(Circular) (Six-base) MAPSORT of: pF1KB5098.seq Check: 495 from: 1 to: 6587 pF1KB5098 6587 bp With 182 enzymes: SgfI * June 20, 2008 10:24 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 2805 2805 Size: 6587 AccI GT'mk_AC Cuts at: 1742 3625 1742 Size: 1883 4704 Acc65I G'GTAC_C Cuts at: 3603 3603 Size: 6587 AclI AA'CG_TT Cuts at: 6427 6427 Size: 6587 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 1144 1524 2673 4412 4844 5591 5859 1144 Size: 380 1149 1739 432 747 268 1872 Fragments arranged by size: 1872 1739 1149 747 432 380 268 AflIII A'CryG_T Cuts at: 2061 3939 5043 6020 2061 Size: 1878 1104 977 2628 Fragments arranged by size: 2628 1878 1104 977 AgeI A'CCGG_T Cuts at: 1369 4975 1369 Size: 3606 2981 AleI CACnn'nnGTG Cuts at: 1624 3370 1624 Size: 1746 4841 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 1388 2008 2092 1388 Size: 620 84 5883 Fragments arranged by size: 5883 620 84 AloI GAACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 1942 1974 1942 Size: 32 6555 AlwNI CAG_nnn'CTG Cuts at: 2031 2460 3892 5459 2031 Size: 429 1432 1567 3159 Fragments arranged by size: 3159 1567 1432 429 ApaLI G'TGCA_C Cuts at: 2818 5357 2818 Size: 2539 4048 ApoI r'AATT_y Cuts at: 3591 5940 6196 3591 Size: 2349 256 3982 Fragments arranged by size: 3982 2349 256 AseI AT'TA_AT Cuts at: 20 2897 20 Size: 2877 3710 AsiSI GCG_AT'CGC Cuts at: 104 104 Size: 6587 AvaI C'yCGr_G Cuts at: 220 254 286 679 904 1954 2483 2949 2991 Size: 34 32 393 225 1050 529 466 42 Cuts at: 2991 3403 3427 3475 3607 220 Size: 412 24 48 132 3200 Fragments arranged by size: 3200 1050 529 466 412 393 225 132 48 42 34 32 24 AvrII C'CTAG_G Cuts at: 3237 3237 Size: 6587 BamHI G'GATC_C Cuts at: 1976 3612 1976 Size: 1636 4951 BanI G'GyrC_C Cuts at: 126 176 420 705 860 1372 1796 2100 3215 Size: 50 244 285 155 512 424 304 1115 Cuts at: 3215 3603 4017 4265 4300 126 Size: 388 414 248 35 2413 Fragments arranged by size: 2413 1115 512 424 414 388 304 285 248 244 155 50 35 BanII G_rGCy'C Cuts at: 254 293 926 1208 1640 1888 1955 2149 2594 Size: 39 633 282 432 248 67 194 445 Cuts at: 2594 2720 3308 3404 3428 3601 4631 254 Size: 126 588 96 24 173 1030 2210 Fragments arranged by size: 2210 1030 633 588 445 432 282 248 194 173 126 96 67 39 24 BbeI G_GCGC'C Cuts at: 130 180 709 864 3219 4021 4269 130 Size: 50 529 155 2355 802 248 2448 Fragments arranged by size: 2448 2355 802 529 248 155 50 BbsI GAAGACnn'nnnn_ Cuts at: 2917 2917 Size: 6587 BbvCI CC'TCA_GC Cuts at: 2243 2243 Size: 6587 BcgI CGAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 1402 1436 2622 2656 1402 Size: 34 1186 34 5333 Fragments arranged by size: 5333 1186 34 34 BciVI GTATCCnnnnn_n' Cuts at: 2337 2424 4485 5246 6587 2337 Size: 87 2061 761 1341 2337 Fragments arranged by size: 2337 2061 1341 761 87 BclI T'GATC_A Cuts at: 4107 4107 Size: 6587 BglI GCCn_nnn'nGGC Cuts at: 112 112 Size: 6587 BglII A'GATC_T Cuts at: 1901 1916 4102 6139 1901 Size: 15 