDKATGILLYGLA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 SRLRDTRRLSFLVSYIASKKIHTEPQLSAALEYVRSHPLDPIDTVDFERECGVGVIVTPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 SRLRDTRRLSFLVSYIASKKIHTEPQLSAALEYVRSHPLDPIDTVDFERECGVGVIVTPE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 QIEEAVEAAINRHRPQLLVERYHFNMGLLMGEARAVLKWADGKMIKNEVDMQVLHLLGPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 QIEEAVEAAINRHRPQLLVERYHFNMGLLMGEARAVLKWADGKMIKNEVDMQVLHLLGPK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 LEADLEKKFKVAKARLEETDRRTAKDVVENGETADQTLSLMEQLRGEALKFHKPGENYKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LEADLEKKFKVAKARLEETDRRTAKDVVENGETADQTLSLMEQLRGEALKFHKPGENYKT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 PGYVVTPHTMNLLKQHLEITGGQVRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PGYVVTPHTMNLLKQHLEITGGQVRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 RFDDTNPEKEEAKFFTAICDMVAWLGYTPYKVTYASDYFDQLYAWAVELIRRGLAYVCHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 RFDDTNPEKEEAKFFTAICDMVAWLGYTPYKVTYASDYFDQLYAWAVELIRRGLAYVCHQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 RGEELKGHNTLPSPWRDRPMEESLLLFEAMRKGKFSEGEATLRMKLVMEDGKMDPVAYRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 RGEELKGHNTLPSPWRDRPMEESLLLFEAMRKGKFSEGEATLRMKLVMEDGKMDPVAYRV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 KYTPHHRTGDKWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 KYTPHHRTGDKWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPV
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB5 QWEYGRLNLHYAVVSKRKILQLVATGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 QWEYGRLNLHYAVVSKRKILQLVATGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB5 VTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLESLRVIITNFPAAKSLDIQVPNFPADET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 VTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLESLRVIITNFPAAKSLDIQVPNFPADET
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB5 KGFHQVPFAPIVFIERTDFKEEPEPGFKRLAWGQPVGLRHTGYVIELQHVVKGPSGCVES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 KGFHQVPFAPIVFIERTDFKEEPEPGFKRLAWGQPVGLRHTGYVIELQHVVKGPSGCVES
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB5 LEVTCRRADAGEKPKAFIHWVSQPLMCEVRLYERLFQHKNPEDPTEVPGGFLSDLNLASL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LEVTCRRADAGEKPKAFIHWVSQPLMCEVRLYERLFQHKNPEDPTEVPGGFLSDLNLASL
670 680 690 700 710 720
730 740 750 760 770
pF1KB5 HVVDAALVDCSVALAKPFDKFQFERLGYFSVDPDSHQGKLVFNRTVTLKEDPGKV
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 HVVDAALVDCSVALAKPFDKFQFERLGYFSVDPDSHQGKLVFNRTVTLKEDPGKV
730 740 750 760 770
>>XP_016862454 (OMIM: 603727,615760) PREDICTED: glutamin (751 aa)
initn: 4930 init1: 4843 opt: 4843 Z-score: 5722.3 bits: 1069.5 E(85289): 0
Smith-Waterman score: 4850; 94.6% identity (94.6% similar) in 775 aa overlap (1-775:19-751)
10 20 30 40
pF1KB5 MAALDSLSLFTSLGLSEQKARETLKNSALSAQLREAATQAQQ
::::::::::::::::::::::::::::::::::::::::::
XP_016 MPTCRLGPKFLLVSGVSAMAALDSLSLFTSLGLSEQKARETLKNSALSAQLREAATQAQQ
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB5 TLGSTIDKATGILLYGLASRLRDTRRLSFLVSYIASKKIHTEPQLSAALEYVRSHPLDPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLGSTIDKATGILLYGLASRLRDTRRLSFLVSYIASKKIHTEPQLSAALEYVRSHPLDPI
