Result of FASTA (omim) for
pF1KB5177
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5177, 217 aa
1>>>pF1KB5177 217 - 217 aa - 217 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1737+/-0.000348; mu= 15.2177+/- 0.022
mean_var=76.3283+/-15.220, 0's: 0 Z-trim(115.1): 113 B-trim: 0 in 0/52
Lambda= 0.146802
statistics sampled from 25296 (25413) to 25296 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.684), E-opt: 0.2 (0.298), width: 16
Scan time: 6.080
The best scores are: opt bits E(85289)
NP_036330 (OMIM: 607030) grancalcin isoform b [Hom ( 217) 1477 321.8 5.4e-88
XP_005246503 (OMIM: 607030) PREDICTED: grancalcin ( 233) 1427 311.2 8.8e-85
NP_001317197 (OMIM: 607030) grancalcin isoform c [ ( 243) 1419 309.6 2.9e-84
NP_001317196 (OMIM: 607030) grancalcin isoform a [ ( 232) 1407 307.0 1.7e-83
NP_001317195 (OMIM: 607030) grancalcin isoform a [ ( 232) 1407 307.0 1.7e-83
NP_001317194 (OMIM: 607030) grancalcin isoform a [ ( 232) 1407 307.0 1.7e-83
XP_006712461 (OMIM: 607030) PREDICTED: grancalcin ( 259) 1369 299.0 4.7e-81
XP_006712463 (OMIM: 607030) PREDICTED: grancalcin ( 248) 1357 296.4 2.7e-80
NP_001317199 (OMIM: 607030) grancalcin isoform d [ ( 198) 1336 291.9 4.9e-79
NP_001317200 (OMIM: 607030) grancalcin isoform d [ ( 198) 1336 291.9 4.9e-79
XP_011509228 (OMIM: 607030) PREDICTED: grancalcin ( 214) 1286 281.3 8e-76
XP_016859256 (OMIM: 607030) PREDICTED: grancalcin ( 214) 1286 281.3 8e-76
NP_003121 (OMIM: 182520) sorcin isoform A [Homo sa ( 198) 807 179.9 2.6e-45
NP_944490 (OMIM: 182520) sorcin isoform B [Homo sa ( 183) 800 178.4 6.9e-45
NP_001243820 (OMIM: 182520) sorcin isoform C [Homo ( 195) 781 174.4 1.2e-43
XP_011509230 (OMIM: 607030) PREDICTED: grancalcin ( 137) 773 172.5 2.9e-43
NP_001243821 (OMIM: 182520) sorcin isoform D [Homo ( 180) 774 172.8 3.1e-43
XP_011514830 (OMIM: 182520) PREDICTED: sorcin isof ( 155) 738 165.2 5.5e-41
XP_016859258 (OMIM: 607030) PREDICTED: grancalcin ( 132) 644 145.2 4.8e-35
XP_011540048 (OMIM: 610033) PREDICTED: peflin isof ( 214) 397 93.1 3.8e-19
XP_011540049 (OMIM: 610033) PREDICTED: peflin isof ( 214) 397 93.1 3.8e-19
XP_016857169 (OMIM: 610033) PREDICTED: peflin isof ( 214) 397 93.1 3.8e-19
XP_011540047 (OMIM: 610033) PREDICTED: peflin isof ( 279) 397 93.2 4.7e-19
NP_036524 (OMIM: 610033) peflin [Homo sapiens] ( 284) 397 93.2 4.8e-19
XP_016857170 (OMIM: 610033) PREDICTED: peflin isof ( 184) 367 86.7 2.8e-17
NP_037364 (OMIM: 601057) programmed cell death pro ( 191) 364 86.0 4.5e-17
NP_001254485 (OMIM: 601057) programmed cell death ( 189) 355 84.1 1.7e-16
NP_775111 (OMIM: 114240,253600) calpain-3 isoform ( 309) 350 83.2 5e-16
NP_001289561 (OMIM: 114170) calpain small subunit ( 268) 348 82.8 6.1e-16
NP_001740 (OMIM: 114170) calpain small subunit 1 i ( 268) 348 82.8 6.1e-16
NP_001003962 (OMIM: 114170) calpain small subunit ( 268) 348 82.8 6.1e-16
NP_775110 (OMIM: 114240,253600) calpain-3 isoform ( 729) 350 83.5 9.6e-16
NP_077320 (OMIM: 114240,253600) calpain-3 isoform ( 815) 350 83.6 1.1e-15