2186 2037 2349 Fragments arranged by size: 2349 2186 2037 15 BlpI GC'TnA_GC Cuts at: 136 1091 3699 136 Size: 955 2608 3024 Fragments arranged by size: 3024 2608 955 Bme1580I G_kGCm'C Cuts at: 169 425 1344 1852 2105 2822 3201 4212 4305 Size: 256 919 508 253 717 379 1011 93 Cuts at: 4305 5361 169 Size: 1056 1395 Fragments arranged by size: 1395 1056 1011 919 717 508 379 256 253 93 BmgBI CAC'GTC Cuts at: 267 267 Size: 6587 BmrI ACTGGGnnnn_n' Cuts at: 1425 1954 2172 3435 3799 3880 4215 6359 1425 Size: 529 218 1263 364 81 335 2144 1653 Fragments arranged by size: 2144 1653 1263 529 364 335 218 81 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 4954 4954 Size: 6587 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 191 664 1482 1732 2510 2734 191 Size: 473 818 250 778 224 4044 Fragments arranged by size: 4044 818 778 473 250 224 Bpu10I CC'TnA_GC Cuts at: 248 773 2243 3289 248 Size: 525 1470 1046 3546 Fragments arranged by size: 3546 1470 1046 525 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 1882 3763 4642 5134 5432 1882 Size: 1881 879 492 298 3037 Fragments arranged by size: 3037 1881 879 492 298 BsaI GGTCTCn'nnnn_ Cuts at: 736 781 1156 2511 3352 3430 3454 3547 6291 Size: 45 375 1355 841 78 24 93 2744 Cuts at: 6291 736 Size: 1032 Fragments arranged by size: 2744 1355 1032 841 375 93 78 45 24 BsaAI yAC'GTr Cuts at: 1026 2062 3940 1026 Size: 1036 1878 3673 Fragments arranged by size: 3673 1878 1036 BsaBI GATnn'nnATC Cuts at: 6 4101 6138 6 Size: 4095 2037 455 Fragments arranged by size: 4095 2037 455 BsaHI Gr'CG_yC Cuts at: 127 177 706 861 1240 1475 3156 3171 3216 Size: 50 529 155 379 235 1681 15 45 Cuts at: 3216 4018 4266 4968 6464 127 Size: 802 248 702 1496 250 Fragments arranged by size: 1681 1496 802 702 529 379 250 248 235 155 50 45 15 BsaWI w'CCGG_w Cuts at: 366 1369 2543 3776 4297 4975 5249 5396 5807 Size: 1003 1174 1233 521 678 274 147 411 Cuts at: 5807 366 Size: 1146 Fragments arranged by size: 1233 1174 1146 1003 678 521 411 274 147 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 1219 1249 1942 1972 2491 2521 3240 3270 3391 Size: 30 693 30 519 30 719 30 121 Cuts at: 3391 3415 3421 3439 3445 3469 1219 Size: 24 6 18 6 24 4337 Fragments arranged by size: 4337 719 693 519 121 30 30 30 30 24 24 18 6 6 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 226 697 754 796 799 912 946 973 1058 Size: 471 57 42 3 113 34 27 85 Cuts at: 1058 1132 1174 1234 1243 1246 1305 1858 2200 Size: 74 42 60 9 3 59 553 342 Cuts at: 2200 2260 3505 3508 3511 3514 3523 3526 226 Size: 60 1245 3 3 3 9 3 3287 Fragments arranged by size: 3287 1245 553 471 342 113 85 74 60 60 59 57 42 42 34 27 9 9 3 3 3 3 3 3 BseYI C'CCAG_C Cuts at: 667 948 1719 1972 1995 2169 2379 3338 3464 Size: 281 771 253 23 174 210 959 126 Cuts at: 3464 4012 4770 5347 5843 667 Size: 548 758 577 496 1411 Fragments arranged by size: 1411 959 771 758 577 548 496 281 253 210 174 126 23 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 