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB5 DTVDFERECGVGVIVTPEQIEEAVEAAINRHRPQLLVERYHFNMGLLMGEARAVLKWADG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DTVDFERECGVGVIVTPEQIEEAVEAAINRHRPQLLVERYHFNMGLLMGEARAVLKWADG
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB5 KMIKNEVDMQVLHLLGPKLEADLEKKFKVAKARLEETDRRTAKDVVENGETADQTLSLME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KMIKNEVDMQVLHLLGPKLEADLEKKFKVAKARLEETDRRTAKDVVENGETADQTLSLME
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB5 QLRGEALKFHKPGENYKTPGYVVTPHTMNLLKQHLEITGGQVRTRFPPEPNGILHIGHAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QLRGEALKFHKPGENYKTPGYVVTPHTMNLLKQHLEITGGQVRTRFPPEPNGILHIGHAK
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB5 AINFNFGYAKANNGICFLRFDDTNPEKEEAKFFTAICDMVAWLGYTPYKVTYASDYFDQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AINFNFGYAKANNGICFLRFDDTNPEKEEAKFFTAICDMVAWLGYTPYKVTYASDYFDQL
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB5 YAWAVELIRRGLAYVCHQRGEELKGHNTLPSPWRDRPMEESLLLFEAMRKGKFSEGEATL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YAWAVELIRRGLAYVCHQRGEELKGHNTLPSPWRDRPMEESLLLFEAMRKGKFSEGEATL
370 380 390 400 410 420
410 420 430 440 450 460
pF1KB5 RMKLVMEDGKMDPVAYRVKYTPHHRTGDKWCIYPTYDYTHCLCDSIEHITHSLCTKEFQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RMKLVMEDGKMDPVAYRVKYTPHHRTGDKWCIYPTYDYTHCLCDSIEHITHSLCTKEFQA
430 440 450 460 470 480
470 480 490 500 510 520
pF1KB5 RRSSYFWLCNALDVYCPVQWEYGRLNLHYAVVSKRKILQLVATGAVRDWDDPRLFTLTAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RRSSYFWLCNALDVYCPVQWEYGRLNLHYAVVSKRKILQLVATGAVRDWDDPRLFTLTAL
490 500 510 520 530 540
530 540 550 560 570 580
pF1KB5 RRRGFPPEAINNFCARVGVTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLESLRVIITNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RRRGFPPEAINNFCARVGVTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLESLRVIITNF
550 560 570 580 590 600
590 600 610 620 630 640
pF1KB5 PAAKSLDIQVPNFPADETKGFHQVPFAPIVFIERTDFKEEPEPGFKRLAWGQPVGLRHTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PAAKSLDIQVPNFPADETKGFHQVPFAPIVFIERTDFKEEPEPGFKRLAWGQPVGLRHTG
610 620 630 640 650 660
650 660 670 680 690 700
pF1KB5 YVIELQHVVKGPSGCVESLEVTCRRADAGEKPKAFIHWVSQPLMCEVRLYERLFQHKNPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YVIELQHVVKGPSGCVESLEVTCRRADAGEKPKAFIHWVSQPLMCEVRLYERLFQHKNPE
670 680 690 700 710 720
710 720 730 740 750 760
pF1KB5 DPTEVPGGFLSDLNLASLHVVDAALVDCSVALAKPFDKFQFERLGYFSVDPDSHQGKLVF
::::::::::::::: :::
XP_016 DPTEVPGGFLSDLNL------------------------------------------LVF
730
770
pF1KB5 NRTVTLKEDPGKV
:::::::::::::
XP_016 NRTVTLKEDPGKV
740 750
>>NP_001259002 (OMIM: 603727,615760) glutamine--tRNA lig (764 aa)
initn: 4706 init1: 4706 opt: 4706 Z-score: 5560.2 bits: 1039.6 E(85289): 0
Smith-Waterman score: 5123; 98.5% identity (98.6% similar) in 775 aa overlap (1-775:1-764)
10 20 30 40 50 60
pF1KB5 MAALDSLSLFTSLGLSEQKARETLKNSALSAQLREAATQAQQTLGSTIDKATGILLYGLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAALDSLSLFTSLGLSEQKARETLKNSALSAQLREAATQAQQTLGSTIDKATGILLYGLA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 SRLRDTRRLSFLVSYIASKKIHTEPQLSAALEYVRSHPLDPIDTVDFERECGVGVIVTPE
:::::::::::::::::. :::::::::::::::::::::::::::::::
NP_001 SRLRDTRRLSFLVSYIAT-----------ALEYVRSHPLDPIDTVDFERECGVGVIVTPE
70 80 90 100
130 140 150 160 170 180