NP_000061 (OMIM: 114240,253600) calpain-3 isoform ( 821) 350 83.6 1.1e-15
NP_115706 (OMIM: 616767) calpain small subunit 2 [ ( 248) 343 81.7 1.2e-15
NP_008989 (OMIM: 604822) calpain-11 [Homo sapiens] ( 739) 347 82.9 1.5e-15
XP_006715047 (OMIM: 604822) PREDICTED: calpain-11 ( 740) 347 82.9 1.5e-15
XP_011512577 (OMIM: 604822) PREDICTED: calpain-11 ( 743) 347 82.9 1.5e-15
XP_011512576 (OMIM: 604822) PREDICTED: calpain-11 ( 744) 347 82.9 1.5e-15
XP_011525661 (OMIM: 114170) PREDICTED: calpain sma ( 200) 340 81.0 1.6e-15
XP_005259353 (OMIM: 114170) PREDICTED: calpain sma ( 322) 331 79.2 8.4e-15
XP_005259352 (OMIM: 114170) PREDICTED: calpain sma ( 322) 331 79.2 8.4e-15
NP_001139540 (OMIM: 114230) calpain-2 catalytic su ( 622) 324 78.0 3.9e-14
NP_001739 (OMIM: 114230) calpain-2 catalytic subun ( 700) 324 78.0 4.3e-14
XP_006715048 (OMIM: 604822) PREDICTED: calpain-11 ( 724) 321 77.4 6.8e-14
XP_016855588 (OMIM: 606401) PREDICTED: calpain-9 i ( 495) 315 76.0 1.2e-13
NP_001289562 (OMIM: 114170) calpain small subunit ( 156) 308 74.1 1.4e-13
NP_001306605 (OMIM: 606401) calpain-9 isoform 3 [H ( 627) 315 76.1 1.5e-13
NP_057536 (OMIM: 606401) calpain-9 isoform 2 [Homo ( 664) 315 76.1 1.5e-13
NP_006606 (OMIM: 606401) calpain-9 isoform 1 [Homo ( 690) 315 76.1 1.6e-13
>>NP_036330 (OMIM: 607030) grancalcin isoform b [Homo sa (217 aa)
initn: 1477 init1: 1477 opt: 1477 Z-score: 1700.8 bits: 321.8 E(85289): 5.4e-88
Smith-Waterman score: 1477; 99.5% identity (100.0% similar) in 217 aa overlap (1-217:1-217)
10 20 30 40 50 60
pF1KB5 MAYPGYGGGFGNFSIQVPGMQMGQPVPETGPAILLDGYSGPAYSDTYSSAGDSVYTYFSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 MAYPGYGGGFGNFSIQVPGMQMGQPVPETGPAILLDGYSGPAYSDTYSSAGDSVYTYFSA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 VAGQDGEVDAEELQRCLTQAGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAA
:::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::
NP_036 VAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGRIFFDDYVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGRIFFDDYVA
130 140 150 160 170 180
190 200 210
pF1KB5 CCVKLRALTDFFRKRDHLQQGSANFIYDDFLQGTMAI
:::::::::::::::::::::::::::::::::::::
NP_036 CCVKLRALTDFFRKRDHLQQGSANFIYDDFLQGTMAI
190 200 210
>>XP_005246503 (OMIM: 607030) PREDICTED: grancalcin isof (233 aa)
initn: 1427 init1: 1427 opt: 1427 Z-score: 1643.1 bits: 311.2 E(85289): 8.8e-85
Smith-Waterman score: 1427; 99.5% identity (100.0% similar) in 209 aa overlap (1-209:1-209)
10 20 30 40 50 60
pF1KB5 MAYPGYGGGFGNFSIQVPGMQMGQPVPETGPAILLDGYSGPAYSDTYSSAGDSVYTYFSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MAYPGYGGGFGNFSIQVPGMQMGQPVPETGPAILLDGYSGPAYSDTYSSAGDSVYTYFSA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 VAGQDGEVDAEELQRCLTQAGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAA
:::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::
XP_005 VAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGRIFFDDYVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGRIFFDDYVA
130 140 150 160 170 180
190 200 210
pF1KB5 CCVKLRALTDFFRKRDHLQQGSANFIYDDFLQGTMAI