2098 2098 Size: 6587 BsiEI CG_ry'CG Cuts at: 104 116 353 1353 4129 4175 5383 104 Size: 12 237 1000 2776 46 1208 1308 Fragments arranged by size: 2776 1308 1208 1000 237 46 12 BsiHKAI G_wGCw'C Cuts at: 767 1640 1729 1888 2234 2720 2822 3295 3601 Size: 873 89 159 346 486 102 473 306 Cuts at: 3601 4379 4569 5361 767 Size: 778 190 792 1993 Fragments arranged by size: 1993 873 792 778 486 473 346 306 190 159 102 89 BsmI GAATG_Cn' Cuts at: 3532 3532 Size: 6587 Bsp1286I G_dGCh'C Cuts at: 169 254 293 425 767 926 1208 1344 1640 Size: 85 39 132 342 159 282 136 296 Cuts at: 1640 1729 1852 1888 1955 2105 2149 2234 2594 Size: 89 123 36 67 150 44 85 360 Cuts at: 2594 2720 2822 3201 3295 3308 3404 3428 3601 Size: 126 102 379 94 13 96 24 173 Cuts at: 3601 4212 4305 4379 4569 4631 5361 169 Size: 611 93 74 190 62 730 1395 Fragments arranged by size: 1395 730 611 379 360 342 296 282 190 173 159 150 136 132 126 123 102 96 94 93 89 85 85 74 67 62 44 39 36 24 13 BspEI T'CCGG_A Cuts at: 366 5807 366 Size: 5441 1146 BspHI T'CATG_A Cuts at: 1826 2751 5763 1826 Size: 925 3012 2650 Fragments arranged by size: 3012 2650 925 BspMI ACCTGCnnnn'nnnn_ Cuts at: 2705 2805 3013 3637 3851 4153 4534 2705 Size: 100 208 624 214 302 381 4758 Fragments arranged by size: 4758 624 381 302 214 208 100 BsrBI CCG'CTC Cuts at: 50 909 2406 4879 4933 6417 6582 50 Size: 859 1497 2473 54 1484 165 55 Fragments arranged by size: 2473 1497 1484 859 165 55 54 BsrDI GCAATG_nn' Cuts at: 1551 2348 2864 3015 4499 1551 Size: 797 516 151 1484 3639 Fragments arranged by size: 3639 1484 797 516 151 BsrFI r'CCGG_y Cuts at: 1352 1369 1647 2626 3104 4585 4766 4975 1352 Size: 17 278 979 478 1481 181 209 2964 Fragments arranged by size: 2964 1481 979 478 278 209 181 17 BsrGI T'GTAC_A Cuts at: 1568 1568 Size: 6587 BssSI C'ACGA_G Cuts at: 1889 4858 5216 1889 Size: 2969 358 3260 Fragments arranged by size: 3260 2969 358 BstAPI GCAn_nnn'nTGC Cuts at: 189 1700 3964 189 Size: 1511 2264 2812 Fragments arranged by size: 2812 2264 1511 BstBI TT'CG_AA Cuts at: 4948 4948 Size: 6587 BstXI CCAn_nnnn'nTGG Cuts at: 1275 1685 2712 1275 Size: 410 1027 5150 Fragments arranged by size: 5150 1027 410 BstYI r'GATC_y Cuts at: 1 1304 1901 1916 1976 2217 3612 4079 4102 Size: 1303 597 15 60 241 1395 467 23 Cuts at: 4102 4437 4683 5695 5781 5793 6139 1 Size: 335 246 1012 86 12 346 449 Fragments arranged by size: 1395 1303 1012 597 467 449 346 335 246 241 86 60 23 15 12 Bsu36I CC'TnA_GG Cuts at: 515 929 515 Size: 414 6173 BtgI C'CryG_G Cuts at: 107 298 1329 1910 1980 2321 2330 2471 2598 Size: 191 1031 581 70 341 9 141 127 Cuts at: 2598 2823 107 Size: 225 3871 Fragments arranged by size: 3871 1031 581 341 225 191 141 127 70 9 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 2063 3113 4537 4718 4881 2063 Size: 1050 1424 181 163 3769 Fragments arranged by size: 3769 1424 1050 181 163 BtsI GCAGTG_nn' Cuts at: 652 1184 1967 3830 652 Size: 