pF1KB5 QIEEAVEAAINRHRPQLLVERYHFNMGLLMGEARAVLKWADGKMIKNEVDMQVLHLLGPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QIEEAVEAAINRHRPQLLVERYHFNMGLLMGEARAVLKWADGKMIKNEVDMQVLHLLGPK
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB5 LEADLEKKFKVAKARLEETDRRTAKDVVENGETADQTLSLMEQLRGEALKFHKPGENYKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LEADLEKKFKVAKARLEETDRRTAKDVVENGETADQTLSLMEQLRGEALKFHKPGENYKT
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB5 PGYVVTPHTMNLLKQHLEITGGQVRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PGYVVTPHTMNLLKQHLEITGGQVRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB5 RFDDTNPEKEEAKFFTAICDMVAWLGYTPYKVTYASDYFDQLYAWAVELIRRGLAYVCHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RFDDTNPEKEEAKFFTAICDMVAWLGYTPYKVTYASDYFDQLYAWAVELIRRGLAYVCHQ
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB5 RGEELKGHNTLPSPWRDRPMEESLLLFEAMRKGKFSEGEATLRMKLVMEDGKMDPVAYRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RGEELKGHNTLPSPWRDRPMEESLLLFEAMRKGKFSEGEATLRMKLVMEDGKMDPVAYRV
350 360 370 380 390 400
430 440 450 460 470 480
pF1KB5 KYTPHHRTGDKWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KYTPHHRTGDKWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPV
410 420 430 440 450 460
490 500 510 520 530 540
pF1KB5 QWEYGRLNLHYAVVSKRKILQLVATGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QWEYGRLNLHYAVVSKRKILQLVATGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG
470 480 490 500 510 520
550 560 570 580 590 600
pF1KB5 VTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLESLRVIITNFPAAKSLDIQVPNFPADET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLESLRVIITNFPAAKSLDIQVPNFPADET
530 540 550 560 570 580
610 620 630 640 650 660
pF1KB5 KGFHQVPFAPIVFIERTDFKEEPEPGFKRLAWGQPVGLRHTGYVIELQHVVKGPSGCVES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGFHQVPFAPIVFIERTDFKEEPEPGFKRLAWGQPVGLRHTGYVIELQHVVKGPSGCVES
590 600 610 620 630 640
670 680 690 700 710 720
pF1KB5 LEVTCRRADAGEKPKAFIHWVSQPLMCEVRLYERLFQHKNPEDPTEVPGGFLSDLNLASL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LEVTCRRADAGEKPKAFIHWVSQPLMCEVRLYERLFQHKNPEDPTEVPGGFLSDLNLASL
650 660 670 680 690 700
730 740 750 760 770
pF1KB5 HVVDAALVDCSVALAKPFDKFQFERLGYFSVDPDSHQGKLVFNRTVTLKEDPGKV
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HVVDAALVDCSVALAKPFDKFQFERLGYFSVDPDSHQGKLVFNRTVTLKEDPGKV
710 720 730 740 750 760
>>NP_004437 (OMIM: 138295) bifunctional glutamate/prolin (1512 aa)
initn: 725 init1: 443 opt: 863 Z-score: 1011.6 bits: 198.9 E(85289): 1.3e-49
Smith-Waterman score: 888; 34.5% identity (60.2% similar) in 527 aa overlap (245-752:176-681)
220 230 240 250 260 270
pF1KB5 DQTLSLMEQLRGEALKFHKPGENYKTPGYVVTPHTMNLLKQHLEITG---GQVRTRFPPE
:.:. . . . .:. : :.: .:::::
NP_004 HVKRWFGFLEAQQAFQSVGTKWDVSTTKARVAPEKKQDVGKFVELPGAEMGKVTVRFPPE
150 160 170 180 190 200
280 290 300 310 320 330
pF1KB5 PNGILHIGHAKAINFNFGYAKANNGICFLRFDDTNPEKEEAKFFTAICDMVAWLGYTPYK
.: :::::::: .: : .: ..::::::::::. : .: . :: : : .
NP_004 ASGYLHIGHAKAALLNQHYQVNFKGKLIMRFDDTNPEKEKEDFEKVILEDVAMLHIKPDQ
210 220 230 240 250 260
340 350 360 370 380
pF1KB5 VTYASDYFDQLYAWAVELIRRGLAYVCHQRGEELKGH--NTLPSPWRDRPMEESLLLFEA
::.::.:. .. .: .::..: ::: .:..:.. . . : : :.:..: ..:
NP_004 FTYTSDHFETIMKYAEKLIQEGKAYVDDTPAEQMKAEREQRIDSKHRKNPIEKNLQMWEE
270 280 290 300 310 320
390 400 410 420 430 440
pF1KB5 MRKG-KFSEGEATLRMKLVM--EDGKM-DPVAYRVKYTPHHRTGDKWCIYPTYDYTHCLC
:.:: .:... :: :. : ..: : ::. :: : :: :::.:. .:::::.. .