:::::::::::::::::::::::::::::
XP_005 CCVKLRALTDFFRKRDHLQQGSANFIYDDCGGMNVINFEHLDTERPESVCKSD
190 200 210 220 230
>>NP_001317197 (OMIM: 607030) grancalcin isoform c [Homo (243 aa)
initn: 1407 init1: 1407 opt: 1419 Z-score: 1633.7 bits: 309.6 E(85289): 2.9e-84
Smith-Waterman score: 1419; 97.7% identity (98.6% similar) in 215 aa overlap (6-217:29-243)
10 20 30
pF1KB5 MAYPGYGGGF---GNFSIQVPGMQMGQPVPETGPAIL
.:::: ::::::::::::::::::::::::
NP_001 MWRRQEEVLPKINLTSCGFPNTNLFPWEFGGGFEKFGNFSIQVPGMQMGQPVPETGPAIL
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB5 LDGYSGPAYSDTYSSAGDSVYTYFSAVAGQDGEVDAEELQRCLTQAGINGTYSPFSLETC
:::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::
NP_001 LDGYSGPAYSDTYSSAGDSVYTYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETC
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB5 RIMIAMLDRDHTGKMGFNAFKELWAALNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RIMIAMLDRDHTGKMGFNAFKELWAALNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYR
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB5 LSPQTLTTIVKRYSKNGRIFFDDYVACCVKLRALTDFFRKRDHLQQGSANFIYDDFLQGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSPQTLTTIVKRYSKNGRIFFDDYVACCVKLRALTDFFRKRDHLQQGSANFIYDDFLQGT
190 200 210 220 230 240
pF1KB5 MAI
:::
NP_001 MAI
>>NP_001317196 (OMIM: 607030) grancalcin isoform a [Homo (232 aa)
initn: 1407 init1: 1407 opt: 1407 Z-score: 1620.2 bits: 307.0 E(85289): 1.7e-83
Smith-Waterman score: 1407; 99.5% identity (100.0% similar) in 208 aa overlap (10-217:25-232)
10 20 30 40
pF1KB5 MAYPGYGGGFGNFSIQVPGMQMGQPVPETGPAILLDGYSGPAYSD
::::::::::::::::::::::::::::::::::::
NP_001 MWMDLNHQLSLEGSQDLKFPRSQLFGNFSIQVPGMQMGQPVPETGPAILLDGYSGPAYSD
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB5 TYSSAGDSVYTYFSAVAGQDGEVDAEELQRCLTQAGINGTYSPFSLETCRIMIAMLDRDH
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
NP_001 TYSSAGDSVYTYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDH
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB5 TGKMGFNAFKELWAALNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TGKMGFNAFKELWAALNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVK
130 140 150 160 170 180
170 180 190 200 210
pF1KB5 RYSKNGRIFFDDYVACCVKLRALTDFFRKRDHLQQGSANFIYDDFLQGTMAI
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RYSKNGRIFFDDYVACCVKLRALTDFFRKRDHLQQGSANFIYDDFLQGTMAI
190 200 210 220 230
>>NP_001317195 (OMIM: 607030) grancalcin isoform a [Homo (232 aa)
initn: 1407 init1: 1407 opt: 1407 Z-score: 1620.2 bits: 307.0 E(85289): 1.7e-83
Smith-Waterman score: 1407; 99.5% identity (100.0% similar) in 208 aa overlap (10-217:25-232)
10 20 30 40
pF1KB5 MAYPGYGGGFGNFSIQVPGMQMGQPVPETGPAILLDGYSGPAYSD
::::::::::::::::::::::::::::::::::::
NP_001 MWMDLNHQLSLEGSQDLKFPRSQLFGNFSIQVPGMQMGQPVPETGPAILLDGYSGPAYSD
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB5 TYSSAGDSVYTYFSAVAGQDGEVDAEELQRCLTQAGINGTYSPFSLETCRIMIAMLDRDH
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
NP_001 TYSSAGDSVYTYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDH
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB5 TGKMGFNAFKELWAALNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TGKMGFNAFKELWAALNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVK
130 140 150 160 170 180
170 180 190 200 210
pF1KB5 RYSKNGRIFFDDYVACCVKLRALTDFFRKRDHLQQGSANFIYDDFLQGTMAI
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RYSKNGRIFFDDYVACCVKLRALTDFFRKRDHLQQGSANFIYDDFLQGTMAI
190 200 210 220 230
>>NP_001317194 (OMIM: 607030) grancalcin isoform a [Homo (232 aa)
initn: 1407 init1: 1407 opt: 1407 Z-score: 1620.2 bits: 307.0 E(85289): 1.7e-83
Smith-Waterman score: 1407; 99.5% identity (100.0% similar) in 208 aa overlap (10-217:25-232)
10 20 30 40
pF1KB5 MAYPGYGGGFGNFSIQVPGMQMGQPVPETGPAILLDGYSGPAYSD
::::::::::::::::::::::::::::::::::::
NP_001 MWMDLNHQLSLEGSQDLKFPRSQLFGNFSIQVPGMQMGQPVPETGPAILLDGYSGPAYSD
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB5 TYSSAGDSVYTYFSAVAGQDGEVDAEELQRCLTQAGINGTYSPFSLETCRIMIAMLDRDH
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
NP_001 TYSSAGDSVYTYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDH
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB5 TGKMGFNAFKELWAALNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TGKMGFNAFKELWAALNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVK
130 140 150 160 170 180
170 180 190 200 210
pF1KB5 RYSKNGRIFFDDYVACCVKLRALTDFFRKRDHLQQGSANFIYDDFLQGTMAI
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RYSKNGRIFFDDYVACCVKLRALTDFFRKRDHLQQGSANFIYDDFLQGTMAI
190 200 210 220 230
>>XP_006712461 (OMIM: 607030) PREDICTED: grancalcin isof (259 aa)
initn: 1357 init1: 1357 opt: 1369 Z-score: 1576.1 bits: 299.0 E(85289): 4.7e-81
Smith-Waterman score: 1369; 97.6% identity (98.6% similar) in 207 aa overlap (6-209:29-235)
10 20 30
pF1KB5 MAYPGYGGGF---GNFSIQVPGMQMGQPVPETGPAIL
.:::: ::::::::::::::::::::::::
XP_006 MWRRQEEVLPKINLTSCGFPNTNLFPWEFGGGFEKFGNFSIQVPGMQMGQPVPETGPAIL
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB5 LDGYSGPAYSDTYSSAGDSVYTYFSAVAGQDGEVDAEELQRCLTQAGINGTYSPFSLETC
:::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::
XP_006 LDGYSGPAYSDTYSSAGDSVYTYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETC
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB5 RIMIAMLDRDHTGKMGFNAFKELWAALNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RIMIAMLDRDHTGKMGFNAFKELWAALNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYR
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB5 LSPQTLTTIVKRYSKNGRIFFDDYVACCVKLRALTDFFRKRDHLQQGSANFIYDDFLQGT
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LSPQTLTTIVKRYSKNGRIFFDDYVACCVKLRALTDFFRKRDHLQQGSANFIYDDCGGMN
190 200 210 220 230 240
pF1KB5 MAI
XP_006 VINFEHLDTERPESVCKSD
250
>>XP_006712463 (OMIM: 607030) PREDICTED: grancalcin isof (248 aa)
initn: 1357 init1: 1357 opt: 1357 Z-score: 1562.6 bits: 296.4 E(85289): 2.7e-80
Smith-Waterman score: 1357; 99.5% identity (100.0% similar) in 200 aa overlap (10-209:25-224)
10 20 30 40
pF1KB5 MAYPGYGGGFGNFSIQVPGMQMGQPVPETGPAILLDGYSGPAYSD