532 783 1863 3409 Fragments arranged by size: 3409 1863 783 532 DraI TTT'AAA Cuts at: 3586 3586 Size: 6587 DraIII CAC_nnn'GTG Cuts at: 2100 2907 3038 3252 2100 Size: 807 131 214 5435 Fragments arranged by size: 5435 807 214 131 DrdI GACnn_nn'nnGTC Cuts at: 4293 5151 4293 Size: 858 5729 EaeI y'GGCC_r Cuts at: 113 340 350 649 916 1350 1772 2462 3089 Size: 227 10 299 267 434 422 690 627 Cuts at: 3089 3525 4172 4346 4737 4764 6109 113 Size: 436 647 174 391 27 1345 591 Fragments arranged by size: 1345 690 647 627 591 436 434 422 391 299 267 227 174 27 10 EagI C'GGCC_G Cuts at: 113 350 1350 4172 113 Size: 237 1000 2822 2528 Fragments arranged by size: 2822 2528 1000 237 EarI CTCTTCn'nnn_ Cuts at: 604 1103 3482 3500 4610 4820 604 Size: 499 2379 18 1110 210 2371 Fragments arranged by size: 2379 2371 1110 499 210 18 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 1061 4795 5105 5251 6397 1061 Size: 3734 310 146 1146 1251 Fragments arranged by size: 3734 1251 1146 310 146 EcoICRI GAG'CTC Cuts at: 1638 1886 2718 3599 1638 Size: 248 832 881 4626 Fragments arranged by size: 4626 881 832 248 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 191 664 1144 1482 1524 1732 2510 2673 2734 Size: 473 480 338 42 208 778 163 61 Cuts at: 2734 4412 4844 5591 5859 191 Size: 1678 432 747 268 919 Fragments arranged by size: 1678 919 778 747 480 473 432 338 268 208 163 61 42 EcoNI CCTnn'n_nnAGG Cuts at: 2077 2077 Size: 6587 EcoO109I rG'GnC_Cy Cuts at: 273 412 443 614 939 1427 2259 2271 3241 Size: 139 31 171 325 488 832 12 970 Cuts at: 3241 3312 3726 273 Size: 71 414 3134 Fragments arranged by size: 3134 970 832 488 414 325 171 139 71 31 12 EcoRI G'AATT_C Cuts at: 3591 3591 Size: 6587 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 450 2388 4606 450 Size: 1938 2218 2431 Fragments arranged by size: 2431 2218 1938 FspI TGC'GCA Cuts at: 2068 4368 2068 Size: 2300 4287 HaeII r_GCGC'y Cuts at: 130 180 709 864 1098 2170 2797 2999 3219 Size: 50 529 155 234 1072 627 202 220 Cuts at: 3219 4021 4269 5291 6270 130 Size: 802 248 1022 979 447 Fragments arranged by size: 1072 1022 979 802 627 529 447 248 234 220 202 155 50 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 957 989 2209 2241 2491 2523 4429 4459 4461 Size: 32 1220 32 250 32 1906 30 2 Cuts at: 4461 4491 957 Size: 30 3053 Fragments arranged by size: 3053 1906 1220 250 32 32 32 30 30 2 HincII GTy'rAC Cuts at: 2646 3015 3626 2646 Size: 369 611 5607 Fragments arranged by size: 5607 611 369 KasI G'GCGC_C Cuts at: 126 176 705 860 3215 4017 4265 126 Size: 50 529 155 2355 802 248 2448 Fragments arranged by size: 2448 2355 802 529 248 155 50 KpnI G_GTAC'C Cuts at: 3607 3607 Size: 6587 MluI A'CGCG_T Cuts at: 6020 6020 Size: 6587 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 1205 3086 3329 3425 5258 5442 1205 Size: 1881 243 96 1833 184 2350 Fragments arranged by size: 2350 1881 1833 243 184 96 MscI TGG'CCA Cuts at: 651 918 1774 3091 3527 