NP_004 MKKGSQFGQS-CCLRAKIDMSSNNGCMRDPTLYRCKIQPHPRTGNKYNVYPTYDFACPIV
330 340 350 360 370 380
450 460 470 480 490 500
pF1KB5 DSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPVQWEYGRLNLHYAVVSKRKILQLVAT
:::: .::.: : :.. : ...:. .:: . : :::.::::. .:.::::. .:
NP_004 DSIEGVTHALRTTEYHDRDEQFYWIIEALGIRKPYIWEYSRLNLNNTVLSKRKLTWFVNE
390 400 410 420 430 440
510 520 530 540 550 560
pF1KB5 GAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVGVTVAQTTMEPHLLEACVRDVLNDTA
: : :::::. :. .. :::. :....: : : . . ..:: . : . :.. .:
NP_004 GLVDGWDDPRFPTVRGVLRRGMTVEGLKQFIAAQGSSRSVVNMEWDKIWAFNKKVIDPVA
450 460 470 480 490 500
570 580 590 600 610 620
pF1KB5 PRAMAVLESLRVIITNFPAAKSLDIQVPNFPADETKGFHQVPFAPIVFIERTD---FKEE
:: .:.:.. .:: .: : :. .: . : . :.. : ..: :::: .: :.:
NP_004 PRYVALLKK-EVIPVNVPEAQEEMKEVAKHPKNPEVGLKPVWYSPKVFIEGADAETFSEG
510 520 530 540 550 560
630 640 650 660 670 680
pF1KB5 PEPGFKRLAWGQPVGLRHTGYVIELQHVVKGPSGCVESLEVTCRRADAGEKPKAFIHWVS
: . ::. ... .. :. .: . ::.. . : . . :..
NP_004 EMVTF--INWGN----------LNITKIHKNADGKIISLDAKLNLENKDYKKTTKVTWLA
570 580 590 600 610
690 700 710 720 730
pF1KB5 Q-------PLMCEVRLYERLFQHKNPEDPTEVPGGFLSDLNLASLHVVDAALVDCSVALA
. :..: . ::.:. : : : . .: : : . : : .
NP_004 ETTHALPIPVICVT--YEHLIT-KPVLGKDE---DFKQYVNKNSKHE-ELMLGDPCLKDL
620 630 640 650 660
740 750 760 770
pF1KB5 KPFDKFQFERLGYFSVDPDSHQGKLVFNRTVTLKEDPGKV
: : .:..: :.: :
NP_004 KKGDIIQLQRRGFFICDQPYEPVSPYSCKEAPCVLIYIPDGHTKEMPTSGSKEKTKVEAT
670 680 690 700 710 720
>>NP_001077083 (OMIM: 612799,614924) probable glutamate- (523 aa)
initn: 158 init1: 158 opt: 161 Z-score: 188.9 bits: 45.2 E(85289): 0.00087
Smith-Waterman score: 209; 28.1% identity (51.2% similar) in 242 aa overlap (261-479:34-269)
240 250 260 270 280 290
pF1KB5 FHKPGENYKTPGYVVTPHTMNLLKQHLEITGGQVRTRFPPEPNGILHIGHAKAINFNFGY
: ::.:: : :.:.::.: .. .:. .
NP_001 LLRRLLQRERPSAASGRPVGRREANLGTDAGVAVRVRFAPSPTGFLHLGGLRTALYNYIF
10 20 30 40 50 60
300 310 320 330 340
pF1KB5 AKANNGICFLRFDDTNPEKEEAKFFTAICDMVAWLGY----TPYKVTYASDYFD----QL
:: .: .::..::. . : ::. : : .: . :. : . .:
NP_001 AKKYQGSFILRLEDTDQTRVVPGAAENIEDMLEWAGIPPDESPRRGGPAGPYQQSQRLEL
70 80 90 100 110 120
350 360 370 380 390
pF1KB5 YAWAVE-LIRRGLAYVCH---QR-----GEELKGHNTLPSPWRDRPMEESLLLFEAMRKG
:: :.: :.. : :: : :: : :..:.: : : : . . :.. .