::::::::::::::::::::::::::::::::::::
XP_006 MWMDLNHQLSLEGSQDLKFPRSQLFGNFSIQVPGMQMGQPVPETGPAILLDGYSGPAYSD
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB5 TYSSAGDSVYTYFSAVAGQDGEVDAEELQRCLTQAGINGTYSPFSLETCRIMIAMLDRDH
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
XP_006 TYSSAGDSVYTYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDH
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB5 TGKMGFNAFKELWAALNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TGKMGFNAFKELWAALNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVK
130 140 150 160 170 180
170 180 190 200 210
pF1KB5 RYSKNGRIFFDDYVACCVKLRALTDFFRKRDHLQQGSANFIYDDFLQGTMAI
::::::::::::::::::::::::::::::::::::::::::::
XP_006 RYSKNGRIFFDDYVACCVKLRALTDFFRKRDHLQQGSANFIYDDCGGMNVINFEHLDTER
190 200 210 220 230 240
XP_006 PESVCKSD
>>NP_001317199 (OMIM: 607030) grancalcin isoform d [Homo (198 aa)
initn: 1336 init1: 1336 opt: 1336 Z-score: 1539.9 bits: 291.9 E(85289): 4.9e-79
Smith-Waterman score: 1336; 99.5% identity (100.0% similar) in 198 aa overlap (20-217:1-198)
10 20 30 40 50 60
pF1KB5 MAYPGYGGGFGNFSIQVPGMQMGQPVPETGPAILLDGYSGPAYSDTYSSAGDSVYTYFSA
:::::::::::::::::::::::::::::::::::::::::
NP_001 MQMGQPVPETGPAILLDGYSGPAYSDTYSSAGDSVYTYFSA
10 20 30 40
70 80 90 100 110 120
pF1KB5 VAGQDGEVDAEELQRCLTQAGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAA
:::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::
NP_001 VAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAA
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB5 LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGRIFFDDYVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGRIFFDDYVA
110 120 130 140 150 160
190 200 210
pF1KB5 CCVKLRALTDFFRKRDHLQQGSANFIYDDFLQGTMAI
:::::::::::::::::::::::::::::::::::::
NP_001 CCVKLRALTDFFRKRDHLQQGSANFIYDDFLQGTMAI
170 180 190
>>NP_001317200 (OMIM: 607030) grancalcin isoform d [Homo (198 aa)
initn: 1336 init1: 1336 opt: 1336 Z-score: 1539.9 bits: 291.9 E(85289): 4.9e-79
Smith-Waterman score: 1336; 99.5% identity (100.0% similar) in 198 aa overlap (20-217:1-198)
10 20 30 40 50 60
pF1KB5 MAYPGYGGGFGNFSIQVPGMQMGQPVPETGPAILLDGYSGPAYSDTYSSAGDSVYTYFSA
:::::::::::::::::::::::::::::::::::::::::
NP_001 MQMGQPVPETGPAILLDGYSGPAYSDTYSSAGDSVYTYFSA
10 20 30 40
70 80 90 100 110 120
pF1KB5 VAGQDGEVDAEELQRCLTQAGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAA
:::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::
NP_001 VAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAA
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB5 LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGRIFFDDYVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGRIFFDDYVA
110 120 130 140 150 160
190 200 210
pF1KB5 CCVKLRALTDFFRKRDHLQQGSANFIYDDFLQGTMAI
:::::::::::::::::::::::::::::::::::::
NP_001 CCVKLRALTDFFRKRDHLQQGSANFIYDDFLQGTMAI
170 180 190
217 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 06:23:15 2016 done: Sat Nov 5 06:23:16 2016
Total Scan time: 6.080 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]