4348 651 Size: 267 856 1317 436 821 2890 Fragments arranged by size: 2890 1317 856 821 436 267 MslI CAynn'nnrTG Cuts at: 1273 1624 1831 2756 2806 2884 3091 3370 4576 Size: 351 207 925 50 78 207 279 1206 Cuts at: 4576 4703 1273 Size: 127 3157 Fragments arranged by size: 3157 1206 925 351 279 207 207 127 78 50 MspA1I CmG'CkG Cuts at: 140 300 999 2457 2600 2825 3334 3468 3698 Size: 160 699 1458 143 225 509 134 230 Cuts at: 3698 4012 4372 5385 5630 140 Size: 314 360 1013 245 1097 Fragments arranged by size: 1458 1097 1013 699 509 360 314 245 230 225 160 143 134 NaeI GCC'GGC Cuts at: 1354 4768 1354 Size: 3414 3173 NarI GG'CG_CC Cuts at: 127 177 706 861 3216 4018 4266 127 Size: 50 529 155 2355 802 248 2448 Fragments arranged by size: 2448 2355 802 529 248 155 50 NcoI C'CATG_G Cuts at: 107 1910 1980 2471 107 Size: 1803 70 491 4223 Fragments arranged by size: 4223 1803 491 70 NgoMIV G'CCGG_C Cuts at: 1352 4766 1352 Size: 3414 3173 NspI r_CATG'y Cuts at: 1365 1707 1818 3640 4140 5047 1365 Size: 342 111 1822 500 907 2905 Fragments arranged by size: 2905 1822 907 500 342 111 PasI CC'CwG_GG Cuts at: 1485 1930 3308 1485 Size: 445 1378 4764 Fragments arranged by size: 4764 1378 445 PciI A'CATG_T Cuts at: 5043 5043 Size: 6587 PflMI CCAn_nnn'nTGG Cuts at: 1335 1335 Size: 6587 PfoI T'CCnGG_A Cuts at: 732 2213 3077 732 Size: 1481 864 4242 Fragments arranged by size: 4242 1481 864 PmeI GTTT'AAAC Cuts at: 3586 3586 Size: 6587 PmlI CAC'GTG Cuts at: 2062 2062 Size: 6587 PpiI GAACnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 1942 1974 5726 5758 1942 Size: 32 3752 32 2771 Fragments arranged by size: 3752 2771 32 32 PpuMI rG'GwC_Cy Cuts at: 443 1427 2259 2271 443 Size: 984 832 12 4759 Fragments arranged by size: 4759 984 832 12 PspXI vC'TCGA_Gb Cuts at: 220 220 Size: 6587 PstI C_TGCA'G Cuts at: 3164 3634 4319 3164 Size: 470 685 5432 Fragments arranged by size: 5432 685 470 PvuI CG_AT'CG Cuts at: 104 104 Size: 6587 PvuII CAG'CTG Cuts at: 140 2457 3468 4012 4372 140 Size: 2317 1011 544 360 2355 Fragments arranged by size: 2355 2317 1011 544 360 RsrII CG'GwC_CG Cuts at: 2669 4782 2669 Size: 2113 4474 SacI G_AGCT'C Cuts at: 1640 1888 2720 3601 1640 Size: 248 832 881 4626 Fragments arranged by size: 4626 881 832 248 SacII CC_GC'GG Cuts at: 301 2601 2826 301 Size: 2300 225 4062 Fragments arranged by size: 4062 2300 225 SalI G'TCGA_C Cuts at: 3624 3624 Size: 6587 SanDI GG'GwC_CC Cuts at: 443 2259 2271 443 Size: 1816 12 4759 Fragments arranged by size: 4759 1816 12 SapI GCTCTTCn'nnn_ Cuts at: 4610 4820 4610 Size: 210 6377 SbfI CC_TGCA'GG Cuts at: 3634 3634 Size: 6587 ScaI AGT'ACT Cuts at: 6104 6104 Size: 6587 SexAI A'CCwGG_T Cuts at: 2096 2096 Size: 6587 SfcI C'TryA_G Cuts at: 33 1743 3160 3630 4315 5308 5499 33 Size: 1710 1417 470 685 993 191 1121 Fragments arranged by size: 1710 1417 1121 993 685 470 191 SfoI GGC'GCC Cuts at: 128 178 707 862 3217 4019 4267 128 Size: 50 529 155 2355 802 248 2448 