NP_001 YAQATEALLKTGAAYPCFCSPQRLELLKKEALRNHQTPRYDNRCRNMSQEQV---AQKLA
130 140 150 160 170 180
400 410 420 430 440
pF1KB5 KFSEGEATLRMKLVMEDGKMDPVAYRVKYTPHHRTGDKWCI----YPTYDYTHCLCDSIE
: . .:.. :. . .: : .. :: . .::: . :. :. .
NP_001 KDPKPAIRFRLEQVVP-AFQDLVYGWNRHEVASVEGDPVIMKSDGFPTY-HLACVVDD-H
190 200 210 220 230
450 460 470 480 490 500
pF1KB5 H--ITHSLCTKEFQARRSSYFWLCNALDVYCPVQWEYGRLNLHYAVVSKRKILQLVATGA
: :.: : .:. . .... : .:: :
NP_001 HMGISHVLRGSEWLVSTAKHLLLYQALGWQPPHFAHLPLLLNRDGSKLSKRQGDVFLEHF
240 250 260 270 280 290
510 520 530 540 550 560
pF1KB5 VRDWDDPRLFTLTALRRRGFPPEAINNFCARVGVTVAQTTMEPHLLEACVRDVLNDTAPR
NP_001 AADGFLPDSLLDIITNCGSGFAENQMGRTLPELITQFNLTQVTCHSALLDLEKLPEFNRL
300 310 320 330 340 350
>>NP_001295140 (OMIM: 612799,614924) probable glutamate- (534 aa)
initn: 158 init1: 158 opt: 161 Z-score: 188.8 bits: 45.2 E(85289): 0.00089
Smith-Waterman score: 209; 28.1% identity (51.2% similar) in 242 aa overlap (261-479:34-269)
240 250 260 270 280 290
pF1KB5 FHKPGENYKTPGYVVTPHTMNLLKQHLEITGGQVRTRFPPEPNGILHIGHAKAINFNFGY
: ::.:: : :.:.::.: .. .:. .
NP_001 LLRRLLQRERPSAASGRPVGRREANLGTDAGVAVRVRFAPSPTGFLHLGGLRTALYNYIF
10 20 30 40 50 60
300 310 320 330 340
pF1KB5 AKANNGICFLRFDDTNPEKEEAKFFTAICDMVAWLGY----TPYKVTYASDYFD----QL
:: .: .::..::. . : ::. : : .: . :. : . .:
NP_001 AKKYQGSFILRLEDTDQTRVVPGAAENIEDMLEWAGIPPDESPRRGGPAGPYQQSQRLEL
70 80 90 100 110 120
350 360 370 380 390
pF1KB5 YAWAVE-LIRRGLAYVCH---QR-----GEELKGHNTLPSPWRDRPMEESLLLFEAMRKG
:: :.: :.. : :: : :: : :..:.: : : : . . :.. .
NP_001 YAQATEALLKTGAAYPCFCSPQRLELLKKEALRNHQTPRYDNRCRNMSQEQV---AQKLA
130 140 150 160 170 180
400 410 420 430 440
pF1KB5 KFSEGEATLRMKLVMEDGKMDPVAYRVKYTPHHRTGDKWCI----YPTYDYTHCLCDSIE
: . .:.. :. . .: : .. :: . .::: . :. :. .
NP_001 KDPKPAIRFRLEQVVP-AFQDLVYGWNRHEVASVEGDPVIMKSDGFPTY-HLACVVDD-H
190 200 210 220 230
450 460 470 480 490 500
pF1KB5 H--ITHSLCTKEFQARRSSYFWLCNALDVYCPVQWEYGRLNLHYAVVSKRKILQLVATGA
: :.: : .:. . .... : .:: :
NP_001 HMGISHVLRGSEWLVSTAKHLLLYQALGWQPPHFAHLPLLLNRDGSKLSKRQGDVFLEHF
240 250 260 270 280 290
510 520 530 540 550 560
pF1KB5 VRDWDDPRLFTLTALRRRGFPPEAINNFCARVGVTVAQTTMEPHLLEACVRDVLNDTAPR
NP_001 AADGFLPDSLLDIITNCGSGFAENQMGRTLPELITQFNLTQVTCHSALLDLEKLPEFNRL
300 310 320 330 340 350
775 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 22:15:02 2016 done: Thu Nov 3 22:15:03 2016
Total Scan time: 10.290 Total Display time: 0.100
Function used was FASTA [36.3.4 Apr, 2011]