Fragments arranged by size: 2448 2355 802 529 248 155 50 SgfI GCG_AT'CGC Cuts at: 104 104 Size: 6587 SgrAI Cr'CCGG_yG Cuts at: 2626 2626 Size: 6587 SmaI CCC'GGG Cuts at: 256 2485 2951 3609 256 Size: 2229 466 658 3234 Fragments arranged by size: 3234 2229 658 466 SmlI C'TyrA_G Cuts at: 220 1897 3742 4657 5149 5411 220 Size: 1677 1845 915 492 262 1396 Fragments arranged by size: 1845 1677 1396 915 492 262 SpeI A'CTAG_T Cuts at: 67 67 Size: 6587 SphI G_CATG'C Cuts at: 1707 3640 4140 1707 Size: 1933 500 4154 Fragments arranged by size: 4154 1933 500 StuI AGG'CCT Cuts at: 1895 1895 Size: 6587 StyI C'CwwG_G Cuts at: 107 416 425 434 482 500 533 548 581 Size: 309 9 9 48 18 33 15 33 Cuts at: 581 1154 1910 1980 2471 3237 3416 3721 4075 Size: 573 756 70 491 766 179 305 354 Cuts at: 4075 107 Size: 2619 Fragments arranged by size: 2619 766 756 573 491 354 309 305 179 70 48 33 33 18 15 9 9 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 211 495 561 594 805 1180 1498 1551 2602 Size: 284 66 33 211 375 318 53 1051 Cuts at: 2602 3406 4170 4303 4762 4971 211 Size: 804 764 133 459 209 1827 Fragments arranged by size: 1827 1051 804 764 459 375 318 284 211 209 133 66 53 33 TatI w'GTAC_w Cuts at: 851 1568 6102 851 Size: 717 4534 1336 Fragments arranged by size: 4534 1336 717 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 1219 1251 2046 2078 3240 3272 6104 6136 1219 Size: 32 795 32 1162 32 2832 32 1670 Fragments arranged by size: 2832 1670 1162 795 32 32 32 32 Tth111I GACn'n_nGTC Cuts at: 2503 4384 2503 Size: 1881 4706 XbaI T'CTAG_A Cuts at: 3618 3618 Size: 6587 XcmI CCAnnnn_n'nnnnTGG Cuts at: 432 1530 1782 4082 432 Size: 1098 252 2300 2937 Fragments arranged by size: 2937 2300 1098 252 XhoI C'TCGA_G Cuts at: 220 220 Size: 6587 XmaI C'CCGG_G Cuts at: 254 2483 2949 3607 254 Size: 2229 466 658 3234 Fragments arranged by size: 3234 2229 658 466 XmnI GAAnn'nnTTC Cuts at: 2371 2371 Size: 6587 Enzymes that do cut: AarI AccI Acc65I AclI AcuI AflIII AgeI AleI AlfI AloI AlwNI ApaLI ApoI AseI AsiSI AvaI AvrII BamHI BanI BanII BbeI BbsI BbvCI BcgI BciVI BclI BglI BglII BlpI Bme1580I BmgBI BmrI BplI BpmI Bpu10I BpuEI BsaI BsaAI BsaBI BsaHI BsaWI BsaXI BseRI BseYI BsgI BsiEI BsiHKAI BsmI Bsp1286I BspEI BspHI BspMI BsrBI BsrDI BsrFI BsrGI BssSI BstAPI BstBI BstXI BstYI Bsu36I BtgI BtgZI BtsI DraI DraIII DrdI EaeI EagI EarI EciI EcoICRI Eco57MI EcoNI EcoO109I EcoRI FalI FspI HaeII Hin4I HincII KasI KpnI MluI MmeI MscI MslI MspA1I NaeI NarI NcoI NgoMIV NspI PasI PciI PflMI PfoI PmeI PmlI PpiI PpuMI PspXI PstI PvuI PvuII RsrII SacI SacII SalI SanDI SapI SbfI ScaI SexAI SfcI SfoI SgfI SgrAI SmaI SmlI SpeI SphI StuI StyI TaqII TatI TstI Tth111I XbaI XcmI XhoI XmaI XmnI Enzymes that do not cut: AatII AfeI AflII AhdI ApaI AscI BaeI BfrBI BmtI BsiWI BsmBI BssHII BstEII BstZ17I ClaI CspCI EcoRV FseI FspAI HindIII HpaI MfeI NdeI NheI NotI NruI NsiI PacI PshAI PsiI PspOMI PsrI SfiI SnaBI SrfI SspI SwaI ZraI